AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene005488

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene005488.t1 MTR_1g086510 89.963 269 12 4 1 258 1 265 6.88e-161 447
MS.gene005488.t1 MTR_1g086530 54.688 256 90 7 15 249 26 276 5.06e-85 255
MS.gene005488.t1 MTR_1g110460 54.497 189 74 2 6 184 12 198 4.42e-66 208
MS.gene005488.t1 MTR_2g033170 71.942 139 29 1 17 145 19 157 4.09e-64 203
MS.gene005488.t1 MTR_4g123040 45.051 293 100 5 14 245 16 308 1.21e-63 202
MS.gene005488.t1 MTR_7g035075 64.167 120 33 1 9 118 1 120 1.22e-51 167
MS.gene005488.t1 MTR_6g006030 69.444 108 23 1 22 119 14 121 3.93e-51 166
MS.gene005488.t1 MTR_1g045610 59.836 122 38 2 6 117 6 126 4.71e-45 152
MS.gene005488.t1 MTR_1g073170 63.810 105 28 1 23 117 21 125 1.67e-43 148
MS.gene005488.t1 MTR_5g029840 45.763 177 75 4 12 169 2 176 4.87e-41 144
MS.gene005488.t1 MTR_8g027345 57.983 119 38 2 19 125 9 127 3.57e-40 140
MS.gene005488.t1 MTR_4g125520 60.345 116 33 2 15 120 8 120 1.02e-39 140
MS.gene005488.t1 MTR_5g007370 54.622 119 44 1 14 122 4 122 1.50e-39 139
MS.gene005488.t1 MTR_3g074520 51.429 140 57 2 12 141 2 140 8.72e-39 138
MS.gene005488.t1 MTR_4g478180 53.719 121 46 1 12 122 3 123 1.62e-38 137
MS.gene005488.t1 MTR_4g063100 57.407 108 36 1 23 120 8 115 2.30e-38 135
MS.gene005488.t1 MTR_5g078140 53.043 115 44 1 18 122 8 122 1.74e-37 134
MS.gene005488.t1 MTR_7g117730 58.182 110 36 1 18 117 8 117 1.78e-37 132
MS.gene005488.t1 MTR_3g065440 53.043 115 44 1 18 122 8 122 2.38e-37 134
MS.gene005488.t1 MTR_1g043080 58.095 105 34 1 21 115 11 115 4.69e-37 131
MS.gene005488.t1 MTR_2g096380 55.046 109 39 1 22 120 6 114 4.83e-37 130
MS.gene005488.t1 MTR_4g121460 63.725 102 27 1 21 112 11 112 5.00e-37 133
MS.gene005488.t1 MTR_3g052450 52.252 111 43 1 18 118 36 146 5.36e-37 137
MS.gene005488.t1 MTR_2g011660 54.310 116 43 1 17 122 8 123 6.21e-37 133
MS.gene005488.t1 MTR_1g076150 53.390 118 45 1 21 128 11 128 7.18e-37 131
MS.gene005488.t1 MTR_4g102380 53.913 115 43 1 18 122 8 122 7.34e-37 131
MS.gene005488.t1 MTR_7g076740 51.240 121 48 1 18 127 8 128 1.19e-36 132
MS.gene005488.t1 MTR_2g089620 55.556 108 38 1 18 115 8 115 1.41e-36 132
MS.gene005488.t1 MTR_3g052430 54.206 107 39 1 22 118 41 147 1.57e-36 135
MS.gene005488.t1 MTR_4g091490 53.448 116 44 1 17 122 8 123 1.57e-36 132
MS.gene005488.t1 MTR_3g011610 56.604 106 36 1 22 117 37 142 2.21e-36 135
MS.gene005488.t1 MTR_2g034790 38.428 229 99 7 19 217 9 225 2.22e-36 132
MS.gene005488.t1 MTR_1g100653 55.556 108 38 1 21 118 11 118 5.30e-36 130
MS.gene005488.t1 MTR_7g011170 52.893 121 47 1 12 122 2 122 5.60e-36 130
MS.gene005488.t1 MTR_7g096930 55.556 108 38 1 21 118 11 118 7.30e-36 129
MS.gene005488.t1 MTR_1g043050 57.143 105 35 1 21 115 11 115 8.02e-36 128
MS.gene005488.t1 MTR_6g012690 50.758 132 54 2 12 132 2 133 8.07e-36 130
MS.gene005488.t1 MTR_0251s0050 47.761 134 51 2 17 131 8 141 9.60e-36 128
MS.gene005488.t1 MTR_2g089420 43.750 176 71 4 21 168 10 185 1.76e-35 131
MS.gene005488.t1 MTR_0008s0390 53.636 110 41 1 17 116 8 117 1.89e-35 127
MS.gene005488.t1 MTR_3g097450 59.804 102 31 1 24 115 14 115 2.92e-35 128
MS.gene005488.t1 MTR_1g062940 57.547 106 35 1 22 117 6 111 3.14e-35 125
MS.gene005488.t1 MTR_8g031360 44.521 146 55 2 17 151 8 138 3.49e-35 127
MS.gene005488.t1 MTR_8g098860 54.054 111 41 1 18 118 8 118 3.59e-35 128
MS.gene005488.t1 MTR_0008s0470 55.140 107 38 1 20 116 11 117 7.58e-35 127
MS.gene005488.t1 MTR_7g115650 51.852 108 42 1 21 118 11 118 9.22e-35 124
MS.gene005488.t1 MTR_1g085040 53.448 116 44 1 22 127 12 127 1.22e-34 128
MS.gene005488.t1 MTR_3g083540 57.009 107 36 1 19 115 38 144 1.54e-34 126
MS.gene005488.t1 MTR_1g112760 34.742 213 126 3 22 224 13 222 2.22e-34 124
MS.gene005488.t1 MTR_7g010210 45.638 149 61 3 21 149 11 159 2.30e-34 126
MS.gene005488.t1 MTR_2g089450 54.206 107 39 1 18 114 8 114 2.41e-34 124
MS.gene005488.t1 MTR_4g100720 52.066 121 45 2 10 120 4 121 2.47e-34 122
MS.gene005488.t1 MTR_8g017440 50.877 114 46 1 12 115 2 115 2.87e-34 126
MS.gene005488.t1 MTR_8g042410 52.830 106 40 1 22 117 37 142 3.00e-34 129
MS.gene005488.t1 MTR_7g010210 44.737 152 64 3 18 149 8 159 4.22e-34 124
MS.gene005488.t1 MTR_5g010020 54.128 109 40 1 12 110 2 110 4.71e-34 125
MS.gene005488.t1 MTR_5g079670 46.923 130 56 2 9 128 1 127 4.72e-34 122
MS.gene005488.t1 MTR_2g064160 51.923 104 40 1 22 115 11 114 5.32e-34 125
MS.gene005488.t1 MTR_4g082290 49.206 126 54 1 12 127 2 127 6.32e-34 127
MS.gene005488.t1 MTR_1g100667 52.137 117 46 1 23 129 14 130 8.14e-34 123
MS.gene005488.t1 MTR_4g073420 58.824 102 32 1 24 115 14 115 1.02e-33 123
MS.gene005488.t1 MTR_2g099740 49.123 114 48 1 12 115 2 115 1.12e-33 126
MS.gene005488.t1 MTR_2g097910 53.704 108 40 1 22 119 20 127 2.21e-33 123
MS.gene005488.t1 MTR_4g485530 52.679 112 43 1 24 125 14 125 2.45e-33 120
MS.gene005488.t1 MTR_4g063100 68.421 76 24 0 45 120 11 86 4.00e-33 120
MS.gene005488.t1 MTR_1g017000 49.524 105 42 1 22 115 12 116 4.62e-33 121
MS.gene005488.t1 MTR_8g017540 49.123 114 48 1 12 115 48 161 5.13e-33 124
MS.gene005488.t1 MTR_3g039990 52.294 109 42 1 21 119 12 120 6.03e-33 122
MS.gene005488.t1 MTR_8g095390 52.632 114 44 1 24 127 14 127 6.08e-33 122
MS.gene005488.t1 MTR_8g020490 53.271 107 40 1 22 118 8 114 6.46e-33 120
MS.gene005488.t1 MTR_3g077110 54.808 104 37 1 22 115 12 115 7.33e-33 122
MS.gene005488.t1 MTR_6g012180 57.000 100 33 1 21 110 11 110 9.81e-33 122
MS.gene005488.t1 MTR_8g017390 48.696 115 48 1 12 115 2 116 1.46e-32 124
MS.gene005488.t1 MTR_3g028740 49.606 127 52 2 1 117 3 127 1.48e-32 122
MS.gene005488.t1 MTR_7g110830 51.240 121 48 2 22 131 12 132 1.60e-32 122
MS.gene005488.t1 MTR_8g017500 45.968 124 57 1 18 131 8 131 1.66e-32 122
MS.gene005488.t1 MTR_1g021230 52.830 106 40 1 22 117 57 162 1.70e-32 123
MS.gene005488.t1 MTR_0063s0090 36.410 195 99 5 18 196 8 193 1.83e-32 119
MS.gene005488.t1 MTR_0008s0280 50.000 110 45 1 18 117 8 117 1.84e-32 119
MS.gene005488.t1 MTR_4g082230 50.862 116 47 1 22 127 12 127 2.12e-32 122
MS.gene005488.t1 MTR_7g087130 45.802 131 52 2 19 130 9 139 2.35e-32 121
MS.gene005488.t1 MTR_7g111290 54.310 116 43 1 22 127 12 127 2.58e-32 122
MS.gene005488.t1 MTR_0140s0030 53.333 105 39 1 21 115 12 116 3.11e-32 120
MS.gene005488.t1 MTR_0489s0020 53.333 105 39 1 21 115 12 116 3.11e-32 120
MS.gene005488.t1 MTR_4g065017 46.617 133 56 2 1 123 1 128 3.47e-32 120
MS.gene005488.t1 MTR_4g057635 39.884 173 77 4 18 166 8 177 3.79e-32 120
MS.gene005488.t1 MTR_6g055910 44.737 152 58 4 14 155 6 141 7.40e-32 119
MS.gene005488.t1 MTR_1g085640 50.413 121 49 2 22 131 12 132 1.26e-31 120
MS.gene005488.t1 MTR_8g017340 49.524 105 42 1 22 115 12 116 2.66e-31 120
MS.gene005488.t1 MTR_8g017350 49.524 105 42 1 22 115 12 116 2.78e-31 122
MS.gene005488.t1 MTR_4g105130 41.935 155 73 4 22 163 12 162 2.99e-31 119
MS.gene005488.t1 MTR_2g067420 48.649 111 47 1 11 111 3 113 3.81e-31 117
MS.gene005488.t1 MTR_2g088170 49.074 108 45 1 20 117 27 134 6.32e-31 119
MS.gene005488.t1 MTR_2g096380 62.195 82 31 0 39 120 14 95 7.83e-31 114
MS.gene005488.t1 MTR_5g042030 49.107 112 47 1 21 122 6 117 1.28e-30 115
MS.gene005488.t1 MTR_2g095520 50.000 110 44 1 12 110 2 111 1.33e-30 116
MS.gene005488.t1 MTR_3g461490 45.600 125 57 2 22 135 12 136 1.62e-30 116
MS.gene005488.t1 MTR_7g109320 51.786 112 44 1 19 120 9 120 2.00e-30 116
MS.gene005488.t1 MTR_1g017140 49.541 109 44 1 18 115 8 116 1.20e-29 114
MS.gene005488.t1 MTR_3g103570 49.541 109 44 1 18 115 8 116 2.18e-29 113
MS.gene005488.t1 MTR_1g083630 50.943 106 42 1 22 117 12 117 2.28e-29 116
MS.gene005488.t1 MTR_6g009430 45.217 115 53 1 18 122 8 122 2.99e-29 113
MS.gene005488.t1 MTR_5g014990 48.624 109 45 1 18 115 8 116 3.52e-29 112
MS.gene005488.t1 MTR_5g079120 41.212 165 82 4 17 166 56 220 3.77e-29 112
MS.gene005488.t1 MTR_6g090405 46.087 115 51 1 12 115 2 116 1.80e-28 109
MS.gene005488.t1 MTR_7g102110 43.651 126 60 1 12 126 2 127 2.05e-28 109
MS.gene005488.t1 MTR_4g128670 50.000 104 41 1 18 110 8 111 2.99e-28 110
MS.gene005488.t1 MTR_8g006470 41.379 116 57 2 15 119 3 118 3.27e-28 109
MS.gene005488.t1 MTR_7g017260 46.552 116 50 1 13 116 16 131 4.44e-28 108
MS.gene005488.t1 MTR_8g060940 51.887 106 41 1 17 112 2 107 6.64e-28 107
MS.gene005488.t1 MTR_0247s0040 52.381 105 40 1 18 112 3 107 1.04e-27 105
MS.gene005488.t1 MTR_4g097570 47.222 108 46 1 12 108 2 109 2.37e-27 107
MS.gene005488.t1 MTR_4g097570 46.789 109 46 1 12 108 2 110 3.26e-27 106
MS.gene005488.t1 MTR_5g078800 50.000 110 45 1 17 116 2 111 7.50e-27 105
MS.gene005488.t1 MTR_0197s0010 47.321 112 49 1 26 127 5 116 1.21e-26 103
MS.gene005488.t1 MTR_5g079290 47.826 115 50 1 11 115 6 120 1.94e-26 103
MS.gene005488.t1 MTR_6g055910 49.107 112 41 3 44 155 17 112 2.87e-26 103
MS.gene005488.t1 MTR_0001s0360 50.000 106 43 1 21 116 6 111 6.16e-26 102
MS.gene005488.t1 MTR_4g128190 41.667 120 66 2 14 132 3 119 1.13e-25 101
MS.gene005488.t1 MTR_7g111290 59.036 83 34 0 45 127 3 85 1.71e-25 103
MS.gene005488.t1 MTR_0193s0090 48.598 107 45 1 18 114 3 109 1.74e-25 100
MS.gene005488.t1 MTR_5g078860 49.091 110 46 1 17 116 2 111 2.06e-25 102
MS.gene005488.t1 MTR_5g078910 47.273 110 48 1 17 116 2 111 2.45e-25 102
MS.gene005488.t1 MTR_5g079220 49.524 105 43 1 21 115 20 124 2.91e-25 101
MS.gene005488.t1 MTR_5g088080 44.037 109 50 2 20 117 10 118 3.77e-25 100
MS.gene005488.t1 MTR_5g088150 44.037 109 50 2 20 117 10 118 3.77e-25 100
MS.gene005488.t1 MTR_5g488210 44.037 109 50 2 20 117 10 118 3.77e-25 100
MS.gene005488.t1 MTR_5g088640 44.037 109 50 2 20 117 10 118 4.11e-25 100
MS.gene005488.t1 MTR_5g488170 44.037 109 50 2 20 117 10 118 6.26e-25 99.8
MS.gene005488.t1 MTR_5g078950 47.170 106 46 1 17 112 2 107 1.89e-24 99.0
MS.gene005488.t1 MTR_4g029540 41.667 108 51 3 16 111 3 110 2.66e-24 99.0
MS.gene005488.t1 MTR_5g062790 45.000 100 44 2 23 111 10 109 2.80e-24 99.0
MS.gene005488.t1 MTR_5g078930 44.444 126 56 2 17 128 4 129 5.82e-23 93.6
MS.gene005488.t1 MTR_5g088610 44.340 106 48 2 23 117 10 115 6.33e-23 96.3
MS.gene005488.t1 MTR_3g045430 38.168 131 70 2 13 132 4 134 6.70e-23 95.1
MS.gene005488.t1 MTR_5g049190 39.640 111 54 2 9 108 4 112 2.05e-22 92.8
MS.gene005488.t1 MTR_3g101290 45.098 102 47 1 24 116 37 138 4.91e-22 91.3
MS.gene005488.t1 MTR_4g019370 46.939 98 43 2 24 112 38 135 3.90e-21 91.3
MS.gene005488.t1 MTR_5g016510 41.667 108 54 1 24 122 5 112 1.00e-20 89.7
MS.gene005488.t1 MTR_5g007300 51.250 80 29 1 19 88 61 140 2.20e-20 84.7
MS.gene005488.t1 MTR_5g070020 36.800 125 70 1 14 129 112 236 2.67e-20 89.0
MS.gene005488.t1 MTR_7g061330 40.777 103 52 1 22 115 111 213 2.81e-20 90.1
MS.gene005488.t1 MTR_7g461410 40.777 103 52 1 22 115 111 213 2.81e-20 90.1
MS.gene005488.t1 MTR_7g061330 40.777 103 52 1 22 115 75 177 5.00e-20 89.4
MS.gene005488.t1 MTR_6g015455 40.870 115 59 1 24 129 5 119 6.21e-20 89.4
MS.gene005488.t1 MTR_6g027360 36.719 128 71 3 9 127 64 190 8.40e-20 87.0
MS.gene005488.t1 MTR_3g110028 39.806 103 53 1 22 115 83 185 1.66e-19 88.2
MS.gene005488.t1 MTR_6g027340 35.938 128 72 3 9 127 2 128 1.66e-19 84.3
MS.gene005488.t1 MTR_1g057980 31.183 186 115 5 8 183 64 246 3.51e-19 85.1
MS.gene005488.t1 MTR_4g105660 35.461 141 80 3 19 150 175 313 3.75e-19 86.3
MS.gene005488.t1 MTR_7g450950 32.258 155 87 4 10 150 138 288 6.63e-19 85.1
MS.gene005488.t1 MTR_1g085880 41.667 120 56 4 14 121 3 120 7.75e-19 82.0
MS.gene005488.t1 MTR_7g037260 33.094 139 80 2 8 135 129 265 8.94e-19 84.7
MS.gene005488.t1 MTR_3g077650 40.566 106 54 2 24 120 181 286 9.56e-19 85.5
MS.gene005488.t1 MTR_5g041570 36.975 119 62 3 13 118 119 237 1.23e-18 85.1
MS.gene005488.t1 MTR_3g463400 39.815 108 56 2 22 120 131 238 1.74e-18 84.7
MS.gene005488.t1 MTR_6g074860 42.000 100 49 2 24 114 4 103 1.76e-18 82.0
MS.gene005488.t1 MTR_1g026870 36.893 103 56 1 22 115 83 185 2.09e-18 84.7
MS.gene005488.t1 MTR_4g094982 39.048 105 55 1 24 119 5 109 2.16e-18 82.4
MS.gene005488.t1 MTR_1g085770 41.667 120 56 4 14 121 3 120 2.83e-18 82.8
MS.gene005488.t1 MTR_5g082910 44.681 94 43 1 24 108 19 112 1.29e-17 80.5
MS.gene005488.t1 MTR_4g082040 37.288 118 61 3 14 118 91 208 1.46e-17 81.6
MS.gene005488.t1 MTR_4g088015 34.959 123 67 2 24 135 221 341 2.95e-17 80.9
MS.gene005488.t1 MTR_7g061550 35.455 110 59 1 27 124 10 119 3.80e-17 80.1
MS.gene005488.t1 MTR_4g063100 64.706 51 18 0 70 120 1 51 4.77e-17 77.0
MS.gene005488.t1 MTR_7g451170 34.677 124 68 2 8 120 175 296 5.70e-17 80.1
MS.gene005488.t1 MTR_3g089045 35.156 128 74 2 14 132 6 133 3.00e-16 77.0
MS.gene005488.t1 MTR_2g096380 62.745 51 19 0 70 120 1 51 3.90e-16 74.3
MS.gene005488.t1 MTR_6g027370 40.230 87 48 1 41 127 129 211 5.79e-16 76.6
MS.gene005488.t1 MTR_5g038910 39.000 100 52 1 27 117 29 128 6.46e-16 77.0
MS.gene005488.t1 MTR_5g038910 39.000 100 52 1 27 117 29 128 9.31e-16 76.3
MS.gene005488.t1 MTR_7g035350 30.208 192 104 5 27 207 228 400 1.31e-15 76.3
MS.gene005488.t1 MTR_7g086960 41.379 87 48 2 37 123 113 196 2.21e-15 75.1
MS.gene005488.t1 MTR_5g010650 38.542 96 50 1 22 108 108 203 2.63e-14 72.4
MS.gene005488.t1 MTR_7g037130 32.258 124 69 3 8 118 129 250 2.25e-13 69.3
MS.gene005488.t1 MTR_8g468380 35.088 114 62 2 27 131 25 135 4.23e-13 68.9
MS.gene005488.t1 MTR_6g055910 41.860 86 34 3 70 155 2 71 8.62e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene005488.t1 AT2G47190 46.377 276 100 10 5 247 3 263 2.35e-70 218
MS.gene005488.t1 AT1G48000 68.750 144 35 1 22 155 32 175 4.09e-70 216
MS.gene005488.t1 AT5G49620 65.385 156 44 1 2 147 6 161 2.75e-64 203
MS.gene005488.t1 AT3G06490 68.000 150 34 2 10 145 3 152 1.12e-62 199
MS.gene005488.t1 AT1G68320 66.418 134 35 1 22 145 19 152 2.85e-61 195
MS.gene005488.t1 AT5G49620 60.000 170 44 2 2 147 6 175 1.18e-60 194
MS.gene005488.t1 AT1G25340 47.534 223 84 6 18 213 12 228 4.49e-60 191
MS.gene005488.t1 AT1G25340 65.185 135 40 2 18 145 12 146 1.95e-59 190
MS.gene005488.t1 AT1G25340 48.165 218 85 6 18 213 12 223 4.53e-59 190
MS.gene005488.t1 AT3G27810 67.273 110 26 1 19 118 17 126 6.53e-51 166
MS.gene005488.t1 AT5G40350 51.553 161 60 4 22 166 17 175 6.91e-50 163
MS.gene005488.t1 AT3G01530 65.789 114 29 1 14 117 17 130 2.97e-49 161
MS.gene005488.t1 AT3G24310 62.385 109 31 1 19 117 15 123 3.35e-44 150
MS.gene005488.t1 AT3G30210 64.486 107 28 1 21 117 26 132 3.85e-43 148
MS.gene005488.t1 AT4G13480 62.857 105 29 1 23 117 7 111 6.14e-43 147
MS.gene005488.t1 AT3G27810 78.378 74 16 0 45 118 4 77 2.25e-40 137
MS.gene005488.t1 AT3G46130 56.034 116 41 1 19 124 6 121 2.30e-40 140
MS.gene005488.t1 AT5G65230 52.344 128 51 1 12 129 2 129 3.33e-40 141
MS.gene005488.t1 AT5G16770 41.463 205 104 4 12 203 2 203 3.67e-40 141
MS.gene005488.t1 AT5G16770 41.463 205 104 4 12 203 2 203 3.67e-40 141
MS.gene005488.t1 AT5G16770 41.463 205 104 4 12 203 2 203 5.97e-40 141
MS.gene005488.t1 AT5G16770 41.463 205 104 4 12 203 2 203 5.97e-40 141
MS.gene005488.t1 AT3G02940 55.372 121 44 1 12 122 2 122 7.87e-40 140
MS.gene005488.t1 AT3G02940 55.372 121 44 1 12 122 2 122 1.26e-39 140
MS.gene005488.t1 AT3G02940 55.372 121 44 1 12 122 2 122 1.26e-39 140
MS.gene005488.t1 AT5G59780 57.407 108 36 1 23 120 9 116 1.34e-39 137
MS.gene005488.t1 AT5G40350 52.344 128 53 3 45 166 5 130 7.56e-39 133
MS.gene005488.t1 AT3G23250 37.273 220 88 6 21 224 11 196 1.16e-38 136
MS.gene005488.t1 AT1G34670 50.714 140 58 2 12 141 2 140 1.26e-38 138
MS.gene005488.t1 AT4G05100 55.172 116 42 1 17 122 8 123 1.70e-38 137
MS.gene005488.t1 AT5G62320 51.538 130 46 1 18 130 9 138 5.41e-38 134
MS.gene005488.t1 AT1G06180 53.390 118 45 1 21 128 11 128 2.32e-37 132
MS.gene005488.t1 AT1G66230 53.043 115 44 1 18 122 8 122 2.67e-37 133
MS.gene005488.t1 AT3G01140 51.163 129 53 1 12 130 2 130 3.35e-37 134
MS.gene005488.t1 AT5G10280 52.066 121 48 1 12 122 2 122 5.48e-37 133
MS.gene005488.t1 AT4G28110 53.509 114 43 1 12 115 2 115 9.05e-37 131
MS.gene005488.t1 AT3G01140 55.652 115 41 1 18 122 51 165 1.37e-36 133
MS.gene005488.t1 AT4G21440 54.386 114 42 1 19 122 9 122 1.50e-36 132
MS.gene005488.t1 AT4G12350 40.104 192 88 5 22 203 12 186 1.74e-36 130
MS.gene005488.t1 AT5G15310 52.893 121 47 1 12 122 2 122 2.00e-36 129
MS.gene005488.t1 AT2G31180 57.143 105 35 1 21 115 11 115 2.28e-36 129
MS.gene005488.t1 AT5G14750 43.373 166 79 4 8 161 4 166 2.31e-36 128
MS.gene005488.t1 AT1G22640 52.756 127 50 1 12 128 2 128 2.34e-36 130
MS.gene005488.t1 AT5G14340 46.715 137 63 1 8 134 10 146 2.49e-36 130
MS.gene005488.t1 AT5G54230 54.955 111 40 1 22 122 12 122 3.09e-36 131
MS.gene005488.t1 AT3G13540 45.752 153 70 3 9 151 10 159 3.17e-36 129
MS.gene005488.t1 AT5G16600 51.304 115 46 1 18 122 8 122 4.02e-36 131
MS.gene005488.t1 AT5G15310 52.893 121 47 1 12 122 2 122 5.35e-36 130
MS.gene005488.t1 AT5G15310 52.893 121 47 1 12 122 2 122 5.64e-36 130
MS.gene005488.t1 AT4G22680 50.000 120 50 1 18 127 8 127 7.84e-36 129
MS.gene005488.t1 AT3G11440 47.059 119 53 1 9 117 28 146 8.30e-36 133
MS.gene005488.t1 AT5G06100 52.336 107 41 1 21 117 31 137 1.55e-35 132
MS.gene005488.t1 AT3G47600 52.991 117 43 2 18 122 8 124 2.23e-35 129
MS.gene005488.t1 AT5G40330 54.955 111 38 2 15 115 7 115 3.34e-35 125
MS.gene005488.t1 AT4G26930 49.593 123 49 2 9 118 3 125 3.42e-35 130
MS.gene005488.t1 AT3G11440 47.059 119 53 1 9 117 28 146 3.63e-35 132
MS.gene005488.t1 AT3G11440 47.059 119 53 1 9 117 28 146 3.63e-35 132
MS.gene005488.t1 AT3G11440 47.059 119 53 1 9 117 28 146 3.63e-35 132
MS.gene005488.t1 AT5G06100 52.336 107 41 1 21 117 31 137 4.68e-35 131
MS.gene005488.t1 AT5G06100 52.336 107 41 1 21 117 31 137 4.68e-35 131
MS.gene005488.t1 AT5G06100 52.336 107 41 1 21 117 31 137 4.68e-35 131
MS.gene005488.t1 AT5G06100 52.336 107 41 1 21 117 31 137 4.68e-35 131
MS.gene005488.t1 AT3G53200 56.075 107 37 1 19 115 6 112 7.34e-35 125
MS.gene005488.t1 AT4G34990 59.804 102 31 1 24 115 14 115 7.57e-35 126
MS.gene005488.t1 AT5G07690 55.769 104 36 1 21 114 11 114 7.58e-35 127
MS.gene005488.t1 AT2G32460 52.336 107 41 1 21 117 5 111 7.79e-35 130
MS.gene005488.t1 AT2G32460 52.336 107 41 1 21 117 17 123 8.00e-35 130
MS.gene005488.t1 AT5G07700 54.286 105 38 1 21 115 11 115 2.05e-34 127
MS.gene005488.t1 AT5G07700 54.286 105 38 1 21 115 11 115 2.05e-34 127
MS.gene005488.t1 AT2G47460 56.075 107 37 1 19 115 9 115 2.08e-34 127
MS.gene005488.t1 AT1G35515 57.692 104 34 1 22 115 12 115 2.51e-34 123
MS.gene005488.t1 AT4G17785 50.407 123 51 1 17 129 8 130 2.58e-34 127
MS.gene005488.t1 AT5G49330 58.095 105 34 1 21 115 11 115 2.67e-34 126
MS.gene005488.t1 AT5G60890 39.773 176 94 3 19 182 9 184 2.71e-34 125
MS.gene005488.t1 AT4G17785 50.407 123 51 1 17 129 8 130 3.12e-34 127
MS.gene005488.t1 AT5G61420 54.286 105 38 1 21 115 11 115 3.34e-34 127
MS.gene005488.t1 AT3G27920 54.545 110 39 2 16 115 9 117 4.41e-34 123
MS.gene005488.t1 AT4G38620 59.804 102 31 1 24 115 14 115 4.59e-34 124
MS.gene005488.t1 AT1G09540 44.966 149 57 2 22 160 12 145 5.98e-34 126
MS.gene005488.t1 AT1G79180 50.000 118 49 1 11 118 3 120 6.31e-34 124
MS.gene005488.t1 AT1G18570 56.075 107 37 1 19 115 10 116 6.42e-34 125
MS.gene005488.t1 AT5G62470 54.128 109 40 1 21 119 11 119 6.49e-34 125
MS.gene005488.t1 AT1G63910 50.427 117 48 1 12 118 2 118 7.34e-34 126
MS.gene005488.t1 AT4G09460 59.804 102 31 1 24 115 14 115 8.43e-34 122
MS.gene005488.t1 AT3G62610 55.140 107 38 1 19 115 9 115 8.52e-34 125
MS.gene005488.t1 AT3G13890 49.123 114 48 1 12 115 2 115 8.73e-34 125
MS.gene005488.t1 AT3G61250 49.167 120 51 1 18 127 8 127 9.54e-34 124
MS.gene005488.t1 AT1G57560 56.731 104 35 1 22 115 12 115 9.93e-34 124
MS.gene005488.t1 AT1G57560 56.731 104 35 1 22 115 12 115 1.11e-33 123
MS.gene005488.t1 AT2G16720 58.654 104 33 1 22 115 12 115 1.11e-33 123
MS.gene005488.t1 AT1G16490 49.565 115 48 1 11 115 3 117 1.83e-33 122
MS.gene005488.t1 AT5G35550 50.769 130 46 2 22 133 14 143 2.66e-33 122
MS.gene005488.t1 AT3G46130 60.674 89 35 0 36 124 1 89 2.85e-33 120
MS.gene005488.t1 AT5G26660 53.153 111 42 1 22 122 12 122 4.11e-33 123
MS.gene005488.t1 AT3G13890 46.341 123 47 1 12 115 2 124 7.08e-33 123
MS.gene005488.t1 AT5G52600 51.351 111 44 1 16 116 6 116 1.07e-32 119
MS.gene005488.t1 AT1G08810 50.000 116 48 1 21 126 11 126 1.81e-32 120
MS.gene005488.t1 AT3G08500 47.368 133 54 2 1 117 3 135 2.08e-32 121
MS.gene005488.t1 AT3G12720 50.962 104 41 1 22 115 22 125 2.16e-32 120
MS.gene005488.t1 AT5G59780 67.105 76 25 0 45 120 20 95 2.40e-32 118
MS.gene005488.t1 AT3G28910 51.786 112 44 1 21 122 11 122 3.90e-32 120
MS.gene005488.t1 AT3G46130 65.000 80 28 0 45 124 20 99 4.43e-32 118
MS.gene005488.t1 AT5G62470 53.704 108 41 1 21 119 11 118 4.57e-32 120
MS.gene005488.t1 AT1G56160 48.696 115 49 1 11 115 3 117 6.42e-32 119
MS.gene005488.t1 AT5G12870 50.926 108 43 1 22 119 18 125 8.33e-32 118
MS.gene005488.t1 AT2G26960 43.609 133 62 3 10 130 6 137 8.58e-32 121
MS.gene005488.t1 AT5G23000 50.459 109 43 1 18 115 8 116 9.56e-32 119
MS.gene005488.t1 AT1G74650 52.294 109 42 1 22 120 12 120 1.09e-31 119
MS.gene005488.t1 AT5G55020 51.402 107 42 1 22 118 26 132 1.43e-31 122
MS.gene005488.t1 AT4G37780 49.541 109 44 1 18 115 8 116 2.13e-31 118
MS.gene005488.t1 AT1G74080 52.885 104 39 1 21 114 11 114 4.25e-31 117
MS.gene005488.t1 AT4G01680 53.774 106 39 1 22 117 12 117 7.68e-31 115
MS.gene005488.t1 AT4G01680 53.774 106 39 1 22 117 12 117 1.30e-30 116
MS.gene005488.t1 AT2G36890 50.459 109 43 1 18 115 8 116 2.79e-30 115
MS.gene005488.t1 AT5G56110 45.802 131 57 3 16 135 9 136 3.71e-30 115
MS.gene005488.t1 AT1G74430 53.333 105 39 1 21 115 11 115 3.90e-30 114
MS.gene005488.t1 AT1G66370 37.500 208 96 5 17 202 3 198 5.04e-30 113
MS.gene005488.t1 AT5G65790 50.459 109 43 1 18 115 8 116 5.29e-30 115
MS.gene005488.t1 AT2G36890 50.459 109 43 1 18 115 49 157 5.84e-30 115
MS.gene005488.t1 AT5G57620 49.541 109 44 1 18 115 8 116 6.61e-30 114
MS.gene005488.t1 AT1G79180 39.735 151 48 1 11 118 3 153 8.04e-30 114
MS.gene005488.t1 AT5G52260 50.000 116 44 2 23 124 13 128 1.86e-29 112
MS.gene005488.t1 AT4G25560 51.456 103 40 1 23 115 11 113 3.14e-29 112
MS.gene005488.t1 AT3G53200 59.756 82 30 1 34 115 1 79 4.56e-29 109
MS.gene005488.t1 AT3G28470 48.544 103 43 1 18 110 8 110 4.60e-29 112
MS.gene005488.t1 AT3G49690 48.624 109 45 1 18 115 8 116 6.33e-29 111
MS.gene005488.t1 AT3G48920 44.538 119 56 1 6 114 2 120 7.92e-29 110
MS.gene005488.t1 AT4G01680 48.305 118 39 1 22 117 12 129 8.28e-29 112
MS.gene005488.t1 AT3G12820 48.148 108 46 1 18 115 10 117 1.62e-28 108
MS.gene005488.t1 AT1G18710 49.524 105 43 1 21 115 11 115 2.79e-27 106
MS.gene005488.t1 AT5G26660 57.692 78 33 0 45 122 14 91 3.40e-26 104
MS.gene005488.t1 AT5G35550 52.427 103 41 2 39 133 44 146 3.73e-26 103
MS.gene005488.t1 AT3G60460 41.379 116 55 3 15 119 6 119 8.25e-26 103
MS.gene005488.t1 AT3G47600 57.500 80 32 1 45 122 39 118 1.03e-25 103
MS.gene005488.t1 AT5G14750 63.235 68 25 0 48 115 18 85 1.91e-25 99.0
MS.gene005488.t1 AT1G56650 46.377 138 58 4 13 140 3 134 3.39e-25 100
MS.gene005488.t1 AT1G66380 52.381 105 40 1 21 115 7 111 6.97e-25 96.7
MS.gene005488.t1 AT3G12820 61.765 68 26 0 48 115 2 69 1.39e-24 97.4
MS.gene005488.t1 AT1G66390 51.327 113 41 2 13 115 3 111 5.30e-24 97.4
MS.gene005488.t1 AT2G26950 41.748 103 50 1 22 114 16 118 2.06e-23 98.2
MS.gene005488.t1 AT5G11050 33.166 199 110 5 24 200 105 302 2.80e-21 92.4
MS.gene005488.t1 AT3G27785 37.500 128 64 2 24 135 189 316 4.45e-21 92.0
MS.gene005488.t1 AT3G23250 32.370 173 77 5 58 224 1 139 9.92e-21 88.2
MS.gene005488.t1 AT3G09370 40.000 105 54 1 22 117 128 232 1.67e-20 90.5
MS.gene005488.t1 AT3G09370 40.000 105 54 1 22 117 133 237 1.84e-20 90.5
MS.gene005488.t1 AT3G09370 40.000 105 54 1 22 117 141 245 2.09e-20 90.5
MS.gene005488.t1 AT5G02320 41.748 103 51 1 22 115 125 227 2.38e-20 90.5
MS.gene005488.t1 AT5G02320 41.748 103 51 1 22 115 125 227 2.38e-20 90.5
MS.gene005488.t1 AT4G18770 38.596 114 57 2 19 121 212 323 2.63e-20 89.7
MS.gene005488.t1 AT2G23290 43.137 102 49 1 24 116 13 114 3.83e-20 88.2
MS.gene005488.t1 AT5G02320 41.748 103 51 1 22 115 65 167 4.29e-20 89.4
MS.gene005488.t1 AT5G58850 37.931 116 63 1 14 120 95 210 1.54e-19 87.4
MS.gene005488.t1 AT1G69560 27.155 232 134 7 12 213 98 324 2.06e-19 86.3
MS.gene005488.t1 AT1G22640 54.930 71 32 0 58 128 1 71 2.35e-19 83.6
MS.gene005488.t1 AT1G69560 27.155 232 134 7 12 213 114 340 2.84e-19 86.3
MS.gene005488.t1 AT5G11510 40.777 103 52 1 22 115 79 181 4.80e-19 86.7
MS.gene005488.t1 AT5G11510 40.777 103 52 1 22 115 79 181 4.80e-19 86.7
MS.gene005488.t1 AT5G11510 40.777 103 52 1 22 115 79 181 4.80e-19 86.7
MS.gene005488.t1 AT5G11510 40.777 103 52 1 22 115 79 181 6.19e-19 86.3
MS.gene005488.t1 AT5G11510 40.777 103 52 1 22 115 79 181 6.55e-19 86.3
MS.gene005488.t1 AT4G37260 41.284 109 50 2 24 123 13 116 7.38e-19 84.7
MS.gene005488.t1 AT3G55730 40.000 105 54 2 24 119 56 160 9.80e-19 85.1
MS.gene005488.t1 AT3G09230 44.898 98 37 2 24 108 55 148 2.04e-18 84.0
MS.gene005488.t1 AT2G39880 40.385 104 53 2 24 118 50 153 3.64e-18 83.2
MS.gene005488.t1 AT5G59780 66.667 51 17 0 70 120 1 51 4.14e-18 79.7
MS.gene005488.t1 AT4G32730 36.893 103 56 1 22 115 85 187 4.36e-18 84.0
MS.gene005488.t1 AT4G32730 36.893 103 56 1 22 115 85 187 4.36e-18 84.0
MS.gene005488.t1 AT4G32730 36.893 103 56 1 22 115 85 187 4.36e-18 84.0
MS.gene005488.t1 AT4G32730 36.893 103 56 1 22 115 85 187 4.36e-18 84.0
MS.gene005488.t1 AT4G32730 37.864 103 55 1 22 115 85 187 4.90e-18 84.0
MS.gene005488.t1 AT1G66380 57.746 71 30 0 45 115 8 78 4.98e-18 77.4
MS.gene005488.t1 AT5G14750 58.621 58 24 0 58 115 1 58 5.52e-18 78.6
MS.gene005488.t1 AT5G14750 58.621 58 24 0 58 115 1 58 5.52e-18 78.6
MS.gene005488.t1 AT1G26780 38.679 106 56 2 22 118 96 201 6.60e-18 82.4
MS.gene005488.t1 AT3G46130 63.636 55 20 0 70 124 1 55 7.01e-18 79.7
MS.gene005488.t1 AT1G26780 38.679 106 56 2 22 118 96 201 7.94e-18 81.3
MS.gene005488.t1 AT3G29020 35.577 104 58 2 24 118 65 168 1.20e-17 79.7
MS.gene005488.t1 AT1G18960 36.975 119 63 4 24 132 10 126 1.46e-17 80.9
MS.gene005488.t1 AT3G29020 35.577 104 58 2 24 118 67 170 2.25e-17 80.1
MS.gene005488.t1 AT1G73410 41.346 104 52 2 24 118 6 109 7.21e-17 77.8
MS.gene005488.t1 AT5G17800 32.540 126 76 1 2 118 71 196 1.11e-16 78.6
MS.gene005488.t1 AT1G73410 41.346 104 52 2 24 118 6 109 1.18e-16 76.6
MS.gene005488.t1 AT5G67300 39.216 102 53 1 24 116 6 107 1.30e-16 78.2
MS.gene005488.t1 AT1G14350 36.364 132 72 3 27 146 28 159 1.55e-16 79.0
MS.gene005488.t1 AT1G14350 36.364 132 72 3 27 146 28 159 1.55e-16 79.0
MS.gene005488.t1 AT1G17950 47.887 71 37 0 48 118 38 108 3.20e-16 76.3
MS.gene005488.t1 AT1G71030 44.872 78 43 0 51 128 5 82 3.97e-16 74.7
MS.gene005488.t1 AT1G71030 44.872 78 43 0 51 128 19 96 4.35e-16 74.7
MS.gene005488.t1 AT3G50060 41.489 94 46 1 24 108 6 99 5.18e-16 76.3
MS.gene005488.t1 AT2G37630 35.849 106 56 1 27 120 7 112 1.36e-15 75.9
MS.gene005488.t1 AT4G00540 34.454 119 66 1 19 125 98 216 1.73e-15 75.9
MS.gene005488.t1 AT4G00540 34.454 119 66 1 19 125 96 214 2.26e-15 75.5
MS.gene005488.t1 AT5G40360 37.234 94 50 1 24 108 158 251 2.83e-15 74.7
MS.gene005488.t1 AT5G39700 36.066 122 64 4 16 125 48 167 6.77e-15 71.2
MS.gene005488.t1 AT4G33450 36.275 102 63 1 37 138 43 142 7.59e-15 72.4
MS.gene005488.t1 AT2G25230 44.444 63 35 0 48 110 59 121 1.97e-14 70.9
MS.gene005488.t1 AT2G02820 35.000 120 61 2 27 129 33 152 3.03e-14 72.4
MS.gene005488.t1 AT2G02820 35.000 120 61 2 27 129 33 152 3.29e-14 71.6
MS.gene005488.t1 AT2G02820 35.000 120 61 2 27 129 33 152 3.41e-14 72.0
MS.gene005488.t1 AT1G66380 49.367 79 30 1 21 89 7 85 2.96e-13 65.1
MS.gene005488.t1 AT5G40430 32.673 101 56 2 20 110 50 148 2.32e-12 65.5
MS.gene005488.t1 AT4G25560 56.522 46 20 0 70 115 2 47 1.03e-11 63.2

Find 62 sgRNAs with CRISPR-Local

Find 79 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAGAGGTATGGATATTATTA+AGG 0.274881 1.1:+64237386 MS.gene005488:CDS
GCTGAATTTGTTCGAGCAAT+CGG 0.324431 1.1:-64238156 None:intergenic
TTCTTGACCTCCACTCTCGC+TGG 0.343930 1.1:+64237778 MS.gene005488:CDS
ACATTGCAAAGTTCAGTTTC+AGG 0.345402 1.1:+64238241 MS.gene005488:CDS
GAAAATTGCACAACATCTTC+CGG 0.351207 1.1:+64238012 MS.gene005488:CDS
CCGTTTGGATTATTCGTGTC+GGG 0.362353 1.1:-64238193 None:intergenic
CAACAACCAGGTTTCAGAAC+AGG 0.368209 1.1:+64238381 MS.gene005488:CDS
ATTTCATTGTCTGTTCTTCC+CGG 0.372727 1.1:-64238031 None:intergenic
CTGAATTTGTTCGAGCAATC+GGG 0.374768 1.1:-64238155 None:intergenic
AGAAGGATATTTGATCCGTT+TGG 0.402041 1.1:-64238208 None:intergenic
GTGGTAAAAGTTGCAGATTA+AGG 0.427674 1.1:+64237691 MS.gene005488:CDS
TCCACTCTCGCTGGGGCAAT+AGG 0.434932 1.1:+64237787 MS.gene005488:CDS
ATTAGAAGAGGACACCATTC+TGG 0.442186 1.1:+64237467 MS.gene005488:CDS
TCTTCCCCTGTTCTGAAACC+TGG 0.442222 1.1:-64238387 None:intergenic
AAAATTGCACAACATCTTCC+GGG 0.442714 1.1:+64238013 MS.gene005488:CDS
ATATTCCCGCGGCGTACATC+GGG 0.454217 1.1:-64237732 None:intergenic
TCTTGACCTCCACTCTCGCT+GGG 0.459839 1.1:+64237779 MS.gene005488:CDS
TGTCTGAATTTGAAGCAACT+TGG 0.467882 1.1:-64238303 None:intergenic
TAATTAATTATACAGGTTTG+AGG 0.471742 1.1:+64237664 MS.gene005488:intron
GATATTCCCGCGGCGTACAT+CGG 0.477058 1.1:-64237733 None:intergenic
CAGGGTTAAGAAAAGGTCCT+TGG 0.492516 1.1:+64237442 MS.gene005488:CDS
ATTATTAAGGTTCAGAAAGG+TGG 0.498662 1.1:+64237399 MS.gene005488:CDS
AGGAATCAGTGGTGTTTCCT+CGG 0.499809 1.1:+64238261 MS.gene005488:CDS
AATGAGACAGGGTTAAGAAA+AGG 0.510276 1.1:+64237435 MS.gene005488:CDS
TCTGCAAAGGAAAATGAGAC+AGG 0.518075 1.1:+64237423 MS.gene005488:CDS
AACAACCAGGTTTCAGAACA+GGG 0.521106 1.1:+64238382 MS.gene005488:CDS
ACCTATTGCCCCAGCGAGAG+TGG 0.529174 1.1:-64237788 None:intergenic
GATATTATTAAGGTTCAGAA+AGG 0.529508 1.1:+64237396 MS.gene005488:CDS
TTATTAAGGTTCAGAAAGGT+GGG 0.533186 1.1:+64237400 MS.gene005488:CDS
GTGTCGGGGAATTGTTGTGC+GGG 0.544802 1.1:-64238178 None:intergenic
TCCGTTTGGATTATTCGTGT+CGG 0.545328 1.1:-64238194 None:intergenic
TATACAGGTTTGAGGAGAAG+TGG 0.547988 1.1:+64237672 MS.gene005488:intron
TGCGTCCCGATGTACGCCGC+GGG 0.548243 1.1:+64237727 MS.gene005488:CDS
TGCTTGTGATGGTGACTCGT+TGG 0.569062 1.1:+64238414 MS.gene005488:CDS
TGTAATGTAATCAACCAGAA+TGG 0.571598 1.1:-64237481 None:intergenic
AAGCACATATATGAGAGGTA+TGG 0.571829 1.1:+64237374 None:intergenic
GTTTCAGAACAGGGGAAGAG+TGG 0.587172 1.1:+64238391 MS.gene005488:CDS
GTGTCCTCTTCTAATGTCCA+AGG 0.590757 1.1:-64237459 None:intergenic
CCCGACACGAATAATCCAAA+CGG 0.591334 1.1:+64238193 MS.gene005488:CDS
GTGACTCGTTGGAGAGTATG+TGG 0.591387 1.1:+64238425 MS.gene005488:CDS
TGAATTTGTTCGAGCAATCG+GGG 0.598757 1.1:-64238154 None:intergenic
TTCTACTGATGAAGAGTCCG+AGG 0.602605 1.1:-64238278 None:intergenic
CGTTTGGATTATTCGTGTCG+GGG 0.603555 1.1:-64238192 None:intergenic
TCAGAAAGGTGGGTCTGCAA+AGG 0.606644 1.1:+64237410 MS.gene005488:CDS
AGTTCAGTTTCAGGAATCAG+TGG 0.614581 1.1:+64238250 MS.gene005488:CDS
CGTGTCGGGGAATTGTTGTG+CGG 0.618297 1.1:-64238179 None:intergenic
ATGGTCAAGTTTCAACAACC+AGG 0.619728 1.1:+64238369 MS.gene005488:CDS
TACATTACAATACACGGTGA+AGG 0.619822 1.1:+64237495 MS.gene005488:CDS
GTAAAAGTTGCAGATTAAGG+TGG 0.634392 1.1:+64237694 MS.gene005488:CDS
GCCATGAAGGTTCAAAACCA+TGG 0.636081 1.1:+64238350 MS.gene005488:CDS
GGGAAGAGTGGTGCTTGTGA+TGG 0.637267 1.1:+64238403 MS.gene005488:CDS
AGGTCCTTGGACATTAGAAG+AGG 0.639024 1.1:+64237455 MS.gene005488:CDS
CTTGACCTCCACTCTCGCTG+GGG 0.639112 1.1:+64237780 MS.gene005488:CDS
CTTGAACTGTGATATTCCCG+CGG 0.651123 1.1:-64237743 None:intergenic
TTGCGTCCCGATGTACGCCG+CGG 0.657533 1.1:+64237726 MS.gene005488:CDS
TACACAAGCACATATATGAG+AGG 0.672791 1.1:+64237369 None:intergenic
CTGCAAAGGAAAATGAGACA+GGG 0.674876 1.1:+64237424 MS.gene005488:CDS
GTTGATTACATTACAATACA+CGG 0.679344 1.1:+64237489 MS.gene005488:CDS
TATTGCCCCAGCGAGAGTGG+AGG 0.683135 1.1:-64237785 None:intergenic
ACAACCAGGTTTCAGAACAG+GGG 0.690824 1.1:+64238383 MS.gene005488:CDS
TGGTTGTTGAAACTTGACCA+TGG 0.698563 1.1:-64238367 None:intergenic
TGTGGAACGATGAGAACATG+TGG 0.754142 1.1:+64238443 MS.gene005488:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AACTAATTAATTAATTATAC+AGG + chr1.1:64237657-64237676 MS.gene005488:intron 10.0%
!! TAAAAAACAAACATATTATT+AGG - chr1.1:64237982-64238001 None:intergenic 10.0%
!!! TAATATGTTTGTTTTTTAAT+AGG + chr1.1:64237984-64238003 MS.gene005488:intron 10.0%
!!! TCTTTAAATTTATTAGTTTA+TGG + chr1.1:64237582-64237601 MS.gene005488:intron 10.0%
!! ACAATGAAATAAAAAACTAT+TGG + chr1.1:64238044-64238063 MS.gene005488:CDS 15.0%
!!! ATTTAAAACACAATGATAAT+AGG - chr1.1:64237854-64237873 None:intergenic 15.0%
!! CACTATTTATAAACTCTAAT+CGG - chr1.1:64237946-64237965 None:intergenic 20.0%
!! TAATTAATTATACAGGTTTG+AGG + chr1.1:64237664-64237683 MS.gene005488:intron 20.0%
!! TTCAGACAAAAATAATTCTT+TGG + chr1.1:64238318-64238337 MS.gene005488:CDS 20.0%
!!! TATGTTTGTTTTTTAATAGG+TGG + chr1.1:64237987-64238006 MS.gene005488:intron 20.0%
! GATATTATTAAGGTTCAGAA+AGG + chr1.1:64237396-64237415 MS.gene005488:CDS 25.0%
! GTTGATTACATTACAATACA+CGG + chr1.1:64237489-64237508 MS.gene005488:CDS 25.0%
!!! AATAATTCTTTGGAGCTTTT+AGG + chr1.1:64238328-64238347 MS.gene005488:CDS 25.0%
ATTATTAAGGTTCAGAAAGG+TGG + chr1.1:64237399-64237418 MS.gene005488:CDS 30.0%
TGTAATGTAATCAACCAGAA+TGG - chr1.1:64237484-64237503 None:intergenic 30.0%
TTATTAAGGTTCAGAAAGGT+GGG + chr1.1:64237400-64237419 MS.gene005488:CDS 30.0%
! GAGAGGTATGGATATTATTA+AGG + chr1.1:64237386-64237405 MS.gene005488:CDS 30.0%
AAAATTGCACAACATCTTCC+GGG + chr1.1:64238013-64238032 MS.gene005488:CDS 35.0%
AATGAGACAGGGTTAAGAAA+AGG + chr1.1:64237435-64237454 MS.gene005488:CDS 35.0%
ACATTGCAAAGTTCAGTTTC+AGG + chr1.1:64238241-64238260 MS.gene005488:CDS 35.0%
AGAAGGATATTTGATCCGTT+TGG - chr1.1:64238211-64238230 None:intergenic 35.0%
ATTTCATTGTCTGTTCTTCC+CGG - chr1.1:64238034-64238053 None:intergenic 35.0%
GAAAATTGCACAACATCTTC+CGG + chr1.1:64238012-64238031 MS.gene005488:CDS 35.0%
GTAAAAGTTGCAGATTAAGG+TGG + chr1.1:64237694-64237713 MS.gene005488:CDS 35.0%
GTGGTAAAAGTTGCAGATTA+AGG + chr1.1:64237691-64237710 MS.gene005488:CDS 35.0%
TACATTACAATACACGGTGA+AGG + chr1.1:64237495-64237514 MS.gene005488:CDS 35.0%
! TGTCTGAATTTGAAGCAACT+TGG - chr1.1:64238306-64238325 None:intergenic 35.0%
!! GCAATGTGTTTTGTTGAAGA+AGG - chr1.1:64238228-64238247 None:intergenic 35.0%
AACAACCAGGTTTCAGAACA+GGG + chr1.1:64238382-64238401 MS.gene005488:CDS 40.0%
AGTTCAGTTTCAGGAATCAG+TGG + chr1.1:64238250-64238269 MS.gene005488:CDS 40.0%
ATGGTCAAGTTTCAACAACC+AGG + chr1.1:64238369-64238388 MS.gene005488:CDS 40.0%
ATTAGAAGAGGACACCATTC+TGG + chr1.1:64237467-64237486 MS.gene005488:CDS 40.0%
CTGCAAAGGAAAATGAGACA+GGG + chr1.1:64237424-64237443 MS.gene005488:CDS 40.0%
TATACAGGTTTGAGGAGAAG+TGG + chr1.1:64237672-64237691 MS.gene005488:intron 40.0%
TCCGTTTGGATTATTCGTGT+CGG - chr1.1:64238197-64238216 None:intergenic 40.0%
TCTGCAAAGGAAAATGAGAC+AGG + chr1.1:64237423-64237442 MS.gene005488:CDS 40.0%
TGGTTGTTGAAACTTGACCA+TGG - chr1.1:64238370-64238389 None:intergenic 40.0%
! CTGAATTTGTTCGAGCAATC+GGG - chr1.1:64238158-64238177 None:intergenic 40.0%
! GCTGAATTTGTTCGAGCAAT+CGG - chr1.1:64238159-64238178 None:intergenic 40.0%
! TCTAATCGGACGCAACATTT+TGG - chr1.1:64237932-64237951 None:intergenic 40.0%
! TGAATTTGTTCGAGCAATCG+GGG - chr1.1:64238157-64238176 None:intergenic 40.0%
!!! ACCATGGTTTTGAACCTTCA+TGG - chr1.1:64238354-64238373 None:intergenic 40.0%
AATACCCTTGCATCTTCTGC+AGG + chr1.1:64237525-64237544 MS.gene005488:intron 45.0%
ACAACCAGGTTTCAGAACAG+GGG + chr1.1:64238383-64238402 MS.gene005488:CDS 45.0%
AGGAATCAGTGGTGTTTCCT+CGG + chr1.1:64238261-64238280 MS.gene005488:CDS 45.0%
AGGTCCTTGGACATTAGAAG+AGG + chr1.1:64237455-64237474 MS.gene005488:CDS 45.0%
CAACAACCAGGTTTCAGAAC+AGG + chr1.1:64238381-64238400 MS.gene005488:CDS 45.0%
CAGGGTTAAGAAAAGGTCCT+TGG + chr1.1:64237442-64237461 MS.gene005488:CDS 45.0%
CCCGACACGAATAATCCAAA+CGG + chr1.1:64238193-64238212 MS.gene005488:CDS 45.0%
CCGTTTGGATTATTCGTGTC+GGG - chr1.1:64238196-64238215 None:intergenic 45.0%
CGTTTGGATTATTCGTGTCG+GGG - chr1.1:64238195-64238214 None:intergenic 45.0%
CTTGAACTGTGATATTCCCG+CGG - chr1.1:64237746-64237765 None:intergenic 45.0%
GCCATGAAGGTTCAAAACCA+TGG + chr1.1:64238350-64238369 MS.gene005488:CDS 45.0%
GTGTCCTCTTCTAATGTCCA+AGG - chr1.1:64237462-64237481 None:intergenic 45.0%
TGTGGAACGATGAGAACATG+TGG + chr1.1:64238443-64238462 MS.gene005488:CDS 45.0%
TTCTACTGATGAAGAGTCCG+AGG - chr1.1:64238281-64238300 None:intergenic 45.0%
! GAGACGTTTTACGTCACGTT+TGG + chr1.1:64238128-64238147 MS.gene005488:CDS 45.0%
! TTGGAGCTTTTAGGCCATGA+AGG + chr1.1:64238337-64238356 MS.gene005488:CDS 45.0%
ACATGCCTGCAGAAGATGCA+AGG - chr1.1:64237533-64237552 None:intergenic 50.0%
CAATACACGGTGAAGGTCAC+TGG + chr1.1:64237502-64237521 MS.gene005488:intron 50.0%
CATGCCTGCAGAAGATGCAA+GGG - chr1.1:64237532-64237551 None:intergenic 50.0%
GTTTCAGAACAGGGGAAGAG+TGG + chr1.1:64238391-64238410 MS.gene005488:CDS 50.0%
TCAGAAAGGTGGGTCTGCAA+AGG + chr1.1:64237410-64237429 MS.gene005488:CDS 50.0%
! GTGACTCGTTGGAGAGTATG+TGG + chr1.1:64238425-64238444 MS.gene005488:CDS 50.0%
! TGCTTGTGATGGTGACTCGT+TGG + chr1.1:64238414-64238433 MS.gene005488:CDS 50.0%
!! TCTTCCCCTGTTCTGAAACC+TGG - chr1.1:64238390-64238409 None:intergenic 50.0%
ATATTCCCGCGGCGTACATC+GGG - chr1.1:64237735-64237754 None:intergenic 55.0%
CGTGTCGGGGAATTGTTGTG+CGG - chr1.1:64238182-64238201 None:intergenic 55.0%
GATATTCCCGCGGCGTACAT+CGG - chr1.1:64237736-64237755 None:intergenic 55.0%
GGGAAGAGTGGTGCTTGTGA+TGG + chr1.1:64238403-64238422 MS.gene005488:CDS 55.0%
GTGTCGGGGAATTGTTGTGC+GGG - chr1.1:64238181-64238200 None:intergenic 55.0%
TCTTGACCTCCACTCTCGCT+GGG + chr1.1:64237779-64237798 MS.gene005488:CDS 55.0%
TTCTTGACCTCCACTCTCGC+TGG + chr1.1:64237778-64237797 MS.gene005488:CDS 55.0%
ACCTATTGCCCCAGCGAGAG+TGG - chr1.1:64237791-64237810 None:intergenic 60.0%
CTTGACCTCCACTCTCGCTG+GGG + chr1.1:64237780-64237799 MS.gene005488:CDS 60.0%
TATTGCCCCAGCGAGAGTGG+AGG - chr1.1:64237788-64237807 None:intergenic 60.0%
TCCACTCTCGCTGGGGCAAT+AGG + chr1.1:64237787-64237806 MS.gene005488:CDS 60.0%
TTGCGTCCCGATGTACGCCG+CGG + chr1.1:64237726-64237745 MS.gene005488:CDS 65.0%
TGCGTCCCGATGTACGCCGC+GGG + chr1.1:64237727-64237746 MS.gene005488:CDS 70.0%


Chromosome Type Strat End Strand Name
chr1.1 gene 64237384 64238519 64237384 ID=MS.gene005488
chr1.1 mRNA 64237384 64238519 64237384 ID=MS.gene005488.t1;Parent=MS.gene005488
chr1.1 exon 64237384 64237516 64237384 ID=MS.gene005488.t1.exon1;Parent=MS.gene005488.t1
chr1.1 CDS 64237384 64237516 64237384 ID=cds.MS.gene005488.t1;Parent=MS.gene005488.t1
chr1.1 exon 64237679 64237808 64237679 ID=MS.gene005488.t1.exon2;Parent=MS.gene005488.t1
chr1.1 CDS 64237679 64237808 64237679 ID=cds.MS.gene005488.t1;Parent=MS.gene005488.t1
chr1.1 exon 64238006 64238519 64238006 ID=MS.gene005488.t1.exon3;Parent=MS.gene005488.t1
chr1.1 CDS 64238006 64238519 64238006 ID=cds.MS.gene005488.t1;Parent=MS.gene005488.t1
Gene Sequence

>MS.gene005488

ATGAGAGGTATGGATATTATTAAGGTTCAGAAAGGTGGGTCTGCAAAGGAAAATGAGACAGGGTTAAGAAAAGGTCCTTGGACATTAGAAGAGGACACCATTCTGGTTGATTACATTACAATACACGGTGAAGGTCACTGGAATACCCTTGCATCTTCTGCAGGCATGTATATTTTTATATATTTTCTTCTAGCTAGCTCTTTAAATTTATTAGTTTATGGCATATATAGCTGCATGACTAGCTTATTGATTCTCATAATCTATTCTAAACAAAACTAATTAATTAATTATACAGGTTTGAGGAGAAGTGGTAAAAGTTGCAGATTAAGGTGGCTAAACTACTTGCGTCCCGATGTACGCCGCGGGAATATCACAGTTCAAGAACAGATATTGATTCTTGACCTCCACTCTCGCTGGGGCAATAGGTATACAAAATCTTCTATTTTCATACTTTACTTACTTTATAGCCTATTATCATTGTGTTTTAAATTCAAATAACATGAACTTATAATGCATACACATATATATATATGTATTGAAAAAAACCAAAATGTTGCGTCCGATTAGAGTTTATAAATAGTGACGACATATTTCACCTAATAATATGTTTGTTTTTTAATAGGTGGTCGAAAATTGCACAACATCTTCCGGGAAGAACAGACAATGAAATAAAAAACTATTGGAGAACAAGAGTGATCAAGCAAGCAAAACAGCTCAAGTGTGATGTCAACAGCAAACAATTCAGAGACGTTTTACGTCACGTTTGGATGCCCCGATTGCTCGAACAAATTCAGCCCGCACAACAATTCCCCGACACGAATAATCCAAACGGATCAAATATCCTTCTTCAACAAAACACATTGCAAAGTTCAGTTTCAGGAATCAGTGGTGTTTCCTCGGACTCTTCATCAGTAGAATTCCAAGTTGCTTCAAATTCAGACAAAAATAATTCTTTGGAGCTTTTAGGCCATGAAGGTTCAAAACCATGGTCAAGTTTCAACAACCAGGTTTCAGAACAGGGGAAGAGTGGTGCTTGTGATGGTGACTCGTTGGAGAGTATGTGGAACGATGAGAACATGTGGTTTTTGCAACAACTTTACGAAGATGTTGAAATAAAATACAATTTACTTGCGTGA
Protein sequence

>MS.gene005488.t1

MRGMDIIKVQKGGSAKENETGLRKGPWTLEEDTILVDYITIHGEGLRRSGKSCRLRWLNYLRPDVRRGNITVQEQILILDLHSRWGNRWSKIAQHLPGRTDNEIKNYWRTRVIKQAKQLKCDVNSKQFRDVLRHVWMPRLLEQIQPAQQFPDTNNPNGSNILLQQNTLQSSVSGISGVSSDSSSVEFQVASNSDKNNSLELLGHEGSKPWSSFNNQVSEQGKSGACDGDSLESMWNDENMWFLQQLYEDVEIKYNLLA