AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene005502

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene005502.t1 MTR_1g086790 89.091 330 28 3 1 327 1 325 0.0 522
MS.gene005502.t1 MTR_7g109800 58.974 312 80 17 27 327 21 295 1.26e-88 268
MS.gene005502.t1 MTR_2g033820 48.243 313 122 10 44 327 71 372 7.82e-57 189
MS.gene005502.t1 MTR_5g043880 47.236 199 70 5 134 323 98 270 2.48e-45 155
MS.gene005502.t1 MTR_4g094588 47.393 211 100 4 114 324 133 332 1.51e-44 155
MS.gene005502.t1 MTR_5g091390 80.769 78 15 0 146 223 143 220 3.14e-41 146
MS.gene005502.t1 MTR_4g122530 39.738 229 73 7 144 319 192 408 6.35e-39 142
MS.gene005502.t1 MTR_7g079010 48.387 155 62 4 67 217 58 198 8.80e-35 126
MS.gene005502.t1 MTR_3g104750 66.667 78 26 0 141 218 85 162 1.04e-31 117
MS.gene005502.t1 MTR_7g028415 71.429 70 20 0 148 217 81 150 5.15e-31 115
MS.gene005502.t1 MTR_7g028710 71.429 70 20 0 148 217 81 150 5.15e-31 115
MS.gene005502.t1 MTR_3g095080 68.493 73 23 0 144 216 128 200 6.48e-31 116
MS.gene005502.t1 MTR_3g095080 68.493 73 23 0 144 216 152 224 6.97e-31 117
MS.gene005502.t1 MTR_1g015140 56.522 92 40 0 127 218 69 160 1.19e-30 114
MS.gene005502.t1 MTR_5g042920 47.541 122 58 2 101 219 261 379 2.59e-30 119
MS.gene005502.t1 MTR_5g042920 58.065 62 23 2 160 219 151 211 6.88e-16 78.6
MS.gene005502.t1 MTR_8g007270 62.651 83 31 0 134 216 128 210 5.23e-30 114
MS.gene005502.t1 MTR_4g082580 46.565 131 55 2 104 219 207 337 1.57e-29 116
MS.gene005502.t1 MTR_4g082580 53.125 64 30 0 160 223 145 208 1.78e-16 79.7
MS.gene005502.t1 MTR_7g011820 61.728 81 31 0 145 225 395 475 1.88e-29 118
MS.gene005502.t1 MTR_7g011820 46.809 94 34 2 145 223 198 290 2.23e-17 83.2
MS.gene005502.t1 MTR_8g092140 67.568 74 23 1 144 216 143 216 3.49e-29 112
MS.gene005502.t1 MTR_3g056100 51.887 106 50 1 115 220 214 318 7.77e-29 115
MS.gene005502.t1 MTR_3g056100 55.072 69 30 1 160 228 99 166 9.34e-17 80.9
MS.gene005502.t1 MTR_3g056100 51.887 106 50 1 115 220 227 331 1.04e-28 115
MS.gene005502.t1 MTR_3g056100 55.072 69 30 1 160 228 99 166 9.85e-17 80.9
MS.gene005502.t1 MTR_3g056100 51.887 106 50 1 115 220 358 462 1.64e-28 115
MS.gene005502.t1 MTR_3g056100 56.522 69 28 2 160 228 243 309 1.28e-16 80.9
MS.gene005502.t1 MTR_3g056100 51.887 106 50 1 115 220 371 475 1.84e-28 115
MS.gene005502.t1 MTR_3g056100 56.522 69 28 2 160 228 243 309 1.23e-16 80.9
MS.gene005502.t1 MTR_5g094430 56.977 86 37 0 140 225 210 295 4.20e-28 113
MS.gene005502.t1 MTR_5g094430 50.000 84 41 1 145 228 51 133 6.72e-17 81.3
MS.gene005502.t1 MTR_5g094430 56.977 86 37 0 140 225 232 317 5.85e-28 113
MS.gene005502.t1 MTR_5g094430 57.353 68 28 1 161 228 89 155 7.19e-17 81.3
MS.gene005502.t1 MTR_3g009470 50.459 109 53 1 117 225 453 560 1.05e-27 114
MS.gene005502.t1 MTR_3g009470 37.410 139 83 2 97 232 214 351 9.35e-19 87.4
MS.gene005502.t1 MTR_5g094430 56.977 86 37 0 140 225 344 429 1.14e-27 113
MS.gene005502.t1 MTR_5g094430 50.000 84 41 1 145 228 185 267 1.08e-16 81.3
MS.gene005502.t1 MTR_3g095040 44.737 114 59 1 113 222 67 180 6.03e-27 105
MS.gene005502.t1 MTR_1g077780 45.918 98 53 0 144 241 46 143 1.55e-26 102
MS.gene005502.t1 MTR_8g092010 42.857 112 64 0 111 222 59 170 1.68e-26 103
MS.gene005502.t1 MTR_3g031220 53.846 91 42 0 144 234 349 439 2.91e-26 108
MS.gene005502.t1 MTR_3g031220 44.444 81 40 2 143 223 185 260 2.71e-15 76.6
MS.gene005502.t1 MTR_7g100510 47.115 104 55 0 116 219 317 420 5.95e-26 107
MS.gene005502.t1 MTR_7g100510 46.341 82 38 2 161 242 190 265 4.78e-16 79.0
MS.gene005502.t1 MTR_8g096730 46.875 96 45 1 128 217 32 127 6.44e-26 101
MS.gene005502.t1 MTR_7g071120 48.485 99 43 1 144 234 308 406 8.43e-26 107
MS.gene005502.t1 MTR_7g071120 56.250 64 27 1 160 223 166 228 1.45e-16 80.5
MS.gene005502.t1 MTR_4g130900 34.810 158 88 1 103 245 302 459 3.18e-25 105
MS.gene005502.t1 MTR_5g074400 46.429 112 56 1 118 225 374 485 3.70e-25 106
MS.gene005502.t1 MTR_5g074400 55.000 60 26 1 160 219 243 301 1.57e-14 74.7
MS.gene005502.t1 MTR_7g080020 47.573 103 53 1 119 220 451 553 4.34e-25 106
MS.gene005502.t1 MTR_7g080020 59.375 64 25 1 160 223 280 342 1.64e-17 84.0
MS.gene005502.t1 MTR_7g080000 44.737 114 58 2 109 220 382 492 7.98e-25 105
MS.gene005502.t1 MTR_7g080000 55.385 65 28 1 159 223 233 296 1.03e-16 81.3
MS.gene005502.t1 MTR_4g013260 57.895 76 32 0 144 219 320 395 1.11e-24 104
MS.gene005502.t1 MTR_4g013260 54.688 64 29 0 160 223 184 247 1.11e-17 84.0
MS.gene005502.t1 MTR_2g105060 54.545 77 32 2 147 220 79 155 2.96e-22 94.0
MS.gene005502.t1 MTR_3g053330 32.335 167 97 4 103 256 182 345 3.59e-22 97.1
MS.gene005502.t1 MTR_2g105060 54.545 77 32 2 147 220 154 230 6.05e-22 94.7
MS.gene005502.t1 MTR_7g062220 66.667 57 19 0 160 216 124 180 6.58e-22 94.4
MS.gene005502.t1 MTR_2g088000 40.517 116 65 2 144 258 333 445 1.12e-21 95.9
MS.gene005502.t1 MTR_4g132430 51.948 77 36 1 144 219 111 187 1.53e-21 94.0
MS.gene005502.t1 MTR_4g132430 51.948 77 36 1 144 219 245 321 2.79e-21 94.7
MS.gene005502.t1 MTR_2g023930 51.948 77 36 1 144 219 289 365 7.67e-21 93.6
MS.gene005502.t1 MTR_6g086555 46.835 79 41 1 146 223 192 270 1.17e-20 92.0
MS.gene005502.t1 MTR_7g110720 40.000 115 64 2 106 219 166 276 1.74e-20 92.0
MS.gene005502.t1 MTR_7g110720 40.952 105 61 1 116 219 145 249 2.18e-20 91.3
MS.gene005502.t1 MTR_5g097490 55.263 76 34 0 145 220 237 312 2.47e-20 90.9
MS.gene005502.t1 MTR_5g097490 40.909 110 58 4 160 265 92 198 1.76e-13 70.9
MS.gene005502.t1 MTR_4g094412 50.649 77 37 1 144 219 218 294 5.90e-20 90.5
MS.gene005502.t1 MTR_4g094412 50.649 77 37 1 144 219 227 303 6.20e-20 90.5
MS.gene005502.t1 MTR_2g032030 33.987 153 85 6 91 228 184 335 1.01e-19 89.7
MS.gene005502.t1 MTR_2g032030 55.072 69 29 2 161 228 268 335 1.18e-19 89.7
MS.gene005502.t1 MTR_7g109600 52.055 73 34 1 161 232 54 126 2.07e-19 86.7
MS.gene005502.t1 MTR_4g007060 56.452 62 26 1 159 219 127 188 2.55e-19 86.7
MS.gene005502.t1 MTR_8g098945 50.704 71 33 2 159 228 128 197 2.64e-19 86.7
MS.gene005502.t1 MTR_1g013760 40.594 101 55 2 148 243 124 224 3.26e-19 86.3
MS.gene005502.t1 MTR_8g028565 52.174 69 31 2 161 228 156 223 3.81e-19 87.0
MS.gene005502.t1 MTR_4g007060 56.452 62 26 1 159 219 161 222 3.95e-19 86.7
MS.gene005502.t1 MTR_4g107970 39.831 118 66 3 107 219 121 238 4.80e-19 88.2
MS.gene005502.t1 MTR_5g016610 45.783 83 44 1 135 216 174 256 5.84e-19 85.5
MS.gene005502.t1 MTR_2g045360 35.294 153 75 5 144 291 195 328 6.92e-19 87.0
MS.gene005502.t1 MTR_7g009730 43.810 105 53 2 119 217 173 277 7.99e-19 87.4
MS.gene005502.t1 MTR_4g107970 39.831 118 66 3 107 219 198 315 8.34e-19 87.4
MS.gene005502.t1 MTR_1g009613 38.000 100 61 1 118 216 220 319 1.00e-18 85.9
MS.gene005502.t1 MTR_3g009470 54.795 73 32 1 160 232 280 351 1.60e-18 86.7
MS.gene005502.t1 MTR_3g009470 50.000 64 31 1 117 180 453 515 5.63e-11 63.5
MS.gene005502.t1 MTR_7g079040 38.938 113 56 4 129 236 130 234 2.78e-18 84.3
MS.gene005502.t1 MTR_1g078260 50.704 71 34 1 147 216 234 304 3.02e-18 85.5
MS.gene005502.t1 MTR_5g029850 62.903 62 19 1 116 177 11 68 3.06e-18 78.2
MS.gene005502.t1 MTR_4g049760 44.872 78 42 1 147 223 277 354 7.06e-18 84.7
MS.gene005502.t1 MTR_3g106060 51.471 68 30 2 158 222 136 203 8.29e-18 82.8
MS.gene005502.t1 MTR_4g049790 46.154 78 41 1 147 223 299 376 1.23e-17 84.0
MS.gene005502.t1 MTR_1g013790 43.023 86 45 2 159 243 100 182 2.64e-17 80.5
MS.gene005502.t1 MTR_2g024380 42.222 90 50 2 141 228 231 320 3.35e-17 82.4
MS.gene005502.t1 MTR_3g108960 41.304 92 53 1 126 216 280 371 3.67e-17 82.0
MS.gene005502.t1 MTR_4g127040 39.362 94 54 2 134 226 221 312 6.42e-17 80.5
MS.gene005502.t1 MTR_4g094908 45.238 84 43 2 134 216 242 323 1.40e-16 79.7
MS.gene005502.t1 MTR_2g024350 45.714 70 37 1 160 228 8 77 1.77e-16 77.8
MS.gene005502.t1 MTR_8g087000 50.000 60 29 1 161 219 78 137 2.76e-16 77.4
MS.gene005502.t1 MTR_8g087000 50.000 60 29 1 161 219 77 136 2.80e-16 77.4
MS.gene005502.t1 MTR_2g016770 48.333 60 30 1 161 219 36 95 3.01e-16 76.6
MS.gene005502.t1 MTR_2g016770 48.333 60 30 1 161 219 28 87 3.65e-16 76.3
MS.gene005502.t1 MTR_1g099600 49.275 69 33 2 161 228 186 253 8.63e-16 77.0
MS.gene005502.t1 MTR_3g031220 44.444 81 40 2 143 223 185 260 1.60e-15 77.0
MS.gene005502.t1 MTR_0117s0040 40.000 105 61 2 115 218 30 133 1.66e-15 75.5
MS.gene005502.t1 MTR_8g099350 34.507 142 75 4 82 215 59 190 2.33e-15 76.3
MS.gene005502.t1 MTR_5g097500 46.053 76 41 0 145 220 215 290 3.06e-15 75.5
MS.gene005502.t1 MTR_5g097500 30.345 145 80 4 160 295 83 215 1.70e-11 64.7
MS.gene005502.t1 MTR_1g070455 50.877 57 27 1 161 216 294 350 9.33e-15 74.7
MS.gene005502.t1 MTR_8g067650 38.889 90 53 2 141 228 319 408 1.61e-14 74.3
MS.gene005502.t1 MTR_2g083870 50.000 60 29 1 161 219 81 140 1.93e-14 72.4
MS.gene005502.t1 MTR_8g067635 45.714 70 37 1 160 228 349 418 6.34e-14 72.8
MS.gene005502.t1 MTR_2g075680 35.398 113 70 1 106 215 94 206 1.76e-13 70.5
MS.gene005502.t1 MTR_8g069935 43.836 73 39 2 160 230 331 403 1.96e-13 71.2
MS.gene005502.t1 MTR_5g074200 49.206 63 31 1 160 222 220 281 2.67e-13 70.1
MS.gene005502.t1 MTR_3g090860 51.667 60 26 1 159 215 132 191 3.04e-13 70.1
MS.gene005502.t1 MTR_7g073430 50.847 59 26 1 160 215 122 180 5.39e-13 68.6
MS.gene005502.t1 MTR_7g117200 39.326 89 51 1 130 215 88 176 7.32e-13 68.6
MS.gene005502.t1 MTR_8g027860 38.043 92 49 2 132 215 103 194 9.30e-13 68.6
MS.gene005502.t1 MTR_4g047580 37.179 78 48 1 147 223 268 345 9.94e-13 68.9
MS.gene005502.t1 MTR_2g075750 48.333 60 28 1 159 215 27 86 1.14e-12 65.9
MS.gene005502.t1 MTR_5g067680 42.683 82 39 2 160 238 202 278 1.29e-12 68.2
MS.gene005502.t1 MTR_6g053200 38.272 81 49 1 160 239 330 410 2.82e-12 67.8
MS.gene005502.t1 MTR_2g075610 49.153 59 27 1 159 214 28 86 3.14e-12 64.7
MS.gene005502.t1 MTR_2g075700 38.235 102 51 3 123 215 104 202 6.11e-12 65.9
MS.gene005502.t1 MTR_3g095080 66.667 39 13 0 144 182 152 190 7.90e-12 63.9
MS.gene005502.t1 MTR_7g073380 46.667 60 29 1 159 215 122 181 8.90e-12 65.1
MS.gene005502.t1 MTR_8g032510 37.634 93 53 2 126 215 87 177 1.00e-11 65.1
MS.gene005502.t1 MTR_5g067700 44.828 58 29 1 161 215 107 164 9.80e-11 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene005502.t1 AT2G47260 48.773 326 132 6 31 327 18 337 2.66e-69 219
MS.gene005502.t1 AT4G18170 77.000 100 23 0 124 223 136 235 1.23e-50 171
MS.gene005502.t1 AT5G49520 46.667 255 119 6 79 323 137 384 4.22e-50 171
MS.gene005502.t1 AT1G29860 51.087 184 68 4 144 327 120 281 4.80e-49 166
MS.gene005502.t1 AT3G62340 36.877 301 147 7 27 327 19 276 5.23e-46 157
MS.gene005502.t1 AT1G69310 63.478 115 36 1 108 216 89 203 3.42e-43 150
MS.gene005502.t1 AT1G69310 63.478 115 36 1 108 216 89 203 3.42e-43 150
MS.gene005502.t1 AT1G69310 63.478 115 36 1 108 216 89 203 3.42e-43 150
MS.gene005502.t1 AT5G46350 77.647 85 18 1 146 229 169 253 5.76e-43 151
MS.gene005502.t1 AT1G69310 60.000 115 36 2 108 216 89 199 1.25e-37 135
MS.gene005502.t1 AT4G39410 58.654 104 41 2 133 234 195 298 3.66e-34 127
MS.gene005502.t1 AT2G03340 44.375 160 79 3 68 225 329 480 2.27e-32 126
MS.gene005502.t1 AT2G03340 60.000 60 23 1 160 219 250 308 2.27e-16 80.1
MS.gene005502.t1 AT5G13080 70.423 71 21 0 147 217 54 124 5.48e-32 117
MS.gene005502.t1 AT2G46130 66.234 77 26 0 141 217 11 87 1.37e-31 114
MS.gene005502.t1 AT2G44745 63.095 84 31 0 133 216 118 201 4.24e-31 117
MS.gene005502.t1 AT3G01970 68.571 70 22 0 147 216 52 121 1.26e-30 113
MS.gene005502.t1 AT5G41570 59.341 91 34 1 130 217 65 155 1.36e-30 114
MS.gene005502.t1 AT1G13960 47.581 124 62 2 99 219 345 468 3.04e-30 120
MS.gene005502.t1 AT1G13960 60.000 60 23 1 160 219 229 287 1.18e-16 80.9
MS.gene005502.t1 AT1G13960 47.581 124 62 2 99 219 192 315 4.09e-30 117
MS.gene005502.t1 AT1G13960 60.000 60 23 1 160 219 76 134 1.18e-16 80.1
MS.gene005502.t1 AT1G64000 67.606 71 23 0 147 217 101 171 2.58e-29 111
MS.gene005502.t1 AT5G07100 43.511 131 66 1 94 224 83 205 3.34e-29 112
MS.gene005502.t1 AT5G07100 46.970 66 35 0 160 225 24 89 1.10e-14 72.4
MS.gene005502.t1 AT5G07100 43.511 131 66 1 94 224 83 205 3.34e-29 112
MS.gene005502.t1 AT5G07100 46.970 66 35 0 160 225 24 89 1.10e-14 72.4
MS.gene005502.t1 AT5G07100 43.511 131 66 1 94 224 83 205 3.34e-29 112
MS.gene005502.t1 AT5G07100 46.970 66 35 0 160 225 24 89 1.10e-14 72.4
MS.gene005502.t1 AT5G07100 43.511 131 66 1 94 224 83 205 3.34e-29 112
MS.gene005502.t1 AT5G07100 46.970 66 35 0 160 225 24 89 1.10e-14 72.4
MS.gene005502.t1 AT5G07100 43.846 130 65 1 94 223 176 297 1.33e-28 112
MS.gene005502.t1 AT5G07100 51.667 60 29 0 160 219 117 176 2.44e-14 72.8
MS.gene005502.t1 AT2G38470 43.885 139 69 3 103 232 296 434 2.20e-28 115
MS.gene005502.t1 AT2G38470 58.333 60 24 1 160 219 184 242 4.71e-15 76.3
MS.gene005502.t1 AT4G26640 40.217 184 93 6 97 273 144 317 2.21e-28 113
MS.gene005502.t1 AT4G26640 54.286 70 31 1 160 229 35 103 4.36e-17 81.6
MS.gene005502.t1 AT4G26640 40.217 184 93 6 97 273 144 317 2.21e-28 113
MS.gene005502.t1 AT4G26640 54.286 70 31 1 160 229 35 103 4.36e-17 81.6
MS.gene005502.t1 AT4G26640 40.217 184 93 6 97 273 144 317 2.21e-28 113
MS.gene005502.t1 AT4G26640 54.286 70 31 1 160 229 35 103 4.36e-17 81.6
MS.gene005502.t1 AT4G26640 40.217 184 93 6 97 273 144 317 2.21e-28 113
MS.gene005502.t1 AT4G26640 54.286 70 31 1 160 229 35 103 4.36e-17 81.6
MS.gene005502.t1 AT5G26170 63.889 72 26 0 147 218 100 171 2.68e-28 108
MS.gene005502.t1 AT4G26640 45.185 135 70 2 97 230 248 379 5.78e-28 113
MS.gene005502.t1 AT4G26640 54.286 70 31 1 160 229 139 207 7.25e-17 81.6
MS.gene005502.t1 AT4G26640 45.185 135 70 2 97 230 280 411 5.93e-28 114
MS.gene005502.t1 AT4G26640 54.286 70 31 1 160 229 171 239 8.57e-17 81.3
MS.gene005502.t1 AT4G26640 45.185 135 70 2 97 230 320 451 8.30e-28 114
MS.gene005502.t1 AT4G26640 54.286 70 31 1 160 229 211 279 8.00e-17 81.6
MS.gene005502.t1 AT3G01080 64.000 75 27 0 145 219 291 365 3.33e-27 110
MS.gene005502.t1 AT3G01080 53.030 66 30 1 160 225 167 231 1.13e-15 77.8
MS.gene005502.t1 AT3G01080 64.000 75 27 0 145 219 329 403 3.59e-27 111
MS.gene005502.t1 AT3G01080 53.030 66 30 1 160 225 205 269 1.15e-15 77.8
MS.gene005502.t1 AT2G46130 61.039 77 26 1 141 217 11 83 3.07e-26 100
MS.gene005502.t1 AT4G26440 48.214 112 57 1 119 229 330 441 3.75e-26 108
MS.gene005502.t1 AT4G26440 50.725 69 33 1 160 228 178 245 2.06e-15 77.4
MS.gene005502.t1 AT2G21900 50.000 86 38 2 141 221 85 170 2.31e-25 101
MS.gene005502.t1 AT5G56270 60.526 76 30 0 144 219 471 546 4.26e-25 106
MS.gene005502.t1 AT5G56270 52.778 72 31 2 160 231 273 341 5.40e-16 79.3
MS.gene005502.t1 AT5G64810 45.745 94 49 1 125 218 77 168 1.43e-24 99.0
MS.gene005502.t1 AT2G30250 57.500 80 34 0 144 223 312 391 9.88e-24 100
MS.gene005502.t1 AT2G30250 44.828 87 39 2 161 239 167 252 2.71e-13 70.5
MS.gene005502.t1 AT2G04880 57.534 73 31 0 147 219 270 342 2.02e-23 100
MS.gene005502.t1 AT2G04880 57.377 61 25 1 159 219 110 169 7.73e-16 78.6
MS.gene005502.t1 AT2G04880 57.534 73 31 0 147 219 294 366 2.32e-23 100
MS.gene005502.t1 AT2G04880 57.377 61 25 1 159 219 110 169 7.52e-16 78.6
MS.gene005502.t1 AT1G55600 56.164 73 32 0 147 219 294 366 7.10e-22 96.3
MS.gene005502.t1 AT2G37260 61.290 62 24 0 155 216 262 323 1.03e-21 94.4
MS.gene005502.t1 AT2G37260 40.984 122 61 4 143 254 65 185 1.87e-15 76.6
MS.gene005502.t1 AT2G37260 61.290 62 24 0 155 216 264 325 1.05e-21 94.4
MS.gene005502.t1 AT2G37260 40.984 122 61 4 143 254 67 187 1.70e-15 76.6
MS.gene005502.t1 AT2G37260 61.290 62 24 0 155 216 344 405 1.81e-21 94.7
MS.gene005502.t1 AT2G37260 40.984 122 61 4 143 254 147 267 3.48e-15 76.3
MS.gene005502.t1 AT4G04450 51.948 77 36 1 144 219 182 258 3.70e-21 94.0
MS.gene005502.t1 AT1G62300 40.164 122 70 2 101 219 251 372 4.32e-21 94.4
MS.gene005502.t1 AT4G22070 51.948 77 36 1 144 219 281 357 8.00e-21 93.6
MS.gene005502.t1 AT4G22070 51.948 77 36 1 144 219 281 357 8.00e-21 93.6
MS.gene005502.t1 AT4G22070 51.948 77 36 1 144 219 281 357 8.00e-21 93.6
MS.gene005502.t1 AT4G22070 51.948 77 36 1 144 219 281 357 8.00e-21 93.6
MS.gene005502.t1 AT4G04450 51.948 77 36 1 144 219 276 352 9.24e-21 93.2
MS.gene005502.t1 AT1G68150 50.649 77 37 1 144 219 219 295 3.63e-20 90.5
MS.gene005502.t1 AT1G80840 55.556 63 27 1 159 220 145 207 3.92e-20 89.4
MS.gene005502.t1 AT4G31800 55.385 65 28 1 159 222 110 174 7.62e-20 87.4
MS.gene005502.t1 AT2G25000 47.059 85 38 2 159 242 102 180 1.17e-19 86.7
MS.gene005502.t1 AT2G25000 47.059 85 38 2 159 242 102 180 1.17e-19 86.7
MS.gene005502.t1 AT4G31800 55.385 65 28 1 159 222 175 239 1.21e-19 88.2
MS.gene005502.t1 AT5G52830 55.072 69 29 2 161 228 166 233 1.27e-19 88.6
MS.gene005502.t1 AT1G30650 55.072 69 29 2 161 228 218 285 1.41e-19 89.4
MS.gene005502.t1 AT2G34830 55.072 69 29 2 161 228 216 283 1.51e-19 89.4
MS.gene005502.t1 AT2G34830 55.072 69 29 2 161 228 225 292 1.61e-19 89.0
MS.gene005502.t1 AT2G25000 47.059 85 38 2 159 242 124 202 2.11e-19 86.3
MS.gene005502.t1 AT2G25000 47.059 85 38 2 159 242 145 223 2.74e-19 86.3
MS.gene005502.t1 AT4G01720 44.330 97 45 2 124 219 211 299 4.17e-19 88.2
MS.gene005502.t1 AT1G18860 49.351 77 38 1 144 219 223 299 5.18e-19 88.2
MS.gene005502.t1 AT5G43290 52.113 71 33 1 147 216 100 170 5.69e-19 85.5
MS.gene005502.t1 AT5G45050 55.072 69 29 2 161 228 1042 1109 8.09e-19 87.8
MS.gene005502.t1 AT5G45050 55.072 69 29 2 161 228 1181 1248 8.21e-19 87.8
MS.gene005502.t1 AT5G45050 55.072 69 29 2 161 228 1153 1220 8.48e-19 87.8
MS.gene005502.t1 AT4G30935 31.646 158 97 3 94 245 259 411 2.75e-18 85.9
MS.gene005502.t1 AT4G01250 50.725 69 32 2 161 228 129 196 3.20e-18 84.0
MS.gene005502.t1 AT1G29280 52.381 63 29 1 161 222 75 137 1.05e-17 81.6
MS.gene005502.t1 AT5G15130 46.753 77 40 1 144 219 211 287 1.11e-17 84.0
MS.gene005502.t1 AT5G15130 46.753 77 40 1 144 219 169 245 1.14e-17 84.0
MS.gene005502.t1 AT4G31550 44.048 84 44 2 134 216 222 303 1.62e-17 82.4
MS.gene005502.t1 AT4G31550 43.902 82 45 1 136 216 221 302 2.08e-17 82.0
MS.gene005502.t1 AT2G30590 41.667 84 48 1 135 217 288 371 2.54e-17 82.4
MS.gene005502.t1 AT3G58710 32.258 155 82 4 69 222 2 134 6.67e-17 79.7
MS.gene005502.t1 AT2G23320 43.373 83 46 1 135 216 215 297 6.86e-17 80.5
MS.gene005502.t1 AT3G58710 48.611 72 36 1 152 222 62 133 1.03e-16 79.3
MS.gene005502.t1 AT2G24570 42.697 89 48 2 134 221 219 305 2.57e-16 79.0
MS.gene005502.t1 AT5G28650 40.217 92 54 1 135 225 237 328 3.77e-16 78.6
MS.gene005502.t1 AT1G69810 39.024 123 60 4 109 229 107 216 5.80e-16 77.8
MS.gene005502.t1 AT3G04670 40.217 92 54 1 135 225 237 328 6.19e-16 77.8
MS.gene005502.t1 AT3G01080 53.030 66 30 1 160 225 205 269 6.45e-16 77.8
MS.gene005502.t1 AT1G69810 39.024 123 60 4 109 229 165 274 8.92e-16 77.8
MS.gene005502.t1 AT4G23550 46.667 75 38 2 155 228 135 208 2.80e-15 75.9
MS.gene005502.t1 AT4G24240 39.759 83 49 1 135 216 256 338 1.30e-14 74.3
MS.gene005502.t1 AT1G66560 50.847 59 26 1 160 215 103 161 3.81e-14 71.6
MS.gene005502.t1 AT5G45260 48.571 70 32 2 161 227 1209 1277 5.15e-14 73.6
MS.gene005502.t1 AT4G12020 39.796 98 54 2 88 180 564 661 1.36e-13 72.4
MS.gene005502.t1 AT4G12020 44.118 68 37 1 158 225 466 532 2.88e-12 68.2
MS.gene005502.t1 AT4G12020 39.796 98 54 2 88 180 564 661 1.36e-13 72.4
MS.gene005502.t1 AT4G12020 44.118 68 37 1 158 225 466 532 2.88e-12 68.2
MS.gene005502.t1 AT4G12020 39.796 98 54 2 88 180 564 661 1.40e-13 72.4
MS.gene005502.t1 AT4G12020 44.118 68 37 1 158 225 466 532 2.90e-12 68.2
MS.gene005502.t1 AT4G12020 39.796 98 54 2 88 180 564 661 1.43e-13 72.4
MS.gene005502.t1 AT4G12020 44.118 68 37 1 158 225 466 532 3.09e-12 68.2
MS.gene005502.t1 AT4G12020 39.796 98 54 2 88 180 564 661 1.48e-13 72.0
MS.gene005502.t1 AT4G12020 44.118 68 37 1 158 225 466 532 3.24e-12 68.2
MS.gene005502.t1 AT4G12020 39.796 98 54 2 88 180 497 594 1.50e-13 72.0
MS.gene005502.t1 AT4G12020 44.118 68 37 1 158 225 399 465 3.28e-12 68.2
MS.gene005502.t1 AT4G12020 39.796 98 54 2 88 180 564 661 1.52e-13 72.0
MS.gene005502.t1 AT4G12020 44.118 68 37 1 158 225 466 532 3.33e-12 68.2
MS.gene005502.t1 AT4G12020 39.796 98 54 2 88 180 564 661 1.52e-13 72.0
MS.gene005502.t1 AT4G12020 44.118 68 37 1 158 225 466 532 3.33e-12 68.2
MS.gene005502.t1 AT4G12020 39.796 98 54 2 88 180 564 661 1.56e-13 72.0
MS.gene005502.t1 AT4G12020 44.118 68 37 1 158 225 466 532 3.38e-12 68.2
MS.gene005502.t1 AT4G12020 39.796 98 54 2 88 180 564 661 1.59e-13 72.0
MS.gene005502.t1 AT4G12020 44.118 68 37 1 158 225 466 532 3.67e-12 67.8
MS.gene005502.t1 AT4G12020 39.796 98 54 2 88 180 564 661 1.62e-13 72.0
MS.gene005502.t1 AT4G12020 44.776 67 36 1 159 225 467 532 3.71e-12 67.8
MS.gene005502.t1 AT2G46400 40.698 86 48 1 133 215 77 162 1.64e-13 70.5
MS.gene005502.t1 AT3G56400 48.333 60 28 1 159 215 119 178 6.56e-13 68.6
MS.gene005502.t1 AT4G11070 52.542 59 25 1 160 215 109 167 1.40e-12 67.4
MS.gene005502.t1 AT4G11070 52.542 59 25 1 160 215 141 199 1.58e-12 67.8
MS.gene005502.t1 AT1G66600 50.000 60 27 1 159 215 102 161 2.43e-12 66.2
MS.gene005502.t1 AT1G80590 44.615 65 33 1 161 222 86 150 3.30e-12 65.9
MS.gene005502.t1 AT1G66550 50.000 58 26 1 161 215 104 161 3.89e-12 65.9
MS.gene005502.t1 AT1G66550 50.000 58 26 1 161 215 109 166 4.80e-12 65.5
MS.gene005502.t1 AT2G40740 35.922 103 58 2 160 254 182 284 8.01e-12 65.5
MS.gene005502.t1 AT2G40740 35.922 103 58 2 160 254 173 275 8.67e-12 65.1
MS.gene005502.t1 AT2G40750 49.153 59 27 1 160 215 152 210 2.69e-11 64.3
MS.gene005502.t1 AT4G23810 49.153 59 27 1 160 215 158 216 2.90e-11 63.9
MS.gene005502.t1 AT5G24110 38.961 77 39 2 159 232 112 183 3.51e-11 63.5
MS.gene005502.t1 AT5G01900 47.368 57 27 1 161 214 111 167 6.72e-11 62.4

Find 67 sgRNAs with CRISPR-Local

Find 100 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAGTTCTTCTTTAGGGTTTA+TGG 0.122782 1.1:-64372387 MS.gene005502:CDS
AAGGGACAACTGCATTTCTT+AGG 0.222393 1.1:-64371036 MS.gene005502:CDS
TCTTCCTCATCTTTGCTAAA+TGG 0.233660 1.1:-64372452 MS.gene005502:CDS
ACTGCATTTCTTAGGGATAA+TGG 0.268383 1.1:-64371028 MS.gene005502:CDS
TTGAAAGAAGTTCTTCTTTA+GGG 0.269989 1.1:-64372394 MS.gene005502:CDS
AATGATGAAGAATTGTTATA+AGG 0.284749 1.1:+64371106 None:intergenic
GTTGAAAGAAGTTCTTCTTT+AGG 0.298040 1.1:-64372395 MS.gene005502:CDS
CTGCATTTCTTAGGGATAAT+GGG 0.307370 1.1:-64371027 MS.gene005502:CDS
TAGGAGTTGCAGGTTGTTGC+TGG 0.317655 1.1:+64372246 None:intergenic
ACTCTCTCTTGGGCAGTAAA+AGG 0.341688 1.1:+64371073 None:intergenic
ATGTCCCGTTCCGCCTTTGC+CGG 0.342549 1.1:-64371283 MS.gene005502:CDS
AAGTAGTTGTTGATGTTGAT+AGG 0.343522 1.1:+64371156 None:intergenic
TAGGGATAATGGGCTACTTC+AGG 0.363679 1.1:-64371017 MS.gene005502:CDS
AACTCCGGCAAAGGCGGAAC+GGG 0.372094 1.1:+64371279 None:intergenic
CTTCTTCATCTTCTTCTGCT+TGG 0.373036 1.1:+64372162 None:intergenic
TTTGTCATGAAAGCAAATCT+TGG 0.391626 1.1:+64371629 None:intergenic
TACAAAGCTGTACTCTCTCT+TGG 0.398729 1.1:+64371062 None:intergenic
GAACAAGAGTTAGGAGTTGC+AGG 0.406933 1.1:+64372236 None:intergenic
GATGAAATCGAACAAGAGTT+AGG 0.413947 1.1:+64372227 None:intergenic
TATGAGTAGTACCTTGGAAA+AGG 0.414311 1.1:+64371536 None:intergenic
TATGGAGTTACTTGGCGGTC+AGG 0.421864 1.1:-64372369 MS.gene005502:CDS
AGAGTACAGCTTTGTAATCA+AGG 0.440017 1.1:-64371055 MS.gene005502:CDS
ACCACCCGCCGGTGTAGTCT+CGG 0.441892 1.1:-64371248 MS.gene005502:CDS
TTAGGGTTTATGGAGTTACT+TGG 0.441961 1.1:-64372377 MS.gene005502:CDS
GGATTTCCAGCTACTAACTT+TGG 0.448624 1.1:-64371223 MS.gene005502:CDS
ATGATGAAGAATTGTTATAA+GGG 0.461940 1.1:+64371107 None:intergenic
AGGGACAACTGCATTTCTTA+GGG 0.464209 1.1:-64371035 MS.gene005502:CDS
ATGAGTAGTACCTTGGAAAA+GGG 0.468338 1.1:+64371537 None:intergenic
ACTGAACCAAAGTTAGTAGC+TGG 0.485678 1.1:+64371217 None:intergenic
ACAAAGCTGTACTCTCTCTT+GGG 0.501900 1.1:+64371063 None:intergenic
AAGGCGGAACGGGACATAGT+TGG 0.509083 1.1:+64371289 None:intergenic
GGGTTTATGGAGTTACTTGG+CGG 0.527548 1.1:-64372374 MS.gene005502:CDS
ATTGTAGTCACAACATATGA+AGG 0.530444 1.1:-64371331 MS.gene005502:CDS
TTTGACCGTACTTTCTCCAT+CGG 0.538876 1.1:+64371576 None:intergenic
AGTAGTTGTTGATGTTGATA+GGG 0.541403 1.1:+64371157 None:intergenic
TATGTTGTGACTACAATGCT+TGG 0.546996 1.1:+64371337 None:intergenic
TCATATGGAGAAGAAAGAGA+TGG 0.554668 1.1:-64372510 None:intergenic
CATATGGAGAAGAAAGAGAT+GGG 0.559126 1.1:-64372509 MS.gene005502:CDS
CCACCCGCCGGTGTAGTCTC+GGG 0.562733 1.1:-64371247 MS.gene005502:CDS
GAACGGGACATAGTTGGACT+TGG 0.567628 1.1:+64371295 None:intergenic
TTGGACTTGGATGTGTGTGT+TGG 0.571102 1.1:+64371308 None:intergenic
GGATACCGATGGAGAAAGTA+CGG 0.573593 1.1:-64371581 MS.gene005502:CDS
GAGTACAGCTTTGTAATCAA+GGG 0.578972 1.1:-64371054 MS.gene005502:CDS
GAGGTTGATCATCTGGAAGA+TGG 0.579335 1.1:-64371602 MS.gene005502:CDS
GAGACTACACCGGCGGGTGG+TGG 0.579641 1.1:+64371250 None:intergenic
CAGACATGGTTGGTACATCA+AGG 0.580908 1.1:+64372333 None:intergenic
GTTATAAGGGTGATTCAAAG+AGG 0.581408 1.1:+64371120 None:intergenic
TGGTATTTGAACTCCGGCAA+AGG 0.581607 1.1:+64371270 None:intergenic
CTTGACATTACATGAAGCAG+TGG 0.584317 1.1:+64371387 None:intergenic
TCTTCTTTCAACATATGTGA+AGG 0.587303 1.1:+64370986 None:intergenic
GAACTCCGGCAAAGGCGGAA+CGG 0.591004 1.1:+64371278 None:intergenic
ATAACCATTTAGCAAAGATG+AGG 0.592773 1.1:+64372448 None:intergenic
GGGTGGTGGTATTTGAACTC+CGG 0.600942 1.1:+64371264 None:intergenic
CCCGCCGGTGTAGTCTCGGG+TGG 0.601478 1.1:-64371244 MS.gene005502:CDS
GGGTGTAAGTGTGAAGAGTG+AGG 0.617036 1.1:-64372489 MS.gene005502:CDS
ATCTGGAAGATGGATACCGA+TGG 0.620143 1.1:-64371592 MS.gene005502:CDS
CCACCCGAGACTACACCGGC+GGG 0.621520 1.1:+64371244 None:intergenic
TGAGTCACTGCAGACATGGT+TGG 0.623255 1.1:+64372323 None:intergenic
CCCGAGACTACACCGGCGGG+TGG 0.635933 1.1:+64371247 None:intergenic
ATGTAATGTCAAGAAACGTG+TGG 0.638009 1.1:-64371377 MS.gene005502:CDS
AAATCCACCCGAGACTACAC+CGG 0.638946 1.1:+64371240 None:intergenic
TATTTGAACTCCGGCAAAGG+CGG 0.643870 1.1:+64371273 None:intergenic
TCCACCCGAGACTACACCGG+CGG 0.646130 1.1:+64371243 None:intergenic
ATGGTTGGTACATCAAGGAG+AGG 0.679075 1.1:+64372338 None:intergenic
GTTCAAATACCACCACCCGC+CGG 0.680657 1.1:-64371259 MS.gene005502:CDS
ATTATGAGTCACTGCAGACA+TGG 0.710153 1.1:+64372319 None:intergenic
AAGCGTGTTTGATTTCTGTG+AGG 0.717658 1.1:-64372417 MS.gene005502:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTGTTTTCATATTTTTT+TGG - chr1.1:64371484-64371503 MS.gene005502:intron 10.0%
!! GATTGATTAATTAATTATGA+AGG - chr1.1:64371744-64371763 MS.gene005502:intron 15.0%
!!! TCTAGTTTTTTTTTTTTTGT+TGG - chr1.1:64371549-64371568 MS.gene005502:CDS 15.0%
!! AATGATGAAGAATTGTTATA+AGG + chr1.1:64372385-64372404 None:intergenic 20.0%
!! ACAAAAAAGAGAAAATTAGA+AGG + chr1.1:64371393-64371412 None:intergenic 20.0%
!! ATAACTTCAAAAAAAGTGAA+TGG - chr1.1:64371577-64371596 MS.gene005502:CDS 20.0%
!! ATGATGAAGAATTGTTATAA+GGG + chr1.1:64372384-64372403 None:intergenic 20.0%
!! CTTCAAACATATATAATTTG+AGG - chr1.1:64371614-64371633 MS.gene005502:CDS 20.0%
!! GCTAAATAATCTAATCTAAT+TGG + chr1.1:64371677-64371696 None:intergenic 20.0%
!! TATTTAGCAAATGAATATGT+TGG - chr1.1:64371689-64371708 MS.gene005502:intron 20.0%
!!! AATTTTCTCTTTTTTGTTGT+TGG - chr1.1:64371396-64371415 MS.gene005502:CDS 20.0%
!!! TACAGTTTACTAATGATTTT+GGG + chr1.1:64372028-64372047 None:intergenic 20.0%
!!! TGTTTTCATATTTTTTTGGT+GGG - chr1.1:64371488-64371507 MS.gene005502:intron 20.0%
!!! TTACAGTTTACTAATGATTT+TGG + chr1.1:64372029-64372048 None:intergenic 20.0%
!!! TTGTTTTCATATTTTTTTGG+TGG - chr1.1:64371487-64371506 MS.gene005502:intron 20.0%
! CAAACATATATAATTTGAGG+TGG - chr1.1:64371617-64371636 MS.gene005502:CDS 25.0%
! TTGAAAGAAGTTCTTCTTTA+GGG - chr1.1:64371094-64371113 MS.gene005502:CDS 25.0%
!! AATTTTTATGAGTAGTACCT+TGG + chr1.1:64371961-64371980 None:intergenic 25.0%
!! ATATATAATTTGAGGTGGTA+TGG - chr1.1:64371622-64371641 MS.gene005502:CDS 25.0%
!!! AATCAAGATTTGATGGATTA+TGG - chr1.1:64371771-64371790 MS.gene005502:intron 25.0%
!!! ATCAAGATTTGATGGATTAT+GGG - chr1.1:64371772-64371791 MS.gene005502:intron 25.0%
!!! GTTTTCATATTTTTTTGGTG+GGG - chr1.1:64371489-64371508 MS.gene005502:intron 25.0%
AAGTAGTTGTTGATGTTGAT+AGG + chr1.1:64372335-64372354 None:intergenic 30.0%
AGTAGTTGTTGATGTTGATA+GGG + chr1.1:64372334-64372353 None:intergenic 30.0%
ATAACCATTTAGCAAAGATG+AGG + chr1.1:64371043-64371062 None:intergenic 30.0%
ATTGTAGTCACAACATATGA+AGG - chr1.1:64372157-64372176 MS.gene005502:CDS 30.0%
CAAAAAAAGTGAATGGTTGT+TGG - chr1.1:64371584-64371603 MS.gene005502:CDS 30.0%
CTATGTGTTTATGTTTGTGT+AGG - chr1.1:64372062-64372081 MS.gene005502:intron 30.0%
CTGGTTGTATATATGTGATT+AGG - chr1.1:64371797-64371816 MS.gene005502:intron 30.0%
GTTGAAAGAAGTTCTTCTTT+AGG - chr1.1:64371093-64371112 MS.gene005502:CDS 30.0%
TATTTCAGCTGTGATGAAAA+AGG - chr1.1:64371438-64371457 MS.gene005502:intron 30.0%
TCTTCTTTCAACATATGTGA+AGG + chr1.1:64372505-64372524 None:intergenic 30.0%
TTTGTCATGAAAGCAAATCT+TGG + chr1.1:64371862-64371881 None:intergenic 30.0%
! AGGTTCTAATCAAGATTTGA+TGG - chr1.1:64371764-64371783 MS.gene005502:intron 30.0%
!! AAGTTCTTCTTTAGGGTTTA+TGG - chr1.1:64371101-64371120 MS.gene005502:CDS 30.0%
!!! ATATTTTTTTGGTGGGGTTA+TGG - chr1.1:64371495-64371514 MS.gene005502:intron 30.0%
ACTGCATTTCTTAGGGATAA+TGG - chr1.1:64372460-64372479 MS.gene005502:CDS 35.0%
AGCAAAAGACAAACAAACAG+TGG - chr1.1:64371358-64371377 MS.gene005502:CDS 35.0%
AGCAAATGAATATGTTGGTG+TGG - chr1.1:64371694-64371713 MS.gene005502:intron 35.0%
ATGAGTAGTACCTTGGAAAA+GGG + chr1.1:64371954-64371973 None:intergenic 35.0%
ATGTAATGTCAAGAAACGTG+TGG - chr1.1:64372111-64372130 MS.gene005502:intron 35.0%
CTGCATTTCTTAGGGATAAT+GGG - chr1.1:64372461-64372480 MS.gene005502:CDS 35.0%
GATGAAATCGAACAAGAGTT+AGG + chr1.1:64371264-64371283 None:intergenic 35.0%
GCAAAAGACAAACAAACAGT+GGG - chr1.1:64371359-64371378 MS.gene005502:CDS 35.0%
GTTATAAGGGTGATTCAAAG+AGG + chr1.1:64372371-64372390 None:intergenic 35.0%
TATGAGTAGTACCTTGGAAA+AGG + chr1.1:64371955-64371974 None:intergenic 35.0%
TATGTTGTGACTACAATGCT+TGG + chr1.1:64372154-64372173 None:intergenic 35.0%
TCTTCCTCATCTTTGCTAAA+TGG - chr1.1:64371036-64371055 MS.gene005502:CDS 35.0%
TTAGGGTTTATGGAGTTACT+TGG - chr1.1:64371111-64371130 MS.gene005502:CDS 35.0%
! AGAGTACAGCTTTGTAATCA+AGG - chr1.1:64372433-64372452 MS.gene005502:CDS 35.0%
! GAGTACAGCTTTGTAATCAA+GGG - chr1.1:64372434-64372453 MS.gene005502:CDS 35.0%
! TCAAAAATAGCCCTTTTCCA+AGG - chr1.1:64371941-64371960 MS.gene005502:intron 35.0%
!! AACTTTGGTTCAGTTTTGCA+AGG - chr1.1:64372280-64372299 MS.gene005502:CDS 35.0%
!! ATCTGAAAAAGAGTGTTCTG+AGG - chr1.1:64371212-64371231 MS.gene005502:CDS 35.0%
!! ATTTGATGGATTATGGGATC+TGG - chr1.1:64371778-64371797 MS.gene005502:intron 35.0%
!! TCTTTGAGTTCACACTCTTT+TGG - chr1.1:64371980-64371999 MS.gene005502:intron 35.0%
AAGGGACAACTGCATTTCTT+AGG - chr1.1:64372452-64372471 MS.gene005502:CDS 40.0%
ACAAAGCTGTACTCTCTCTT+GGG + chr1.1:64372428-64372447 None:intergenic 40.0%
ACTGAACCAAAGTTAGTAGC+TGG + chr1.1:64372274-64372293 None:intergenic 40.0%
AGGGACAACTGCATTTCTTA+GGG - chr1.1:64372453-64372472 MS.gene005502:CDS 40.0%
ATTATGAGTCACTGCAGACA+TGG + chr1.1:64371172-64371191 None:intergenic 40.0%
CTTCTTCATCTTCTTCTGCT+TGG + chr1.1:64371329-64371348 None:intergenic 40.0%
CTTGACATTACATGAAGCAG+TGG + chr1.1:64372104-64372123 None:intergenic 40.0%
GGATTTCCAGCTACTAACTT+TGG - chr1.1:64372265-64372284 MS.gene005502:CDS 40.0%
TACAAAGCTGTACTCTCTCT+TGG + chr1.1:64372429-64372448 None:intergenic 40.0%
TGCTTTCATGACAAAAAGCG+AGG - chr1.1:64371867-64371886 MS.gene005502:intron 40.0%
TTTGACCGTACTTTCTCCAT+CGG + chr1.1:64371915-64371934 None:intergenic 40.0%
! AAAAAGCGAGGTTGATCATC+TGG - chr1.1:64371879-64371898 MS.gene005502:intron 40.0%
! AAGCGTGTTTGATTTCTGTG+AGG - chr1.1:64371071-64371090 MS.gene005502:CDS 40.0%
ACTCTCTCTTGGGCAGTAAA+AGG + chr1.1:64372418-64372437 None:intergenic 45.0%
ATCTGGAAGATGGATACCGA+TGG - chr1.1:64371896-64371915 MS.gene005502:intron 45.0%
GAACAAGAGTTAGGAGTTGC+AGG + chr1.1:64371255-64371274 None:intergenic 45.0%
GGATACCGATGGAGAAAGTA+CGG - chr1.1:64371907-64371926 MS.gene005502:intron 45.0%
GGGTTTATGGAGTTACTTGG+CGG - chr1.1:64371114-64371133 MS.gene005502:CDS 45.0%
TATTTGAACTCCGGCAAAGG+CGG + chr1.1:64372218-64372237 None:intergenic 45.0%
TGGTATTTGAACTCCGGCAA+AGG + chr1.1:64372221-64372240 None:intergenic 45.0%
TTGGACTTGGATGTGTGTGT+TGG + chr1.1:64372183-64372202 None:intergenic 45.0%
! ATGGTTGGTACATCAAGGAG+AGG + chr1.1:64371153-64371172 None:intergenic 45.0%
! CAGACATGGTTGGTACATCA+AGG + chr1.1:64371158-64371177 None:intergenic 45.0%
! GAGGTTGATCATCTGGAAGA+TGG - chr1.1:64371886-64371905 MS.gene005502:intron 45.0%
!! TAGGGATAATGGGCTACTTC+AGG - chr1.1:64372471-64372490 MS.gene005502:CDS 45.0%
AAATCCACCCGAGACTACAC+CGG + chr1.1:64372251-64372270 None:intergenic 50.0%
GAACGGGACATAGTTGGACT+TGG + chr1.1:64372196-64372215 None:intergenic 50.0%
GGGTGTAAGTGTGAAGAGTG+AGG - chr1.1:64370999-64371018 MS.gene005502:CDS 50.0%
TAGGAGTTGCAGGTTGTTGC+TGG + chr1.1:64371245-64371264 None:intergenic 50.0%
TATGGAGTTACTTGGCGGTC+AGG - chr1.1:64371119-64371138 MS.gene005502:CDS 50.0%
TGAGTCACTGCAGACATGGT+TGG + chr1.1:64371168-64371187 None:intergenic 50.0%
! GGGTGGTGGTATTTGAACTC+CGG + chr1.1:64372227-64372246 None:intergenic 50.0%
AAGGCGGAACGGGACATAGT+TGG + chr1.1:64372202-64372221 None:intergenic 55.0%
GTTCAAATACCACCACCCGC+CGG - chr1.1:64372229-64372248 MS.gene005502:CDS 55.0%
AACTCCGGCAAAGGCGGAAC+GGG + chr1.1:64372212-64372231 None:intergenic 60.0%
ATGTCCCGTTCCGCCTTTGC+CGG - chr1.1:64372205-64372224 MS.gene005502:CDS 60.0%
GAACTCCGGCAAAGGCGGAA+CGG + chr1.1:64372213-64372232 None:intergenic 60.0%
ACCACCCGCCGGTGTAGTCT+CGG - chr1.1:64372240-64372259 MS.gene005502:CDS 65.0%
TCCACCCGAGACTACACCGG+CGG + chr1.1:64372248-64372267 None:intergenic 65.0%
CCACCCGAGACTACACCGGC+GGG + chr1.1:64372247-64372266 None:intergenic 70.0%
CCACCCGCCGGTGTAGTCTC+GGG - chr1.1:64372241-64372260 MS.gene005502:CDS 70.0%
GAGACTACACCGGCGGGTGG+TGG + chr1.1:64372241-64372260 None:intergenic 70.0%
CCCGAGACTACACCGGCGGG+TGG + chr1.1:64372244-64372263 None:intergenic 75.0%
CCCGCCGGTGTAGTCTCGGG+TGG - chr1.1:64372244-64372263 MS.gene005502:CDS 75.0%


Chromosome Type Strat End Strand Name
chr1.1 gene 64370982 64372528 64370982 ID=MS.gene005502
chr1.1 mRNA 64370982 64372528 64370982 ID=MS.gene005502.t1;Parent=MS.gene005502
chr1.1 exon 64372134 64372528 64372134 ID=MS.gene005502.t1.exon1;Parent=MS.gene005502.t1
chr1.1 CDS 64372134 64372528 64372134 ID=cds.MS.gene005502.t1;Parent=MS.gene005502.t1
chr1.1 exon 64371548 64371691 64371548 ID=MS.gene005502.t1.exon2;Parent=MS.gene005502.t1
chr1.1 CDS 64371548 64371691 64371548 ID=cds.MS.gene005502.t1;Parent=MS.gene005502.t1
chr1.1 exon 64370982 64371426 64370982 ID=MS.gene005502.t1.exon3;Parent=MS.gene005502.t1
chr1.1 CDS 64370982 64371426 64370982 ID=cds.MS.gene005502.t1;Parent=MS.gene005502.t1
Gene Sequence

>MS.gene005502

ATGGAGAAGAAAGAGATGGGTGTAAGTGTGAAGAGTGAGGATGTTATTGTTGATTCTTCCTCATCTTTGCTAAATGGTTATCAATTTTCAAGCGTGTTTGATTTCTGTGAGGTTGAAAGAAGTTCTTCTTTAGGGTTTATGGAGTTACTTGGCGGTCAGGACTATACTCCTCTCCTTGATGTACCAACCATGTCTGCAGTGACTCATAATCACAATACAGTTAAATCTTCATCTGAAAAAGAGTGTTCTGAGGTTTTGAACCAGCAACAACCTGCAACTCCTAACTCTTGTTCGATTTCATCTGCATCTAGTGAAGCAGTCAATGATAATAAGATTGTTGTTAACCAAGCAGAAGAAGATGAAGAAGAAGAAGAAAAGCAAAAGACAAACAAACAGTGGGTTTTTTTTCCTTCTAATTTTCTCTTTTTTGTTGTTGGTGTTTTTACTCAACATTTTTATTTCAGCTGTGATGAAAAAGGACAAATATTTAAACATGTTTTTTTTTTTGTTTTCATATTTTTTTGGTGGGGTTATGGTTTTCTTGAGTTTCATTTCATTTCATTTCTCTCTAGTTTTTTTTTTTTTGTTGGTACAAATAACTTCAAAAAAAGTGAATGGTTGTTGGAATCTCACTTCAAACATATATAATTTGAGGTGGTATGGTATAAAGTACGTACGTGCTTTTATATAATCCAATTAGATTAGATTATTTAGCAAATGAATATGTTGGTGTGGACTTGCTTTTTGATTTTGTTTTGATCAGATTGATTAATTAATTATGAAGGTTCTAATCAAGATTTGATGGATTATGGGATCTGGTTGTATATATGTGATTAGGTTGAAAACGAAGAAGACAAATCTAAAGAGACAGAGAGAACCAAGATTTGCTTTCATGACAAAAAGCGAGGTTGATCATCTGGAAGATGGATACCGATGGAGAAAGTACGGTCAAAAAGCTGTCAAAAATAGCCCTTTTCCAAGGTACTACTCATAAAAATTCTTTGAGTTCACACTCTTTTGGTTTAATTAATTTAGATTTTAGACCCAAAATCATTAGTAAACTGTAACATTTGTAATATGCTATGTGTTTATGTTTGTGTAGGAGCTACTATCGTTGCACCACTGCTTCATGTAATGTCAAGAAACGTGTGGAACGTTCTTACACTGATCCAAGCATTGTAGTCACAACATATGAAGGCCAACACACACATCCAAGTCCAACTATGTCCCGTTCCGCCTTTGCCGGAGTTCAAATACCACCACCCGCCGGTGTAGTCTCGGGTGGATTTCCAGCTACTAACTTTGGTTCAGTTTTGCAAGGAAACTACTTATCACAATATCATCAACAACCCTATCAACATCAACAACTACTTGTTAATACATTGTCCTCTTTGAATCACCCTTATAACAATTCTTCATCATTCAATAATTCACCTTTTACTGCCCAAGAGAGAGTACAGCTTTGTAATCAAGGGACAACTGCATTTCTTAGGGATAATGGGCTACTTCAGGATGTTGTTCCTTCACATATGTTGAAAGAAGAGTAG
Protein sequence

>MS.gene005502.t1

MEKKEMGVSVKSEDVIVDSSSSLLNGYQFSSVFDFCEVERSSSLGFMELLGGQDYTPLLDVPTMSAVTHNHNTVKSSSEKECSEVLNQQQPATPNSCSISSASSEAVNDNKIVVNQAEEDEEEEEKQKTNKQLKTKKTNLKRQREPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTTASCNVKKRVERSYTDPSIVVTTYEGQHTHPSPTMSRSAFAGVQIPPPAGVVSGGFPATNFGSVLQGNYLSQYHQQPYQHQQLLVNTLSSLNHPYNNSSSFNNSPFTAQERVQLCNQGTTAFLRDNGLLQDVVPSHMLKEE