AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene005489

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene005489.t1 MTR_1g086530 94.245 278 16 0 1 278 1 278 0.0 546
MS.gene005489.t1 MTR_1g086510 55.078 256 97 4 26 276 14 256 1.22e-88 265
MS.gene005489.t1 MTR_4g123040 73.050 141 38 0 26 166 17 157 8.31e-70 218
MS.gene005489.t1 MTR_2g033170 70.068 147 44 0 20 166 11 157 2.88e-69 217
MS.gene005489.t1 MTR_1g110460 56.287 167 70 1 33 199 26 189 2.47e-67 212
MS.gene005489.t1 MTR_7g035075 68.966 116 36 0 33 148 14 129 2.44e-57 182
MS.gene005489.t1 MTR_6g006030 72.222 108 30 0 33 140 14 121 8.48e-57 181
MS.gene005489.t1 MTR_1g045610 69.159 107 33 0 32 138 20 126 2.25e-51 169
MS.gene005489.t1 MTR_1g073170 60.833 120 45 1 19 138 8 125 6.84e-49 162
MS.gene005489.t1 MTR_4g063100 58.974 117 45 1 25 141 2 115 5.50e-46 155
MS.gene005489.t1 MTR_2g096380 59.633 109 44 0 33 141 6 114 1.49e-45 153
MS.gene005489.t1 MTR_8g027345 59.483 116 45 1 33 146 12 127 1.89e-43 150
MS.gene005489.t1 MTR_5g029840 52.459 122 58 0 29 150 8 129 6.94e-43 149
MS.gene005489.t1 MTR_3g052430 57.944 107 45 0 33 139 41 147 1.27e-42 153
MS.gene005489.t1 MTR_3g011610 60.185 108 43 0 31 138 35 142 1.93e-42 152
MS.gene005489.t1 MTR_3g052450 55.856 111 49 0 29 139 36 146 5.18e-42 151
MS.gene005489.t1 MTR_2g089620 56.481 108 47 0 29 136 8 115 2.83e-41 145
MS.gene005489.t1 MTR_1g085040 55.172 116 52 0 33 148 12 127 3.51e-41 145
MS.gene005489.t1 MTR_8g042410 56.481 108 47 0 31 138 35 142 5.47e-41 149
MS.gene005489.t1 MTR_4g478180 52.000 125 59 1 33 156 13 137 5.89e-41 145
MS.gene005489.t1 MTR_7g076740 48.299 147 68 3 29 174 8 147 6.31e-41 143
MS.gene005489.t1 MTR_7g117730 57.547 106 45 0 33 138 12 117 7.45e-41 142
MS.gene005489.t1 MTR_5g007370 50.388 129 63 1 29 156 8 136 1.19e-40 142
MS.gene005489.t1 MTR_4g102380 53.913 115 53 0 29 143 8 122 1.26e-40 142
MS.gene005489.t1 MTR_4g125520 55.963 109 48 0 33 141 12 120 1.58e-40 142
MS.gene005489.t1 MTR_3g097450 60.784 102 40 0 35 136 14 115 1.68e-40 142
MS.gene005489.t1 MTR_3g074520 50.000 134 66 1 29 162 8 140 1.71e-40 143
MS.gene005489.t1 MTR_1g076150 54.955 111 50 0 29 139 8 118 1.99e-40 141
MS.gene005489.t1 MTR_1g100653 56.075 107 47 0 33 139 12 118 3.03e-40 141
MS.gene005489.t1 MTR_1g021230 57.547 106 45 0 33 138 57 162 3.65e-40 145
MS.gene005489.t1 MTR_2g011660 54.054 111 51 0 33 143 13 123 7.63e-40 142
MS.gene005489.t1 MTR_8g020490 57.009 107 46 0 33 139 8 114 8.68e-40 139
MS.gene005489.t1 MTR_2g097910 56.481 108 47 0 33 140 20 127 1.31e-39 140
MS.gene005489.t1 MTR_4g091490 53.153 111 52 0 33 143 13 123 1.36e-39 141
MS.gene005489.t1 MTR_7g011170 54.955 111 50 0 33 143 12 122 1.37e-39 140
MS.gene005489.t1 MTR_5g078140 52.174 115 55 0 29 143 8 122 1.53e-39 140
MS.gene005489.t1 MTR_1g062940 55.660 106 47 0 33 138 6 111 1.61e-39 137
MS.gene005489.t1 MTR_3g065440 52.174 115 55 0 29 143 8 122 1.68e-39 140
MS.gene005489.t1 MTR_8g031360 39.779 181 94 2 28 193 8 188 1.78e-39 139
MS.gene005489.t1 MTR_5g079670 44.203 138 77 0 29 166 7 144 2.33e-39 137
MS.gene005489.t1 MTR_8g095390 52.101 119 57 0 35 153 14 132 2.45e-39 139
MS.gene005489.t1 MTR_7g096930 43.791 153 82 1 29 181 8 156 2.49e-39 139
MS.gene005489.t1 MTR_4g100720 56.364 110 48 0 32 141 12 121 2.80e-39 135
MS.gene005489.t1 MTR_1g112760 53.153 111 52 0 33 143 13 123 4.63e-39 136
MS.gene005489.t1 MTR_4g073420 58.824 102 42 0 35 136 14 115 1.04e-38 137
MS.gene005489.t1 MTR_1g043080 55.769 104 46 0 33 136 12 115 1.21e-38 136
MS.gene005489.t1 MTR_6g012690 53.043 115 54 0 29 143 8 122 1.40e-38 139
MS.gene005489.t1 MTR_3g077110 53.153 111 52 0 33 143 12 122 1.60e-38 138
MS.gene005489.t1 MTR_4g121460 55.085 118 50 1 29 146 8 122 1.74e-38 138
MS.gene005489.t1 MTR_7g010210 51.261 119 58 0 29 147 8 126 1.85e-38 137
MS.gene005489.t1 MTR_1g017000 52.294 109 51 1 29 136 8 116 2.04e-38 135
MS.gene005489.t1 MTR_7g115650 49.550 111 56 0 29 139 8 118 2.10e-38 134
MS.gene005489.t1 MTR_7g010210 51.261 119 58 0 29 147 8 126 2.55e-38 135
MS.gene005489.t1 MTR_4g065017 53.571 112 52 0 33 144 17 128 2.80e-38 137
MS.gene005489.t1 MTR_7g110830 54.955 111 50 0 33 143 12 122 3.08e-38 138
MS.gene005489.t1 MTR_8g017440 54.808 104 47 0 33 136 12 115 3.11e-38 137
MS.gene005489.t1 MTR_4g082230 51.695 118 57 0 33 150 12 129 4.57e-38 138
MS.gene005489.t1 MTR_2g099740 53.846 104 48 0 33 136 12 115 4.91e-38 138
MS.gene005489.t1 MTR_4g082290 51.695 118 57 0 33 150 12 129 5.35e-38 138
MS.gene005489.t1 MTR_3g083540 57.692 104 44 0 33 136 41 144 5.56e-38 135
MS.gene005489.t1 MTR_7g111290 54.310 116 53 0 33 148 12 127 5.75e-38 137
MS.gene005489.t1 MTR_0008s0280 54.286 105 48 0 34 138 13 117 7.47e-38 133
MS.gene005489.t1 MTR_8g098860 56.075 107 47 0 33 139 12 118 7.48e-38 136
MS.gene005489.t1 MTR_0008s0390 56.190 105 46 0 33 137 13 117 1.01e-37 134
MS.gene005489.t1 MTR_0251s0050 48.529 136 61 1 33 159 13 148 1.10e-37 134
MS.gene005489.t1 MTR_1g043050 45.833 144 71 2 33 176 12 148 1.49e-37 133
MS.gene005489.t1 MTR_0008s0470 56.190 105 46 0 33 137 13 117 1.53e-37 134
MS.gene005489.t1 MTR_3g039990 43.750 144 77 1 33 172 13 156 1.54e-37 135
MS.gene005489.t1 MTR_0140s0030 44.966 149 77 2 29 172 9 157 1.75e-37 135
MS.gene005489.t1 MTR_0489s0020 44.966 149 77 2 29 172 9 157 1.75e-37 135
MS.gene005489.t1 MTR_1g100667 52.137 117 56 0 34 150 14 130 1.96e-37 133
MS.gene005489.t1 MTR_2g064160 52.885 104 49 0 33 136 11 114 3.66e-37 134
MS.gene005489.t1 MTR_6g012180 57.282 103 44 0 29 131 8 110 4.88e-37 134
MS.gene005489.t1 MTR_2g088170 56.604 106 46 0 33 138 29 134 5.54e-37 136
MS.gene005489.t1 MTR_8g017540 52.885 104 49 0 33 136 58 161 5.74e-37 135
MS.gene005489.t1 MTR_1g085640 53.153 111 52 0 33 143 12 122 7.51e-37 135
MS.gene005489.t1 MTR_0063s0090 48.760 121 55 1 33 153 12 125 9.13e-37 130
MS.gene005489.t1 MTR_7g087130 51.327 113 55 0 33 145 12 124 1.04e-36 133
MS.gene005489.t1 MTR_4g057635 39.459 185 99 4 29 203 8 189 1.90e-36 132
MS.gene005489.t1 MTR_5g010020 57.576 99 42 0 33 131 12 110 2.39e-36 132
MS.gene005489.t1 MTR_8g017500 51.923 104 50 0 33 136 12 115 3.75e-36 132
MS.gene005489.t1 MTR_6g055910 55.340 103 46 0 34 136 15 117 4.65e-36 130
MS.gene005489.t1 MTR_3g028740 53.774 106 49 0 33 138 22 127 4.75e-36 132
MS.gene005489.t1 MTR_2g034790 53.509 114 50 1 33 146 12 122 4.99e-36 131
MS.gene005489.t1 MTR_4g105130 53.211 109 47 1 33 137 12 120 8.22e-36 131
MS.gene005489.t1 MTR_4g485530 49.558 113 57 0 35 147 14 126 1.07e-35 127
MS.gene005489.t1 MTR_2g089420 55.769 104 46 0 33 136 11 114 1.08e-35 133
MS.gene005489.t1 MTR_6g009430 49.565 115 58 0 29 143 8 122 1.72e-35 130
MS.gene005489.t1 MTR_2g095520 56.731 104 44 1 29 131 8 111 2.16e-35 129
MS.gene005489.t1 MTR_1g017140 55.046 109 48 1 29 136 8 116 2.41e-35 130
MS.gene005489.t1 MTR_2g089450 53.398 103 48 0 33 135 12 114 4.46e-35 127
MS.gene005489.t1 MTR_3g103570 55.046 109 48 1 29 136 8 116 7.25e-35 129
MS.gene005489.t1 MTR_6g090405 53.211 109 50 1 29 136 8 116 7.38e-35 126
MS.gene005489.t1 MTR_3g461490 50.450 111 55 0 33 143 12 122 7.51e-35 128
MS.gene005489.t1 MTR_5g014990 54.128 109 49 1 29 136 8 116 1.57e-34 127
MS.gene005489.t1 MTR_8g017340 44.444 126 69 1 33 157 12 137 2.51e-34 130
MS.gene005489.t1 MTR_2g067420 52.427 103 49 0 29 131 10 112 3.45e-34 126
MS.gene005489.t1 MTR_8g017390 51.429 105 50 1 33 136 12 116 6.31e-34 128
MS.gene005489.t1 MTR_8g017350 43.651 126 70 1 33 157 12 137 1.48e-33 129
MS.gene005489.t1 MTR_8g006470 46.087 115 61 1 27 140 4 118 1.53e-33 124
MS.gene005489.t1 MTR_0197s0010 47.059 119 63 0 38 156 6 124 1.92e-33 122
MS.gene005489.t1 MTR_4g128670 55.769 104 45 1 29 131 8 111 2.52e-33 124
MS.gene005489.t1 MTR_1g083630 47.009 117 62 0 22 138 1 117 3.49e-33 128
MS.gene005489.t1 MTR_5g079120 42.177 147 82 2 19 162 47 193 5.74e-33 122
MS.gene005489.t1 MTR_7g109320 53.211 109 51 0 33 141 12 120 7.33e-33 123
MS.gene005489.t1 MTR_4g097570 54.902 102 45 1 29 129 8 109 7.45e-33 122
MS.gene005489.t1 MTR_7g102110 46.032 126 67 1 29 153 8 133 8.91e-33 121
MS.gene005489.t1 MTR_5g042030 46.552 116 62 0 33 148 7 122 1.93e-32 121
MS.gene005489.t1 MTR_4g063100 65.789 76 26 0 66 141 11 86 2.69e-32 119
MS.gene005489.t1 MTR_8g060940 53.271 107 50 0 28 134 2 108 3.67e-32 119
MS.gene005489.t1 MTR_5g062790 40.764 157 80 4 25 168 1 157 4.33e-32 120
MS.gene005489.t1 MTR_4g097570 54.369 103 45 2 29 129 8 110 1.84e-31 118
MS.gene005489.t1 MTR_2g096380 65.789 76 26 0 66 141 20 95 1.94e-31 116
MS.gene005489.t1 MTR_7g017260 47.826 115 58 1 25 137 17 131 4.33e-31 117
MS.gene005489.t1 MTR_5g088080 48.544 103 52 1 34 135 13 115 5.88e-31 116
MS.gene005489.t1 MTR_5g088150 48.544 103 52 1 34 135 13 115 5.88e-31 116
MS.gene005489.t1 MTR_5g488210 48.544 103 52 1 34 135 13 115 5.88e-31 116
MS.gene005489.t1 MTR_5g088640 48.544 103 52 1 34 135 13 115 6.65e-31 116
MS.gene005489.t1 MTR_5g488170 49.000 100 50 1 34 132 13 112 8.89e-31 115
MS.gene005489.t1 MTR_5g079290 48.214 112 58 0 25 136 9 120 2.95e-30 114
MS.gene005489.t1 MTR_0247s0040 51.429 105 51 0 29 133 3 107 3.19e-30 112
MS.gene005489.t1 MTR_4g029540 46.729 107 56 1 33 138 10 116 4.01e-30 115
MS.gene005489.t1 MTR_5g078910 48.182 110 57 0 28 137 2 111 5.64e-30 114
MS.gene005489.t1 MTR_5g078950 50.000 106 53 0 28 133 2 107 5.67e-30 114
MS.gene005489.t1 MTR_5g088610 41.667 132 71 3 25 155 1 127 7.88e-30 115
MS.gene005489.t1 MTR_5g079220 46.218 119 64 0 18 136 6 124 8.22e-30 114
MS.gene005489.t1 MTR_5g078800 48.182 110 57 0 28 137 2 111 1.99e-29 112
MS.gene005489.t1 MTR_0001s0360 49.524 105 53 0 33 137 7 111 1.16e-28 110
MS.gene005489.t1 MTR_0193s0090 38.462 156 91 2 29 184 3 153 3.63e-28 107
MS.gene005489.t1 MTR_3g045430 45.082 122 67 0 22 143 2 123 4.50e-28 109
MS.gene005489.t1 MTR_5g078860 47.273 110 58 0 28 137 2 111 5.22e-28 109
MS.gene005489.t1 MTR_5g078930 41.085 129 72 1 25 149 1 129 1.89e-27 106
MS.gene005489.t1 MTR_6g055910 39.623 159 71 7 66 207 18 168 3.54e-26 103
MS.gene005489.t1 MTR_7g111290 58.333 84 35 0 65 148 2 85 4.41e-26 105
MS.gene005489.t1 MTR_1g085880 46.789 109 56 2 33 139 11 119 2.33e-25 100
MS.gene005489.t1 MTR_4g128190 38.525 122 61 2 33 153 11 119 1.00e-24 99.4
MS.gene005489.t1 MTR_3g101290 46.602 103 54 1 35 137 37 138 1.25e-24 99.0
MS.gene005489.t1 MTR_1g085770 46.789 109 56 2 33 139 11 119 1.27e-24 100
MS.gene005489.t1 MTR_4g019370 47.115 104 52 2 35 137 38 139 2.25e-24 100
MS.gene005489.t1 MTR_7g061330 44.118 102 56 1 35 136 113 213 7.64e-24 100
MS.gene005489.t1 MTR_7g461410 44.118 102 56 1 35 136 113 213 7.64e-24 100
MS.gene005489.t1 MTR_5g016510 43.119 109 61 1 35 143 5 112 8.31e-24 98.6
MS.gene005489.t1 MTR_7g061330 44.118 102 56 1 35 136 77 177 1.29e-23 100
MS.gene005489.t1 MTR_5g070020 33.750 160 101 3 27 183 114 271 1.72e-23 98.2
MS.gene005489.t1 MTR_5g007300 50.649 77 38 0 33 109 64 140 1.98e-23 93.2
MS.gene005489.t1 MTR_6g027340 38.739 111 65 2 35 144 16 124 2.70e-23 94.7
MS.gene005489.t1 MTR_6g015455 42.241 116 66 1 35 150 5 119 3.14e-23 99.8
MS.gene005489.t1 MTR_5g049190 44.898 98 51 2 33 129 17 112 5.53e-23 94.7
MS.gene005489.t1 MTR_7g061550 40.909 110 63 1 38 145 10 119 4.18e-22 94.7
MS.gene005489.t1 MTR_6g027360 37.168 113 68 2 33 144 76 186 4.93e-22 93.6
MS.gene005489.t1 MTR_4g105660 35.625 160 98 3 32 190 177 332 5.93e-22 94.7
MS.gene005489.t1 MTR_3g110028 40.777 103 58 2 35 136 85 185 1.68e-21 94.4
MS.gene005489.t1 MTR_4g094982 42.157 102 58 1 35 136 5 105 2.29e-21 91.3
MS.gene005489.t1 MTR_5g041570 40.566 106 60 2 35 139 134 237 2.96e-21 92.8
MS.gene005489.t1 MTR_1g026870 39.216 102 61 1 35 136 85 185 6.90e-21 92.8
MS.gene005489.t1 MTR_3g463400 39.815 108 62 2 35 141 133 238 7.08e-21 92.0
MS.gene005489.t1 MTR_3g089045 40.870 115 65 2 26 139 7 119 8.44e-21 90.1
MS.gene005489.t1 MTR_4g082040 39.623 106 61 2 35 139 105 208 1.22e-20 91.3
MS.gene005489.t1 MTR_7g037260 37.879 132 79 2 27 158 137 265 1.41e-20 90.5
MS.gene005489.t1 MTR_1g057980 40.404 99 58 1 33 131 78 175 1.55e-20 89.4
MS.gene005489.t1 MTR_6g074860 40.566 106 60 2 35 139 4 107 1.70e-20 88.2
MS.gene005489.t1 MTR_7g450950 41.237 97 56 1 35 131 157 252 4.36e-20 88.6
MS.gene005489.t1 MTR_3g077650 39.815 108 62 2 35 141 181 286 6.89e-20 89.0
MS.gene005489.t1 MTR_7g086960 33.333 156 96 5 35 187 89 239 3.31e-19 86.3
MS.gene005489.t1 MTR_7g451170 39.815 108 62 2 35 141 191 296 5.06e-19 86.3
MS.gene005489.t1 MTR_6g027370 35.537 121 75 2 29 148 93 211 7.89e-19 85.5
MS.gene005489.t1 MTR_5g082910 45.263 95 51 1 35 129 19 112 8.58e-19 84.3
MS.gene005489.t1 MTR_7g035350 38.318 107 64 2 25 131 216 320 1.06e-18 85.9
MS.gene005489.t1 MTR_4g088015 34.677 124 80 1 33 156 219 341 2.25e-18 84.7
MS.gene005489.t1 MTR_5g010650 42.105 95 54 1 35 129 110 203 1.20e-17 82.8
MS.gene005489.t1 MTR_5g038910 38.235 102 60 2 38 138 29 128 3.12e-17 81.6
MS.gene005489.t1 MTR_4g063100 64.706 51 18 0 91 141 1 51 3.57e-17 77.8
MS.gene005489.t1 MTR_5g038910 38.235 102 60 2 38 138 29 128 4.74e-17 80.5
MS.gene005489.t1 MTR_8g468380 38.261 115 65 3 38 151 25 134 1.58e-16 79.3
MS.gene005489.t1 MTR_2g096380 62.745 51 19 0 91 141 1 51 2.24e-16 75.5
MS.gene005489.t1 MTR_7g037130 33.333 132 85 2 27 158 137 265 2.15e-15 75.5
MS.gene005489.t1 MTR_0023s0210 42.683 82 47 0 28 109 2 83 2.61e-15 70.1
MS.gene005489.t1 MTR_6g055910 33.582 134 64 7 91 207 2 127 5.78e-11 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene005489.t1 AT2G47190 46.863 271 108 4 26 277 13 266 7.69e-79 240
MS.gene005489.t1 AT3G06490 73.649 148 39 0 19 166 5 152 2.68e-74 230
MS.gene005489.t1 AT1G48000 67.347 147 47 1 33 178 32 178 1.43e-72 223
MS.gene005489.t1 AT5G49620 73.759 141 37 0 28 168 21 161 1.12e-70 220
MS.gene005489.t1 AT1G68320 66.901 142 47 0 33 174 19 160 2.36e-69 216
MS.gene005489.t1 AT5G49620 67.097 155 37 1 28 168 21 175 5.63e-67 211
MS.gene005489.t1 AT1G25340 52.020 198 64 4 34 231 19 185 9.69e-65 204
MS.gene005489.t1 AT1G25340 50.000 198 63 5 34 231 19 180 3.01e-59 190
MS.gene005489.t1 AT1G25340 50.000 198 63 5 34 231 19 180 8.34e-59 190
MS.gene005489.t1 AT3G27810 72.897 107 29 0 33 139 20 126 2.73e-57 183
MS.gene005489.t1 AT5G40350 72.816 103 28 0 33 135 17 119 6.99e-55 177
MS.gene005489.t1 AT3G01530 57.534 146 52 2 11 147 4 148 8.71e-55 176
MS.gene005489.t1 AT3G24310 66.667 105 35 0 34 138 19 123 4.37e-49 164
MS.gene005489.t1 AT4G13480 66.355 107 36 0 32 138 5 111 6.06e-49 163
MS.gene005489.t1 AT5G59780 63.889 108 39 0 34 141 9 116 4.10e-48 160
MS.gene005489.t1 AT3G46130 61.607 112 43 0 34 145 10 121 6.75e-48 160
MS.gene005489.t1 AT3G30210 64.762 105 37 0 34 138 28 132 9.02e-47 158
MS.gene005489.t1 AT5G14750 60.000 115 46 0 22 136 5 119 5.00e-45 151
MS.gene005489.t1 AT5G40330 43.137 204 86 4 34 229 13 194 1.06e-44 150
MS.gene005489.t1 AT2G32460 54.098 122 56 0 17 138 2 123 6.15e-43 153
MS.gene005489.t1 AT5G16770 52.273 132 61 2 33 162 12 143 3.37e-42 147
MS.gene005489.t1 AT5G16770 52.273 132 61 2 33 162 12 143 3.37e-42 147
MS.gene005489.t1 AT2G32460 59.434 106 43 0 33 138 6 111 4.01e-42 150
MS.gene005489.t1 AT5G16770 52.273 132 61 2 33 162 12 143 6.01e-42 147
MS.gene005489.t1 AT5G16770 52.273 132 61 2 33 162 12 143 6.01e-42 147
MS.gene005489.t1 AT3G02940 53.279 122 57 0 29 150 8 129 6.84e-42 146
MS.gene005489.t1 AT3G27920 63.107 103 38 0 34 136 15 117 9.15e-42 143
MS.gene005489.t1 AT3G11440 56.075 107 47 0 32 138 40 146 1.13e-41 149
MS.gene005489.t1 AT3G02940 53.279 122 57 0 29 150 8 129 1.47e-41 145
MS.gene005489.t1 AT3G02940 53.279 122 57 0 29 150 8 129 1.47e-41 145
MS.gene005489.t1 AT5G52600 57.658 111 47 0 27 137 6 116 1.90e-41 142
MS.gene005489.t1 AT5G54230 55.856 111 49 0 33 143 12 122 1.96e-41 145
MS.gene005489.t1 AT4G12350 50.833 120 59 0 29 148 8 127 2.48e-41 144
MS.gene005489.t1 AT1G06180 52.500 120 57 0 33 152 12 131 2.87e-41 143
MS.gene005489.t1 AT1G22640 54.701 117 53 0 33 149 12 128 3.13e-41 143
MS.gene005489.t1 AT4G21440 43.558 163 81 2 33 186 12 172 3.52e-41 145
MS.gene005489.t1 AT4G05100 54.054 111 51 0 33 143 13 123 5.02e-41 144
MS.gene005489.t1 AT2G31180 56.481 108 47 0 29 136 8 115 5.24e-41 142
MS.gene005489.t1 AT3G11440 56.075 107 47 0 32 138 40 146 5.73e-41 149
MS.gene005489.t1 AT3G11440 56.075 107 47 0 32 138 40 146 5.73e-41 149
MS.gene005489.t1 AT3G11440 56.075 107 47 0 32 138 40 146 5.73e-41 149
MS.gene005489.t1 AT5G55020 54.701 117 53 0 23 139 16 132 8.56e-41 148
MS.gene005489.t1 AT4G26930 58.716 109 45 0 31 139 17 125 9.00e-41 145
MS.gene005489.t1 AT5G65230 50.820 122 60 0 29 150 8 129 9.42e-41 143
MS.gene005489.t1 AT4G34990 61.765 102 39 0 35 136 14 115 9.58e-41 142
MS.gene005489.t1 AT1G66230 54.783 115 52 0 29 143 8 122 1.15e-40 142
MS.gene005489.t1 AT5G06100 54.545 110 50 0 29 138 28 137 1.16e-40 146
MS.gene005489.t1 AT5G10280 53.390 118 55 0 33 150 12 129 1.25e-40 144
MS.gene005489.t1 AT5G15310 54.783 115 52 0 29 143 8 122 2.43e-40 140
MS.gene005489.t1 AT5G15310 50.394 127 63 0 29 155 8 134 2.61e-40 142
MS.gene005489.t1 AT3G23250 37.879 198 101 2 29 226 8 183 2.83e-40 141
MS.gene005489.t1 AT5G15310 50.394 127 63 0 29 155 8 134 2.98e-40 142
MS.gene005489.t1 AT4G28110 55.769 104 46 0 33 136 12 115 3.69e-40 141
MS.gene005489.t1 AT5G06100 54.545 110 50 0 29 138 28 137 4.84e-40 145
MS.gene005489.t1 AT5G06100 54.545 110 50 0 29 138 28 137 4.84e-40 145
MS.gene005489.t1 AT5G06100 54.545 110 50 0 29 138 28 137 4.84e-40 145
MS.gene005489.t1 AT5G06100 54.545 110 50 0 29 138 28 137 4.84e-40 145
MS.gene005489.t1 AT3G13540 53.279 122 57 0 31 152 21 142 6.59e-40 139
MS.gene005489.t1 AT3G01140 51.220 123 60 0 29 151 8 130 7.12e-40 142
MS.gene005489.t1 AT3G53200 53.982 113 50 1 24 136 2 112 8.77e-40 139
MS.gene005489.t1 AT3G47600 53.846 117 52 1 29 143 8 124 8.92e-40 141
MS.gene005489.t1 AT1G34670 45.638 149 80 1 33 181 12 159 8.93e-40 142
MS.gene005489.t1 AT4G22680 50.000 120 60 0 29 148 8 127 1.08e-39 139
MS.gene005489.t1 AT3G01140 51.220 123 60 0 29 151 51 173 2.37e-39 141
MS.gene005489.t1 AT2G26960 49.612 129 61 2 26 151 10 137 3.63e-39 142
MS.gene005489.t1 AT5G26660 45.139 144 79 0 33 176 12 155 5.38e-39 140
MS.gene005489.t1 AT3G61250 49.167 120 61 0 29 148 8 127 5.63e-39 138
MS.gene005489.t1 AT2G16720 58.654 104 43 0 33 136 12 115 6.65e-39 137
MS.gene005489.t1 AT3G27810 77.027 74 17 0 66 139 4 77 6.66e-39 134
MS.gene005489.t1 AT4G38620 58.824 102 42 0 35 136 14 115 8.68e-39 137
MS.gene005489.t1 AT1G79180 54.054 111 51 0 29 139 10 120 9.06e-39 137
MS.gene005489.t1 AT3G13890 54.808 104 47 0 33 136 12 115 1.01e-38 139
MS.gene005489.t1 AT1G57560 54.054 111 51 0 33 143 12 122 1.23e-38 137
MS.gene005489.t1 AT1G57560 54.054 111 51 0 33 143 12 122 1.24e-38 138
MS.gene005489.t1 AT4G17785 52.542 118 56 0 33 150 13 130 1.77e-38 138
MS.gene005489.t1 AT1G09540 50.862 116 57 0 33 148 12 127 1.82e-38 139
MS.gene005489.t1 AT4G17785 52.542 118 56 0 33 150 13 130 2.30e-38 138
MS.gene005489.t1 AT5G16600 52.174 115 55 0 29 143 8 122 2.66e-38 137
MS.gene005489.t1 AT2G47460 59.615 104 42 0 33 136 12 115 2.74e-38 138
MS.gene005489.t1 AT1G35515 56.731 104 45 0 33 136 12 115 2.78e-38 134
MS.gene005489.t1 AT5G12870 54.630 108 49 0 33 140 18 125 3.62e-38 135
MS.gene005489.t1 AT4G37780 56.881 109 46 1 29 136 8 116 3.87e-38 136
MS.gene005489.t1 AT1G08810 52.101 119 57 0 29 147 8 126 5.14e-38 135
MS.gene005489.t1 AT5G62470 54.630 108 49 0 33 140 12 119 8.44e-38 136
MS.gene005489.t1 AT5G35550 48.889 135 58 3 21 147 5 136 1.12e-37 134
MS.gene005489.t1 AT5G60890 45.255 137 74 1 33 168 12 148 1.18e-37 135
MS.gene005489.t1 AT4G09460 57.843 102 43 0 35 136 14 115 1.41e-37 133
MS.gene005489.t1 AT1G16490 51.852 108 52 0 29 136 10 117 1.77e-37 134
MS.gene005489.t1 AT1G74650 55.046 109 49 0 33 141 12 120 1.87e-37 135
MS.gene005489.t1 AT5G14340 50.833 120 59 0 29 148 20 139 2.85e-37 133
MS.gene005489.t1 AT3G62610 57.692 104 44 0 33 136 12 115 3.65e-37 134
MS.gene005489.t1 AT5G40350 78.571 70 15 0 66 135 5 74 7.04e-37 129
MS.gene005489.t1 AT1G63910 54.206 107 49 0 33 139 12 118 8.49e-37 134
MS.gene005489.t1 AT5G07690 54.369 103 47 0 33 135 12 114 8.76e-37 133
MS.gene005489.t1 AT5G62320 47.692 130 61 1 29 151 9 138 9.48e-37 131
MS.gene005489.t1 AT1G18570 56.731 104 45 0 33 136 13 116 1.15e-36 134
MS.gene005489.t1 AT3G12720 50.962 104 51 0 33 136 22 125 1.15e-36 132
MS.gene005489.t1 AT3G28910 52.174 115 55 0 29 143 8 122 1.55e-36 132
MS.gene005489.t1 AT4G01680 54.717 106 48 0 33 138 12 117 2.18e-36 130
MS.gene005489.t1 AT5G49330 54.630 108 49 0 29 136 8 115 2.98e-36 132
MS.gene005489.t1 AT5G07700 52.885 104 49 0 33 136 12 115 3.85e-36 132
MS.gene005489.t1 AT5G07700 52.885 104 49 0 33 136 12 115 3.85e-36 132
MS.gene005489.t1 AT5G61420 43.151 146 80 1 33 178 12 154 4.06e-36 132
MS.gene005489.t1 AT1G56160 51.852 108 52 0 29 136 10 117 5.71e-36 130
MS.gene005489.t1 AT4G01680 54.717 106 48 0 33 138 12 117 5.74e-36 131
MS.gene005489.t1 AT5G62470 54.630 108 48 1 33 140 12 118 8.31e-36 131
MS.gene005489.t1 AT3G13890 50.442 113 47 1 33 136 12 124 1.06e-35 131
MS.gene005489.t1 AT3G08500 53.774 106 49 0 33 138 30 135 1.51e-35 130
MS.gene005489.t1 AT3G28470 53.398 103 48 0 29 131 8 110 1.74e-35 129
MS.gene005489.t1 AT3G12820 50.926 108 53 0 29 136 10 117 5.20e-35 126
MS.gene005489.t1 AT5G57620 50.833 120 58 1 29 147 8 127 6.61e-35 128
MS.gene005489.t1 AT1G74080 54.369 103 47 0 33 135 12 114 8.24e-35 128
MS.gene005489.t1 AT5G56110 50.450 111 55 0 33 143 12 122 2.07e-34 127
MS.gene005489.t1 AT3G49690 54.128 109 49 1 29 136 8 116 2.33e-34 126
MS.gene005489.t1 AT5G23000 51.376 109 52 1 29 136 8 116 2.78e-34 127
MS.gene005489.t1 AT1G74430 48.276 116 60 0 33 148 12 127 3.15e-34 125
MS.gene005489.t1 AT3G46130 66.667 81 27 0 65 145 9 89 8.22e-34 123
MS.gene005489.t1 AT5G65790 53.211 109 50 1 29 136 8 116 1.33e-33 126
MS.gene005489.t1 AT5G52260 50.000 116 54 1 34 145 13 128 2.91e-33 122
MS.gene005489.t1 AT3G48920 51.961 102 49 0 34 135 19 120 3.85e-33 122
MS.gene005489.t1 AT5G59780 68.421 76 24 0 66 141 20 95 4.17e-33 120
MS.gene005489.t1 AT3G46130 66.250 80 27 0 66 145 20 99 4.29e-33 121
MS.gene005489.t1 AT4G01680 49.153 118 48 1 33 138 12 129 1.43e-32 122
MS.gene005489.t1 AT4G25560 51.456 103 50 0 34 136 11 113 1.72e-32 121
MS.gene005489.t1 AT2G36890 51.376 109 52 1 29 136 8 116 1.85e-32 121
MS.gene005489.t1 AT3G60460 49.541 109 54 1 33 140 11 119 2.21e-32 121
MS.gene005489.t1 AT1G79180 41.667 144 51 1 29 139 10 153 3.41e-32 121
MS.gene005489.t1 AT2G36890 51.376 109 52 1 29 136 49 157 3.47e-32 121
MS.gene005489.t1 AT1G18710 50.962 104 51 0 33 136 12 115 8.01e-31 116
MS.gene005489.t1 AT1G66370 49.091 110 56 0 33 142 8 117 8.42e-31 115
MS.gene005489.t1 AT3G53200 64.789 71 25 0 66 136 9 79 9.49e-29 109
MS.gene005489.t1 AT1G56650 38.953 172 94 4 33 204 8 168 1.53e-28 109
MS.gene005489.t1 AT2G26950 44.231 104 58 0 32 135 15 118 2.41e-28 112
MS.gene005489.t1 AT1G66380 50.962 104 51 0 33 136 8 111 5.02e-28 105
MS.gene005489.t1 AT1G66390 50.962 104 51 0 33 136 8 111 1.27e-26 104
MS.gene005489.t1 AT5G26660 45.045 111 61 0 66 176 14 124 2.41e-26 105
MS.gene005489.t1 AT5G35550 54.737 95 35 2 61 147 45 139 4.55e-26 103
MS.gene005489.t1 AT5G14750 64.706 68 24 0 69 136 18 85 6.71e-26 100
MS.gene005489.t1 AT4G37260 34.239 184 115 4 35 216 13 192 1.85e-24 100
MS.gene005489.t1 AT3G12820 61.765 68 26 0 69 136 2 69 3.15e-24 97.1
MS.gene005489.t1 AT3G47600 55.000 80 34 1 66 143 39 118 4.23e-24 99.8
MS.gene005489.t1 AT3G27785 37.405 131 74 2 33 156 187 316 6.18e-24 100
MS.gene005489.t1 AT5G02320 43.137 102 57 1 35 136 127 227 1.71e-23 100
MS.gene005489.t1 AT5G02320 43.137 102 57 1 35 136 127 227 1.71e-23 100
MS.gene005489.t1 AT1G69560 36.735 147 83 4 12 153 80 221 1.83e-23 97.8
MS.gene005489.t1 AT1G69560 36.842 133 77 3 12 139 96 226 2.40e-23 97.8
MS.gene005489.t1 AT5G02320 43.137 102 57 1 35 136 67 167 2.44e-23 99.4
MS.gene005489.t1 AT3G29020 41.593 113 65 1 27 139 57 168 3.88e-23 95.1
MS.gene005489.t1 AT2G23290 45.098 102 55 1 35 136 13 113 6.36e-23 96.3
MS.gene005489.t1 AT3G29020 41.593 113 65 1 27 139 59 170 8.99e-23 95.5
MS.gene005489.t1 AT3G09230 50.526 95 46 1 35 129 55 148 1.13e-22 96.7
MS.gene005489.t1 AT3G09370 42.718 103 58 1 35 137 135 236 1.59e-22 97.1
MS.gene005489.t1 AT3G09370 42.718 103 58 1 35 137 143 244 1.73e-22 97.1
MS.gene005489.t1 AT3G09370 42.718 103 58 1 35 137 130 231 1.74e-22 97.1
MS.gene005489.t1 AT5G11510 41.176 102 59 1 35 136 81 181 2.38e-22 97.1
MS.gene005489.t1 AT5G11510 41.176 102 59 1 35 136 81 181 2.38e-22 97.1
MS.gene005489.t1 AT5G11510 41.176 102 59 1 35 136 81 181 2.38e-22 97.1
MS.gene005489.t1 AT5G11510 41.176 102 59 1 35 136 81 181 2.52e-22 97.1
MS.gene005489.t1 AT4G18770 38.462 117 69 2 26 142 210 323 2.70e-22 95.9
MS.gene005489.t1 AT5G11510 41.176 102 59 1 35 136 81 181 2.82e-22 96.7
MS.gene005489.t1 AT1G26780 39.450 109 63 2 32 139 95 201 6.89e-22 92.8
MS.gene005489.t1 AT1G17950 42.727 110 60 2 31 139 1 108 7.93e-22 92.0
MS.gene005489.t1 AT1G26780 39.450 109 63 2 32 139 95 201 1.03e-21 93.6
MS.gene005489.t1 AT2G39880 42.453 106 58 2 35 139 50 153 2.16e-21 92.8
MS.gene005489.t1 AT5G40360 40.816 98 57 1 32 129 155 251 2.33e-21 92.4
MS.gene005489.t1 AT3G55730 42.991 107 58 2 35 140 56 160 3.16e-21 92.8
MS.gene005489.t1 AT1G73410 41.818 110 61 2 31 139 2 109 3.37e-21 90.1
MS.gene005489.t1 AT1G73410 43.396 106 57 2 35 139 6 109 5.11e-21 88.6
MS.gene005489.t1 AT5G17800 38.739 111 67 1 29 139 87 196 7.46e-21 90.5
MS.gene005489.t1 AT5G11050 33.951 162 97 4 33 187 103 261 1.63e-20 90.9
MS.gene005489.t1 AT5G58850 39.815 108 62 2 35 141 105 210 1.95e-20 90.5
MS.gene005489.t1 AT4G32730 37.864 103 61 2 35 136 87 187 5.44e-20 90.1
MS.gene005489.t1 AT4G32730 37.864 103 61 2 35 136 87 187 5.44e-20 90.1
MS.gene005489.t1 AT4G32730 37.864 103 61 2 35 136 87 187 5.44e-20 90.1
MS.gene005489.t1 AT4G32730 37.864 103 61 2 35 136 87 187 5.44e-20 90.1
MS.gene005489.t1 AT4G32730 37.864 103 61 2 35 136 87 187 5.56e-20 90.1
MS.gene005489.t1 AT2G25230 42.424 99 56 1 33 131 24 121 6.53e-20 86.3
MS.gene005489.t1 AT4G33450 36.508 126 79 1 34 159 18 142 8.80e-20 86.3
MS.gene005489.t1 AT3G50060 43.158 95 53 1 35 129 6 99 1.08e-19 87.0
MS.gene005489.t1 AT5G67300 41.176 102 59 1 35 136 6 106 1.54e-19 86.7
MS.gene005489.t1 AT1G22640 53.521 71 33 0 79 149 1 71 2.43e-19 84.0
MS.gene005489.t1 AT2G37630 39.623 106 62 1 38 141 7 112 5.07e-19 86.3
MS.gene005489.t1 AT5G14750 60.345 58 23 0 79 136 1 58 8.56e-19 81.3
MS.gene005489.t1 AT5G14750 60.345 58 23 0 79 136 1 58 8.56e-19 81.3
MS.gene005489.t1 AT3G23250 33.784 148 76 2 79 226 1 126 8.91e-19 83.2
MS.gene005489.t1 AT5G59780 66.667 51 17 0 91 141 1 51 2.74e-18 80.5
MS.gene005489.t1 AT3G46130 63.636 55 20 0 91 145 1 55 3.00e-18 80.9
MS.gene005489.t1 AT1G66380 57.746 71 30 0 66 136 8 78 3.92e-18 78.2
MS.gene005489.t1 AT1G18960 33.945 109 69 2 35 143 10 115 5.40e-17 79.7
MS.gene005489.t1 AT5G40430 42.000 100 54 3 33 131 52 148 1.06e-16 78.2
MS.gene005489.t1 AT1G71030 44.872 78 43 0 72 149 5 82 1.54e-16 76.3
MS.gene005489.t1 AT1G71030 44.872 78 43 0 72 149 19 96 1.96e-16 76.3
MS.gene005489.t1 AT1G14350 34.677 124 72 4 38 158 28 145 2.58e-16 79.0
MS.gene005489.t1 AT1G14350 34.677 124 72 4 38 158 28 145 2.58e-16 79.0
MS.gene005489.t1 AT5G39700 37.719 114 65 3 36 146 57 167 2.98e-16 75.5
MS.gene005489.t1 AT1G66380 47.436 78 41 0 33 110 8 85 4.11e-16 72.8
MS.gene005489.t1 AT4G00540 34.188 117 73 2 33 146 101 216 1.39e-15 76.6
MS.gene005489.t1 AT4G00540 34.188 117 73 2 33 146 99 214 1.94e-15 76.3
MS.gene005489.t1 AT2G02820 34.375 128 71 3 38 157 33 155 3.69e-15 75.5
MS.gene005489.t1 AT2G02820 34.375 128 71 3 38 157 33 155 3.93e-15 74.7
MS.gene005489.t1 AT2G02820 34.375 128 71 3 38 157 33 155 4.10e-15 75.1
MS.gene005489.t1 AT4G25560 56.522 46 20 0 91 136 2 47 2.21e-11 62.4
MS.gene005489.t1 AT3G18100 30.216 139 90 2 19 151 317 454 5.51e-11 63.2
MS.gene005489.t1 AT3G18100 30.216 139 90 2 19 151 482 619 5.89e-11 63.2
MS.gene005489.t1 AT3G18100 30.216 139 90 2 19 151 369 506 6.10e-11 63.2
MS.gene005489.t1 AT3G18100 30.216 139 90 2 19 151 530 667 7.12e-11 63.2

Find 74 sgRNAs with CRISPR-Local

Find 85 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAACGTATCTTACAATTTAA+TGG 0.116751 1.1:+64251119 MS.gene005489:CDS
CATTCCCCTGTTCAAATTCT+TGG 0.154181 1.1:-64251197 None:intergenic
ACTCCTCATTACATGAATAT+TGG 0.195140 1.1:-64250179 None:intergenic
GAACTCCGTCGCTCGCTGTT+CGG 0.248764 1.1:+64250333 MS.gene005489:CDS
CTCCTCATTACATGAATATT+GGG 0.250273 1.1:-64250178 None:intergenic
TTTAATGGATTGTGCGGAAC+TGG 0.299412 1.1:+64251134 MS.gene005489:CDS
GGGACACATTGCGTTTAGTA+TGG 0.307542 1.1:+64250905 MS.gene005489:CDS
AACTCCGTCGCTCGCTGTTC+GGG 0.308012 1.1:+64250334 MS.gene005489:CDS
CAAGAATCAAGACTTGTTCT+TGG 0.312108 1.1:-64250438 None:intergenic
TTTGAACAGGGGAATGGGTT+TGG 0.313015 1.1:+64251204 MS.gene005489:CDS
ATGTAAACAGTCAACAGTTT+AGG 0.327525 1.1:+64250884 MS.gene005489:CDS
ATTTCATTGTCCGTTCTTCC+AGG 0.342412 1.1:-64250808 None:intergenic
ATGTTCCCTCGACGAACATT+TGG 0.371902 1.1:-64250409 None:intergenic
CTACAGTTGCACGAGAAGTA+TGG 0.391300 1.1:-64250951 None:intergenic
TTCATTCCCGTTGGGGCAAT+CGG 0.393266 1.1:+64250464 MS.gene005489:CDS
AAGAATTTGAACAGGGGAAT+GGG 0.400055 1.1:+64251199 MS.gene005489:CDS
ATATTTCTTGCAGCAACAAT+TGG 0.401940 1.1:+64251257 MS.gene005489:CDS
ACAATGAAATAAAGAACTAT+TGG 0.404212 1.1:+64250821 MS.gene005489:CDS
TTCTTGATCTTCATTCCCGT+TGG 0.406689 1.1:+64250455 MS.gene005489:CDS
GAGGTTTCATCGTACTCGTC+AGG 0.407012 1.1:+64251075 MS.gene005489:CDS
TGTAAGTCAAGAAGATACTA+TGG 0.408576 1.1:+64250231 MS.gene005489:CDS
CACGTACCGATTGCCCCAAC+GGG 0.411030 1.1:-64250470 None:intergenic
TCTTGATCTTCATTCCCGTT+GGG 0.419228 1.1:+64250456 MS.gene005489:CDS
AAACATCCAAGAATTTGAAC+AGG 0.422533 1.1:+64251191 MS.gene005489:CDS
TGTAAACAGTCAACAGTTTA+GGG 0.435530 1.1:+64250885 MS.gene005489:CDS
GGTGATTTGTCCATGGCTAT+AGG 0.437674 1.1:-64250983 None:intergenic
CAAGAATTTGAACAGGGGAA+TGG 0.449554 1.1:+64251198 MS.gene005489:CDS
CAAGAGTGGTGAAGCAAGCT+AGG 0.457237 1.1:+64250848 MS.gene005489:CDS
TGTTCGGGTCTAAAGAGAAC+CGG 0.457348 1.1:+64250349 MS.gene005489:CDS
CAGTCCACGGAGATGGTCAC+TGG 0.481786 1.1:+64250311 MS.gene005489:CDS
GAACAGGGGAATGGGTTTGG+TGG 0.482969 1.1:+64251207 MS.gene005489:CDS
AAAATAGCGGAACAATTGCC+TGG 0.485517 1.1:+64250790 MS.gene005489:CDS
GAAACCTCAGACTGCAACAT+AGG 0.488032 1.1:-64251060 None:intergenic
CTTGATCTTCATTCCCGTTG+GGG 0.504304 1.1:+64250457 MS.gene005489:CDS
AGGTTTCATCGTACTCGTCA+GGG 0.510012 1.1:+64251076 MS.gene005489:CDS
GATACTATGGTGATAAAGAA+AGG 0.514524 1.1:+64250244 MS.gene005489:CDS
ACACGTACCGATTGCCCCAA+CGG 0.518769 1.1:-64250471 None:intergenic
TCCTCCTATGTTGCAGTCTG+AGG 0.519443 1.1:+64251056 MS.gene005489:CDS
AAGCTCATAGTGAAACTTGT+GGG 0.520297 1.1:+64251022 MS.gene005489:CDS
GGTTTGGTGGTTCAGAATTG+TGG 0.520334 1.1:+64251220 MS.gene005489:CDS
TGGGATCCACGTGGCAGGAG+TGG 0.526257 1.1:+64251154 MS.gene005489:CDS
GTATCCTCCTCTTCTGTCCA+TGG 0.531773 1.1:-64250268 None:intergenic
GGAACTGGGATCCACGTGGC+AGG 0.533686 1.1:+64251149 MS.gene005489:CDS
AACCCAATATTCATGTAATG+AGG 0.550465 1.1:+64250176 MS.gene005489:CDS
TGCAAGTGGTGATTTGTCCA+TGG 0.550515 1.1:-64250990 None:intergenic
TTAATGGATTGTGCGGAACT+GGG 0.572101 1.1:+64251135 MS.gene005489:CDS
GGAAAAGCTGCAGATTAAGA+TGG 0.575213 1.1:+64250371 MS.gene005489:CDS
ATGAACTATGTGGCAGTCCA+CGG 0.575770 1.1:+64250298 MS.gene005489:CDS
GATACTAATTCCTATAGCCA+TGG 0.576856 1.1:+64250973 MS.gene005489:CDS
AGCTTTAGTATTGTTGCAAG+TGG 0.579565 1.1:-64251004 None:intergenic
GGAACAATTGCCTGGAAGAA+CGG 0.586616 1.1:+64250798 MS.gene005489:CDS
TTACAATTTAATGGATTGTG+CGG 0.586971 1.1:+64251128 MS.gene005489:CDS
ACCTCAGACTGCAACATAGG+AGG 0.590116 1.1:-64251057 None:intergenic
TATGTGGCAGTCCACGGAGA+TGG 0.598972 1.1:+64250304 MS.gene005489:CDS
AGGTCCATGGACAGAAGAGG+AGG 0.600682 1.1:+64250264 MS.gene005489:CDS
TGGTGATAAAGAAAGGTCCA+TGG 0.601432 1.1:+64250251 MS.gene005489:CDS
GTTCGGGTCTAAAGAGAACC+GGG 0.612268 1.1:+64250350 MS.gene005489:CDS
AAAGCTCATAGTGAAACTTG+TGG 0.615117 1.1:+64251021 MS.gene005489:CDS
TACGTCCAAATGTTCGTCGA+GGG 0.619358 1.1:+64250404 MS.gene005489:CDS
GAAAGGTCCATGGACAGAAG+AGG 0.623514 1.1:+64250261 MS.gene005489:CDS
ATGAAGGTGGTCTAAAATAG+CGG 0.627439 1.1:+64250777 MS.gene005489:intron
AACATCCAAGAATTTGAACA+GGG 0.633519 1.1:+64251192 MS.gene005489:CDS
GAACTATTGGAGAACAAGAG+TGG 0.634570 1.1:+64250834 MS.gene005489:CDS
TGGATTCTCTCAATGAGGCG+TGG 0.634598 1.1:-64250931 None:intergenic
GGTTTCATCGTACTCGTCAG+GGG 0.645588 1.1:+64251077 MS.gene005489:CDS
AGCTCATAGTGAAACTTGTG+GGG 0.647510 1.1:+64251023 MS.gene005489:CDS
TAGACCCGAACAGCGAGCGA+CGG 0.654403 1.1:-64250338 None:intergenic
TACTATTCTGATGAACTATG+TGG 0.655766 1.1:+64250288 MS.gene005489:CDS
TTACGTCCAAATGTTCGTCG+AGG 0.668070 1.1:+64250403 MS.gene005489:CDS
AAGTATGGATTCTCTCAATG+AGG 0.675474 1.1:-64250936 None:intergenic
GCAGTTCCACTCCTGCCACG+TGG 0.694164 1.1:-64251160 None:intergenic
AGTTCCAGTGACCATCTCCG+TGG 0.715119 1.1:-64250315 None:intergenic
ACATCCAAGAATTTGAACAG+GGG 0.717409 1.1:+64251193 MS.gene005489:CDS
GTGCGGAACTGGGATCCACG+TGG 0.728567 1.1:+64251145 MS.gene005489:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAATTGGTTAATTTATATTA+AGG + chr1.1:64250516-64250535 MS.gene005489:intron 10.0%
!! ACAATGAAATAAAGAACTAT+TGG + chr1.1:64250821-64250840 MS.gene005489:CDS 20.0%
!!! GATATTCTGTTATTTAATGA+AGG + chr1.1:64250761-64250780 MS.gene005489:intron 20.0%
!!! GTTTTTTTTTAGAGAAAACA+AGG - chr1.1:64250694-64250713 None:intergenic 20.0%
! ATGCATGTAAACTATGTAAT+TGG + chr1.1:64250500-64250519 MS.gene005489:intron 25.0%
! GAACGTATCTTACAATTTAA+TGG + chr1.1:64251119-64251138 MS.gene005489:CDS 25.0%
!! ATTCTGTTATTTAATGAAGG+TGG + chr1.1:64250764-64250783 MS.gene005489:intron 25.0%
!!! AAACCTTGTTTAGTTTTAGA+AGG + chr1.1:64250710-64250729 MS.gene005489:intron 25.0%
!!! TTACAATTTAATGGATTGTG+CGG + chr1.1:64251128-64251147 MS.gene005489:CDS 25.0%
!!! TTTCCTTCTAAAACTAAACA+AGG - chr1.1:64250716-64250735 None:intergenic 25.0%
AAACATCCAAGAATTTGAAC+AGG + chr1.1:64251191-64251210 MS.gene005489:CDS 30.0%
AACATCCAAGAATTTGAACA+GGG + chr1.1:64251192-64251211 MS.gene005489:CDS 30.0%
AACCCAATATTCATGTAATG+AGG + chr1.1:64250176-64250195 MS.gene005489:CDS 30.0%
ACTCCTCATTACATGAATAT+TGG - chr1.1:64250182-64250201 None:intergenic 30.0%
ATATTTCTTGCAGCAACAAT+TGG + chr1.1:64251257-64251276 MS.gene005489:CDS 30.0%
ATGTAAACAGTCAACAGTTT+AGG + chr1.1:64250884-64250903 MS.gene005489:CDS 30.0%
CTCCTCATTACATGAATATT+GGG - chr1.1:64250181-64250200 None:intergenic 30.0%
GATACTATGGTGATAAAGAA+AGG + chr1.1:64250244-64250263 MS.gene005489:CDS 30.0%
TACTATTCTGATGAACTATG+TGG + chr1.1:64250288-64250307 MS.gene005489:CDS 30.0%
TGTAAACAGTCAACAGTTTA+GGG + chr1.1:64250885-64250904 MS.gene005489:CDS 30.0%
TGTAAGTCAAGAAGATACTA+TGG + chr1.1:64250231-64250250 MS.gene005489:CDS 30.0%
!!! GTTTTAGAAGGAAATAGAGT+TGG + chr1.1:64250722-64250741 MS.gene005489:intron 30.0%
AAACAAGGTTTGTGTGAAAG+AGG - chr1.1:64250679-64250698 None:intergenic 35.0%
AAAGCTCATAGTGAAACTTG+TGG + chr1.1:64251021-64251040 MS.gene005489:CDS 35.0%
AAGAATTTGAACAGGGGAAT+GGG + chr1.1:64251199-64251218 MS.gene005489:CDS 35.0%
AAGCTCATAGTGAAACTTGT+GGG + chr1.1:64251022-64251041 MS.gene005489:CDS 35.0%
AAGTATGGATTCTCTCAATG+AGG - chr1.1:64250939-64250958 None:intergenic 35.0%
ACATCCAAGAATTTGAACAG+GGG + chr1.1:64251193-64251212 MS.gene005489:CDS 35.0%
GATACTAATTCCTATAGCCA+TGG + chr1.1:64250973-64250992 MS.gene005489:CDS 35.0%
! AGCTTTAGTATTGTTGCAAG+TGG - chr1.1:64251007-64251026 None:intergenic 35.0%
! ATGAAGGTGGTCTAAAATAG+CGG + chr1.1:64250777-64250796 MS.gene005489:intron 35.0%
! CAAGAATCAAGACTTGTTCT+TGG - chr1.1:64250441-64250460 None:intergenic 35.0%
!! ATGAGGAGTTTTTCAGATTG+TGG + chr1.1:64250193-64250212 MS.gene005489:CDS 35.0%
AGCTCATAGTGAAACTTGTG+GGG + chr1.1:64251023-64251042 MS.gene005489:CDS 40.0%
ATTTCATTGTCCGTTCTTCC+AGG - chr1.1:64250811-64250830 None:intergenic 40.0%
CAAGAATTTGAACAGGGGAA+TGG + chr1.1:64251198-64251217 MS.gene005489:CDS 40.0%
CATTCCCCTGTTCAAATTCT+TGG - chr1.1:64251200-64251219 None:intergenic 40.0%
GAACTATTGGAGAACAAGAG+TGG + chr1.1:64250834-64250853 MS.gene005489:CDS 40.0%
GGAAAAGCTGCAGATTAAGA+TGG + chr1.1:64250371-64250390 MS.gene005489:CDS 40.0%
TCTTGATCTTCATTCCCGTT+GGG + chr1.1:64250456-64250475 MS.gene005489:CDS 40.0%
TGGTGATAAAGAAAGGTCCA+TGG + chr1.1:64250251-64250270 MS.gene005489:CDS 40.0%
TTCTTGATCTTCATTCCCGT+TGG + chr1.1:64250455-64250474 MS.gene005489:CDS 40.0%
! AAAATAGCGGAACAATTGCC+TGG + chr1.1:64250790-64250809 MS.gene005489:CDS 40.0%
! TCTTAATCTGCAGCTTTTCC+CGG - chr1.1:64250371-64250390 None:intergenic 40.0%
!! TTAATGGATTGTGCGGAACT+GGG + chr1.1:64251135-64251154 MS.gene005489:CDS 40.0%
!! TTTAATGGATTGTGCGGAAC+TGG + chr1.1:64251134-64251153 MS.gene005489:CDS 40.0%
AGGTTTCATCGTACTCGTCA+GGG + chr1.1:64251076-64251095 MS.gene005489:CDS 45.0%
ATGAACTATGTGGCAGTCCA+CGG + chr1.1:64250298-64250317 MS.gene005489:CDS 45.0%
ATGTTCCCTCGACGAACATT+TGG - chr1.1:64250412-64250431 None:intergenic 45.0%
CTACAGTTGCACGAGAAGTA+TGG - chr1.1:64250954-64250973 None:intergenic 45.0%
CTTGATCTTCATTCCCGTTG+GGG + chr1.1:64250457-64250476 MS.gene005489:CDS 45.0%
GAAACCTCAGACTGCAACAT+AGG - chr1.1:64251063-64251082 None:intergenic 45.0%
GGAACAATTGCCTGGAAGAA+CGG + chr1.1:64250798-64250817 MS.gene005489:CDS 45.0%
GGGACACATTGCGTTTAGTA+TGG + chr1.1:64250905-64250924 MS.gene005489:CDS 45.0%
TACGTCCAAATGTTCGTCGA+GGG + chr1.1:64250404-64250423 MS.gene005489:CDS 45.0%
TGTTCGGGTCTAAAGAGAAC+CGG + chr1.1:64250349-64250368 MS.gene005489:CDS 45.0%
TTACGTCCAAATGTTCGTCG+AGG + chr1.1:64250403-64250422 MS.gene005489:CDS 45.0%
! GGTGATTTGTCCATGGCTAT+AGG - chr1.1:64250986-64251005 None:intergenic 45.0%
! TGCAAGTGGTGATTTGTCCA+TGG - chr1.1:64250993-64251012 None:intergenic 45.0%
! TTTGAACAGGGGAATGGGTT+TGG + chr1.1:64251204-64251223 MS.gene005489:CDS 45.0%
!! GGTTTGGTGGTTCAGAATTG+TGG + chr1.1:64251220-64251239 MS.gene005489:CDS 45.0%
ACCTCAGACTGCAACATAGG+AGG - chr1.1:64251060-64251079 None:intergenic 50.0%
CAAGAGTGGTGAAGCAAGCT+AGG + chr1.1:64250848-64250867 MS.gene005489:CDS 50.0%
GAAAGGTCCATGGACAGAAG+AGG + chr1.1:64250261-64250280 MS.gene005489:CDS 50.0%
GAGGTTTCATCGTACTCGTC+AGG + chr1.1:64251075-64251094 MS.gene005489:CDS 50.0%
GGTTTCATCGTACTCGTCAG+GGG + chr1.1:64251077-64251096 MS.gene005489:CDS 50.0%
GTATCCTCCTCTTCTGTCCA+TGG - chr1.1:64250271-64250290 None:intergenic 50.0%
GTTCGGGTCTAAAGAGAACC+GGG + chr1.1:64250350-64250369 MS.gene005489:CDS 50.0%
TCCTCCTATGTTGCAGTCTG+AGG + chr1.1:64251056-64251075 MS.gene005489:CDS 50.0%
TGGATTCTCTCAATGAGGCG+TGG - chr1.1:64250934-64250953 None:intergenic 50.0%
TTCATTCCCGTTGGGGCAAT+CGG + chr1.1:64250464-64250483 MS.gene005489:CDS 50.0%
AGGTCCATGGACAGAAGAGG+AGG + chr1.1:64250264-64250283 MS.gene005489:CDS 55.0%
AGTTCCAGTGACCATCTCCG+TGG - chr1.1:64250318-64250337 None:intergenic 55.0%
TATGTGGCAGTCCACGGAGA+TGG + chr1.1:64250304-64250323 MS.gene005489:CDS 55.0%
! GAACAGGGGAATGGGTTTGG+TGG + chr1.1:64251207-64251226 MS.gene005489:CDS 55.0%
!! ACACGTACCGATTGCCCCAA+CGG - chr1.1:64250474-64250493 None:intergenic 55.0%
AACTCCGTCGCTCGCTGTTC+GGG + chr1.1:64250334-64250353 MS.gene005489:CDS 60.0%
CAGTCCACGGAGATGGTCAC+TGG + chr1.1:64250311-64250330 MS.gene005489:CDS 60.0%
GAACTCCGTCGCTCGCTGTT+CGG + chr1.1:64250333-64250352 MS.gene005489:CDS 60.0%
TAGACCCGAACAGCGAGCGA+CGG - chr1.1:64250341-64250360 None:intergenic 60.0%
!! CACGTACCGATTGCCCCAAC+GGG - chr1.1:64250473-64250492 None:intergenic 60.0%
GCAGTTCCACTCCTGCCACG+TGG - chr1.1:64251163-64251182 None:intergenic 65.0%
GGAACTGGGATCCACGTGGC+AGG + chr1.1:64251149-64251168 MS.gene005489:CDS 65.0%
GTGCGGAACTGGGATCCACG+TGG + chr1.1:64251145-64251164 MS.gene005489:CDS 65.0%
TGGGATCCACGTGGCAGGAG+TGG + chr1.1:64251154-64251173 MS.gene005489:CDS 65.0%


Chromosome Type Strat End Strand Name
chr1.1 gene 64250160 64251293 64250160 ID=MS.gene005489
chr1.1 mRNA 64250160 64251293 64250160 ID=MS.gene005489.t1;Parent=MS.gene005489
chr1.1 exon 64250160 64250485 64250160 ID=MS.gene005489.t1.exon1;Parent=MS.gene005489.t1
chr1.1 CDS 64250160 64250485 64250160 ID=cds.MS.gene005489.t1;Parent=MS.gene005489.t1
chr1.1 exon 64250783 64251293 64250783 ID=MS.gene005489.t1.exon2;Parent=MS.gene005489.t1
chr1.1 CDS 64250783 64251293 64250783 ID=cds.MS.gene005489.t1;Parent=MS.gene005489.t1
Gene Sequence

>MS.gene005489

ATGGATACTAATTACAAACCCAATATTCATGTAATGAGGAGTTTTTCAGATTGTGGTTCATCAGTAACAAATGTAAGTCAAGAAGATACTATGGTGATAAAGAAAGGTCCATGGACAGAAGAGGAGGATACTATTCTGATGAACTATGTGGCAGTCCACGGAGATGGTCACTGGAACTCCGTCGCTCGCTGTTCGGGTCTAAAGAGAACCGGGAAAAGCTGCAGATTAAGATGGTTGAACTACTTACGTCCAAATGTTCGTCGAGGGAACATCACTCTCCAAGAACAAGTCTTGATTCTTGATCTTCATTCCCGTTGGGGCAATCGGTACGTGTATATATATGCATGTAAACTATGTAATTGGTTAATTTATATTAAGGTTGCATTATGATCGTGCACTACAAGAAATAAGACATTAAGCAACGATTAATTTGTTAGCAACATGCATATAGCTCATTTAACTCGTTGTAATAAATTGTTTAATTTCTTTCTATTGTAATATTATAAACATTTTTTTCCTCTTTCACACAAACCTTGTTTTCTCTAAAAAAAAACCTTGTTTAGTTTTAGAAGGAAATAGAGTTGGTCAAATTAACTAACATGATATTCTGTTATTTAATGAAGGTGGTCTAAAATAGCGGAACAATTGCCTGGAAGAACGGACAATGAAATAAAGAACTATTGGAGAACAAGAGTGGTGAAGCAAGCTAGGCAACTAAAATGTGATGTAAACAGTCAACAGTTTAGGGACACATTGCGTTTAGTATGGATTCCACGCCTCATTGAGAGAATCCATACTTCTCGTGCAACTGTAGATACTAATTCCTATAGCCATGGACAAATCACCACTTGCAACAATACTAAAGCTCATAGTGAAACTTGTGGGGCAAATGCAAATCCTCCTATGTTGCAGTCTGAGGTTTCATCGTACTCGTCAGGGGTCGATGTTCAAGTACAATCGAACGTATCTTACAATTTAATGGATTGTGCGGAACTGGGATCCACGTGGCAGGAGTGGAACTGCTTAGACTCAAACATCCAAGAATTTGAACAGGGGAATGGGTTTGGTGGTTCAGAATTGTGGACAGATGAAAACATATATTTCTTGCAGCAACAATTGGCTGATGATTTATGA
Protein sequence

>MS.gene005489.t1

MDTNYKPNIHVMRSFSDCGSSVTNVSQEDTMVIKKGPWTEEEDTILMNYVAVHGDGHWNSVARCSGLKRTGKSCRLRWLNYLRPNVRRGNITLQEQVLILDLHSRWGNRWSKIAEQLPGRTDNEIKNYWRTRVVKQARQLKCDVNSQQFRDTLRLVWIPRLIERIHTSRATVDTNSYSHGQITTCNNTKAHSETCGANANPPMLQSEVSSYSSGVDVQVQSNVSYNLMDCAELGSTWQEWNCLDSNIQEFEQGNGFGGSELWTDENIYFLQQQLADDL