AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene005420

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene005420.t1 MTR_1g085770 66.007 303 38 6 1 244 1 297 9.63e-115 333
MS.gene005420.t1 MTR_1g085880 87.940 199 18 2 1 198 1 194 8.00e-110 317
MS.gene005420.t1 MTR_5g088610 50.755 331 78 11 2 272 3 308 6.23e-81 249
MS.gene005420.t1 MTR_5g088080 56.432 241 73 8 12 230 13 243 1.90e-78 240
MS.gene005420.t1 MTR_5g088150 56.432 241 73 8 12 230 13 243 1.90e-78 240
MS.gene005420.t1 MTR_5g488210 56.432 241 73 8 12 230 13 243 1.90e-78 240
MS.gene005420.t1 MTR_5g088640 52.941 272 89 10 12 253 13 275 1.94e-77 238
MS.gene005420.t1 MTR_5g062790 50.350 286 80 10 12 245 10 285 2.12e-76 236
MS.gene005420.t1 MTR_5g488170 55.556 225 71 6 12 216 13 228 4.54e-74 228
MS.gene005420.t1 MTR_4g128190 46.988 249 97 10 1 231 1 232 1.21e-59 191
MS.gene005420.t1 MTR_8g042410 39.196 199 101 6 11 191 37 233 9.90e-39 143
MS.gene005420.t1 MTR_1g083630 44.211 190 91 5 10 187 11 197 2.24e-38 143
MS.gene005420.t1 MTR_1g021230 45.122 164 77 5 11 167 57 214 2.95e-36 135
MS.gene005420.t1 MTR_3g052430 54.310 116 51 2 11 126 41 154 5.14e-36 136
MS.gene005420.t1 MTR_4g091490 52.066 121 55 3 8 127 10 128 2.27e-35 131
MS.gene005420.t1 MTR_3g052450 53.448 116 52 2 11 126 40 153 2.56e-35 134
MS.gene005420.t1 MTR_2g011660 53.846 117 51 3 8 123 10 124 6.22e-35 129
MS.gene005420.t1 MTR_3g011610 48.031 127 63 3 11 136 37 161 7.28e-35 132
MS.gene005420.t1 MTR_2g089620 53.043 115 51 3 11 124 12 124 1.41e-34 128
MS.gene005420.t1 MTR_7g110830 44.444 153 80 4 4 155 5 153 5.53e-34 127
MS.gene005420.t1 MTR_1g017000 34.043 235 128 10 9 228 10 232 5.94e-34 125
MS.gene005420.t1 MTR_2g088170 53.390 118 53 2 11 128 29 144 2.92e-33 127
MS.gene005420.t1 MTR_1g076150 54.286 105 46 2 11 115 12 114 3.54e-33 123
MS.gene005420.t1 MTR_4g065017 53.211 109 49 2 7 115 13 119 4.01e-33 124
MS.gene005420.t1 MTR_1g085040 49.587 121 58 3 4 123 5 123 4.20e-33 125
MS.gene005420.t1 MTR_1g043080 52.336 107 49 2 9 115 10 114 6.13e-33 122
MS.gene005420.t1 MTR_3g461490 50.435 115 54 3 11 124 12 124 7.08e-33 124
MS.gene005420.t1 MTR_5g029840 55.238 105 45 2 11 115 12 114 8.17e-33 124
MS.gene005420.t1 MTR_7g076740 51.282 117 53 4 9 123 10 124 1.20e-32 122
MS.gene005420.t1 MTR_1g085640 40.625 160 86 5 4 162 5 156 2.50e-32 124
MS.gene005420.t1 MTR_5g007370 51.304 115 53 3 11 124 12 124 3.41e-32 121
MS.gene005420.t1 MTR_2g064160 43.357 143 72 4 1 142 1 135 3.81e-32 121
MS.gene005420.t1 MTR_1g043050 52.336 107 49 2 9 115 10 114 6.09e-32 119
MS.gene005420.t1 MTR_3g077110 46.923 130 61 4 9 132 10 137 6.60e-32 122
MS.gene005420.t1 MTR_7g115650 49.524 105 51 2 11 115 12 114 6.80e-32 118
MS.gene005420.t1 MTR_1g100653 47.748 111 56 2 11 121 12 120 7.00e-32 120
MS.gene005420.t1 MTR_8g017440 47.581 124 61 4 4 125 5 126 7.94e-32 121
MS.gene005420.t1 MTR_0251s0050 48.624 109 54 2 11 119 13 119 9.30e-32 119
MS.gene005420.t1 MTR_0008s0390 44.526 137 66 4 11 147 13 139 9.70e-32 119
MS.gene005420.t1 MTR_2g089450 52.381 105 48 2 11 115 12 114 1.02e-31 119
MS.gene005420.t1 MTR_3g074520 49.565 115 55 3 11 124 12 124 1.04e-31 121
MS.gene005420.t1 MTR_7g111290 52.336 107 49 2 4 110 5 109 1.19e-31 122
MS.gene005420.t1 MTR_2g097910 52.381 105 48 2 11 115 20 122 1.54e-31 120
MS.gene005420.t1 MTR_4g478180 50.435 115 54 3 11 124 13 125 1.96e-31 120
MS.gene005420.t1 MTR_1g017140 53.774 106 46 3 11 115 12 115 3.10e-31 120
MS.gene005420.t1 MTR_1g112760 47.107 121 61 3 4 123 6 124 3.41e-31 117
MS.gene005420.t1 MTR_3g028740 50.000 110 53 2 6 115 17 124 3.42e-31 119
MS.gene005420.t1 MTR_4g121460 42.581 155 78 4 11 156 12 164 3.46e-31 119
MS.gene005420.t1 MTR_5g014990 52.830 106 47 3 11 115 12 115 3.60e-31 119
MS.gene005420.t1 MTR_4g105130 46.281 121 62 3 4 123 5 123 9.49e-31 119
MS.gene005420.t1 MTR_6g006030 46.281 121 63 2 11 131 14 132 1.73e-30 114
MS.gene005420.t1 MTR_4g097570 54.455 101 43 3 11 110 12 110 1.91e-30 116
MS.gene005420.t1 MTR_4g082290 48.246 114 56 3 11 123 12 123 1.98e-30 119
MS.gene005420.t1 MTR_8g095390 50.000 108 52 2 17 123 17 123 2.06e-30 117
MS.gene005420.t1 MTR_2g095520 54.902 102 43 3 11 111 12 111 2.17e-30 117
MS.gene005420.t1 MTR_7g102110 52.830 106 47 3 11 115 12 115 2.39e-30 115
MS.gene005420.t1 MTR_7g011170 46.957 115 58 3 11 124 12 124 3.28e-30 116
MS.gene005420.t1 MTR_4g057635 52.830 106 47 3 11 115 12 115 3.29e-30 116
MS.gene005420.t1 MTR_8g098860 28.094 299 170 9 4 299 5 261 3.57e-30 116
MS.gene005420.t1 MTR_4g082230 47.826 115 57 3 10 123 11 123 3.67e-30 118
MS.gene005420.t1 MTR_7g035075 50.000 106 51 2 11 116 14 117 3.90e-30 113
MS.gene005420.t1 MTR_0008s0470 41.379 145 68 4 11 147 13 148 3.96e-30 115
MS.gene005420.t1 MTR_0008s0280 50.000 104 50 2 12 115 13 114 4.12e-30 114
MS.gene005420.t1 MTR_2g034790 38.043 184 106 5 11 193 12 188 7.68e-30 115
MS.gene005420.t1 MTR_3g103570 43.448 145 72 5 11 149 12 152 8.20e-30 116
MS.gene005420.t1 MTR_6g090405 49.107 112 54 3 10 120 11 120 8.70e-30 114
MS.gene005420.t1 MTR_2g089420 42.657 143 66 3 1 143 1 127 9.09e-30 117
MS.gene005420.t1 MTR_5g079670 36.364 154 95 3 1 153 1 152 9.83e-30 112
MS.gene005420.t1 MTR_4g073420 48.148 108 54 2 17 123 17 123 9.99e-30 114
MS.gene005420.t1 MTR_5g010020 47.222 108 55 2 4 111 5 110 1.10e-29 115
MS.gene005420.t1 MTR_2g099740 45.455 121 63 3 4 123 5 123 1.12e-29 117
MS.gene005420.t1 MTR_6g009430 42.553 141 77 4 11 149 12 150 1.64e-29 115
MS.gene005420.t1 MTR_1g110460 36.410 195 112 6 11 202 26 211 1.71e-29 114
MS.gene005420.t1 MTR_8g017500 44.628 121 64 3 4 123 5 123 1.73e-29 115
MS.gene005420.t1 MTR_7g096930 49.524 105 51 2 11 115 12 114 1.82e-29 114
MS.gene005420.t1 MTR_3g097450 48.148 108 54 2 17 123 17 123 1.85e-29 114
MS.gene005420.t1 MTR_6g012690 46.087 115 59 3 11 124 12 124 2.17e-29 115
MS.gene005420.t1 MTR_8g031360 49.533 107 51 3 11 116 13 117 2.23e-29 114
MS.gene005420.t1 MTR_1g086530 46.789 109 56 2 11 119 33 139 3.93e-29 112
MS.gene005420.t1 MTR_8g017540 45.455 121 63 3 4 123 51 169 4.25e-29 115
MS.gene005420.t1 MTR_4g100720 45.133 113 60 2 7 119 9 119 5.60e-29 109
MS.gene005420.t1 MTR_4g128670 51.961 102 46 3 11 111 12 111 8.45e-29 113
MS.gene005420.t1 MTR_4g097570 53.922 102 43 4 11 110 12 111 8.58e-29 112
MS.gene005420.t1 MTR_8g027345 50.526 95 46 1 17 111 17 110 2.22e-28 111
MS.gene005420.t1 MTR_8g017340 42.254 142 73 5 4 138 5 144 2.25e-28 114
MS.gene005420.t1 MTR_6g012180 50.000 100 48 2 11 110 12 109 3.85e-28 111
MS.gene005420.t1 MTR_3g083540 46.491 114 58 3 11 123 41 152 3.94e-28 110
MS.gene005420.t1 MTR_8g020490 48.544 103 51 2 9 111 6 106 6.54e-28 108
MS.gene005420.t1 MTR_0063s0090 38.621 145 81 3 11 155 12 148 6.65e-28 108
MS.gene005420.t1 MTR_7g117730 47.368 95 49 1 17 111 17 110 6.98e-28 108
MS.gene005420.t1 MTR_2g067420 51.961 102 47 2 10 111 13 112 7.54e-28 110
MS.gene005420.t1 MTR_0140s0030 49.057 106 51 3 11 115 13 116 7.55e-28 110
MS.gene005420.t1 MTR_0489s0020 49.057 106 51 3 11 115 13 116 7.55e-28 110
MS.gene005420.t1 MTR_8g017350 41.549 142 74 5 4 138 5 144 8.83e-28 113
MS.gene005420.t1 MTR_4g125520 48.515 101 50 2 11 111 12 110 1.09e-27 109
MS.gene005420.t1 MTR_1g073170 45.536 112 59 2 4 115 13 122 1.14e-27 108
MS.gene005420.t1 MTR_3g039990 47.619 105 53 2 11 115 13 115 1.81e-27 109
MS.gene005420.t1 MTR_4g029540 36.872 179 100 6 11 178 10 186 1.95e-27 108
MS.gene005420.t1 MTR_4g485530 48.544 103 51 2 13 115 14 114 2.09e-27 105
MS.gene005420.t1 MTR_7g087130 46.667 105 54 2 11 115 12 114 2.53e-27 109
MS.gene005420.t1 MTR_7g010210 46.667 105 54 2 11 115 12 114 2.78e-27 107
MS.gene005420.t1 MTR_1g062940 40.876 137 79 2 11 147 6 140 3.47e-27 106
MS.gene005420.t1 MTR_6g055910 45.536 112 59 2 6 117 9 118 4.48e-27 107
MS.gene005420.t1 MTR_7g010210 46.667 105 54 2 11 115 12 114 5.85e-27 108
MS.gene005420.t1 MTR_8g017390 45.133 113 59 3 4 115 5 115 8.07e-27 109
MS.gene005420.t1 MTR_3g065440 44.167 120 64 3 11 129 12 129 1.06e-26 107
MS.gene005420.t1 MTR_5g078140 46.087 115 59 3 11 124 12 124 1.08e-26 107
MS.gene005420.t1 MTR_1g100667 46.789 109 56 2 7 115 9 115 1.61e-26 105
MS.gene005420.t1 MTR_1g086510 44.037 109 59 2 11 119 21 127 2.62e-26 105
MS.gene005420.t1 MTR_4g102380 44.348 115 61 3 11 124 12 124 2.77e-26 105
MS.gene005420.t1 MTR_5g042030 45.614 114 59 3 11 123 7 118 3.07e-26 105
MS.gene005420.t1 MTR_7g109320 53.465 101 45 2 11 111 12 110 5.72e-26 105
MS.gene005420.t1 MTR_1g045610 46.465 99 52 1 17 115 26 123 1.13e-25 103
MS.gene005420.t1 MTR_4g063100 44.144 111 60 2 5 115 1 109 2.13e-25 102
MS.gene005420.t1 MTR_0197s0010 44.898 98 53 1 14 111 3 99 2.57e-25 101
MS.gene005420.t1 MTR_0247s0040 45.192 104 55 2 11 114 7 108 4.71e-25 99.4
MS.gene005420.t1 MTR_5g078910 42.991 107 59 2 9 115 5 109 9.35e-25 101
MS.gene005420.t1 MTR_8g006470 44.954 109 57 3 11 118 10 116 1.25e-24 100
MS.gene005420.t1 MTR_2g033170 45.872 109 57 2 11 119 24 130 1.86e-24 101
MS.gene005420.t1 MTR_5g079120 44.037 109 58 3 8 115 57 163 3.68e-24 100
MS.gene005420.t1 MTR_5g078930 41.346 104 60 1 8 111 5 107 5.08e-24 97.8
MS.gene005420.t1 MTR_0193s0090 38.168 131 74 3 11 136 7 135 1.02e-23 96.7
MS.gene005420.t1 MTR_5g079290 40.952 105 60 2 11 115 17 119 4.07e-23 96.3
MS.gene005420.t1 MTR_2g096380 42.727 110 61 2 6 115 1 108 4.17e-23 95.9
MS.gene005420.t1 MTR_5g078950 40.187 107 63 1 8 114 3 108 1.09e-22 95.1
MS.gene005420.t1 MTR_3g101290 42.453 106 59 2 17 122 40 143 1.26e-22 94.4
MS.gene005420.t1 MTR_8g060940 42.424 99 55 2 11 109 7 103 3.75e-22 93.2
MS.gene005420.t1 MTR_5g079220 40.187 107 62 2 9 115 19 123 4.76e-22 93.6
MS.gene005420.t1 MTR_5g016510 46.000 100 51 3 17 115 8 105 8.68e-22 94.0
MS.gene005420.t1 MTR_5g078860 41.905 105 59 2 11 115 7 109 9.47e-22 93.6
MS.gene005420.t1 MTR_4g123040 44.762 105 56 2 11 115 24 126 2.70e-21 92.4
MS.gene005420.t1 MTR_6g015455 46.809 94 48 2 17 110 8 99 2.75e-21 94.7
MS.gene005420.t1 MTR_7g111290 56.716 67 28 1 44 110 2 67 2.99e-21 92.8
MS.gene005420.t1 MTR_5g078800 41.905 105 59 2 11 115 7 109 3.17e-21 91.3
MS.gene005420.t1 MTR_7g017260 41.748 103 56 3 11 111 25 125 4.93e-21 90.9
MS.gene005420.t1 MTR_3g045430 37.398 123 74 3 2 123 4 124 6.31e-21 91.3
MS.gene005420.t1 MTR_3g463400 41.441 111 62 3 6 116 126 233 1.21e-20 92.0
MS.gene005420.t1 MTR_0001s0360 38.318 107 64 2 9 115 5 109 1.28e-20 89.4
MS.gene005420.t1 MTR_5g070020 42.202 109 60 3 7 115 116 221 1.62e-20 90.9
MS.gene005420.t1 MTR_4g019370 40.000 105 61 2 17 121 41 143 4.10e-20 89.7
MS.gene005420.t1 MTR_7g035350 44.444 99 53 2 16 114 227 323 6.24e-20 90.1
MS.gene005420.t1 MTR_3g077650 39.640 111 63 3 17 125 184 292 6.33e-20 90.1
MS.gene005420.t1 MTR_4g105660 28.216 241 141 8 17 229 183 419 1.06e-19 89.4
MS.gene005420.t1 MTR_5g007300 51.316 76 36 1 11 86 64 138 1.91e-19 83.2
MS.gene005420.t1 MTR_5g049190 37.398 123 73 3 17 139 22 140 3.04e-19 85.5
MS.gene005420.t1 MTR_6g027340 38.679 106 63 2 17 122 19 122 3.59e-19 84.3
MS.gene005420.t1 MTR_6g055910 49.315 73 36 1 45 117 18 89 4.90e-19 85.1
MS.gene005420.t1 MTR_4g063100 51.389 72 34 1 44 115 10 80 9.14e-19 83.6
MS.gene005420.t1 MTR_6g074860 41.176 102 55 3 17 115 7 106 1.82e-18 83.2
MS.gene005420.t1 MTR_4g094982 43.000 100 54 3 17 115 8 105 2.37e-18 83.6
MS.gene005420.t1 MTR_6g027360 36.752 117 71 3 8 124 73 186 5.43e-18 83.2
MS.gene005420.t1 MTR_5g010650 41.905 105 58 3 6 110 103 204 8.13e-18 84.0
MS.gene005420.t1 MTR_7g451170 39.000 100 59 2 17 116 194 291 8.39e-18 83.6
MS.gene005420.t1 MTR_2g096380 50.000 72 35 1 44 115 19 89 1.41e-17 80.1
MS.gene005420.t1 MTR_4g088015 40.000 100 58 2 17 116 224 321 1.96e-17 82.8
MS.gene005420.t1 MTR_5g082910 41.053 95 54 2 17 111 22 114 3.73e-17 80.5
MS.gene005420.t1 MTR_3g110028 39.091 110 64 3 6 115 78 184 6.76e-17 81.6
MS.gene005420.t1 MTR_3g110028 37.383 107 55 3 9 110 29 128 5.06e-15 75.9
MS.gene005420.t1 MTR_7g037260 36.634 101 62 2 17 117 148 246 1.64e-16 79.3
MS.gene005420.t1 MTR_1g026870 37.273 110 66 3 6 115 78 184 2.56e-16 80.1
MS.gene005420.t1 MTR_1g026870 36.449 107 56 3 9 110 29 128 1.07e-14 75.1
MS.gene005420.t1 MTR_7g061330 33.548 155 93 5 6 153 106 257 2.56e-16 79.7
MS.gene005420.t1 MTR_7g061330 35.577 104 58 3 9 109 58 155 2.59e-13 70.5
MS.gene005420.t1 MTR_7g461410 33.548 155 93 5 6 153 106 257 2.56e-16 79.7
MS.gene005420.t1 MTR_7g461410 35.577 104 58 3 9 109 58 155 2.59e-13 70.5
MS.gene005420.t1 MTR_7g061330 33.548 155 93 5 6 153 70 221 2.74e-16 79.3
MS.gene005420.t1 MTR_7g061330 35.577 104 58 3 9 109 22 119 2.94e-13 70.5
MS.gene005420.t1 MTR_7g061550 37.500 104 62 2 17 118 10 112 2.92e-16 78.6
MS.gene005420.t1 MTR_1g057980 38.462 104 61 3 11 114 78 178 4.68e-16 77.4
MS.gene005420.t1 MTR_4g082040 37.500 104 60 3 17 117 108 209 2.10e-15 76.6
MS.gene005420.t1 MTR_7g450950 36.735 98 60 2 17 114 160 255 3.46e-15 75.5
MS.gene005420.t1 MTR_3g089045 38.462 104 59 3 17 117 19 120 6.07e-15 74.3
MS.gene005420.t1 MTR_5g038910 34.307 137 83 3 7 143 19 148 6.23e-15 75.1
MS.gene005420.t1 MTR_5g038910 34.307 137 83 3 7 143 19 148 7.38e-15 75.1
MS.gene005420.t1 MTR_5g041570 36.538 104 61 3 17 117 137 238 7.94e-15 75.1
MS.gene005420.t1 MTR_7g037130 36.735 98 60 2 17 114 148 243 1.09e-14 73.9
MS.gene005420.t1 MTR_6g027370 35.043 117 74 2 8 124 93 207 2.49e-14 73.2
MS.gene005420.t1 MTR_7g086960 30.769 156 106 2 17 172 92 245 5.72e-14 72.0
MS.gene005420.t1 MTR_0023s0210 42.254 71 40 1 11 81 7 76 1.63e-13 65.5
MS.gene005420.t1 MTR_8g468380 32.174 115 76 2 7 121 15 127 8.20e-13 68.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene005420.t1 AT2G26960 44.654 159 77 4 9 158 18 174 1.12e-38 141
MS.gene005420.t1 AT5G55020 51.261 119 56 2 11 129 26 142 7.98e-37 138
MS.gene005420.t1 AT2G32460 42.236 161 81 3 6 166 1 149 1.02e-36 137
MS.gene005420.t1 AT2G32460 41.212 165 85 3 2 166 9 161 1.25e-36 137
MS.gene005420.t1 AT5G06100 54.783 115 50 2 11 125 32 144 1.99e-36 135
MS.gene005420.t1 AT3G11440 52.000 125 56 3 11 135 41 161 3.03e-36 135
MS.gene005420.t1 AT5G06100 54.783 115 50 2 11 125 32 144 3.34e-36 136
MS.gene005420.t1 AT5G06100 54.783 115 50 2 11 125 32 144 3.34e-36 136
MS.gene005420.t1 AT5G06100 54.783 115 50 2 11 125 32 144 3.34e-36 136
MS.gene005420.t1 AT5G06100 54.783 115 50 2 11 125 32 144 3.34e-36 136
MS.gene005420.t1 AT3G11440 52.542 118 54 2 11 128 41 156 8.29e-36 135
MS.gene005420.t1 AT3G11440 52.542 118 54 2 11 128 41 156 8.29e-36 135
MS.gene005420.t1 AT3G11440 52.542 118 54 2 11 128 41 156 8.29e-36 135
MS.gene005420.t1 AT2G26950 44.604 139 76 1 5 143 9 146 1.30e-35 132
MS.gene005420.t1 AT4G21440 55.263 114 48 3 11 123 12 123 3.12e-35 130
MS.gene005420.t1 AT4G26930 50.435 115 55 2 11 125 19 131 3.96e-35 131
MS.gene005420.t1 AT5G54230 41.420 169 92 4 11 174 12 178 9.06e-35 129
MS.gene005420.t1 AT5G26660 50.413 121 57 3 4 123 5 123 4.83e-34 127
MS.gene005420.t1 AT4G01680 42.466 146 81 3 4 148 5 148 1.09e-33 124
MS.gene005420.t1 AT4G28110 52.174 115 52 3 11 124 12 124 5.11e-33 123
MS.gene005420.t1 AT4G01680 42.466 146 81 3 4 148 5 148 6.19e-33 124
MS.gene005420.t1 AT4G05100 52.632 114 51 3 11 123 13 124 7.58e-33 124
MS.gene005420.t1 AT1G57560 49.180 122 59 3 4 124 5 124 1.03e-32 122
MS.gene005420.t1 AT1G57560 49.180 122 59 3 4 124 5 124 2.40e-32 122
MS.gene005420.t1 AT3G61250 49.123 114 55 3 11 123 12 123 4.31e-32 121
MS.gene005420.t1 AT5G10280 48.780 123 60 3 3 124 4 124 4.73e-32 122
MS.gene005420.t1 AT5G56110 48.696 115 56 3 11 124 12 124 6.14e-32 121
MS.gene005420.t1 AT4G37780 52.830 106 47 3 11 115 12 115 1.01e-31 120
MS.gene005420.t1 AT5G16770 51.429 105 49 2 11 115 12 114 1.23e-31 120
MS.gene005420.t1 AT5G16770 51.429 105 49 2 11 115 12 114 1.23e-31 120
MS.gene005420.t1 AT3G08500 51.887 106 49 2 10 115 29 132 1.54e-31 120
MS.gene005420.t1 AT1G09540 48.760 121 59 3 4 123 5 123 2.36e-31 120
MS.gene005420.t1 AT5G16770 51.429 105 49 2 11 115 12 114 2.76e-31 120
MS.gene005420.t1 AT5G16770 51.429 105 49 2 11 115 12 114 2.76e-31 120
MS.gene005420.t1 AT5G12870 51.402 107 50 2 9 115 16 120 3.63e-31 118
MS.gene005420.t1 AT5G65230 51.304 115 53 3 11 124 12 124 4.74e-31 119
MS.gene005420.t1 AT1G74080 38.043 184 85 7 11 170 12 190 4.86e-31 119
MS.gene005420.t1 AT3G12720 45.455 121 63 3 10 129 21 139 7.58e-31 118
MS.gene005420.t1 AT3G02940 51.429 105 49 2 11 115 12 114 9.10e-31 118
MS.gene005420.t1 AT3G13890 47.321 112 57 2 4 115 5 114 1.48e-30 118
MS.gene005420.t1 AT1G22640 48.246 114 56 3 11 123 12 123 2.01e-30 115
MS.gene005420.t1 AT3G02940 51.429 105 49 2 11 115 12 114 2.09e-30 117
MS.gene005420.t1 AT3G02940 51.429 105 49 2 11 115 12 114 2.09e-30 117
MS.gene005420.t1 AT3G23250 49.524 105 51 2 11 115 12 114 2.11e-30 116
MS.gene005420.t1 AT4G09460 48.148 108 54 2 17 123 17 123 2.19e-30 115
MS.gene005420.t1 AT4G38620 50.000 108 52 2 17 123 17 123 2.39e-30 116
MS.gene005420.t1 AT1G06180 50.459 109 52 2 11 119 12 118 2.42e-30 115
MS.gene005420.t1 AT3G49690 53.774 106 46 3 11 115 12 115 2.51e-30 117
MS.gene005420.t1 AT1G18710 46.087 115 59 3 11 124 12 124 2.74e-30 115
MS.gene005420.t1 AT5G15310 46.957 115 58 3 11 124 12 124 2.87e-30 115
MS.gene005420.t1 AT5G23000 51.402 107 49 3 10 115 11 115 3.11e-30 117
MS.gene005420.t1 AT3G01140 46.957 115 58 3 11 124 12 124 3.23e-30 117
MS.gene005420.t1 AT3G13540 45.528 123 64 3 2 123 14 134 3.99e-30 114
MS.gene005420.t1 AT3G01140 46.957 115 58 3 11 124 55 167 4.12e-30 117
MS.gene005420.t1 AT1G35515 49.074 108 53 2 17 123 17 123 5.76e-30 113
MS.gene005420.t1 AT1G34670 49.565 115 55 3 11 124 12 124 8.05e-30 116
MS.gene005420.t1 AT5G57620 51.887 106 48 3 11 115 12 115 8.19e-30 115
MS.gene005420.t1 AT1G16490 50.000 106 51 2 10 115 13 116 9.03e-30 114
MS.gene005420.t1 AT3G28470 53.465 101 45 2 11 111 12 110 9.33e-30 115
MS.gene005420.t1 AT5G14750 50.000 104 50 2 8 111 13 114 9.57e-30 112
MS.gene005420.t1 AT4G17785 50.000 108 52 2 8 115 10 115 9.74e-30 116
MS.gene005420.t1 AT5G15310 46.957 115 58 3 11 124 12 124 1.00e-29 115
MS.gene005420.t1 AT4G17785 50.000 108 52 2 8 115 10 115 1.04e-29 116
MS.gene005420.t1 AT5G15310 46.957 115 58 3 11 124 12 124 1.21e-29 115
MS.gene005420.t1 AT1G56160 50.000 106 51 2 10 115 13 116 1.23e-29 114
MS.gene005420.t1 AT4G34990 48.148 108 54 2 17 123 17 123 1.23e-29 114
MS.gene005420.t1 AT3G27810 50.000 106 51 2 11 116 20 123 1.28e-29 112
MS.gene005420.t1 AT1G63910 46.957 115 59 2 4 118 5 117 1.30e-29 116
MS.gene005420.t1 AT2G36890 47.414 116 58 3 11 125 12 125 1.33e-29 114
MS.gene005420.t1 AT4G01680 39.241 158 81 4 4 148 5 160 1.94e-29 115
MS.gene005420.t1 AT5G40350 49.057 106 52 2 11 116 17 120 2.11e-29 112
MS.gene005420.t1 AT2G16720 48.148 108 54 2 17 123 17 123 2.16e-29 113
MS.gene005420.t1 AT2G36890 47.414 116 58 3 11 125 53 166 2.32e-29 115
MS.gene005420.t1 AT1G79180 46.610 118 59 3 10 125 13 128 2.34e-29 114
MS.gene005420.t1 AT5G65790 52.830 106 47 3 11 115 12 115 3.08e-29 115
MS.gene005420.t1 AT3G27920 49.074 108 53 2 8 115 11 116 5.33e-29 111
MS.gene005420.t1 AT2G31180 47.619 105 53 2 11 115 12 114 6.76e-29 111
MS.gene005420.t1 AT3G12820 49.057 106 52 2 10 115 13 116 7.75e-29 111
MS.gene005420.t1 AT3G01530 43.590 117 61 2 4 116 13 128 1.02e-28 110
MS.gene005420.t1 AT1G18570 45.217 115 60 3 11 124 13 125 1.11e-28 113
MS.gene005420.t1 AT1G74650 47.619 105 53 2 11 115 12 114 1.76e-28 112
MS.gene005420.t1 AT1G74430 45.217 115 60 3 11 124 12 124 2.14e-28 110
MS.gene005420.t1 AT2G47190 46.789 109 56 2 11 119 20 126 2.17e-28 110
MS.gene005420.t1 AT1G48000 48.039 102 52 1 17 118 37 137 2.22e-28 110
MS.gene005420.t1 AT5G40330 49.038 104 51 2 12 115 13 114 2.65e-28 109
MS.gene005420.t1 AT5G52600 48.515 101 50 2 11 111 12 110 3.36e-28 108
MS.gene005420.t1 AT2G47460 50.495 101 48 2 11 111 12 110 3.52e-28 112
MS.gene005420.t1 AT5G62470 43.478 138 70 4 11 147 12 142 3.97e-28 111
MS.gene005420.t1 AT5G14340 47.368 114 57 3 11 123 24 135 8.23e-28 109
MS.gene005420.t1 AT3G62610 45.455 121 63 3 11 130 12 130 8.45e-28 110
MS.gene005420.t1 AT5G62320 46.281 121 55 4 11 123 13 131 9.07e-28 108
MS.gene005420.t1 AT5G16600 47.826 115 57 3 11 124 12 124 1.19e-27 110
MS.gene005420.t1 AT5G49330 50.495 101 48 2 11 111 12 110 1.19e-27 110
MS.gene005420.t1 AT3G13890 43.802 121 57 3 4 115 5 123 1.19e-27 110
MS.gene005420.t1 AT5G60890 44.954 109 58 2 11 119 12 118 1.34e-27 109
MS.gene005420.t1 AT3G47600 46.667 105 54 2 11 115 12 114 1.54e-27 109
MS.gene005420.t1 AT1G66230 41.912 136 76 3 11 145 12 145 1.78e-27 108
MS.gene005420.t1 AT5G07690 46.667 105 54 2 11 115 12 114 2.11e-27 109
MS.gene005420.t1 AT1G08810 46.667 105 54 2 11 115 12 114 2.36e-27 108
MS.gene005420.t1 AT1G25340 46.602 103 54 1 17 119 23 124 2.61e-27 108
MS.gene005420.t1 AT3G28910 47.619 105 53 2 11 115 12 114 2.67e-27 108
MS.gene005420.t1 AT5G35550 44.737 114 61 2 2 115 5 116 3.22e-27 107
MS.gene005420.t1 AT5G61420 43.478 115 62 3 11 124 12 124 5.71e-27 108
MS.gene005420.t1 AT5G07700 45.714 105 55 2 11 115 12 114 6.23e-27 108
MS.gene005420.t1 AT5G07700 45.714 105 55 2 11 115 12 114 6.23e-27 108
MS.gene005420.t1 AT5G62470 43.478 138 69 5 11 147 12 141 1.06e-26 107
MS.gene005420.t1 AT1G68320 34.000 200 114 6 8 193 16 211 1.89e-26 105
MS.gene005420.t1 AT3G60460 44.954 109 57 3 11 118 11 117 6.76e-26 104
MS.gene005420.t1 AT4G13480 48.485 99 50 1 17 115 11 108 1.25e-25 103
MS.gene005420.t1 AT4G22680 45.217 115 60 3 11 124 12 124 1.60e-25 103
MS.gene005420.t1 AT4G12350 43.478 115 64 1 1 115 1 114 3.56e-25 102
MS.gene005420.t1 AT3G24310 46.465 99 52 1 17 115 23 120 4.40e-25 102
MS.gene005420.t1 AT3G30210 44.118 102 56 1 17 118 32 132 7.20e-25 101
MS.gene005420.t1 AT5G26660 55.000 80 34 2 45 123 14 92 2.98e-24 100
MS.gene005420.t1 AT3G53200 45.794 107 56 2 11 117 9 113 3.55e-24 98.6
MS.gene005420.t1 AT3G06490 47.706 109 55 2 11 119 19 125 4.98e-24 100
MS.gene005420.t1 AT3G48920 42.727 110 62 1 6 115 12 120 7.53e-24 98.6
MS.gene005420.t1 AT5G59780 40.336 119 69 2 6 124 3 119 8.60e-24 97.8
MS.gene005420.t1 AT1G25340 44.660 103 51 2 17 119 23 119 1.03e-23 98.6
MS.gene005420.t1 AT1G79180 37.086 151 58 4 10 125 13 161 1.28e-23 99.0
MS.gene005420.t1 AT3G46130 45.455 99 53 1 17 115 14 111 1.31e-23 97.8
MS.gene005420.t1 AT1G25340 44.660 103 51 2 17 119 23 119 1.44e-23 98.6
MS.gene005420.t1 AT1G66370 41.818 110 61 3 9 117 6 113 2.40e-23 96.7
MS.gene005420.t1 AT1G66380 41.964 112 62 3 7 117 4 113 3.72e-23 93.2
MS.gene005420.t1 AT5G52260 40.278 144 83 2 1 142 1 143 4.97e-23 96.3
MS.gene005420.t1 AT4G25560 43.925 107 58 2 9 115 8 112 9.83e-23 95.9
MS.gene005420.t1 AT5G49620 45.631 103 55 1 17 119 31 132 1.45e-22 95.9
MS.gene005420.t1 AT1G66390 41.071 112 63 3 7 117 4 113 2.93e-22 94.0
MS.gene005420.t1 AT1G56650 37.500 128 69 4 7 125 4 129 3.16e-22 93.6
MS.gene005420.t1 AT3G50060 42.453 106 59 2 17 122 9 112 5.86e-22 94.0
MS.gene005420.t1 AT4G18770 40.146 137 73 5 9 139 208 341 1.79e-21 94.4
MS.gene005420.t1 AT5G40350 52.703 74 34 1 43 116 3 75 2.46e-21 89.4
MS.gene005420.t1 AT5G49620 41.379 116 55 1 17 119 31 146 2.59e-21 92.4
MS.gene005420.t1 AT3G27785 43.689 103 55 3 17 118 192 292 5.51e-21 93.2
MS.gene005420.t1 AT3G27810 54.167 72 32 1 45 116 4 74 6.58e-21 88.2
MS.gene005420.t1 AT4G37260 43.925 107 57 3 17 122 16 120 8.97e-21 91.3
MS.gene005420.t1 AT5G67300 46.000 100 51 3 17 115 9 106 3.91e-20 89.0
MS.gene005420.t1 AT5G58850 42.727 110 60 3 7 116 99 205 5.21e-20 90.1
MS.gene005420.t1 AT2G23290 44.000 100 53 3 17 115 16 113 7.94e-20 88.2
MS.gene005420.t1 AT5G40360 41.414 99 56 2 17 115 161 257 1.11e-19 88.6
MS.gene005420.t1 AT1G17950 40.367 109 61 3 17 123 8 114 9.71e-19 84.3
MS.gene005420.t1 AT2G25230 36.842 133 75 5 5 130 13 143 1.42e-18 83.6
MS.gene005420.t1 AT3G53200 50.685 73 35 1 45 117 9 80 1.50e-18 82.8
MS.gene005420.t1 AT5G35550 51.316 76 36 1 40 115 45 119 1.66e-18 84.0
MS.gene005420.t1 AT5G11050 36.957 138 81 4 9 143 101 235 2.19e-18 85.5
MS.gene005420.t1 AT3G12820 53.731 67 30 1 49 115 3 68 2.99e-18 81.6
MS.gene005420.t1 AT2G39880 38.931 131 77 3 17 146 53 181 4.00e-18 84.3
MS.gene005420.t1 AT4G33450 38.679 106 63 2 17 122 22 125 4.43e-18 82.4
MS.gene005420.t1 AT5G14750 44.578 83 40 2 38 115 3 84 8.21e-18 79.7
MS.gene005420.t1 AT3G46130 50.000 72 35 1 44 115 9 79 1.91e-17 80.1
MS.gene005420.t1 AT3G55730 39.623 106 62 2 10 115 52 155 2.59e-17 82.0
MS.gene005420.t1 AT5G59780 46.250 80 42 1 45 124 20 98 6.12e-17 78.6
MS.gene005420.t1 AT3G46130 50.704 71 34 1 45 115 20 89 6.88e-17 79.0
MS.gene005420.t1 AT3G09230 36.000 100 62 2 17 116 58 155 1.55e-16 79.7
MS.gene005420.t1 AT3G09370 35.374 147 91 4 6 151 128 271 1.73e-16 80.1
MS.gene005420.t1 AT3G09370 37.624 101 60 2 9 109 80 177 1.70e-14 74.3
MS.gene005420.t1 AT3G47600 47.887 71 36 1 45 115 39 108 1.92e-16 79.0
MS.gene005420.t1 AT3G09370 35.374 147 91 4 6 151 123 266 1.98e-16 80.1
MS.gene005420.t1 AT3G09370 37.624 101 60 2 9 109 75 172 1.82e-14 73.9
MS.gene005420.t1 AT3G09370 35.374 147 91 4 6 151 136 279 2.22e-16 79.7
MS.gene005420.t1 AT3G09370 37.255 102 61 2 9 110 88 186 2.60e-14 73.6
MS.gene005420.t1 AT5G17800 34.815 135 78 4 17 143 96 228 2.69e-16 78.6
MS.gene005420.t1 AT4G32730 38.182 110 65 3 6 115 80 186 3.98e-16 79.3
MS.gene005420.t1 AT4G32730 35.514 107 57 3 9 110 31 130 6.68e-14 72.8
MS.gene005420.t1 AT4G32730 38.182 110 65 3 6 115 80 186 4.72e-16 79.3
MS.gene005420.t1 AT4G32730 35.514 107 57 3 9 110 31 130 7.62e-14 72.4
MS.gene005420.t1 AT4G32730 38.182 110 65 3 6 115 80 186 4.72e-16 79.3
MS.gene005420.t1 AT4G32730 35.514 107 57 3 9 110 31 130 7.62e-14 72.4
MS.gene005420.t1 AT4G32730 38.182 110 65 3 6 115 80 186 4.72e-16 79.3
MS.gene005420.t1 AT4G32730 35.514 107 57 3 9 110 31 130 7.62e-14 72.4
MS.gene005420.t1 AT4G32730 38.182 110 65 3 6 115 80 186 4.72e-16 79.3
MS.gene005420.t1 AT4G32730 35.514 107 57 3 9 110 31 130 7.62e-14 72.4
MS.gene005420.t1 AT5G11510 27.778 288 179 13 6 287 74 338 9.91e-16 78.2
MS.gene005420.t1 AT5G11510 35.294 102 64 2 9 110 25 124 2.89e-13 70.9
MS.gene005420.t1 AT5G11510 36.364 110 67 3 6 115 74 180 1.24e-15 77.8
MS.gene005420.t1 AT5G11510 35.294 102 64 2 9 110 25 124 2.75e-13 70.9
MS.gene005420.t1 AT5G11510 36.364 110 67 3 6 115 74 180 1.30e-15 77.8
MS.gene005420.t1 AT5G11510 35.294 102 64 2 9 110 25 124 2.75e-13 70.9
MS.gene005420.t1 AT5G11510 36.364 110 67 3 6 115 74 180 1.30e-15 77.8
MS.gene005420.t1 AT5G11510 35.294 102 64 2 9 110 25 124 2.75e-13 70.9
MS.gene005420.t1 AT5G11510 36.364 110 67 3 6 115 74 180 1.30e-15 77.8
MS.gene005420.t1 AT5G11510 35.294 102 64 2 9 110 25 124 2.75e-13 70.9
MS.gene005420.t1 AT1G26780 36.190 105 64 3 17 120 101 203 1.39e-15 75.9
MS.gene005420.t1 AT2G37630 38.182 110 65 2 11 118 1 109 1.39e-15 77.0
MS.gene005420.t1 AT1G26780 36.538 104 63 3 17 119 101 202 1.46e-15 76.6
MS.gene005420.t1 AT1G66380 46.667 75 38 2 44 117 7 80 1.78e-15 71.6
MS.gene005420.t1 AT1G73410 39.252 107 63 2 17 123 9 113 1.83e-15 75.1
MS.gene005420.t1 AT1G73410 39.252 107 63 2 17 123 9 113 1.84e-15 73.9
MS.gene005420.t1 AT1G69560 36.842 95 58 2 17 111 126 218 1.90e-15 76.3
MS.gene005420.t1 AT1G69560 36.842 95 58 2 17 111 110 202 1.90e-15 76.3
MS.gene005420.t1 AT5G02320 37.273 110 66 3 6 115 120 226 2.56e-15 76.6
MS.gene005420.t1 AT5G02320 35.849 106 57 3 9 110 72 170 5.43e-14 72.8
MS.gene005420.t1 AT5G02320 37.273 110 66 3 6 115 120 226 2.56e-15 76.6
MS.gene005420.t1 AT5G02320 35.849 106 57 3 9 110 72 170 5.43e-14 72.8
MS.gene005420.t1 AT5G02320 37.273 110 66 3 6 115 60 166 2.63e-15 76.6
MS.gene005420.t1 AT5G02320 36.275 102 62 2 9 110 12 110 6.14e-14 72.4
MS.gene005420.t1 AT4G00540 35.971 139 78 6 6 140 96 227 3.19e-15 75.9
MS.gene005420.t1 AT4G00540 35.971 139 78 6 6 140 94 225 3.69e-15 75.9
MS.gene005420.t1 AT1G14350 36.283 113 70 2 7 119 18 128 1.47e-14 74.3
MS.gene005420.t1 AT1G14350 36.283 113 70 2 7 119 18 128 1.47e-14 74.3
MS.gene005420.t1 AT3G29020 37.500 104 60 3 17 117 68 169 2.95e-14 71.2
MS.gene005420.t1 AT3G29020 37.500 104 60 3 17 117 70 171 3.95e-14 72.0
MS.gene005420.t1 AT2G02820 35.398 113 71 2 7 119 23 133 4.18e-14 72.8
MS.gene005420.t1 AT2G02820 35.398 113 71 2 7 119 23 133 4.42e-14 72.8
MS.gene005420.t1 AT2G02820 37.864 103 62 2 17 119 33 133 9.26e-14 71.2
MS.gene005420.t1 AT5G40430 36.283 113 65 4 7 115 43 152 1.68e-13 69.7
MS.gene005420.t1 AT1G66380 41.176 68 39 1 7 74 4 70 5.40e-13 64.7
MS.gene005420.t1 AT3G18100 39.604 101 52 4 12 109 384 478 1.34e-12 68.6
MS.gene005420.t1 AT1G22640 50.000 66 31 2 59 123 2 66 1.36e-12 65.9
MS.gene005420.t1 AT3G18100 39.604 101 52 4 12 109 332 426 1.55e-12 68.6
MS.gene005420.t1 AT3G18100 39.604 101 52 4 12 109 497 591 1.61e-12 68.6
MS.gene005420.t1 AT3G18100 39.604 101 52 4 12 109 545 639 1.78e-12 68.6
MS.gene005420.t1 AT5G39700 36.893 103 63 2 9 111 51 151 7.54e-12 63.5
MS.gene005420.t1 AT3G23250 49.123 57 28 1 59 115 2 57 2.08e-11 63.2
MS.gene005420.t1 AT1G18960 34.343 99 61 3 17 115 13 107 6.87e-11 62.4

Find 58 sgRNAs with CRISPR-Local

Find 113 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATATTTGAAAACTGCTTATT+TGG 0.104393 1.1:-63583236 None:intergenic
ACATAATGAATCCGGAATTT+TGG 0.151632 1.1:+63583524 MS.gene005420:CDS
CAGATACCAGAAGTTAAATT+TGG 0.178249 1.1:+63583179 MS.gene005420:CDS
CATCGTTGGTTACTAATAAA+AGG 0.216843 1.1:+63582556 MS.gene005420:CDS
CTACTTCAACTTTGATTGAT+AGG 0.246409 1.1:+63583300 MS.gene005420:CDS
GCCTCCACTCCCACCACTTA+TGG 0.273312 1.1:+63583657 MS.gene005420:CDS
AAAGTTCTTGATGTCATTAT+CGG 0.301665 1.1:-63583027 None:intergenic
CCTTTGGAGAACGATGAAAA+AGG 0.312790 1.1:+63583457 MS.gene005420:CDS
ATAATGACATCAAGAACTTT+TGG 0.313765 1.1:+63583030 MS.gene005420:CDS
CATTGTCATGCAAGTGTCTA+AGG 0.322693 1.1:-63583623 None:intergenic
ACCAGTTCCATTATGTTGTC+AGG 0.338387 1.1:-63583098 None:intergenic
ATGTCATTATCGGTTCTTCC+AGG 0.362890 1.1:-63583017 None:intergenic
TATTTGAAAACTGCTTATTT+GGG 0.371336 1.1:-63583235 None:intergenic
TGATTTCCAAATTTAACTTC+TGG 0.372019 1.1:-63583185 None:intergenic
AACGCGTCATTCCAAAATTC+CGG 0.377639 1.1:-63583535 None:intergenic
ACCCTTCCCTGACAACATAA+TGG 0.401390 1.1:+63583091 MS.gene005420:CDS
TCTTCTTCTTCTTTACTAAA+CGG 0.425038 1.1:-63582753 None:intergenic
CTGGAAGAAGGCAATTGCTT+TGG 0.426159 1.1:+63583711 MS.gene005420:CDS
AAGGCATCATTAAAATCATA+TGG 0.427844 1.1:-63583604 None:intergenic
CTAAGTTTGGTGAGTTCAGA+TGG 0.440163 1.1:+63582796 MS.gene005420:CDS
CCCTGACAACATAATGGAAC+TGG 0.441688 1.1:+63583097 MS.gene005420:CDS
GAAGAAGGCAATTGCTTTGG+CGG 0.441719 1.1:+63583714 MS.gene005420:CDS
AAATATGTTCTTCAATAATG+TGG 0.453078 1.1:+63583253 MS.gene005420:CDS
GGAAGAAGGGAAGAAGCCTT+TGG 0.456662 1.1:+63583441 MS.gene005420:CDS
TTCATCGATTTCAGGGAAGA+AGG 0.458892 1.1:+63583427 MS.gene005420:intron
GGTTGAAGAAAGGAACATTA+TGG 0.458991 1.1:+63582577 MS.gene005420:CDS
AGATGTCAGAGATAAATAAC+TGG 0.463955 1.1:+63583692 MS.gene005420:CDS
AAGTATTATACCATCTAAAA+CGG 0.481616 1.1:-63582707 None:intergenic
AACATAATGGAACTGGTTGA+TGG 0.486232 1.1:+63583104 MS.gene005420:CDS
TCCATTATGTTGTCAGGGAA+GGG 0.491147 1.1:-63583092 None:intergenic
TTCCATTATGTTGTCAGGGA+AGG 0.494749 1.1:-63583093 None:intergenic
GGAAGGTGTTGATGAAAGTC+AGG 0.502885 1.1:+63583735 MS.gene005420:CDS
GCATGACGACATAATGAATC+CGG 0.506299 1.1:+63583516 MS.gene005420:CDS
GTCTCCATAAGTGGTGGGAG+TGG 0.508488 1.1:-63583661 None:intergenic
GATGGTTTGAAGAGTAGTAA+TGG 0.516640 1.1:+63583122 MS.gene005420:CDS
AAGGCAATTGCTTTGGCGGA+AGG 0.520845 1.1:+63583718 MS.gene005420:CDS
GATTCATTATGTCGTCATGC+AGG 0.522460 1.1:-63583513 None:intergenic
TAACATCATGACTTCATCGT+TGG 0.529999 1.1:+63582542 None:intergenic
ACTAATAAAAGGTTGAAGAA+AGG 0.530614 1.1:+63582567 MS.gene005420:CDS
AACATTATGGTCAGAAGAAG+AGG 0.530793 1.1:+63582590 MS.gene005420:CDS
AATATGTTCTTCAATAATGT+GGG 0.531232 1.1:+63583254 MS.gene005420:CDS
AGAGATAAATAACTGGAAGA+AGG 0.539212 1.1:+63583699 MS.gene005420:CDS
GCTTCAACATCGTTCTCCAA+AGG 0.546850 1.1:-63583487 None:intergenic
CCAGTTCCATTATGTTGTCA+GGG 0.557866 1.1:-63583097 None:intergenic
TCCATAAGTGGTGGGAGTGG+AGG 0.571326 1.1:-63583658 None:intergenic
TCATCGATTTCAGGGAAGAA+GGG 0.571612 1.1:+63583428 MS.gene005420:intron
TGGTAGAATTAATGCCATGC+AGG 0.585945 1.1:-63584364 None:intergenic
TGAGTTCAGATGGTCTAAGA+TGG 0.590717 1.1:+63582806 MS.gene005420:CDS
GTTCAGCACATTAGTCAATG+AGG 0.605495 1.1:+63583555 MS.gene005420:CDS
ATGGTCTAAGATGGCTCTCG+AGG 0.607145 1.1:+63582815 MS.gene005420:CDS
GAAGGAGTTGTCAAAGAACA+CGG 0.634107 1.1:+63582659 MS.gene005420:CDS
TGATGTTGAGTCTCCATAAG+TGG 0.641325 1.1:-63583670 None:intergenic
AAAAGAAAACATGAAAGACA+TGG 0.669709 1.1:+63583062 MS.gene005420:CDS
TGTTGAGTCTCCATAAGTGG+TGG 0.670357 1.1:-63583667 None:intergenic
GTTGAGTCTCCATAAGTGGT+GGG 0.670911 1.1:-63583666 None:intergenic
GATGCCATTAGACACCTGCA+TGG 0.692621 1.1:+63584350 MS.gene005420:intron
AAGGAGTTGTCAAAGAACAC+GGG 0.705685 1.1:+63582660 MS.gene005420:CDS
AACACGGGACTTGCACACTG+TGG 0.714946 1.1:+63582675 MS.gene005420:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATTTAGCATAAATTAAA+AGG + chr1.1:63583923-63583942 MS.gene005420:intron 10.0%
!!! GAATAAAAATAAAAATTTTG+GGG - chr1.1:63583829-63583848 None:intergenic 10.0%
!!! TTTATTTTTATTCAATCATT+AGG + chr1.1:63583836-63583855 MS.gene005420:intron 10.0%
!! GTAGCTAAAAAAATATTATT+GGG - chr1.1:63583883-63583902 None:intergenic 15.0%
!! TAGCTAAAAAAATATTATTG+GGG - chr1.1:63583882-63583901 None:intergenic 15.0%
!! TTTAGAAATGAATTTATTTG+AGG - chr1.1:63583905-63583924 None:intergenic 15.0%
!!! CAAATACATATAATTTGTTT+AGG - chr1.1:63584239-63584258 None:intergenic 15.0%
!!! CTGATATTAATAAGAATTTT+CGG + chr1.1:63583373-63583392 MS.gene005420:intron 15.0%
!! AAATATGTTCTTCAATAATG+TGG + chr1.1:63583253-63583272 MS.gene005420:CDS 20.0%
!! AAGTATTATACCATCTAAAA+CGG - chr1.1:63582710-63582729 None:intergenic 20.0%
!! AATATGTTCTTCAATAATGT+GGG + chr1.1:63583254-63583273 MS.gene005420:CDS 20.0%
!! AATCATTAGGTATATTAGTA+TGG + chr1.1:63583849-63583868 MS.gene005420:intron 20.0%
!! ATATTTGAAAACTGCTTATT+TGG - chr1.1:63583239-63583258 None:intergenic 20.0%
!! ATTAAAATTAATGACACAAG+TGG - chr1.1:63582970-63582989 None:intergenic 20.0%
!! GGTAGCTAAAAAAATATTAT+TGG - chr1.1:63583884-63583903 None:intergenic 20.0%
!! TAGATGTATATAAAAGAGAA+TGG - chr1.1:63583344-63583363 None:intergenic 20.0%
!! TATTTGAAAACTGCTTATTT+GGG - chr1.1:63583238-63583257 None:intergenic 20.0%
!! TGTTTAATCTCTATAAAACT+AGG - chr1.1:63584162-63584181 None:intergenic 20.0%
!!! TTTGAGTTATTTTCTAAGTT+TGG + chr1.1:63582783-63582802 MS.gene005420:CDS 20.0%
!!! TTTGTCTTATTTTGACATTT+CGG + chr1.1:63583977-63583996 MS.gene005420:intron 20.0%
! AAAAACATGGAACCAAAAAT+TGG + chr1.1:63582637-63582656 MS.gene005420:CDS 25.0%
! AAAAGAAAACATGAAAGACA+TGG + chr1.1:63583062-63583081 MS.gene005420:CDS 25.0%
! AAAGCATATGTTGAAAAACA+TGG + chr1.1:63582624-63582643 MS.gene005420:CDS 25.0%
! AAAGTTCTTGATGTCATTAT+CGG - chr1.1:63583030-63583049 None:intergenic 25.0%
! ACTAATAAAAGGTTGAAGAA+AGG + chr1.1:63582567-63582586 MS.gene005420:CDS 25.0%
! TCTTCTTCTTCTTTACTAAA+CGG - chr1.1:63582756-63582775 None:intergenic 25.0%
!! AAGGCATCATTAAAATCATA+TGG - chr1.1:63583607-63583626 None:intergenic 25.0%
!! ATAATGACATCAAGAACTTT+TGG + chr1.1:63583030-63583049 MS.gene005420:CDS 25.0%
!! GTAGTAATGGAAAAAGAATA+AGG + chr1.1:63583135-63583154 MS.gene005420:CDS 25.0%
!! TGATTTCCAAATTTAACTTC+TGG - chr1.1:63583188-63583207 None:intergenic 25.0%
!!! AATTACTTTCATCGATTTCA+GGG + chr1.1:63583420-63583439 MS.gene005420:intron 25.0%
AACATGTGATCGAATGAATA+TGG - chr1.1:63582905-63582924 None:intergenic 30.0%
AGAGATAAATAACTGGAAGA+AGG + chr1.1:63583699-63583718 MS.gene005420:CDS 30.0%
AGATGTCAGAGATAAATAAC+TGG + chr1.1:63583692-63583711 MS.gene005420:CDS 30.0%
CAGATACCAGAAGTTAAATT+TGG + chr1.1:63583179-63583198 MS.gene005420:CDS 30.0%
CTACTTCAACTTTGATTGAT+AGG + chr1.1:63583300-63583319 MS.gene005420:CDS 30.0%
TAGTCAAACATAATAGACGA+TGG + chr1.1:63584049-63584068 MS.gene005420:intron 30.0%
TTACGACCTGATGTAAAAAA+GGG + chr1.1:63582729-63582748 MS.gene005420:CDS 30.0%
TTTACGACCTGATGTAAAAA+AGG + chr1.1:63582728-63582747 MS.gene005420:CDS 30.0%
! ACATAATGAATCCGGAATTT+TGG + chr1.1:63583524-63583543 MS.gene005420:CDS 30.0%
! CATCGTTGGTTACTAATAAA+AGG + chr1.1:63582556-63582575 MS.gene005420:CDS 30.0%
!! CAATTACTTTCATCGATTTC+AGG + chr1.1:63583419-63583438 MS.gene005420:intron 30.0%
!!! AGCTAGAGAATTTTTTACGA+TGG - chr1.1:63584265-63584284 None:intergenic 30.0%
!!! CTAGAGAATTTTTTACGATG+GGG - chr1.1:63584263-63584282 None:intergenic 30.0%
!!! GCTAGAGAATTTTTTACGAT+GGG - chr1.1:63584264-63584283 None:intergenic 30.0%
AACATTATGGTCAGAAGAAG+AGG + chr1.1:63582590-63582609 MS.gene005420:CDS 35.0%
ACATGGAACCAAAAATTGGA+AGG + chr1.1:63582641-63582660 MS.gene005420:CDS 35.0%
ATTGTGTCAAACGAAAGATC+TGG - chr1.1:63584330-63584349 None:intergenic 35.0%
GATGGTTTGAAGAGTAGTAA+TGG + chr1.1:63583122-63583141 MS.gene005420:CDS 35.0%
GGTTGAAGAAAGGAACATTA+TGG + chr1.1:63582577-63582596 MS.gene005420:CDS 35.0%
TTGATGAAAGTCAGGTCATT+TGG + chr1.1:63583743-63583762 MS.gene005420:intron 35.0%
! AACATAATGGAACTGGTTGA+TGG + chr1.1:63583104-63583123 MS.gene005420:CDS 35.0%
! CTTTGGAGAACGATGAAAAA+GGG + chr1.1:63583458-63583477 MS.gene005420:CDS 35.0%
! TGACAACTCCTTCCAATTTT+TGG - chr1.1:63582652-63582671 None:intergenic 35.0%
! TTCTTTTTGTTACAGATGCC+TGG + chr1.1:63582999-63583018 MS.gene005420:intron 35.0%
AACGCGTCATTCCAAAATTC+CGG - chr1.1:63583538-63583557 None:intergenic 40.0%
AAGGAGTTGTCAAAGAACAC+GGG + chr1.1:63582660-63582679 MS.gene005420:CDS 40.0%
AATATGGCTGCAGTTGTAGA+AGG - chr1.1:63582889-63582908 None:intergenic 40.0%
ACCAGTTCCATTATGTTGTC+AGG - chr1.1:63583101-63583120 None:intergenic 40.0%
CATTGTCATGCAAGTGTCTA+AGG - chr1.1:63583626-63583645 None:intergenic 40.0%
CCAAATATCCGTATAAGCAG+CGG - chr1.1:63584291-63584310 None:intergenic 40.0%
CCAGTTCCATTATGTTGTCA+GGG - chr1.1:63583100-63583119 None:intergenic 40.0%
GAAGGAGTTGTCAAAGAACA+CGG + chr1.1:63582659-63582678 MS.gene005420:CDS 40.0%
GATTCATTATGTCGTCATGC+AGG - chr1.1:63583516-63583535 None:intergenic 40.0%
GCATGACGACATAATGAATC+CGG + chr1.1:63583516-63583535 MS.gene005420:CDS 40.0%
GTTCAGCACATTAGTCAATG+AGG + chr1.1:63583555-63583574 MS.gene005420:CDS 40.0%
TCCATTATGTTGTCAGGGAA+GGG - chr1.1:63583095-63583114 None:intergenic 40.0%
TGAAAAAGGGAAGAAGCCTT+TGG + chr1.1:63583471-63583490 MS.gene005420:CDS 40.0%
TGAGTTCAGATGGTCTAAGA+TGG + chr1.1:63582806-63582825 MS.gene005420:CDS 40.0%
TGATGTTGAGTCTCCATAAG+TGG - chr1.1:63583673-63583692 None:intergenic 40.0%
TTCCATTATGTTGTCAGGGA+AGG - chr1.1:63583096-63583115 None:intergenic 40.0%
! CCTTTGGAGAACGATGAAAA+AGG + chr1.1:63583457-63583476 MS.gene005420:CDS 40.0%
! CTAAGTTTGGTGAGTTCAGA+TGG + chr1.1:63582796-63582815 MS.gene005420:CDS 40.0%
!! AAGTCAGGTCATTTGGTTTG+AGG + chr1.1:63583750-63583769 MS.gene005420:intron 40.0%
!! ATGTCATTATCGGTTCTTCC+AGG - chr1.1:63583020-63583039 None:intergenic 40.0%
!! CCTTTTTCATCGTTCTCCAA+AGG - chr1.1:63583460-63583479 None:intergenic 40.0%
!! TCATCGATTTCAGGGAAGAA+GGG + chr1.1:63583428-63583447 MS.gene005420:intron 40.0%
!! TTCATCGATTTCAGGGAAGA+AGG + chr1.1:63583427-63583446 MS.gene005420:intron 40.0%
!!! AACGGACCCTTTTTTACATC+AGG - chr1.1:63582738-63582757 None:intergenic 40.0%
!!! GAAGAAGTTGCCGTTTTAGA+TGG + chr1.1:63582697-63582716 MS.gene005420:CDS 40.0%
AAGCTACCCCATCCTTTCAA+AGG - chr1.1:63583800-63583819 None:intergenic 45.0%
AATGCCATGCAGGTGTCTAA+TGG - chr1.1:63584357-63584376 None:intergenic 45.0%
ACCCTTCCCTGACAACATAA+TGG + chr1.1:63583091-63583110 MS.gene005420:CDS 45.0%
AGCTACCCCATCCTTTCAAA+GGG - chr1.1:63583799-63583818 None:intergenic 45.0%
CCGCTGCTTATACGGATATT+TGG + chr1.1:63584288-63584307 MS.gene005420:intron 45.0%
CTGGAAGAAGGCAATTGCTT+TGG + chr1.1:63583711-63583730 MS.gene005420:CDS 45.0%
GAAGAAGGCAATTGCTTTGG+CGG + chr1.1:63583714-63583733 MS.gene005420:CDS 45.0%
GCTTCAACATCGTTCTCCAA+AGG - chr1.1:63583490-63583509 None:intergenic 45.0%
GTTGAGTCTCCATAAGTGGT+GGG - chr1.1:63583669-63583688 None:intergenic 45.0%
TGTTGAGTCTCCATAAGTGG+TGG - chr1.1:63583670-63583689 None:intergenic 45.0%
TTGAAAGGATGGGGTAGCTT+TGG + chr1.1:63583800-63583819 MS.gene005420:intron 45.0%
TTGAGGAACCCTTATACGCA+GGG + chr1.1:63583767-63583786 MS.gene005420:intron 45.0%
TTTGAGGAACCCTTATACGC+AGG + chr1.1:63583766-63583785 MS.gene005420:intron 45.0%
! CCCTGACAACATAATGGAAC+TGG + chr1.1:63583097-63583116 MS.gene005420:CDS 45.0%
! CGAATCCCTTTGAAAGGATG+GGG + chr1.1:63583791-63583810 MS.gene005420:intron 45.0%
! GCGAATCCCTTTGAAAGGAT+GGG + chr1.1:63583790-63583809 MS.gene005420:intron 45.0%
!! GGAAGGTGTTGATGAAAGTC+AGG + chr1.1:63583735-63583754 MS.gene005420:CDS 45.0%
!!! TGAATAAAAATAAAAATTTT+GGG - chr1.1:63583830-63583849 None:intergenic 5.0%
!!! TTGAATAAAAATAAAAATTT+TGG - chr1.1:63583831-63583850 None:intergenic 5.0%
AAGGCAATTGCTTTGGCGGA+AGG + chr1.1:63583718-63583737 MS.gene005420:CDS 50.0%
GATGCCATTAGACACCTGCA+TGG + chr1.1:63584350-63584369 MS.gene005420:intron 50.0%
GGAAGAAGGGAAGAAGCCTT+TGG + chr1.1:63583441-63583460 MS.gene005420:CDS 50.0%
TAGCTTCGCCGCTGCTTATA+CGG + chr1.1:63584280-63584299 MS.gene005420:intron 50.0%
TGAGGAACCCTTATACGCAG+GGG + chr1.1:63583768-63583787 MS.gene005420:intron 50.0%
! ATGGTCTAAGATGGCTCTCG+AGG + chr1.1:63582815-63582834 MS.gene005420:CDS 50.0%
! GGCGAATCCCTTTGAAAGGA+TGG + chr1.1:63583789-63583808 MS.gene005420:intron 50.0%
AACACGGGACTTGCACACTG+TGG + chr1.1:63582675-63582694 MS.gene005420:CDS 55.0%
CAGGGGCGAATCCCTTTGAA+AGG + chr1.1:63583785-63583804 MS.gene005420:intron 55.0%
GGATTCGCCCCTGCGTATAA+GGG - chr1.1:63583778-63583797 None:intergenic 55.0%
! GTCTCCATAAGTGGTGGGAG+TGG - chr1.1:63583664-63583683 None:intergenic 55.0%
! TCCATAAGTGGTGGGAGTGG+AGG - chr1.1:63583661-63583680 None:intergenic 55.0%
GCCTCCACTCCCACCACTTA+TGG + chr1.1:63583657-63583676 MS.gene005420:CDS 60.0%
GGGATTCGCCCCTGCGTATA+AGG - chr1.1:63583779-63583798 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr1.1 gene 63582549 63584378 63582549 ID=MS.gene005420
chr1.1 mRNA 63582549 63584378 63582549 ID=MS.gene005420.t1;Parent=MS.gene005420
chr1.1 exon 63582549 63582836 63582549 ID=MS.gene005420.t1.exon1;Parent=MS.gene005420.t1
chr1.1 CDS 63582549 63582836 63582549 ID=cds.MS.gene005420.t1;Parent=MS.gene005420.t1
chr1.1 exon 63583014 63583321 63583014 ID=MS.gene005420.t1.exon2;Parent=MS.gene005420.t1
chr1.1 CDS 63583014 63583321 63583014 ID=cds.MS.gene005420.t1;Parent=MS.gene005420.t1
chr1.1 exon 63583441 63583756 63583441 ID=MS.gene005420.t1.exon3;Parent=MS.gene005420.t1
chr1.1 CDS 63583441 63583756 63583441 ID=cds.MS.gene005420.t1;Parent=MS.gene005420.t1
chr1.1 exon 63584361 63584378 63584361 ID=MS.gene005420.t1.exon4;Parent=MS.gene005420.t1
chr1.1 CDS 63584361 63584378 63584361 ID=cds.MS.gene005420.t1;Parent=MS.gene005420.t1
Gene Sequence

>MS.gene005420

ATGACTTCATCGTTGGTTACTAATAAAAGGTTGAAGAAAGGAACATTATGGTCAGAAGAAGAGGATGAAATATTAAAAGCATATGTTGAAAAACATGGAACCAAAAATTGGAAGGAGTTGTCAAAGAACACGGGACTTGCACACTGTGGAAGAAGTTGCCGTTTTAGATGGTATAATACTTTACGACCTGATGTAAAAAAGGGTCCGTTTAGTAAAGAAGAAGAAGAAAAATTCTTTGAGTTATTTTCTAAGTTTGGTGAGTTCAGATGGTCTAAGATGGCTCTCGAGGTATATTTTTGTTCATGCTTTACTTCTTTTATTTAAAATATTTATCTGTCCTTCTACAACTGCAGCCATATTCATTCGATCACATGTTGTGCAATTTAATTAAATACAATACTATAATATAATATATTTACCACTTGTGTCATTAATTTTAATTTGTATTCATTCTTTTTGTTACAGATGCCTGGAAGAACCGATAATGACATCAAGAACTTTTGGAATGCAAGAAAAAGAAAACATGAAAGACATGGCTTGTCACCCTTCCCTGACAACATAATGGAACTGGTTGATGGTTTGAAGAGTAGTAATGGAAAAAGAATAAGGAATTCACAAGAAAACAAATTTCAGATACCAGAAGTTAAATTTGGAAATCAAATTCTGCATACAAACTTGTCTGATCTCCCAAATAAGCAGTTTTCAAATATGTTCTTCAATAATGTGGGAAGTACTTCTACAAGCAATCATACTACTTCAACTTTGATTGATAGGTGAGTAGATTATGCAATGCCATTCTCTTTTATATACATCTATTTGTTACGCTGATATTAATAAGAATTTTCGGTAAAAATTTATATGTTAAATTTACAATTACTTTCATCGATTTCAGGGAAGAAGGGAAGAAGCCTTTGGAGAACGATGAAAAAGGGAAGAAGCCTTTGGAGAACGATGTTGAAGCAAACCTGCATGACGACATAATGAATCCGGAATTTTGGAATGACGCGTTCAGCACATTAGTCAATGAGGTTTACAATGACTTGCATGACAAGCTTCCATATGATTTTAATGATGCCTTAGACACTTGCATGACAATGCAATCAGATCTGCCTCCACTCCCACCACTTATGGAGACTCAACATCAGATGTCAGAGATAAATAACTGGAAGAAGGCAATTGCTTTGGCGGAAGGTGTTGATGAAAGTCAGGTCATTTGGTTTGAGGAACCCTTATACGCAGGGGCGAATCCCTTTGAAAGGATGGGGTAGCTTTGGCTACCCCAAAATTTTTATTTTTATTCAATCATTAGGTATATTAGTATGGTGAGCTACCCCAATAATATTTTTTTAGCTACCTCAAATAAATTCATTTCTAAAAATTTAGCATAAATTAAAAGGTTAAAAAATTATTACTTGATTAATAAACTTATTTGTCTTATTTTGACATTTCGGTCTATACAACAACTATAGTGAAAATATTTTTAGCAATAAAAATTATCAATAGTCAAACATAATAGACGATGGTTTAATGCAAATAACTTATTTGTCTACGTTGAAAAAGAATATTTTTTTTAACGATACGTTGAACAAGAAATATTTGACTTCTCGAAGCCTAGTTTTATAGAGATTAAACATATTTAACATTTAAATTTAATATATAATATTTTAAAATATATAAGTTTTTTTTGCCTAAACAAATTATATGTATTTGTCCCCATCGTAAAAAATTCTCTAGCTTCGCCGCTGCTTATACGGATATTTGGTTTGACTATGAGTTATCCAGATCTTTCGTTTGACACAATGATGCCATTAGACACCTGCATGGCATTAA
Protein sequence

>MS.gene005420.t1

MTSSLVTNKRLKKGTLWSEEEDEILKAYVEKHGTKNWKELSKNTGLAHCGRSCRFRWYNTLRPDVKKGPFSKEEEEKFFELFSKFGEFRWSKMALEMPGRTDNDIKNFWNARKRKHERHGLSPFPDNIMELVDGLKSSNGKRIRNSQENKFQIPEVKFGNQILHTNLSDLPNKQFSNMFFNNVGSTSTSNHTTSTLIDREEGKKPLENDEKGKKPLENDVEANLHDDIMNPEFWNDAFSTLVNEVYNDLHDKLPYDFNDALDTCMTMQSDLPPLPPLMETQHQMSEINNWKKAIALAEGVDESQTPAWH