AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene005419

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene005419.t1 MTR_1g085770 66.007 303 37 7 1 243 1 297 3.40e-113 330
MS.gene005419.t1 MTR_1g085880 88.442 199 16 3 1 197 1 194 8.07e-109 315
MS.gene005419.t1 MTR_5g088080 56.250 240 74 7 12 229 13 243 1.77e-78 240
MS.gene005419.t1 MTR_5g088150 56.250 240 74 7 12 229 13 243 1.77e-78 240
MS.gene005419.t1 MTR_5g488210 56.250 240 74 7 12 229 13 243 1.77e-78 240
MS.gene005419.t1 MTR_5g088640 52.768 271 90 9 12 252 13 275 1.10e-77 238
MS.gene005419.t1 MTR_5g062790 50.175 285 81 9 12 244 10 285 2.52e-76 236
MS.gene005419.t1 MTR_5g488170 55.804 224 71 5 12 215 13 228 9.76e-75 230
MS.gene005419.t1 MTR_5g088610 66.995 203 39 4 3 198 4 185 1.11e-74 233
MS.gene005419.t1 MTR_4g128190 47.177 248 97 9 1 230 1 232 9.09e-61 194
MS.gene005419.t1 MTR_8g042410 39.698 199 99 6 11 190 37 233 2.23e-38 142
MS.gene005419.t1 MTR_1g021230 45.000 160 82 3 11 166 57 214 3.67e-38 140
MS.gene005419.t1 MTR_1g083630 43.386 189 93 4 10 186 11 197 7.95e-38 142
MS.gene005419.t1 MTR_3g052430 54.167 120 53 2 11 130 41 158 5.25e-37 139
MS.gene005419.t1 MTR_3g052450 54.310 116 51 2 11 126 40 153 5.67e-36 136
MS.gene005419.t1 MTR_3g011610 50.833 120 57 2 11 130 37 154 1.24e-35 135
MS.gene005419.t1 MTR_4g091490 52.066 121 55 3 8 127 10 128 2.27e-35 131
MS.gene005419.t1 MTR_2g011660 52.991 117 52 3 8 123 10 124 1.14e-34 129
MS.gene005419.t1 MTR_2g089620 52.294 109 50 2 17 124 17 124 3.26e-34 127
MS.gene005419.t1 MTR_1g017000 35.160 219 113 8 9 207 10 219 4.15e-34 125
MS.gene005419.t1 MTR_2g088170 55.963 109 47 1 17 125 34 141 6.99e-34 129
MS.gene005419.t1 MTR_1g085040 50.413 121 57 3 4 123 5 123 8.53e-34 127
MS.gene005419.t1 MTR_4g065017 54.128 109 48 2 7 115 13 119 1.29e-33 126
MS.gene005419.t1 MTR_7g110830 45.098 153 78 5 4 154 5 153 1.47e-33 127
MS.gene005419.t1 MTR_1g076150 54.286 105 46 2 11 115 12 114 2.47e-33 123
MS.gene005419.t1 MTR_8g017440 49.194 124 59 4 4 125 5 126 6.78e-33 124
MS.gene005419.t1 MTR_5g029840 55.556 99 43 1 17 115 17 114 7.00e-33 124
MS.gene005419.t1 MTR_7g076740 50.427 117 54 4 9 123 10 124 2.04e-32 122
MS.gene005419.t1 MTR_7g115650 42.537 134 68 2 17 142 17 149 2.35e-32 119
MS.gene005419.t1 MTR_1g085640 49.587 121 58 3 4 123 5 123 2.54e-32 124
MS.gene005419.t1 MTR_5g007370 46.565 131 62 4 11 135 12 140 2.91e-32 122
MS.gene005419.t1 MTR_3g077110 48.031 127 58 4 9 129 10 134 3.66e-32 122
MS.gene005419.t1 MTR_7g111290 53.271 107 48 2 4 110 5 109 3.67e-32 123
MS.gene005419.t1 MTR_2g097910 54.000 100 45 1 16 115 24 122 3.78e-32 122
MS.gene005419.t1 MTR_1g100653 48.571 105 53 1 17 121 17 120 4.32e-32 121
MS.gene005419.t1 MTR_1g112760 47.934 121 60 3 4 123 6 124 4.89e-32 119
MS.gene005419.t1 MTR_3g461490 51.376 109 51 2 17 124 17 124 5.29e-32 122
MS.gene005419.t1 MTR_8g095390 46.774 124 64 2 1 123 1 123 7.45e-32 121
MS.gene005419.t1 MTR_4g105130 40.964 166 92 5 4 167 5 166 7.97e-32 122
MS.gene005419.t1 MTR_2g064160 43.662 142 72 4 1 141 1 135 9.67e-32 120
MS.gene005419.t1 MTR_1g043080 50.467 107 51 2 9 115 10 114 1.03e-31 119
MS.gene005419.t1 MTR_3g028740 50.000 110 53 2 6 115 17 124 1.35e-31 121
MS.gene005419.t1 MTR_3g074520 48.696 115 56 3 11 124 12 124 1.47e-31 121
MS.gene005419.t1 MTR_0008s0390 42.647 136 69 3 11 146 13 139 2.13e-31 119
MS.gene005419.t1 MTR_4g478180 49.565 115 55 3 11 124 13 125 2.59e-31 120
MS.gene005419.t1 MTR_1g017140 54.000 100 44 2 17 115 17 115 3.92e-31 119
MS.gene005419.t1 MTR_4g121460 41.290 155 79 4 11 155 12 164 4.19e-31 119
MS.gene005419.t1 MTR_5g014990 53.000 100 45 2 17 115 17 115 4.64e-31 119
MS.gene005419.t1 MTR_7g102110 46.400 125 62 3 17 137 17 140 4.71e-31 118
MS.gene005419.t1 MTR_4g073420 45.161 124 66 2 1 123 1 123 6.71e-31 117
MS.gene005419.t1 MTR_8g098860 47.826 115 58 2 4 118 5 117 7.85e-31 118
MS.gene005419.t1 MTR_1g110460 37.234 188 108 5 17 201 31 211 8.62e-31 118
MS.gene005419.t1 MTR_1g043050 50.467 107 51 2 9 115 10 114 9.48e-31 116
MS.gene005419.t1 MTR_3g103570 44.526 137 70 3 17 148 17 152 9.83e-31 119
MS.gene005419.t1 MTR_2g099740 47.107 121 61 3 4 123 5 123 1.05e-30 119
MS.gene005419.t1 MTR_2g089450 50.476 105 50 2 11 115 12 114 1.15e-30 116
MS.gene005419.t1 MTR_5g079670 40.278 144 79 4 13 152 12 152 1.16e-30 115
MS.gene005419.t1 MTR_4g057635 54.000 100 44 2 17 115 17 115 1.25e-30 118
MS.gene005419.t1 MTR_4g097570 55.789 95 40 2 17 110 17 110 1.29e-30 117
MS.gene005419.t1 MTR_0251s0050 46.789 109 56 2 11 119 13 119 1.32e-30 117
MS.gene005419.t1 MTR_8g017500 46.281 121 62 3 4 123 5 123 1.40e-30 118
MS.gene005419.t1 MTR_5g010020 49.074 108 53 2 4 111 5 110 1.41e-30 118
MS.gene005419.t1 MTR_6g006030 47.788 113 58 1 17 129 19 130 1.47e-30 115
MS.gene005419.t1 MTR_7g035075 51.000 100 48 1 17 116 19 117 1.48e-30 115
MS.gene005419.t1 MTR_2g095520 55.208 96 41 2 17 111 17 111 1.67e-30 117
MS.gene005419.t1 MTR_3g097450 45.161 124 66 2 1 123 1 123 1.80e-30 117
MS.gene005419.t1 MTR_6g009430 50.000 110 53 2 16 124 16 124 2.43e-30 117
MS.gene005419.t1 MTR_4g082290 47.368 114 57 3 11 123 12 123 2.55e-30 119
MS.gene005419.t1 MTR_8g017540 47.107 121 61 3 4 123 51 169 4.27e-30 118
MS.gene005419.t1 MTR_7g011170 46.087 115 59 3 11 124 12 124 4.62e-30 116
MS.gene005419.t1 MTR_4g082230 46.957 115 58 3 10 123 11 123 5.49e-30 117
MS.gene005419.t1 MTR_1g086530 48.544 103 52 1 17 119 38 139 5.63e-30 115
MS.gene005419.t1 MTR_6g090405 50.476 105 50 2 17 120 17 120 8.07e-30 114
MS.gene005419.t1 MTR_0008s0280 48.598 107 51 2 12 115 9 114 8.54e-30 113
MS.gene005419.t1 MTR_6g012690 41.304 138 75 4 11 144 12 147 1.48e-29 115
MS.gene005419.t1 MTR_8g020490 47.664 107 55 1 5 111 1 106 2.14e-29 113
MS.gene005419.t1 MTR_2g034790 36.364 187 104 5 11 192 12 188 3.17e-29 114
MS.gene005419.t1 MTR_4g100720 41.985 131 74 2 9 139 10 138 3.41e-29 110
MS.gene005419.t1 MTR_0008s0470 40.580 138 78 3 11 146 13 148 3.42e-29 113
MS.gene005419.t1 MTR_8g031360 48.598 107 52 3 11 116 13 117 4.09e-29 113
MS.gene005419.t1 MTR_6g012180 51.579 95 45 1 17 111 17 110 4.81e-29 113
MS.gene005419.t1 MTR_4g097570 55.208 96 40 3 17 110 17 111 5.48e-29 113
MS.gene005419.t1 MTR_8g027345 50.526 95 46 1 17 111 17 110 5.74e-29 113
MS.gene005419.t1 MTR_4g128670 52.083 96 44 2 17 111 17 111 9.85e-29 113
MS.gene005419.t1 MTR_7g010210 37.989 179 96 5 17 193 17 182 1.04e-28 111
MS.gene005419.t1 MTR_0140s0030 51.000 100 47 2 17 115 18 116 1.14e-28 113
MS.gene005419.t1 MTR_0489s0020 51.000 100 47 2 17 115 18 116 1.14e-28 113
MS.gene005419.t1 MTR_4g125520 33.962 265 150 10 1 248 1 257 1.22e-28 112
MS.gene005419.t1 MTR_7g117730 47.368 95 49 1 17 111 17 110 1.91e-28 110
MS.gene005419.t1 MTR_2g089420 42.963 135 62 3 8 142 8 127 2.06e-28 114
MS.gene005419.t1 MTR_1g073170 46.429 112 58 2 4 115 13 122 2.08e-28 110
MS.gene005419.t1 MTR_3g039990 49.495 99 49 1 17 115 18 115 2.53e-28 111
MS.gene005419.t1 MTR_8g017340 43.571 140 70 4 6 137 6 144 3.30e-28 114
MS.gene005419.t1 MTR_7g087130 48.485 99 50 1 17 115 17 114 3.66e-28 111
MS.gene005419.t1 MTR_7g010210 37.989 179 96 5 17 193 17 182 3.72e-28 111
MS.gene005419.t1 MTR_3g083540 46.491 114 58 3 11 123 41 152 3.96e-28 110
MS.gene005419.t1 MTR_7g096930 47.619 105 53 2 11 115 12 114 3.98e-28 110
MS.gene005419.t1 MTR_8g017390 47.748 111 56 2 6 115 6 115 7.48e-28 112
MS.gene005419.t1 MTR_1g100667 50.000 100 49 1 16 115 17 115 8.83e-28 109
MS.gene005419.t1 MTR_8g017350 42.857 140 71 4 6 137 6 144 1.44e-27 113
MS.gene005419.t1 MTR_1g045610 48.485 99 50 1 17 115 26 123 3.63e-27 107
MS.gene005419.t1 MTR_4g485530 46.154 104 55 1 12 115 12 114 5.73e-27 105
MS.gene005419.t1 MTR_6g055910 48.039 102 52 1 16 117 18 118 7.26e-27 107
MS.gene005419.t1 MTR_1g086510 44.660 103 56 1 17 119 26 127 9.21e-27 106
MS.gene005419.t1 MTR_5g078140 46.087 115 59 3 11 124 12 124 1.06e-26 107
MS.gene005419.t1 MTR_0197s0010 46.465 99 52 1 13 111 2 99 1.09e-26 105
MS.gene005419.t1 MTR_3g065440 46.087 115 59 3 11 124 12 124 1.42e-26 107
MS.gene005419.t1 MTR_0063s0090 37.671 146 82 3 12 154 9 148 1.71e-26 104
MS.gene005419.t1 MTR_4g102380 44.954 109 58 2 17 124 17 124 1.83e-26 105
MS.gene005419.t1 MTR_2g067420 52.632 95 44 1 17 111 19 112 1.96e-26 107
MS.gene005419.t1 MTR_4g029540 39.474 152 83 5 17 167 15 158 3.24e-26 105
MS.gene005419.t1 MTR_7g109320 52.475 101 46 2 11 111 12 110 9.67e-26 105
MS.gene005419.t1 MTR_0247s0040 46.939 98 51 1 17 114 12 108 1.00e-25 101
MS.gene005419.t1 MTR_5g078910 43.925 107 58 2 9 115 5 109 1.73e-25 103
MS.gene005419.t1 MTR_1g062940 46.226 106 55 2 11 116 6 109 4.54e-25 100
MS.gene005419.t1 MTR_5g078930 42.308 104 59 1 8 111 5 107 5.90e-25 100
MS.gene005419.t1 MTR_5g079120 42.593 108 61 1 8 115 57 163 1.08e-24 101
MS.gene005419.t1 MTR_2g033170 46.602 103 54 1 17 119 29 130 1.09e-24 102
MS.gene005419.t1 MTR_0193s0090 44.444 99 54 1 17 115 12 109 1.50e-24 99.0
MS.gene005419.t1 MTR_4g063100 43.636 110 58 2 17 123 12 120 1.88e-24 100
MS.gene005419.t1 MTR_5g042030 43.860 114 61 3 11 123 7 118 2.04e-24 100
MS.gene005419.t1 MTR_5g079290 43.434 99 55 1 17 115 22 119 3.18e-24 99.8
MS.gene005419.t1 MTR_8g006470 45.631 103 54 2 17 118 15 116 5.44e-24 99.4
MS.gene005419.t1 MTR_5g078950 41.121 107 62 1 8 114 3 108 1.80e-23 97.4
MS.gene005419.t1 MTR_5g079220 43.434 99 55 1 17 115 26 123 3.78e-23 97.1
MS.gene005419.t1 MTR_8g060940 44.211 95 52 1 17 111 12 105 4.04e-23 96.3
MS.gene005419.t1 MTR_5g078860 42.857 105 58 2 11 115 7 109 1.90e-22 95.5
MS.gene005419.t1 MTR_2g096380 45.455 99 53 1 17 115 11 108 2.74e-22 93.6
MS.gene005419.t1 MTR_3g101290 42.453 106 59 2 17 122 40 143 5.43e-22 92.8
MS.gene005419.t1 MTR_5g078800 42.857 105 58 2 11 115 7 109 6.32e-22 93.2
MS.gene005419.t1 MTR_0001s0360 41.414 99 57 1 17 115 12 109 1.21e-21 92.4
MS.gene005419.t1 MTR_4g123040 45.455 99 53 1 17 115 29 126 1.32e-21 93.6
MS.gene005419.t1 MTR_7g017260 42.268 97 53 2 17 111 30 125 2.08e-21 92.0
MS.gene005419.t1 MTR_5g016510 46.000 100 51 3 17 115 8 105 3.18e-21 92.4
MS.gene005419.t1 MTR_7g111290 56.716 67 28 1 44 110 2 67 3.24e-21 92.8
MS.gene005419.t1 MTR_3g045430 39.091 110 65 2 15 123 16 124 8.00e-21 90.9
MS.gene005419.t1 MTR_3g077650 38.710 124 72 3 17 138 184 305 1.72e-20 91.7
MS.gene005419.t1 MTR_6g015455 45.745 94 49 2 17 110 8 99 2.82e-20 92.0
MS.gene005419.t1 MTR_7g035350 44.444 99 53 2 16 114 227 323 4.24e-20 90.5
MS.gene005419.t1 MTR_5g070020 42.000 100 56 2 17 116 125 222 5.09e-20 89.7
MS.gene005419.t1 MTR_3g463400 42.000 100 56 2 17 116 136 233 5.36e-20 90.5
MS.gene005419.t1 MTR_4g105660 37.097 124 74 3 17 138 183 304 7.47e-20 89.7
MS.gene005419.t1 MTR_4g019370 39.316 117 67 3 17 133 41 153 1.71e-19 88.2
MS.gene005419.t1 MTR_5g007300 50.000 76 37 1 11 86 64 138 1.82e-19 83.6
MS.gene005419.t1 MTR_6g055910 49.315 73 36 1 45 117 18 89 5.49e-19 85.1
MS.gene005419.t1 MTR_4g063100 51.389 72 34 1 44 115 10 80 9.81e-19 83.6
MS.gene005419.t1 MTR_5g049190 41.414 99 56 2 17 115 22 118 1.05e-18 84.0
MS.gene005419.t1 MTR_6g027340 37.736 106 64 2 17 122 19 122 1.48e-18 82.8
MS.gene005419.t1 MTR_6g074860 41.176 102 55 3 17 115 7 106 2.04e-18 83.2
MS.gene005419.t1 MTR_4g094982 43.000 100 54 3 17 115 8 105 9.33e-18 82.0
MS.gene005419.t1 MTR_2g096380 50.000 72 35 1 44 115 19 89 1.58e-17 80.1
MS.gene005419.t1 MTR_7g451170 39.000 100 59 2 17 116 194 291 1.95e-17 82.8
MS.gene005419.t1 MTR_6g027360 36.111 108 67 2 17 124 81 186 2.90e-17 81.3
MS.gene005419.t1 MTR_4g088015 40.000 100 58 2 17 116 224 321 4.54e-17 81.6
MS.gene005419.t1 MTR_5g010650 41.489 94 53 2 17 110 113 204 8.39e-17 80.9
MS.gene005419.t1 MTR_5g082910 41.053 95 54 2 17 111 22 114 1.37e-16 79.0
MS.gene005419.t1 MTR_7g061550 37.273 110 66 2 11 118 4 112 1.62e-16 79.7
MS.gene005419.t1 MTR_7g061330 31.553 206 129 6 6 202 70 272 2.75e-16 79.7
MS.gene005419.t1 MTR_7g061330 34.615 104 59 3 9 109 22 119 9.46e-13 68.9
MS.gene005419.t1 MTR_7g037260 36.634 101 62 2 17 117 148 246 2.96e-16 79.0
MS.gene005419.t1 MTR_7g061330 34.194 155 91 5 6 152 106 257 3.22e-16 79.3
MS.gene005419.t1 MTR_7g061330 34.615 104 59 3 9 109 58 155 9.06e-13 68.9
MS.gene005419.t1 MTR_7g461410 34.194 155 91 5 6 152 106 257 3.22e-16 79.3
MS.gene005419.t1 MTR_7g461410 34.615 104 59 3 9 109 58 155 9.06e-13 68.9
MS.gene005419.t1 MTR_1g057980 39.796 98 57 2 17 114 83 178 3.37e-16 77.8
MS.gene005419.t1 MTR_3g110028 37.273 110 66 3 6 115 78 184 1.78e-15 77.4
MS.gene005419.t1 MTR_3g110028 36.364 99 52 2 17 110 36 128 5.42e-14 73.2
MS.gene005419.t1 MTR_4g082040 37.500 104 60 3 17 117 108 209 3.83e-15 75.9
MS.gene005419.t1 MTR_1g026870 35.455 110 68 3 6 115 78 184 7.53e-15 75.9
MS.gene005419.t1 MTR_1g026870 35.354 99 53 2 17 110 36 128 1.24e-13 72.0
MS.gene005419.t1 MTR_5g038910 33.824 136 84 3 7 142 19 148 8.11e-15 75.1
MS.gene005419.t1 MTR_5g038910 33.824 136 84 3 7 142 19 148 8.46e-15 74.7
MS.gene005419.t1 MTR_3g089045 38.462 104 59 3 17 117 19 120 1.07e-14 73.6
MS.gene005419.t1 MTR_7g450950 35.714 98 61 2 17 114 160 255 1.38e-14 73.6
MS.gene005419.t1 MTR_5g041570 36.538 104 61 3 17 117 137 238 1.42e-14 74.3
MS.gene005419.t1 MTR_6g027370 33.607 122 79 2 17 138 102 221 1.69e-14 73.6
MS.gene005419.t1 MTR_0023s0210 43.662 71 39 1 11 81 7 76 1.98e-14 68.2
MS.gene005419.t1 MTR_7g037130 36.735 98 60 2 17 114 148 243 2.46e-14 73.2
MS.gene005419.t1 MTR_7g086960 35.185 108 68 2 17 124 92 197 4.47e-13 69.3
MS.gene005419.t1 MTR_8g468380 32.174 115 76 2 7 121 15 127 8.35e-13 68.9
MS.gene005419.t1 MTR_6g013135 29.534 193 91 7 97 285 148 299 2.78e-12 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene005419.t1 AT2G26960 47.020 151 69 4 17 157 25 174 2.16e-38 141
MS.gene005419.t1 AT5G06100 54.167 120 53 2 11 130 32 149 8.10e-38 140
MS.gene005419.t1 AT5G06100 54.167 120 53 2 11 130 32 149 1.75e-37 140
MS.gene005419.t1 AT5G06100 54.167 120 53 2 11 130 32 149 1.75e-37 140
MS.gene005419.t1 AT5G06100 54.167 120 53 2 11 130 32 149 1.75e-37 140
MS.gene005419.t1 AT5G06100 54.167 120 53 2 11 130 32 149 1.75e-37 140
MS.gene005419.t1 AT2G32460 42.500 160 81 3 6 165 1 149 4.55e-37 138
MS.gene005419.t1 AT2G32460 41.718 163 84 3 3 165 10 161 5.96e-37 138
MS.gene005419.t1 AT5G55020 51.695 118 55 2 11 128 26 141 1.01e-36 138
MS.gene005419.t1 AT3G11440 51.639 122 57 2 11 132 41 160 1.09e-36 137
MS.gene005419.t1 AT3G11440 51.639 122 57 2 11 132 41 160 3.05e-36 137
MS.gene005419.t1 AT3G11440 51.639 122 57 2 11 132 41 160 3.05e-36 137
MS.gene005419.t1 AT3G11440 51.639 122 57 2 11 132 41 160 3.05e-36 137
MS.gene005419.t1 AT4G26930 51.304 115 54 2 11 125 19 131 8.40e-36 133
MS.gene005419.t1 AT5G26660 47.794 136 68 3 4 138 5 138 3.63e-35 130
MS.gene005419.t1 AT4G21440 54.386 114 49 3 11 123 12 123 4.87e-35 130
MS.gene005419.t1 AT2G26950 49.194 124 62 1 5 128 9 131 2.09e-34 129
MS.gene005419.t1 AT4G01680 47.619 126 63 3 4 128 5 128 1.08e-33 124
MS.gene005419.t1 AT5G54230 40.491 163 90 3 17 173 17 178 1.57e-33 125
MS.gene005419.t1 AT1G57560 50.000 122 58 3 4 124 5 124 2.07e-33 124
MS.gene005419.t1 AT1G57560 50.000 122 58 3 4 124 5 124 4.44e-33 124
MS.gene005419.t1 AT4G28110 52.294 109 50 2 17 124 17 124 7.20e-33 123
MS.gene005419.t1 AT4G01680 49.180 122 59 3 4 124 5 124 9.18e-33 124
MS.gene005419.t1 AT4G05100 51.754 114 52 3 11 123 13 124 1.60e-32 123
MS.gene005419.t1 AT1G09540 49.587 121 58 3 4 123 5 123 4.66e-32 122
MS.gene005419.t1 AT3G61250 48.246 114 56 3 11 123 12 123 6.25e-32 121
MS.gene005419.t1 AT3G08500 51.887 106 49 2 10 115 29 132 8.18e-32 121
MS.gene005419.t1 AT5G12870 51.852 108 50 2 9 116 16 121 8.27e-32 120
MS.gene005419.t1 AT4G37780 53.000 100 45 2 17 115 17 115 1.28e-31 120
MS.gene005419.t1 AT1G22640 45.968 124 65 2 1 123 1 123 1.34e-31 119
MS.gene005419.t1 AT4G38620 46.774 124 64 2 1 123 1 123 1.47e-31 119
MS.gene005419.t1 AT4G09460 45.161 124 66 2 1 123 1 123 1.51e-31 118
MS.gene005419.t1 AT3G13890 49.107 112 55 2 4 115 5 114 1.71e-31 121
MS.gene005419.t1 AT5G16770 50.476 105 50 2 11 115 12 114 2.13e-31 120
MS.gene005419.t1 AT5G16770 50.476 105 50 2 11 115 12 114 2.13e-31 120
MS.gene005419.t1 AT1G74080 37.705 183 86 7 11 169 12 190 3.85e-31 119
MS.gene005419.t1 AT5G16770 50.476 105 50 2 11 115 12 114 4.11e-31 119
MS.gene005419.t1 AT5G16770 50.476 105 50 2 11 115 12 114 4.11e-31 119
MS.gene005419.t1 AT1G35515 45.968 124 65 2 1 123 1 123 4.42e-31 116
MS.gene005419.t1 AT5G56110 49.541 109 53 2 17 124 17 124 4.80e-31 119
MS.gene005419.t1 AT4G34990 45.161 124 66 2 1 123 1 123 7.04e-31 117
MS.gene005419.t1 AT5G10280 49.565 115 55 3 11 124 12 124 1.01e-30 118
MS.gene005419.t1 AT2G16720 45.161 124 66 2 1 123 1 123 1.20e-30 117
MS.gene005419.t1 AT5G23000 54.000 100 44 2 17 115 17 115 1.47e-30 118
MS.gene005419.t1 AT3G02940 50.476 105 50 2 11 115 12 114 1.60e-30 117
MS.gene005419.t1 AT1G63910 48.696 115 57 2 4 118 5 117 1.80e-30 118
MS.gene005419.t1 AT3G49690 54.000 100 44 2 17 115 17 115 2.20e-30 117
MS.gene005419.t1 AT5G15310 48.571 105 52 2 11 115 12 114 2.86e-30 115
MS.gene005419.t1 AT5G52600 42.222 135 67 3 16 140 16 149 2.90e-30 114
MS.gene005419.t1 AT5G14750 51.042 96 46 1 16 111 20 114 2.99e-30 114
MS.gene005419.t1 AT3G02940 50.476 105 50 2 11 115 12 114 3.24e-30 117
MS.gene005419.t1 AT3G02940 50.476 105 50 2 11 115 12 114 3.24e-30 117
MS.gene005419.t1 AT3G28470 54.167 96 43 1 16 111 16 110 3.51e-30 117
MS.gene005419.t1 AT2G36890 48.182 110 55 2 17 125 17 125 4.27e-30 116
MS.gene005419.t1 AT3G01530 37.419 155 92 2 4 154 13 166 4.72e-30 113
MS.gene005419.t1 AT3G01140 46.087 115 59 3 11 124 12 124 5.52e-30 117
MS.gene005419.t1 AT3G27810 51.000 100 48 1 17 116 25 123 5.85e-30 114
MS.gene005419.t1 AT3G01140 46.087 115 59 3 11 124 55 167 6.10e-30 117
MS.gene005419.t1 AT3G12720 45.833 120 62 3 10 128 21 138 6.82e-30 115
MS.gene005419.t1 AT5G57620 52.000 100 46 2 17 115 17 115 7.64e-30 116
MS.gene005419.t1 AT5G65230 49.565 115 55 3 11 124 12 124 7.76e-30 115
MS.gene005419.t1 AT2G36890 48.182 110 55 2 17 125 58 166 8.23e-30 116
MS.gene005419.t1 AT5G40350 50.000 100 49 1 17 116 22 120 8.78e-30 113
MS.gene005419.t1 AT1G34670 48.696 115 56 3 11 124 12 124 9.62e-30 116
MS.gene005419.t1 AT5G15310 46.087 115 59 3 11 124 12 124 1.49e-29 115
MS.gene005419.t1 AT5G15310 46.087 115 59 3 11 124 12 124 1.54e-29 115
MS.gene005419.t1 AT3G13540 45.833 120 62 3 5 123 17 134 1.63e-29 113
MS.gene005419.t1 AT3G23250 48.571 105 52 2 11 115 12 114 1.85e-29 114
MS.gene005419.t1 AT4G17785 49.074 108 53 2 8 115 10 115 2.07e-29 115
MS.gene005419.t1 AT1G74650 49.495 99 49 1 17 115 17 114 2.09e-29 115
MS.gene005419.t1 AT1G18710 44.954 109 58 2 17 124 17 124 2.17e-29 113
MS.gene005419.t1 AT4G17785 49.074 108 53 2 8 115 10 115 2.33e-29 115
MS.gene005419.t1 AT4G01680 45.113 133 58 4 4 123 5 135 2.39e-29 115
MS.gene005419.t1 AT5G40330 43.802 121 65 2 16 136 16 133 2.53e-29 112
MS.gene005419.t1 AT5G62470 45.038 131 66 3 17 146 17 142 2.60e-29 115
MS.gene005419.t1 AT3G27920 49.074 108 53 2 8 115 11 116 2.63e-29 112
MS.gene005419.t1 AT5G65790 53.000 100 45 2 17 115 17 115 3.09e-29 115
MS.gene005419.t1 AT1G48000 48.039 102 52 1 17 118 37 137 6.57e-29 111
MS.gene005419.t1 AT1G06180 48.624 109 54 2 11 119 12 118 9.03e-29 111
MS.gene005419.t1 AT3G13890 45.455 121 55 3 4 115 5 123 1.33e-28 113
MS.gene005419.t1 AT1G16490 50.505 99 48 1 17 115 19 116 1.73e-28 111
MS.gene005419.t1 AT1G18570 44.737 114 60 3 11 123 13 124 1.98e-28 112
MS.gene005419.t1 AT1G74430 44.954 109 58 2 17 124 17 124 2.00e-28 111
MS.gene005419.t1 AT3G47600 48.485 99 50 1 17 115 17 114 2.30e-28 112
MS.gene005419.t1 AT2G47460 51.579 95 45 1 17 111 17 110 2.42e-28 112
MS.gene005419.t1 AT1G56160 50.505 99 48 1 17 115 19 116 2.92e-28 111
MS.gene005419.t1 AT2G47190 47.573 103 53 1 17 119 25 126 3.00e-28 110
MS.gene005419.t1 AT2G31180 47.475 99 51 1 17 115 17 114 3.16e-28 110
MS.gene005419.t1 AT3G28910 49.495 99 49 1 17 115 17 114 3.72e-28 111
MS.gene005419.t1 AT1G79180 45.763 118 60 3 10 125 13 128 4.04e-28 110
MS.gene005419.t1 AT1G08810 48.485 99 50 1 17 115 17 114 4.12e-28 110
MS.gene005419.t1 AT1G68320 35.789 190 106 5 17 192 24 211 4.95e-28 110
MS.gene005419.t1 AT1G25340 46.602 103 54 1 17 119 23 124 6.35e-28 110
MS.gene005419.t1 AT5G07690 46.667 105 54 2 11 115 12 114 7.36e-28 110
MS.gene005419.t1 AT5G62470 45.038 131 65 4 17 146 17 141 7.56e-28 111
MS.gene005419.t1 AT5G62320 46.957 115 52 3 17 123 18 131 8.97e-28 108
MS.gene005419.t1 AT5G14340 48.246 114 56 3 11 123 24 135 9.84e-28 109
MS.gene005419.t1 AT4G13480 46.957 115 56 2 17 131 11 120 1.01e-27 108
MS.gene005419.t1 AT5G49330 50.495 101 48 2 11 111 12 110 1.12e-27 110
MS.gene005419.t1 AT3G62610 49.474 95 47 1 17 111 17 110 1.24e-27 110
MS.gene005419.t1 AT3G12820 49.495 99 49 1 17 115 19 116 1.33e-27 108
MS.gene005419.t1 AT5G35550 47.573 103 53 1 13 115 15 116 1.64e-27 108
MS.gene005419.t1 AT5G61420 43.478 115 62 3 11 124 12 124 1.97e-27 110
MS.gene005419.t1 AT5G60890 37.013 154 83 5 11 152 12 163 2.05e-27 108
MS.gene005419.t1 AT5G07700 45.714 105 55 2 11 115 12 114 2.11e-27 109
MS.gene005419.t1 AT5G07700 45.714 105 55 2 11 115 12 114 2.11e-27 109
MS.gene005419.t1 AT1G66230 46.957 115 58 3 11 124 12 124 5.31e-27 107
MS.gene005419.t1 AT5G16600 46.087 115 59 3 11 124 12 124 1.42e-26 107
MS.gene005419.t1 AT3G24310 48.485 99 50 1 17 115 23 120 1.50e-26 105
MS.gene005419.t1 AT3G30210 46.078 102 54 1 17 118 32 132 3.81e-26 105
MS.gene005419.t1 AT3G48920 47.000 100 52 1 16 115 22 120 6.36e-25 101
MS.gene005419.t1 AT4G22680 44.037 109 59 2 17 124 17 124 7.54e-25 101
MS.gene005419.t1 AT3G60460 44.037 109 58 3 11 118 11 117 8.88e-25 102
MS.gene005419.t1 AT5G26660 46.535 101 52 2 39 138 8 107 1.28e-24 102
MS.gene005419.t1 AT4G12350 46.465 99 52 1 17 115 17 114 1.79e-24 100
MS.gene005419.t1 AT1G25340 44.660 103 51 2 17 119 23 119 2.77e-24 100
MS.gene005419.t1 AT3G06490 47.706 109 55 2 11 119 19 125 3.51e-24 100
MS.gene005419.t1 AT1G66370 42.727 110 60 3 9 117 6 113 3.89e-24 99.0
MS.gene005419.t1 AT1G25340 44.660 103 51 2 17 119 23 119 3.95e-24 100
MS.gene005419.t1 AT1G66380 42.857 112 61 3 7 117 4 113 6.30e-24 95.5
MS.gene005419.t1 AT5G59780 43.519 108 60 1 17 124 13 119 1.32e-23 97.4
MS.gene005419.t1 AT3G46130 42.593 108 61 1 17 124 14 120 4.14e-23 96.7
MS.gene005419.t1 AT5G49620 45.631 103 55 1 17 119 31 132 4.57e-23 97.4
MS.gene005419.t1 AT1G56650 38.281 128 68 4 7 125 4 129 5.46e-23 95.9
MS.gene005419.t1 AT1G66390 41.964 112 62 3 7 117 4 113 6.16e-23 95.9
MS.gene005419.t1 AT3G53200 45.545 101 54 1 17 117 14 113 7.22e-23 95.5
MS.gene005419.t1 AT1G79180 36.806 144 55 3 17 125 19 161 1.07e-22 96.7
MS.gene005419.t1 AT4G25560 45.000 100 54 1 16 115 14 112 1.42e-22 95.5
MS.gene005419.t1 AT5G52260 45.794 107 57 1 9 115 9 114 1.57e-22 95.1
MS.gene005419.t1 AT5G49620 41.379 116 55 1 17 119 31 146 7.39e-22 94.4
MS.gene005419.t1 AT4G18770 39.706 136 74 4 9 138 208 341 1.35e-21 94.7
MS.gene005419.t1 AT3G50060 42.453 106 59 2 17 122 9 112 2.49e-21 92.4
MS.gene005419.t1 AT5G40350 52.703 74 34 1 43 116 3 75 2.56e-21 89.4
MS.gene005419.t1 AT3G27810 54.167 72 32 1 45 116 4 74 7.19e-21 88.2
MS.gene005419.t1 AT3G27785 42.718 103 56 3 17 118 192 292 2.15e-20 91.7
MS.gene005419.t1 AT4G37260 43.925 107 57 3 17 122 16 120 3.80e-20 89.4
MS.gene005419.t1 AT5G67300 46.000 100 51 3 17 115 9 106 1.50e-19 87.4
MS.gene005419.t1 AT2G23290 44.000 100 53 3 17 115 16 113 3.15e-19 86.7
MS.gene005419.t1 AT5G40360 40.404 99 57 2 17 115 161 257 4.16e-19 87.0
MS.gene005419.t1 AT5G58850 43.000 100 55 2 17 116 108 205 4.44e-19 87.4
MS.gene005419.t1 AT5G11050 34.375 160 91 4 17 164 108 265 7.44e-19 87.0
MS.gene005419.t1 AT2G39880 38.931 131 76 3 17 145 53 181 7.84e-19 86.3
MS.gene005419.t1 AT1G17950 40.367 109 61 3 17 123 8 114 1.19e-18 84.0
MS.gene005419.t1 AT3G53200 50.685 73 35 1 45 117 9 80 1.60e-18 82.8
MS.gene005419.t1 AT5G35550 53.521 71 32 1 45 115 50 119 2.27e-18 83.6
MS.gene005419.t1 AT3G12820 53.731 67 30 1 49 115 3 68 3.64e-18 81.3
MS.gene005419.t1 AT5G14750 44.578 83 40 2 38 115 3 84 1.60e-17 79.0
MS.gene005419.t1 AT3G46130 50.000 72 35 1 44 115 9 79 2.32e-17 80.1
MS.gene005419.t1 AT4G33450 37.736 106 64 2 17 122 22 125 2.60e-17 80.5
MS.gene005419.t1 AT2G25230 35.878 131 75 5 5 128 13 141 4.95e-17 79.3
MS.gene005419.t1 AT5G59780 46.250 80 42 1 45 124 20 98 5.54e-17 78.6
MS.gene005419.t1 AT3G46130 50.704 71 34 1 45 115 20 89 7.24e-17 79.0
MS.gene005419.t1 AT3G55730 40.404 99 57 2 17 115 59 155 7.77e-17 80.9
MS.gene005419.t1 AT3G09370 35.294 136 84 4 17 150 138 271 9.09e-17 81.3
MS.gene005419.t1 AT3G09370 36.634 101 61 2 9 109 80 177 5.68e-14 72.8
MS.gene005419.t1 AT3G09370 35.294 136 84 4 17 150 133 266 9.52e-17 80.9
MS.gene005419.t1 AT3G09370 36.634 101 61 2 9 109 75 172 6.13e-14 72.8
MS.gene005419.t1 AT3G09370 35.294 136 84 4 17 150 146 279 1.19e-16 80.9
MS.gene005419.t1 AT3G09370 36.275 102 62 2 9 110 88 186 9.10e-14 72.0
MS.gene005419.t1 AT3G47600 47.887 71 36 1 45 115 39 108 2.23e-16 79.0
MS.gene005419.t1 AT3G09230 36.000 100 62 2 17 116 58 155 6.25e-16 78.2
MS.gene005419.t1 AT5G17800 37.168 113 65 3 17 125 96 206 1.36e-15 76.6
MS.gene005419.t1 AT1G73410 39.252 107 63 2 17 123 9 113 1.51e-15 75.1
MS.gene005419.t1 AT1G73410 39.252 107 63 2 17 123 9 113 1.67e-15 74.3
MS.gene005419.t1 AT2G37630 39.091 110 64 2 11 118 1 109 1.92e-15 76.6
MS.gene005419.t1 AT1G66380 46.667 75 38 2 44 117 7 80 2.11e-15 71.6
MS.gene005419.t1 AT1G26780 36.190 105 64 3 17 120 101 203 2.27e-15 75.5
MS.gene005419.t1 AT1G26780 36.538 104 63 3 17 119 101 202 2.72e-15 75.9
MS.gene005419.t1 AT1G69560 38.000 100 57 3 17 113 110 207 2.80e-15 75.9
MS.gene005419.t1 AT1G69560 36.842 95 58 2 17 111 126 218 3.19e-15 75.9
MS.gene005419.t1 AT5G02320 36.364 110 67 3 6 115 60 166 5.49e-15 75.9
MS.gene005419.t1 AT5G02320 34.906 106 58 3 9 110 12 110 1.50e-13 71.2
MS.gene005419.t1 AT5G02320 36.364 110 67 3 6 115 120 226 6.15e-15 75.9
MS.gene005419.t1 AT5G02320 34.906 106 58 3 9 110 72 170 1.41e-13 71.6
MS.gene005419.t1 AT5G02320 36.364 110 67 3 6 115 120 226 6.15e-15 75.9
MS.gene005419.t1 AT5G02320 34.906 106 58 3 9 110 72 170 1.41e-13 71.6
MS.gene005419.t1 AT4G32730 36.364 110 67 3 6 115 80 186 1.01e-14 75.1
MS.gene005419.t1 AT4G32730 34.343 99 54 2 17 110 38 130 6.27e-13 69.7
MS.gene005419.t1 AT4G32730 36.364 110 67 3 6 115 80 186 1.15e-14 75.1
MS.gene005419.t1 AT4G32730 34.343 99 54 2 17 110 38 130 7.14e-13 69.7
MS.gene005419.t1 AT4G32730 36.364 110 67 3 6 115 80 186 1.15e-14 75.1
MS.gene005419.t1 AT4G32730 34.343 99 54 2 17 110 38 130 7.14e-13 69.7
MS.gene005419.t1 AT4G32730 36.364 110 67 3 6 115 80 186 1.15e-14 75.1
MS.gene005419.t1 AT4G32730 34.343 99 54 2 17 110 38 130 7.14e-13 69.7
MS.gene005419.t1 AT4G32730 36.364 110 67 3 6 115 80 186 1.15e-14 75.1
MS.gene005419.t1 AT4G32730 34.343 99 54 2 17 110 38 130 7.14e-13 69.7
MS.gene005419.t1 AT1G14350 36.283 113 70 2 7 119 18 128 1.33e-14 74.3
MS.gene005419.t1 AT1G14350 36.283 113 70 2 7 119 18 128 1.33e-14 74.3
MS.gene005419.t1 AT4G00540 35.252 139 78 6 6 139 96 227 2.16e-14 73.6
MS.gene005419.t1 AT4G00540 35.252 139 78 6 6 139 94 225 2.62e-14 73.6
MS.gene005419.t1 AT5G11510 34.545 110 69 3 6 115 74 180 2.93e-14 73.9
MS.gene005419.t1 AT5G11510 35.106 94 60 1 17 110 32 124 1.28e-12 68.9
MS.gene005419.t1 AT5G11510 34.545 110 69 3 6 115 74 180 3.00e-14 73.9
MS.gene005419.t1 AT5G11510 35.106 94 60 1 17 110 32 124 1.42e-12 68.9
MS.gene005419.t1 AT5G11510 34.545 110 69 3 6 115 74 180 3.31e-14 73.9
MS.gene005419.t1 AT5G11510 35.106 94 60 1 17 110 32 124 1.39e-12 68.9
MS.gene005419.t1 AT5G11510 34.545 110 69 3 6 115 74 180 3.31e-14 73.9
MS.gene005419.t1 AT5G11510 35.106 94 60 1 17 110 32 124 1.39e-12 68.9
MS.gene005419.t1 AT5G11510 34.545 110 69 3 6 115 74 180 3.31e-14 73.9
MS.gene005419.t1 AT5G11510 35.106 94 60 1 17 110 32 124 1.39e-12 68.9
MS.gene005419.t1 AT2G02820 35.398 113 71 2 7 119 23 133 3.84e-14 73.2
MS.gene005419.t1 AT3G29020 37.500 104 60 3 17 117 68 169 3.90e-14 71.2
MS.gene005419.t1 AT2G02820 35.398 113 71 2 7 119 23 133 3.96e-14 73.2
MS.gene005419.t1 AT3G29020 37.500 104 60 3 17 117 70 171 6.08e-14 71.6
MS.gene005419.t1 AT2G02820 35.398 113 71 2 7 119 23 133 8.08e-14 71.6
MS.gene005419.t1 AT1G66380 42.647 68 38 1 7 74 4 70 8.28e-14 67.0
MS.gene005419.t1 AT5G40430 34.783 115 66 4 1 115 47 152 1.17e-12 67.4
MS.gene005419.t1 AT1G22640 50.000 66 31 2 59 123 2 66 1.80e-12 65.9
MS.gene005419.t1 AT3G18100 38.614 101 53 4 12 109 384 478 8.78e-12 66.2
MS.gene005419.t1 AT3G18100 38.614 101 53 4 12 109 332 426 1.00e-11 66.2
MS.gene005419.t1 AT3G18100 38.614 101 53 4 12 109 497 591 1.09e-11 66.2
MS.gene005419.t1 AT3G18100 38.614 101 53 4 12 109 545 639 1.23e-11 65.9
MS.gene005419.t1 AT5G39700 36.893 103 63 2 9 111 51 151 1.74e-11 62.8
MS.gene005419.t1 AT3G23250 49.123 57 28 1 59 115 2 57 2.34e-11 63.2

Find 67 sgRNAs with CRISPR-Local

Find 85 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATATTTGAAAACTGCTTATT+TGG 0.104393 1.1:-63553459 None:intergenic
ACATAATGAATCCGGAATTT+TGG 0.151632 1.1:+63553753 MS.gene005419:CDS
CAGATACCAGAAGTTAAATT+TGG 0.178249 1.1:+63553402 MS.gene005419:CDS
CATCGTTGGTTACTAATAAA+AGG 0.205474 1.1:+63552782 MS.gene005419:CDS
TGATACCTCCTTCCAATTTC+CGG 0.211449 1.1:-63552875 None:intergenic
GGAACCCTTATACGGATATT+TGG 0.228598 1.1:+63554000 MS.gene005419:CDS
CTACTTCAACTTTGATTGAT+AGG 0.248849 1.1:+63553523 MS.gene005419:CDS
TCAAACCAAATATCCGTATA+AGG 0.249713 1.1:-63554005 None:intergenic
AAAGTTCTTGATGTCATTAT+CGG 0.301665 1.1:-63553253 None:intergenic
CCTTTGGAGAACGATGAAAA+AGG 0.312790 1.1:+63553686 MS.gene005419:CDS
ATAATGACATCAAGAACTTT+TGG 0.313765 1.1:+63553256 MS.gene005419:CDS
CATTGTCATGCAAGTGTCTA+AGG 0.322693 1.1:-63553852 None:intergenic
TGGTTTGAGGAACCCTTATA+CGG 0.340488 1.1:+63553992 MS.gene005419:CDS
ATGTCATTATCGGTTCTTCC+AGG 0.362890 1.1:-63553243 None:intergenic
TATTTGAAAACTGCTTATTT+GGG 0.371336 1.1:-63553458 None:intergenic
TGATTTCCAAATTTAACTTC+TGG 0.372019 1.1:-63553408 None:intergenic
AACGCGTCATTCCAAAATTC+CGG 0.377639 1.1:-63553764 None:intergenic
TTGATGAAAGCCAGGTCATT+TGG 0.408351 1.1:+63553972 MS.gene005419:CDS
CAAACCAAATATCCGTATAA+GGG 0.421526 1.1:-63554004 None:intergenic
TCAACCAGTTCCATGTTGTC+AGG 0.424194 1.1:-63553324 None:intergenic
TCTTCTTCTTCTTTACTAAA+CGG 0.425038 1.1:-63552979 None:intergenic
CTGGAAGAAGGCAATTGCTT+TGG 0.426159 1.1:+63553940 MS.gene005419:CDS
AAGGCATCATTAAAATCATA+TGG 0.427844 1.1:-63553833 None:intergenic
GCCTCCACTCCCACCACCTA+TGG 0.431643 1.1:+63553886 MS.gene005419:CDS
CTAAGTTTGGTGAGTTCAGA+TGG 0.440163 1.1:+63553022 MS.gene005419:CDS
GAAGAAGGCAATTGCTTTGG+CGG 0.441719 1.1:+63553943 MS.gene005419:CDS
AAGCCAGGTCATTTGGTTTG+AGG 0.452339 1.1:+63553979 MS.gene005419:CDS
AAATATGTTCTTCAATAATG+TGG 0.453078 1.1:+63553476 MS.gene005419:CDS
GGTTGAAGAATGGAACATTA+TGG 0.456552 1.1:+63552803 MS.gene005419:CDS
GGAAGAAGGGAAGAAGCCTT+TGG 0.456662 1.1:+63553670 MS.gene005419:CDS
GTCTCCATAGGTGGTGGGAG+TGG 0.457379 1.1:-63553890 None:intergenic
TTCATCGATTTCAGGGAAGA+AGG 0.458892 1.1:+63553656 MS.gene005419:intron
CTTCCCTGACAACATGGAAC+TGG 0.459486 1.1:+63553320 MS.gene005419:CDS
GACAACATGGAACTGGTTGA+TGG 0.469494 1.1:+63553327 MS.gene005419:CDS
ACATGTCAGAGATAAATAAC+TGG 0.470987 1.1:+63553921 MS.gene005419:CDS
AAGTATTATACCATCTAAAA+CGG 0.481616 1.1:-63552933 None:intergenic
ACTAATAAAAGGTTGAAGAA+TGG 0.493697 1.1:+63552793 MS.gene005419:CDS
CACTTGCATGACAATGCAAT+CGG 0.503317 1.1:+63553859 MS.gene005419:CDS
GCATGACGACATAATGAATC+CGG 0.506299 1.1:+63553745 MS.gene005419:CDS
TAACATCATGAATTCATCGT+TGG 0.509016 1.1:+63552768 None:intergenic
TCCATAGGTGGTGGGAGTGG+AGG 0.516845 1.1:-63553887 None:intergenic
AAGGCAATTGCTTTGGCGGA+AGG 0.520845 1.1:+63553947 MS.gene005419:CDS
GATTCATTATGTCGTCATGC+AGG 0.522460 1.1:-63553742 None:intergenic
CAGTTCCATGTTGTCAGGGA+AGG 0.525681 1.1:-63553319 None:intergenic
GTCACCCTTCCCTGACAACA+TGG 0.529510 1.1:+63553314 MS.gene005419:CDS
AATATGTTCTTCAATAATGT+GGG 0.531232 1.1:+63553477 MS.gene005419:CDS
AGAGATAAATAACTGGAAGA+AGG 0.539212 1.1:+63553928 MS.gene005419:CDS
TGTTGTGTCTCCATAGGTGG+TGG 0.542613 1.1:-63553896 None:intergenic
GCTTCAACATCGTTCTGCAA+AGG 0.544551 1.1:-63553716 None:intergenic
GGAAGGTGTTGATGAAAGCC+AGG 0.552494 1.1:+63553964 MS.gene005419:CDS
GATGGTCTGAAGAGTAGTAA+TGG 0.562995 1.1:+63553345 MS.gene005419:CDS
AGTTCCATGTTGTCAGGGAA+GGG 0.564461 1.1:-63553318 None:intergenic
TCATCGATTTCAGGGAAGAA+GGG 0.571612 1.1:+63553657 MS.gene005419:intron
ATGTGATGTTGTGTCTCCAT+AGG 0.574507 1.1:-63553902 None:intergenic
ACATGGAACCGGAAATTGGA+AGG 0.586011 1.1:+63552867 MS.gene005419:CDS
TGAGTTCAGATGGTCTAAGA+TGG 0.590717 1.1:+63553032 MS.gene005419:CDS
CAACCAGTTCCATGTTGTCA+GGG 0.591829 1.1:-63553323 None:intergenic
GTTCAGCACATTAGTCAATG+AGG 0.605495 1.1:+63553784 MS.gene005419:CDS
ATGGTCTAAGATGGCTCTCG+AGG 0.607145 1.1:+63553041 MS.gene005419:CDS
GTTGTGTCTCCATAGGTGGT+GGG 0.620759 1.1:-63553895 None:intergenic
GTTCCTCAAACCAAATGACC+TGG 0.626263 1.1:-63553982 None:intergenic
TGATGTTGTGTCTCCATAGG+TGG 0.627633 1.1:-63553899 None:intergenic
GAAGGAGGTATCAAAGAACA+CGG 0.666684 1.1:+63552885 MS.gene005419:CDS
AAAAGAAAACATGAAAGACA+TGG 0.669709 1.1:+63553288 MS.gene005419:CDS
TGGAACCGGAAATTGGAAGG+AGG 0.696666 1.1:+63552870 MS.gene005419:CDS
AACACGGGACTTGCACACTG+TGG 0.714946 1.1:+63552901 MS.gene005419:CDS
AAGGAGGTATCAAAGAACAC+GGG 0.739276 1.1:+63552886 MS.gene005419:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATATGTTCTTCAATAATG+TGG + chr1.1:63553476-63553495 MS.gene005419:CDS 20.0%
!! AAGTATTATACCATCTAAAA+CGG - chr1.1:63552936-63552955 None:intergenic 20.0%
!! AATATGTTCTTCAATAATGT+GGG + chr1.1:63553477-63553496 MS.gene005419:CDS 20.0%
!! ATATTTGAAAACTGCTTATT+TGG - chr1.1:63553462-63553481 None:intergenic 20.0%
!! ATTAAAATTAATGACACAAG+TGG - chr1.1:63553196-63553215 None:intergenic 20.0%
!! GATGTATATATAAAAGAGAA+TGG - chr1.1:63553571-63553590 None:intergenic 20.0%
!! TATTTGAAAACTGCTTATTT+GGG - chr1.1:63553461-63553480 None:intergenic 20.0%
!!! TTTGAGTTATTTTCTAAGTT+TGG + chr1.1:63553009-63553028 MS.gene005419:CDS 20.0%
! AAAAGAAAACATGAAAGACA+TGG + chr1.1:63553288-63553307 MS.gene005419:CDS 25.0%
! AAAGCATATGTTGAAAAACA+TGG + chr1.1:63552850-63552869 MS.gene005419:CDS 25.0%
! AAAGTTCTTGATGTCATTAT+CGG - chr1.1:63553256-63553275 None:intergenic 25.0%
! ACTAATAAAAGGTTGAAGAA+TGG + chr1.1:63552793-63552812 MS.gene005419:CDS 25.0%
! TCTTCTTCTTCTTTACTAAA+CGG - chr1.1:63552982-63553001 None:intergenic 25.0%
!! AAGGCATCATTAAAATCATA+TGG - chr1.1:63553836-63553855 None:intergenic 25.0%
!! ATAATGACATCAAGAACTTT+TGG + chr1.1:63553256-63553275 MS.gene005419:CDS 25.0%
!! GTAGTAATGGAAAAAGAATA+AGG + chr1.1:63553358-63553377 MS.gene005419:CDS 25.0%
!! TGATTTCCAAATTTAACTTC+TGG - chr1.1:63553411-63553430 None:intergenic 25.0%
!!! AATTACTTTCATCGATTTCA+GGG + chr1.1:63553649-63553668 MS.gene005419:intron 25.0%
AACATGTGATCGAATGAATA+TGG - chr1.1:63553131-63553150 None:intergenic 30.0%
ACATGTCAGAGATAAATAAC+TGG + chr1.1:63553921-63553940 MS.gene005419:CDS 30.0%
AGAGATAAATAACTGGAAGA+AGG + chr1.1:63553928-63553947 MS.gene005419:CDS 30.0%
CAAACCAAATATCCGTATAA+GGG - chr1.1:63554007-63554026 None:intergenic 30.0%
CAGATACCAGAAGTTAAATT+TGG + chr1.1:63553402-63553421 MS.gene005419:CDS 30.0%
CTACTTCAACTTTGATTGAT+AGG + chr1.1:63553523-63553542 MS.gene005419:CDS 30.0%
TATGTTGAAAAACATGGAAC+CGG + chr1.1:63552856-63552875 MS.gene005419:CDS 30.0%
TCAAACCAAATATCCGTATA+AGG - chr1.1:63554008-63554027 None:intergenic 30.0%
TTACGACCTGATGTAAAAAA+GGG + chr1.1:63552955-63552974 MS.gene005419:CDS 30.0%
TTTACGACCTGATGTAAAAA+AGG + chr1.1:63552954-63552973 MS.gene005419:CDS 30.0%
! ACATAATGAATCCGGAATTT+TGG + chr1.1:63553753-63553772 MS.gene005419:CDS 30.0%
! CATCGTTGGTTACTAATAAA+AGG + chr1.1:63552782-63552801 MS.gene005419:CDS 30.0%
!! CAATTACTTTCATCGATTTC+AGG + chr1.1:63553648-63553667 MS.gene005419:intron 30.0%
AAAAACATGGAACCGGAAAT+TGG + chr1.1:63552863-63552882 MS.gene005419:CDS 35.0%
GGTTGAAGAATGGAACATTA+TGG + chr1.1:63552803-63552822 MS.gene005419:CDS 35.0%
! CTTTGGAGAACGATGAAAAA+GGG + chr1.1:63553687-63553706 MS.gene005419:CDS 35.0%
! TTCTTTTTGTTACAGATGCC+TGG + chr1.1:63553225-63553244 MS.gene005419:intron 35.0%
AACGCGTCATTCCAAAATTC+CGG - chr1.1:63553767-63553786 None:intergenic 40.0%
AATATGGCTGCAGTTGTAGA+AGG - chr1.1:63553115-63553134 None:intergenic 40.0%
ATGTGATGTTGTGTCTCCAT+AGG - chr1.1:63553905-63553924 None:intergenic 40.0%
CACTTGCATGACAATGCAAT+CGG + chr1.1:63553859-63553878 MS.gene005419:CDS 40.0%
CATTGTCATGCAAGTGTCTA+AGG - chr1.1:63553855-63553874 None:intergenic 40.0%
GATGGTCTGAAGAGTAGTAA+TGG + chr1.1:63553345-63553364 MS.gene005419:CDS 40.0%
GATTCATTATGTCGTCATGC+AGG - chr1.1:63553745-63553764 None:intergenic 40.0%
GCATGACGACATAATGAATC+CGG + chr1.1:63553745-63553764 MS.gene005419:CDS 40.0%
GGAACCCTTATACGGATATT+TGG + chr1.1:63554000-63554019 MS.gene005419:CDS 40.0%
GTTCAGCACATTAGTCAATG+AGG + chr1.1:63553784-63553803 MS.gene005419:CDS 40.0%
TGAGTTCAGATGGTCTAAGA+TGG + chr1.1:63553032-63553051 MS.gene005419:CDS 40.0%
TGATACCTCCTTCCAATTTC+CGG - chr1.1:63552878-63552897 None:intergenic 40.0%
TGGTTTGAGGAACCCTTATA+CGG + chr1.1:63553992-63554011 MS.gene005419:CDS 40.0%
TTGATGAAAGCCAGGTCATT+TGG + chr1.1:63553972-63553991 MS.gene005419:CDS 40.0%
! CCTTTGGAGAACGATGAAAA+AGG + chr1.1:63553686-63553705 MS.gene005419:CDS 40.0%
! CTAAGTTTGGTGAGTTCAGA+TGG + chr1.1:63553022-63553041 MS.gene005419:CDS 40.0%
!! AAGGAGGTATCAAAGAACAC+GGG + chr1.1:63552886-63552905 MS.gene005419:CDS 40.0%
!! ATGTCATTATCGGTTCTTCC+AGG - chr1.1:63553246-63553265 None:intergenic 40.0%
!! CCTTTTTCATCGTTCTCCAA+AGG - chr1.1:63553689-63553708 None:intergenic 40.0%
!! GAAGGAGGTATCAAAGAACA+CGG + chr1.1:63552885-63552904 MS.gene005419:CDS 40.0%
!! TCATCGATTTCAGGGAAGAA+GGG + chr1.1:63553657-63553676 MS.gene005419:intron 40.0%
!! TTCATCGATTTCAGGGAAGA+AGG + chr1.1:63553656-63553675 MS.gene005419:intron 40.0%
!!! AACGGACCCTTTTTTACATC+AGG - chr1.1:63552964-63552983 None:intergenic 40.0%
!!! GAAGAAGTTGCCGTTTTAGA+TGG + chr1.1:63552923-63552942 MS.gene005419:CDS 40.0%
ACATGGAACCGGAAATTGGA+AGG + chr1.1:63552867-63552886 MS.gene005419:CDS 45.0%
AGTTCCATGTTGTCAGGGAA+GGG - chr1.1:63553321-63553340 None:intergenic 45.0%
CAACCAGTTCCATGTTGTCA+GGG - chr1.1:63553326-63553345 None:intergenic 45.0%
CTGGAAGAAGGCAATTGCTT+TGG + chr1.1:63553940-63553959 MS.gene005419:CDS 45.0%
GAAGAAGGCAATTGCTTTGG+CGG + chr1.1:63553943-63553962 MS.gene005419:CDS 45.0%
GACAACATGGAACTGGTTGA+TGG + chr1.1:63553327-63553346 MS.gene005419:CDS 45.0%
GCTTCAACATCGTTCTGCAA+AGG - chr1.1:63553719-63553738 None:intergenic 45.0%
GTTCCTCAAACCAAATGACC+TGG - chr1.1:63553985-63554004 None:intergenic 45.0%
TCAACCAGTTCCATGTTGTC+AGG - chr1.1:63553327-63553346 None:intergenic 45.0%
TGATGTTGTGTCTCCATAGG+TGG - chr1.1:63553902-63553921 None:intergenic 45.0%
!! AAGCCAGGTCATTTGGTTTG+AGG + chr1.1:63553979-63553998 MS.gene005419:CDS 45.0%
!!! ATTTAACATATAAATTTTTA+CGG - chr1.1:63553625-63553644 None:intergenic 5.0%
AAGGCAATTGCTTTGGCGGA+AGG + chr1.1:63553947-63553966 MS.gene005419:CDS 50.0%
CAGTTCCATGTTGTCAGGGA+AGG - chr1.1:63553322-63553341 None:intergenic 50.0%
CTTCCCTGACAACATGGAAC+TGG + chr1.1:63553320-63553339 MS.gene005419:CDS 50.0%
GGAAGAAGGGAAGAAGCCTT+TGG + chr1.1:63553670-63553689 MS.gene005419:CDS 50.0%
GTTGTGTCTCCATAGGTGGT+GGG - chr1.1:63553898-63553917 None:intergenic 50.0%
TGGAACCGGAAATTGGAAGG+AGG + chr1.1:63552870-63552889 MS.gene005419:CDS 50.0%
TGTTGTGTCTCCATAGGTGG+TGG - chr1.1:63553899-63553918 None:intergenic 50.0%
! ATGGTCTAAGATGGCTCTCG+AGG + chr1.1:63553041-63553060 MS.gene005419:CDS 50.0%
!! GGAAGGTGTTGATGAAAGCC+AGG + chr1.1:63553964-63553983 MS.gene005419:CDS 50.0%
AACACGGGACTTGCACACTG+TGG + chr1.1:63552901-63552920 MS.gene005419:CDS 55.0%
GTCACCCTTCCCTGACAACA+TGG + chr1.1:63553314-63553333 MS.gene005419:CDS 55.0%
!! GTCTCCATAGGTGGTGGGAG+TGG - chr1.1:63553893-63553912 None:intergenic 60.0%
!! TCCATAGGTGGTGGGAGTGG+AGG - chr1.1:63553890-63553909 None:intergenic 60.0%
GCCTCCACTCCCACCACCTA+TGG + chr1.1:63553886-63553905 MS.gene005419:CDS 65.0%


Chromosome Type Strat End Strand Name
chr1.1 gene 63552775 63554027 63552775 ID=MS.gene005419
chr1.1 mRNA 63552775 63554027 63552775 ID=MS.gene005419.t1;Parent=MS.gene005419
chr1.1 exon 63552775 63553062 63552775 ID=MS.gene005419.t1.exon1;Parent=MS.gene005419.t1
chr1.1 CDS 63552775 63553062 63552775 ID=cds.MS.gene005419.t1;Parent=MS.gene005419.t1
chr1.1 exon 63553240 63553544 63553240 ID=MS.gene005419.t1.exon2;Parent=MS.gene005419.t1
chr1.1 CDS 63553240 63553544 63553240 ID=cds.MS.gene005419.t1;Parent=MS.gene005419.t1
chr1.1 exon 63553670 63554027 63553670 ID=MS.gene005419.t1.exon3;Parent=MS.gene005419.t1
chr1.1 CDS 63553670 63554027 63553670 ID=cds.MS.gene005419.t1;Parent=MS.gene005419.t1
Gene Sequence

>MS.gene005419

ATGAATTCATCGTTGGTTACTAATAAAAGGTTGAAGAATGGAACATTATGGTCAGAAGAAGAAGATGAAATATTAAAAGCATATGTTGAAAAACATGGAACCGGAAATTGGAAGGAGGTATCAAAGAACACGGGACTTGCACACTGTGGAAGAAGTTGCCGTTTTAGATGGTATAATACTTTACGACCTGATGTAAAAAAGGGTCCGTTTAGTAAAGAAGAAGAAGAAAAATTCTTTGAGTTATTTTCTAAGTTTGGTGAGTTCAGATGGTCTAAGATGGCTCTCGAGGTATATTTTTGTTCATGCTTTACTTCTTTTATTTAAAATATTTATCTGTCCTTCTACAACTGCAGCCATATTCATTCGATCACATGTTGTGCAATTTAATTAAATACAATACTATAATATAATATATTTACCACTTGTGTCATTAATTTTAATTTGTATTCATTCTTTTTGTTACAGATGCCTGGAAGAACCGATAATGACATCAAGAACTTTTGGAATGCAAGAAAAAGAAAACATGAAAGACATGGCTTGTCACCCTTCCCTGACAACATGGAACTGGTTGATGGTCTGAAGAGTAGTAATGGAAAAAGAATAAGGAATTCACAAGAAAACAAATTTCAGATACCAGAAGTTAAATTTGGAAATCAAATTCTGCATACAAACTTGTCTGATCTCCCAAATAAGCAGTTTTCAAATATGTTCTTCAATAATGTGGGAAGTACTTCTACAAGCAATCATACTACTTCAACTTTGATTGATAGGTTAGTAGATTATGCAATGCATGCCATTCTCTTTTATATATACATCTATTTGTTACGCTGATATTAATAAGAATTTTCCGTAAAAATTTATATGTTAAATTTACAATTACTTTCATCGATTTCAGGGAAGAAGGGAAGAAGCCTTTGGAGAACGATGAAAAAGGGAAGAAGCCTTTGCAGAACGATGTTGAAGCAAACCTGCATGACGACATAATGAATCCGGAATTTTGGAATGACGCGTTCAGCACATTAGTCAATGAGGTTTACAATGACTTGCATGACAAGCTTCCATATGATTTTAATGATGCCTTAGACACTTGCATGACAATGCAATCGGATCTGCCTCCACTCCCACCACCTATGGAGACACAACATCACATGTCAGAGATAAATAACTGGAAGAAGGCAATTGCTTTGGCGGAAGGTGTTGATGAAAGCCAGGTCATTTGGTTTGAGGAACCCTTATACGGATATTTGGTTTGA
Protein sequence

>MS.gene005419.t1

MNSSLVTNKRLKNGTLWSEEEDEILKAYVEKHGTGNWKEVSKNTGLAHCGRSCRFRWYNTLRPDVKKGPFSKEEEEKFFELFSKFGEFRWSKMALEMPGRTDNDIKNFWNARKRKHERHGLSPFPDNMELVDGLKSSNGKRIRNSQENKFQIPEVKFGNQILHTNLSDLPNKQFSNMFFNNVGSTSTSNHTTSTLIDREEGKKPLENDEKGKKPLQNDVEANLHDDIMNPEFWNDAFSTLVNEVYNDLHDKLPYDFNDALDTCMTMQSDLPPLPPPMETQHHMSEINNWKKAIALAEGVDESQVIWFEEPLYGYLV