AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene005523

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene005523.t1 MTR_1g087140 96.011 1103 39 4 7 1105 1 1102 0.0 2178
MS.gene005523.t1 MTR_1g090850 61.706 1102 348 20 10 1096 3 1045 0.0 1223
MS.gene005523.t1 MTR_8g075340 29.167 552 340 17 148 674 210 735 2.75e-42 169
MS.gene005523.t1 MTR_8g075340 31.658 199 111 7 912 1087 957 1153 8.15e-17 86.7
MS.gene005523.t1 MTR_5g022470 28.086 559 330 16 152 674 251 773 2.34e-41 166
MS.gene005523.t1 MTR_5g022470 34.483 145 71 4 966 1087 1040 1183 4.42e-16 84.3
MS.gene005523.t1 MTR_5g022470 33.690 374 228 9 303 674 418 773 2.39e-41 166
MS.gene005523.t1 MTR_8g019680 64.948 97 29 2 1002 1096 53 146 9.57e-36 133
MS.gene005523.t1 MTR_3g085130 28.261 414 236 15 299 678 134 520 6.96e-31 131
MS.gene005523.t1 MTR_3g085130 33.577 137 68 6 973 1097 693 818 3.88e-14 77.8
MS.gene005523.t1 MTR_8g080770 28.079 406 223 12 383 770 272 626 2.82e-30 129
MS.gene005523.t1 MTR_8g080770 32.609 138 69 6 973 1097 729 855 1.76e-13 75.5
MS.gene005523.t1 MTR_3g085130 28.019 414 237 15 299 678 344 730 5.47e-30 129
MS.gene005523.t1 MTR_3g085130 32.716 162 83 8 948 1097 881 1028 4.21e-14 77.8
MS.gene005523.t1 MTR_8g080770 28.079 406 223 12 383 770 381 735 6.30e-30 129
MS.gene005523.t1 MTR_8g080770 32.609 138 69 6 973 1097 838 964 1.78e-13 75.5
MS.gene005523.t1 MTR_5g097410 26.796 362 209 13 351 685 576 908 1.54e-23 108
MS.gene005523.t1 MTR_5g097410 33.333 150 62 7 976 1099 1074 1211 2.18e-12 72.4
MS.gene005523.t1 MTR_8g106150 27.078 373 216 10 351 684 97 452 9.39e-22 102
MS.gene005523.t1 MTR_8g106150 33.775 151 75 5 964 1097 606 748 6.36e-15 80.1
MS.gene005523.t1 MTR_8g106150 26.121 379 212 10 351 684 340 695 1.05e-21 102
MS.gene005523.t1 MTR_8g106150 33.775 151 75 5 964 1097 849 991 8.98e-15 79.7
MS.gene005523.t1 MTR_3g105590 29.762 336 179 14 367 669 335 646 4.99e-20 97.1
MS.gene005523.t1 MTR_4g031150 26.503 366 205 11 364 708 359 681 1.38e-18 92.0
MS.gene005523.t1 MTR_1g013360 25.753 365 204 12 399 713 381 728 6.65e-17 86.7
MS.gene005523.t1 MTR_7g109150 27.273 242 140 6 454 690 393 603 1.04e-15 82.4
MS.gene005523.t1 MTR_8g063580 36.496 137 61 6 979 1102 15 138 7.07e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene005523.t1 AT2G47430 38.004 1142 623 25 11 1101 12 1119 0.0 673
MS.gene005523.t1 AT2G17820 27.563 595 380 17 103 674 196 762 1.67e-44 176
MS.gene005523.t1 AT2G17820 31.250 208 104 7 918 1096 995 1192 1.21e-16 86.3
MS.gene005523.t1 AT1G27320 27.723 404 224 12 380 769 436 785 6.34e-31 132
MS.gene005523.t1 AT1G27320 29.221 154 75 5 973 1102 887 1030 1.14e-11 69.7
MS.gene005523.t1 AT2G01830 28.610 367 216 12 338 677 415 762 4.06e-29 126
MS.gene005523.t1 AT2G01830 37.037 135 67 4 973 1097 942 1068 7.05e-16 83.6
MS.gene005523.t1 AT2G01830 27.869 366 220 11 338 677 392 739 4.88e-29 126
MS.gene005523.t1 AT2G01830 37.500 136 65 5 973 1097 919 1045 7.03e-16 83.6
MS.gene005523.t1 AT2G01830 27.869 366 220 11 338 677 392 739 4.88e-29 126
MS.gene005523.t1 AT2G01830 37.500 136 65 5 973 1097 919 1045 7.03e-16 83.6
MS.gene005523.t1 AT2G01830 27.869 366 220 11 338 677 392 739 4.88e-29 126
MS.gene005523.t1 AT2G01830 37.500 136 65 5 973 1097 919 1045 7.03e-16 83.6
MS.gene005523.t1 AT2G01830 27.869 366 220 11 338 677 392 739 4.88e-29 126
MS.gene005523.t1 AT2G01830 37.500 136 65 5 973 1097 919 1045 7.03e-16 83.6
MS.gene005523.t1 AT2G01830 27.869 366 220 11 338 677 404 751 5.33e-29 126
MS.gene005523.t1 AT2G01830 35.762 151 73 6 962 1097 916 1057 7.57e-16 83.6
MS.gene005523.t1 AT5G35750 27.322 366 198 14 346 680 544 872 3.34e-25 114
MS.gene005523.t1 AT5G35750 31.544 149 68 5 973 1097 1032 1170 9.76e-12 70.1
MS.gene005523.t1 AT1G66340 28.481 316 175 10 378 686 323 594 5.06e-19 93.6
MS.gene005523.t1 AT5G10720 30.037 273 154 11 399 669 371 608 3.56e-18 90.9
MS.gene005523.t1 AT2G40940 29.333 225 123 6 457 676 395 588 5.08e-15 80.1

Find 202 sgRNAs with CRISPR-Local

Find 366 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCTTATGATTATATCTTAA+TGG 0.123404 1.1:-64594492 MS.gene005523:CDS
TTGCTACCCCATTGATATTA+TGG 0.146001 1.1:-64598684 MS.gene005523:CDS
TGTGATCTTAATTCATTTCT+TGG 0.147327 1.1:+64594824 None:intergenic
GCTTATCTTGCAGGCCTTAT+TGG 0.151594 1.1:-64597706 MS.gene005523:CDS
GATAGTGTTGTTAGATATTA+TGG 0.179176 1.1:+64599105 None:intergenic
AGGTGACATTAGTAGAATTA+AGG 0.196080 1.1:+64599632 None:intergenic
ATTGATGCAAGTTGGATAAA+TGG 0.240438 1.1:-64599079 MS.gene005523:CDS
AGTTGTTACTAATTCAAAAT+TGG 0.240702 1.1:-64597659 MS.gene005523:CDS
GTTTCAATTCAAGCTGTTAA+TGG 0.241296 1.1:-64598803 MS.gene005523:CDS
GATGGAAAAGTTATTGTAAA+AGG 0.243895 1.1:-64598863 MS.gene005523:CDS
TCAAGGGACAAAATCATATT+TGG 0.248361 1.1:-64598894 MS.gene005523:CDS
TTCCTGAGTTTGGTGGTAAT+TGG 0.250834 1.1:-64594865 MS.gene005523:CDS
TTCTGAACTTGGTTTCAAAT+TGG 0.254047 1.1:+64597633 None:intergenic
ACTGACTTGTGATTCTCTTT+AGG 0.274643 1.1:+64596919 None:intergenic
TTCACATGAATTTGCATCAT+TGG 0.275818 1.1:-64599044 MS.gene005523:CDS
CACAGGTTGGATATAGTATA+TGG 0.279878 1.1:+64599159 None:intergenic
AGCAAAAGCAAGACTCTTAT+TGG 0.282452 1.1:+64597750 None:intergenic
GATCTTCGTGCTTATCTTGC+AGG 0.288028 1.1:-64597715 MS.gene005523:CDS
ATTAGTAACAACTAATTTAG+AGG 0.290279 1.1:+64597669 None:intergenic
TTCTTTCCACTTAATGGTTT+AGG 0.294905 1.1:+64594665 None:intergenic
AGTAAATGCTCTTTCTTGAT+AGG 0.295947 1.1:+64594203 None:intergenic
TTTGAAACCAAGTTCAGAAT+TGG 0.304813 1.1:-64597629 MS.gene005523:CDS
TGCTACCCCATTGATATTAT+GGG 0.314042 1.1:-64598683 MS.gene005523:CDS
TATCATCTTGATCAATTGTT+TGG 0.315298 1.1:+64594942 None:intergenic
GTGTTAGCTGTCCCACAAAA+TGG 0.319563 1.1:-64597961 MS.gene005523:CDS
ATTAGGCTTCTTCCTGAGTT+TGG 0.323273 1.1:-64594875 MS.gene005523:CDS
TTCATCTTTCATGATCTTGC+TGG 0.339861 1.1:-64600029 MS.gene005523:intron
ATGATTTACCTAGCAAATCT+TGG 0.341823 1.1:+64597575 None:intergenic
GCTGTTAAATTTACTGATGA+AGG 0.355175 1.1:-64597144 MS.gene005523:CDS
GGTGACATTAGTAGAATTAA+GGG 0.356467 1.1:+64599633 None:intergenic
ATTCAAGCTGTTAATGGTAA+TGG 0.357123 1.1:-64598797 MS.gene005523:CDS
GTAGATTGTTCCAAGTCATT+AGG 0.359195 1.1:-64594892 MS.gene005523:CDS
TCCAACCAAACAACTTTACT+AGG 0.359940 1.1:+64594992 None:intergenic
GTGATATCAAAACCATTTCA+TGG 0.361788 1.1:-64594917 MS.gene005523:CDS
CCAACAAGATCCATGTCTTA+TGG 0.374116 1.1:-64596980 MS.gene005523:CDS
ACAATTCGTACTGCTAGTTC+TGG 0.375945 1.1:-64595472 MS.gene005523:CDS
ATGCTCTTTCTTGATAGGTT+TGG 0.386579 1.1:+64594208 None:intergenic
ACACCTTTCTTCATTGCCAT+TGG 0.389100 1.1:+64597270 None:intergenic
GAGACAGTGAATTATGAGTA+TGG 0.390792 1.1:-64595538 MS.gene005523:CDS
TCACATGAATTTGCATCATT+GGG 0.392411 1.1:-64599043 MS.gene005523:CDS
TCAATCCTAGTAAAGTTGTT+TGG 0.399703 1.1:-64594997 MS.gene005523:CDS
TAGACACACACTTTCATCAT+TGG 0.402470 1.1:+64594793 None:intergenic
TTCTATTCCCATAATATCAA+TGG 0.403961 1.1:+64598676 None:intergenic
GTAGGAACTGGCTTGGGACT+TGG 0.405420 1.1:-64596853 MS.gene005523:CDS
GAGGGGCTAACATGGAGTTT+TGG 0.406382 1.1:+64595427 None:intergenic
AGTCTTCGGAGATGAGTTCT+AGG 0.419954 1.1:-64595216 MS.gene005523:CDS
CCACAATACTCAATGAATAC+TGG 0.420899 1.1:-64600076 None:intergenic
ATCTTACAAAGCTTAGAAAA+TGG 0.421080 1.1:+64595046 None:intergenic
AACAATCTACTACCATGAAA+TGG 0.422179 1.1:+64594905 None:intergenic
ACATTTCAATCAAACCAATA+AGG 0.422617 1.1:+64597692 None:intergenic
CAGTTGTTCATAGAGAGCTT+AGG 0.425096 1.1:-64595340 MS.gene005523:CDS
TTTGTTGATGATGATTTCAT+TGG 0.427329 1.1:+64599679 None:intergenic
TCATATTTGGCTACCAAAGA+TGG 0.429385 1.1:-64598881 MS.gene005523:CDS
ATGGCTACTTTGAGATCTCT+TGG 0.429609 1.1:-64594599 MS.gene005523:CDS
TTATATCTTAATGGATTGTC+AGG 0.430305 1.1:-64594483 MS.gene005523:intron
CCATAAGACATGGATCTTGT+TGG 0.432881 1.1:+64596980 None:intergenic
AGTTGTTCATAGAGAGCTTA+GGG 0.434205 1.1:-64595339 MS.gene005523:CDS
TCCTAGTAAAGTTGTTTGGT+TGG 0.434623 1.1:-64594993 MS.gene005523:CDS
TTGGTCTCCAATTCTGAACT+TGG 0.436377 1.1:+64597622 None:intergenic
TCTATTCCCATAATATCAAT+GGG 0.437409 1.1:+64598677 None:intergenic
GAAAGGTGTAGAAGTTGTAT+TGG 0.437547 1.1:-64597256 MS.gene005523:CDS
CATAAGACATGGATCTTGTT+GGG 0.439105 1.1:+64596981 None:intergenic
GACAAGCTGACCACTGAGAC+TGG 0.440049 1.1:-64594248 MS.gene005523:CDS
AAGAGTTCCTTTCAAAGCTA+TGG 0.440702 1.1:-64595164 MS.gene005523:CDS
CCTTTCAAAGCTATGGATCA+TGG 0.441919 1.1:-64595157 MS.gene005523:CDS
TCAAAGTTCACCGGAGTCTT+CGG 0.442260 1.1:-64595230 MS.gene005523:CDS
AATCCAAGTCATAAAGAAAA+GGG 0.444621 1.1:-64597925 MS.gene005523:CDS
CACTGTCTCATTCTCACATA+AGG 0.445103 1.1:+64595552 None:intergenic
TCTGTTGGCCAAGTAGGAAC+TGG 0.448175 1.1:-64596865 MS.gene005523:CDS
GGAGACCAACTTAAAACAAA+TGG 0.449087 1.1:-64597608 MS.gene005523:CDS
TAATCCAAGTCATAAAGAAA+AGG 0.450153 1.1:-64597926 MS.gene005523:CDS
AACACTCTTGCGGTTAGACT+TGG 0.450386 1.1:+64597074 None:intergenic
TGTATTTGAAGTGGATGATA+CGG 0.450635 1.1:-64596953 MS.gene005523:CDS
ATTATCATTGATGCAAATGC+AGG 0.450739 1.1:-64595070 MS.gene005523:CDS
GTATTTGAAGTGGATGATAC+GGG 0.451935 1.1:-64596952 MS.gene005523:CDS
TGCATCACTCATACAACAAA+AGG 0.453967 1.1:-64597803 MS.gene005523:CDS
TATGTTAATCTGGGAAGAAA+AGG 0.456024 1.1:-64594734 MS.gene005523:CDS
ATGGTAATGGAGATCTAATA+AGG 0.458097 1.1:-64598784 MS.gene005523:CDS
GTTGTGTTATTGTAGGCATA+TGG 0.458179 1.1:-64599841 MS.gene005523:intron
GCCTCAAACCCATCCTTCAC+TGG 0.462390 1.1:+64594344 None:intergenic
GTCCCAAGCCAGTTCCTACT+TGG 0.464624 1.1:+64596857 None:intergenic
TAGGAACTGGCTTGGGACTT+GGG 0.466445 1.1:-64596852 MS.gene005523:CDS
GGCCAAGTAGGAACTGGCTT+GGG 0.467713 1.1:-64596859 MS.gene005523:CDS
AGGCTTCTTCCTGAGTTTGG+TGG 0.470450 1.1:-64594872 MS.gene005523:CDS
GAGAATTCTGTTGGCCAAGT+AGG 0.471261 1.1:-64596871 MS.gene005523:CDS
AGAATAGGAGGGGTCTCTCT+TGG 0.472858 1.1:-64598965 MS.gene005523:CDS
GAAAATAGTGACATAATGTA+AGG 0.473865 1.1:-64594161 None:intergenic
GTTGTATTGGACTCTTGTAA+TGG 0.481853 1.1:-64597243 MS.gene005523:CDS
TGATATTATGGGAATAGAAT+CGG 0.482331 1.1:-64598672 MS.gene005523:intron
GCCTCTGAGAGGGGCTAACA+TGG 0.484367 1.1:+64595419 None:intergenic
ACTTGGGATTGTGCAGTCAT+TGG 0.486079 1.1:-64596836 MS.gene005523:intron
TCCATTAAGATATAATCATA+AGG 0.487002 1.1:+64594491 None:intergenic
TCAGCTAGAATCAACAGAAT+AGG 0.488864 1.1:-64598980 MS.gene005523:CDS
AGCAATCCTAAACCATTAAG+TGG 0.490150 1.1:-64594671 MS.gene005523:CDS
GCCAGTGAAGGATGGGTTTG+AGG 0.491157 1.1:-64594345 MS.gene005523:CDS
TCTTGATAGGTTTGGTAATG+TGG 0.491525 1.1:+64594216 None:intergenic
TAATCAACACTACTCTCAAA+AGG 0.491934 1.1:+64594965 None:intergenic
TGATTTACCTAGCAAATCTT+GGG 0.494105 1.1:+64597576 None:intergenic
ATTCACGTGTGAAAGGTGAT+AGG 0.495625 1.1:-64597206 MS.gene005523:CDS
TTCAATGCTTGAAATAATAA+CGG 0.495873 1.1:+64599310 None:intergenic
GGTATTGTGGACAAGGAAGT+TGG 0.498320 1.1:-64595613 MS.gene005523:CDS
TTGACACAAATCTCATACAT+AGG 0.498626 1.1:-64599274 MS.gene005523:CDS
CAAGATAAGCACGAAGATCA+TGG 0.500470 1.1:+64597719 None:intergenic
CAGGAAGAAGCCTAATGACT+TGG 0.500658 1.1:+64594882 None:intergenic
AGGAGGATTAGTAAAATCCT+TGG 0.504201 1.1:+64594511 None:intergenic
TTCTAGGTACGTTTGATGCA+TGG 0.504400 1.1:-64595643 MS.gene005523:intron
TATGCTGAGAAAGATTTGTA+TGG 0.505750 1.1:-64594618 MS.gene005523:CDS
ATTCCAGTGTCATGGTTCAC+AGG 0.507966 1.1:+64599142 None:intergenic
CAGTGTCATGGTTCACAGGT+TGG 0.508152 1.1:+64599146 None:intergenic
GACAGATGCCAGTGAAGGAT+GGG 0.510140 1.1:-64594352 MS.gene005523:intron
CCATGATCCATAGCTTTGAA+AGG 0.512640 1.1:+64595157 None:intergenic
AATGAATACTGGTTTATCAA+TGG 0.512649 1.1:-64600065 MS.gene005523:CDS
CTTTCTTCATTGCCATTGGA+TGG 0.517203 1.1:+64597274 None:intergenic
GACAAGGAAGTTGGCAAAAG+AGG 0.518131 1.1:-64595604 MS.gene005523:CDS
ATGATAATCAAAACAAAACT+TGG 0.518308 1.1:+64595085 None:intergenic
CATCCAATGGCAATGAAGAA+AGG 0.522261 1.1:-64597273 MS.gene005523:CDS
CTATCAATATTGATGCAAGT+TGG 0.529019 1.1:-64599087 MS.gene005523:CDS
CGTTTGATGCATGGAGACAT+TGG 0.531016 1.1:-64595634 MS.gene005523:CDS
GGACAGATGCCAGTGAAGGA+TGG 0.536750 1.1:-64594353 MS.gene005523:intron
GAGCTTAGGGATTAAAGTCA+AGG 0.538142 1.1:-64595326 MS.gene005523:CDS
GAAGGCTCAGGCCTCTGAGA+GGG 0.538284 1.1:+64595409 None:intergenic
AATTGTGCCCAAGATTTGCT+AGG 0.541010 1.1:-64597583 MS.gene005523:intron
GACAATGCGAGTGATATAAT+CGG 0.541959 1.1:+64598922 None:intergenic
CTTTCTCTCAGCTTGTTCTG+TGG 0.542457 1.1:+64597777 None:intergenic
ATCTCATACATAGGAATGGA+AGG 0.542582 1.1:-64599265 MS.gene005523:CDS
TATGAGTATGGATCAACCTC+AGG 0.543399 1.1:-64595526 MS.gene005523:CDS
GAAGTGGATGATACGGGGAA+AGG 0.545761 1.1:-64596946 MS.gene005523:CDS
CATTCTTTACATTACTGATG+AGG 0.545789 1.1:-64595380 MS.gene005523:CDS
CTCGCATTGTCGATCGTCAA+GGG 0.547004 1.1:-64598910 MS.gene005523:CDS
CAAGTCAAAGAGAATTCTGT+TGG 0.549468 1.1:-64596880 MS.gene005523:CDS
CAAGGTGAAATAGAAGAAAG+TGG 0.553365 1.1:-64594701 MS.gene005523:CDS
GCTAGAATCAACAGAATAGG+AGG 0.555811 1.1:-64598977 MS.gene005523:CDS
GACACAAGCAAGATTGAGGC+AGG 0.556358 1.1:-64597363 MS.gene005523:CDS
TGTACTCTAACTCATCTAGT+GGG 0.561197 1.1:-64599198 MS.gene005523:CDS
ACTATTGACCAATGTGAGAA+TGG 0.561890 1.1:-64594569 MS.gene005523:CDS
AGAGAGATGGAGAAACACTA+TGG 0.561980 1.1:-64594308 MS.gene005523:CDS
ATCAAACATTCACGTGTGAA+AGG 0.562833 1.1:-64597213 MS.gene005523:CDS
ACAAATCTCATACATAGGAA+TGG 0.563392 1.1:-64599269 MS.gene005523:CDS
AGCAAGATCATGAAAGATGA+AGG 0.564158 1.1:+64600031 None:intergenic
GGAGATCTAATAAGGAATGC+GGG 0.566004 1.1:-64598776 MS.gene005523:CDS
CTGTTAAATTTACTGATGAA+GGG 0.567152 1.1:-64597143 MS.gene005523:CDS
GACACCATGTTGGTATCTCA+TGG 0.568120 1.1:-64599794 MS.gene005523:CDS
TGGCCAAGTAGGAACTGGCT+TGG 0.570068 1.1:-64596860 MS.gene005523:CDS
AGGATGGGTTTGAGGCAACA+AGG 0.571342 1.1:-64594337 MS.gene005523:CDS
ACTCGCATTGTCGATCGTCA+AGG 0.572216 1.1:-64598911 MS.gene005523:CDS
ATGTAAAGAATGACATGTGA+AGG 0.573120 1.1:+64595391 None:intergenic
TCTTGCAAGGATCAAGCTGT+TGG 0.574460 1.1:-64598746 MS.gene005523:CDS
CACACACTTTCATCATTGGA+AGG 0.574607 1.1:+64594797 None:intergenic
GTGTTATGAAACATTTGTCT+TGG 0.576661 1.1:-64597056 MS.gene005523:CDS
GGCTGTGAGAACTGTTCAAG+AGG 0.577188 1.1:-64594540 MS.gene005523:CDS
GCTGACCACTGAGACTGGAA+TGG 0.584171 1.1:-64594243 MS.gene005523:CDS
AGTTGATTTGTACCATCCAA+TGG 0.585418 1.1:-64597286 MS.gene005523:CDS
ACTTGACACAAGCAAGATTG+AGG 0.587753 1.1:-64597367 MS.gene005523:CDS
TATCAGTGATCAAAGTTCAC+CGG 0.592353 1.1:-64595239 MS.gene005523:CDS
TTGCCTCATTGACACCATGT+TGG 0.593071 1.1:-64599804 MS.gene005523:CDS
AAGTGTGGAACAATGTTGGA+AGG 0.593740 1.1:-64594771 MS.gene005523:CDS
GCATGGAGACATTGGTATTG+TGG 0.595262 1.1:-64595626 MS.gene005523:CDS
TGCGGGAGCTGTATCTTGCA+AGG 0.595402 1.1:-64598759 MS.gene005523:CDS
AGAAAAGGTTCTGTTCATCA+AGG 0.596627 1.1:-64594719 MS.gene005523:CDS
CCTCTTCACCATTCTCACAT+TGG 0.597986 1.1:+64594561 None:intergenic
ATACAAATCTTTCTCAGCAT+AGG 0.598094 1.1:+64594620 None:intergenic
GGCACATAACAGTTAGAGCA+TGG 0.600016 1.1:-64597122 MS.gene005523:CDS
TGATTTATCCTCTCTCCTTG+AGG 0.602251 1.1:-64597313 MS.gene005523:CDS
AAGGCTCAGGCCTCTGAGAG+GGG 0.603713 1.1:+64595410 None:intergenic
ATCCAATTACCACCAAACTC+AGG 0.607344 1.1:+64594863 None:intergenic
AGAATGACATGTGAAGGCTC+AGG 0.609075 1.1:+64595397 None:intergenic
AACAAGGGAGATAAGAGAGA+TGG 0.610075 1.1:-64594321 MS.gene005523:CDS
GTCTAAGTGTGGAACAATGT+TGG 0.612167 1.1:-64594775 MS.gene005523:CDS
ATGTACTCTAACTCATCTAG+TGG 0.614715 1.1:-64599199 MS.gene005523:CDS
GAACTCATCTCCGAAGACTC+CGG 0.615301 1.1:+64595220 None:intergenic
CAACCTGTGAACCATGACAC+TGG 0.615905 1.1:-64599145 MS.gene005523:CDS
TGGAGATCTAATAAGGAATG+CGG 0.616152 1.1:-64598777 MS.gene005523:CDS
AACTACATCCTCAAGGAGAG+AGG 0.617424 1.1:+64597305 None:intergenic
AGACATTGGTATTGTGGACA+AGG 0.619613 1.1:-64595620 MS.gene005523:CDS
TGTTCAAGAGGGTTTAACCA+AGG 0.619844 1.1:-64594528 MS.gene005523:CDS
GGATGGGTTTGAGGCAACAA+GGG 0.621462 1.1:-64594336 MS.gene005523:CDS
GTACTCTAACTCATCTAGTG+GGG 0.623166 1.1:-64599197 MS.gene005523:CDS
TATTTGAAGTGGATGATACG+GGG 0.631939 1.1:-64596951 MS.gene005523:CDS
AACATGGTGTCAATGAGGCA+AGG 0.632743 1.1:+64599806 None:intergenic
AGTGTGGAACAATGTTGGAA+GGG 0.632865 1.1:-64594770 MS.gene005523:CDS
CTAGAATCAACAGAATAGGA+GGG 0.634091 1.1:-64598976 MS.gene005523:CDS
AGTTAGAGCATGGACTCAGA+AGG 0.635220 1.1:-64597112 MS.gene005523:CDS
ACAAATCAACTACATCCTCA+AGG 0.638614 1.1:+64597298 None:intergenic
AATACAAAATCCATAAGACA+TGG 0.641986 1.1:+64596970 None:intergenic
GCTGTGAGAACTGTTCAAGA+GGG 0.647146 1.1:-64594539 MS.gene005523:CDS
TACTCTAACTCATCTAGTGG+GGG 0.650632 1.1:-64599196 MS.gene005523:CDS
CTTGGTGTGAACATCAGAGA+AGG 0.651051 1.1:+64599612 None:intergenic
AATGTTTCATAACACTCTTG+CGG 0.652693 1.1:+64597064 None:intergenic
CCAATGTGAGAATGGTGAAG+AGG 0.657628 1.1:-64594561 MS.gene005523:CDS
TGAAGGCTCAGGCCTCTGAG+AGG 0.658399 1.1:+64595408 None:intergenic
TGAAAGTGTGTGTCTAAGTG+TGG 0.660501 1.1:-64594786 MS.gene005523:CDS
TGTGAACCATGACACTGGAA+TGG 0.664217 1.1:-64599140 MS.gene005523:CDS
ATACCAACATGGTGTCAATG+AGG 0.665423 1.1:+64599801 None:intergenic
ATTAAGATATAATCATAAGG+AGG 0.668188 1.1:+64594494 None:intergenic
AATTGGACAGATGCCAGTGA+AGG 0.672213 1.1:-64594357 MS.gene005523:intron
TATGAGATTTGTGTCAAGTG+AGG 0.675612 1.1:+64599280 None:intergenic
GAAATCCATTCCAGTCTCAG+TGG 0.681772 1.1:+64594238 None:intergenic
TAGAATCAACAGAATAGGAG+GGG 0.688378 1.1:-64598975 MS.gene005523:CDS
TCCATGTTAGCCCCTCTCAG+AGG 0.694979 1.1:-64595420 MS.gene005523:CDS
CTTCTCTGATGTTCACACCA+AGG 0.706528 1.1:-64599611 MS.gene005523:intron
CTATTCCCATAATATCAATG+GGG 0.765530 1.1:+64598678 None:intergenic
GTGACCATGAGATACCAACA+TGG 0.814649 1.1:+64599790 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAGTAGTAAAATTATTTTT+TGG + chr1.1:64595721-64595740 None:intergenic 10.0%
!!! AAGTAGTAAAATTATTTTTT+GGG + chr1.1:64595720-64595739 None:intergenic 10.0%
!!! TGTATTTGATTTTTTTTTTA+TGG + chr1.1:64595914-64595933 None:intergenic 10.0%
!! AAATATCTTTGTATCTTTAA+TGG - chr1.1:64594865-64594884 MS.gene005523:CDS 15.0%
!! AGTAAAGTAAAATTGTTAAA+TGG - chr1.1:64598557-64598576 MS.gene005523:intron 15.0%
!! ATAAGCAAACAAAATATTTA+TGG + chr1.1:64594675-64594694 None:intergenic 15.0%
!! TATCATTAAAAATCATCAAA+CGG + chr1.1:64595402-64595421 None:intergenic 15.0%
!!! AAAATATTTATGGTTTTGAA+GGG + chr1.1:64594665-64594684 None:intergenic 15.0%
!!! AACTAATTTTATTAAATGTC+AGG - chr1.1:64596238-64596257 MS.gene005523:intron 15.0%
!!! AATTGTTAATTTTTTCTCTA+GGG + chr1.1:64598741-64598760 None:intergenic 15.0%
!!! ATAACTTAAGCTTTATATTT+TGG - chr1.1:64599821-64599840 MS.gene005523:CDS 15.0%
!!! GATTTTTTTTACAACTAAAA+GGG + chr1.1:64598533-64598552 None:intergenic 15.0%
!!! GTGTTAAATTTTCAAATTAT+GGG + chr1.1:64596010-64596029 None:intergenic 15.0%
!!! TGATTTTTTTTACAACTAAA+AGG + chr1.1:64598534-64598553 None:intergenic 15.0%
!!! TGTGTTAAATTTTCAAATTA+TGG + chr1.1:64596011-64596030 None:intergenic 15.0%
!!! TTTTATTTTGTTACAATCTT+AGG - chr1.1:64596822-64596841 MS.gene005523:intron 15.0%
!! AAGAAGATCAAAAAAGAAAA+GGG - chr1.1:64598959-64598978 MS.gene005523:CDS 20.0%
!! AGTTCATATATGATATACAA+AGG - chr1.1:64598350-64598369 MS.gene005523:intron 20.0%
!! AGTTGTTACTAATTCAAAAT+TGG - chr1.1:64596568-64596587 MS.gene005523:intron 20.0%
!! ATGATAATCAAAACAAAACT+TGG + chr1.1:64599145-64599164 None:intergenic 20.0%
!! ATTAAGATATAATCATAAGG+AGG + chr1.1:64599736-64599755 None:intergenic 20.0%
!! ATTAGTAACAACTAATTTAG+AGG + chr1.1:64596561-64596580 None:intergenic 20.0%
!! GTTAGTTAATATACTACTAT+TGG + chr1.1:64595644-64595663 None:intergenic 20.0%
!! TCCATTAAGATATAATCATA+AGG + chr1.1:64599739-64599758 None:intergenic 20.0%
!! TCCTTATGATTATATCTTAA+TGG - chr1.1:64599735-64599754 MS.gene005523:CDS 20.0%
!! TTAAGATTCAAATCATGAAT+TGG + chr1.1:64598489-64598508 None:intergenic 20.0%
!! TTAATTTATTTGCACTTTGT+AGG - chr1.1:64594889-64594908 MS.gene005523:CDS 20.0%
!! TTATGGAATGTGTTTATAAA+CGG + chr1.1:64595897-64595916 None:intergenic 20.0%
!! TTCAATGCTTGAAATAATAA+CGG + chr1.1:64594920-64594939 None:intergenic 20.0%
!! TTGTACTAAATAGTATATCA+CGG + chr1.1:64596761-64596780 None:intergenic 20.0%
!!! AAAGTACTATTTGGTATTTT+CGG + chr1.1:64595694-64595713 None:intergenic 20.0%
!!! ATTATCCATTTGTTTTAAGT+TGG + chr1.1:64596627-64596646 None:intergenic 20.0%
!!! ATTATTTGTTGTGTTATTGT+AGG - chr1.1:64594379-64594398 MS.gene005523:intron 20.0%
!!! ATTGTTAAATGGTTTTTTCT+AGG - chr1.1:64598568-64598587 MS.gene005523:intron 20.0%
!!! CAAAATATTTATGGTTTTGA+AGG + chr1.1:64594666-64594685 None:intergenic 20.0%
!!! GAATTGTTAATTTTTTCTCT+AGG + chr1.1:64598742-64598761 None:intergenic 20.0%
!!! TAATGTAGTTAACAACTTTT+TGG - chr1.1:64598258-64598277 MS.gene005523:intron 20.0%
!!! TCTTTGAGTTAAAACTATTA+AGG + chr1.1:64596097-64596116 None:intergenic 20.0%
! AAAAACTTCTTTCCACTTAA+TGG + chr1.1:64599571-64599590 None:intergenic 25.0%
! AAATGTTTGATCTATAAGAG+AGG + chr1.1:64597618-64597637 None:intergenic 25.0%
! AAGGGAAATTATACAAGAAA+TGG + chr1.1:64594647-64594666 None:intergenic 25.0%
! AATACAAAATCCATAAGACA+TGG + chr1.1:64597260-64597279 None:intergenic 25.0%
! AATCCAAGTCATAAAGAAAA+GGG - chr1.1:64596302-64596321 MS.gene005523:intron 25.0%
! ACAAAAATCCTATGTTAATC+TGG - chr1.1:64599483-64599502 MS.gene005523:intron 25.0%
! ACATTTCAATCAAACCAATA+AGG + chr1.1:64596538-64596557 None:intergenic 25.0%
! AGGGAAATTATACAAGAAAT+GGG + chr1.1:64594646-64594665 None:intergenic 25.0%
! ATCTTACAAAGCTTAGAAAA+TGG + chr1.1:64599184-64599203 None:intergenic 25.0%
! ATGACATTTGTGAACATATT+TGG + chr1.1:64596175-64596194 None:intergenic 25.0%
! ATGTTCAAGAAGAAAAACAA+TGG - chr1.1:64599112-64599131 MS.gene005523:CDS 25.0%
! CAAAAATCCTATGTTAATCT+GGG - chr1.1:64599484-64599503 MS.gene005523:intron 25.0%
! CAAGAAGATCAAAAAAGAAA+AGG - chr1.1:64598958-64598977 MS.gene005523:CDS 25.0%
! CTGTTAAATTTACTGATGAA+GGG - chr1.1:64597084-64597103 MS.gene005523:CDS 25.0%
! GATGGAAAAGTTATTGTAAA+AGG - chr1.1:64595364-64595383 MS.gene005523:CDS 25.0%
! TAATCCAAGTCATAAAGAAA+AGG - chr1.1:64596301-64596320 MS.gene005523:intron 25.0%
! TACAAAATATTGTTAACGAG+CGG - chr1.1:64596776-64596795 MS.gene005523:intron 25.0%
! TATCATCTTGATCAATTGTT+TGG + chr1.1:64599288-64599307 None:intergenic 25.0%
! TCTATTCCCATAATATCAAT+GGG + chr1.1:64595553-64595572 None:intergenic 25.0%
! TGATATTATGGGAATAGAAT+CGG - chr1.1:64595555-64595574 MS.gene005523:CDS 25.0%
! TGTGATCTTAATTCATTTCT+TGG + chr1.1:64599406-64599425 None:intergenic 25.0%
! TGTTTCATTAGAATGAATCA+AGG + chr1.1:64598228-64598247 None:intergenic 25.0%
! TTAGTTGTCAATTCATTTAG+AGG - chr1.1:64597480-64597499 MS.gene005523:intron 25.0%
! TTCTATTCCCATAATATCAA+TGG + chr1.1:64595554-64595573 None:intergenic 25.0%
!! AAGTACTATTTGGTATTTTC+GGG + chr1.1:64595693-64595712 None:intergenic 25.0%
!! AGAATCATATTGATTGTGTT+GGG + chr1.1:64598158-64598177 None:intergenic 25.0%
!! AGTTTTCTATTCTTGAATGT+TGG - chr1.1:64596374-64596393 MS.gene005523:intron 25.0%
!! ATTAAGTGGAAAGAAGTTTT+TGG - chr1.1:64599570-64599589 MS.gene005523:intron 25.0%
!! GATAGTGTTGTTAGATATTA+TGG + chr1.1:64595125-64595144 None:intergenic 25.0%
!! TACAATAACTTTTCCATCTT+TGG + chr1.1:64595362-64595381 None:intergenic 25.0%
!! TATGGATTTTGTATTTGAAG+TGG - chr1.1:64597265-64597284 MS.gene005523:CDS 25.0%
!! TTAACTTTTCCACAATGAAT+TGG - chr1.1:64599853-64599872 MS.gene005523:intron 25.0%
!!! TTAATTTTTTCTCTAGGGTT+TGG + chr1.1:64598736-64598755 None:intergenic 25.0%
!!! TTATATCTTAATGGATTGTC+AGG - chr1.1:64599744-64599763 MS.gene005523:CDS 25.0%
!!! TTTGTTGATGATGATTTCAT+TGG + chr1.1:64594551-64594570 None:intergenic 25.0%
!!! TTTTTTTACAACTAAAAGGG+AGG + chr1.1:64598530-64598549 None:intergenic 25.0%
AAAGACAAAAGAGAAGTGAT+TGG + chr1.1:64598298-64598317 None:intergenic 30.0%
AACAATCTACTACCATGAAA+TGG + chr1.1:64599325-64599344 None:intergenic 30.0%
AATGTTTCATAACACTCTTG+CGG + chr1.1:64597166-64597185 None:intergenic 30.0%
ACAAATCTCATACATAGGAA+TGG - chr1.1:64594958-64594977 MS.gene005523:CDS 30.0%
AGGTGACATTAGTAGAATTA+AGG + chr1.1:64594598-64594617 None:intergenic 30.0%
AGTAAATGCTCTTTCTTGAT+AGG + chr1.1:64600027-64600046 None:intergenic 30.0%
ATACAAATCTTTCTCAGCAT+AGG + chr1.1:64599610-64599629 None:intergenic 30.0%
ATGATTTACCTAGCAAATCT+TGG + chr1.1:64596655-64596674 None:intergenic 30.0%
ATGTAAAGAATGACATGTGA+AGG + chr1.1:64598839-64598858 None:intergenic 30.0%
ATTATCATTGATGCAAATGC+AGG - chr1.1:64599157-64599176 MS.gene005523:CDS 30.0%
ATTCAAGCTGTTAATGGTAA+TGG - chr1.1:64595430-64595449 MS.gene005523:CDS 30.0%
ATTTATTTGCACTTTGTAGG+TGG - chr1.1:64594892-64594911 MS.gene005523:CDS 30.0%
CATTCTTTACATTACTGATG+AGG - chr1.1:64598847-64598866 MS.gene005523:CDS 30.0%
CCTATGAATAGGTAAAATGT+TGG + chr1.1:64598104-64598123 None:intergenic 30.0%
CTAGTGTTTGGATTAAGTAT+AGG + chr1.1:64597902-64597921 None:intergenic 30.0%
CTAGTGTTTGTATCAAGTAT+AGG + chr1.1:64597763-64597782 None:intergenic 30.0%
CTATCAATATTGATGCAAGT+TGG - chr1.1:64595140-64595159 MS.gene005523:CDS 30.0%
CTATTCCCATAATATCAATG+GGG + chr1.1:64595552-64595571 None:intergenic 30.0%
GCTACCAATGTTGTTAAATA+GGG - chr1.1:64596686-64596705 MS.gene005523:intron 30.0%
GCTGTTAAATTTACTGATGA+AGG - chr1.1:64597083-64597102 MS.gene005523:CDS 30.0%
GGTGACATTAGTAGAATTAA+GGG + chr1.1:64594597-64594616 None:intergenic 30.0%
GTGATATCAAAACCATTTCA+TGG - chr1.1:64599310-64599329 MS.gene005523:CDS 30.0%
GTGTTATGAAACATTTGTCT+TGG - chr1.1:64597171-64597190 MS.gene005523:CDS 30.0%
GTTTCAATTCAAGCTGTTAA+TGG - chr1.1:64595424-64595443 MS.gene005523:CDS 30.0%
TAATCAACACTACTCTCAAA+AGG + chr1.1:64599265-64599284 None:intergenic 30.0%
TATGCTGAGAAAGATTTGTA+TGG - chr1.1:64599609-64599628 MS.gene005523:intron 30.0%
TATGTTAATCTGGGAAGAAA+AGG - chr1.1:64599493-64599512 MS.gene005523:intron 30.0%
TCAAGGGACAAAATCATATT+TGG - chr1.1:64595333-64595352 MS.gene005523:CDS 30.0%
TCAATCCTAGTAAAGTTGTT+TGG - chr1.1:64599230-64599249 MS.gene005523:CDS 30.0%
TCACATGAATTTGCATCATT+GGG - chr1.1:64595184-64595203 MS.gene005523:CDS 30.0%
TGATTTACCTAGCAAATCTT+GGG + chr1.1:64596654-64596673 None:intergenic 30.0%
TGCTACCAATGTTGTTAAAT+AGG - chr1.1:64596685-64596704 MS.gene005523:intron 30.0%
TTCACATGAATTTGCATCAT+TGG - chr1.1:64595183-64595202 MS.gene005523:CDS 30.0%
TTCTGAACTTGGTTTCAAAT+TGG + chr1.1:64596597-64596616 None:intergenic 30.0%
TTCTTTCCACTTAATGGTTT+AGG + chr1.1:64599565-64599584 None:intergenic 30.0%
TTGACACAAATCTCATACAT+AGG - chr1.1:64594953-64594972 MS.gene005523:CDS 30.0%
TTTGCTAGGTAAATCATCAT+AGG - chr1.1:64596658-64596677 MS.gene005523:intron 30.0%
! AATCCCTTTTCTTTATGACT+TGG + chr1.1:64596308-64596327 None:intergenic 30.0%
! AGACTTGGATTTTTGCAATT+TGG + chr1.1:64597141-64597160 None:intergenic 30.0%
! ATTGATGCAAGTTGGATAAA+TGG - chr1.1:64595148-64595167 MS.gene005523:CDS 30.0%
! CACACATTTTACCCATTTAT+AGG - chr1.1:64597672-64597691 MS.gene005523:CDS 30.0%
! CCAACATTTTACCTATTCAT+AGG - chr1.1:64598101-64598120 MS.gene005523:intron 30.0%
! GAGAATCATATTGATTGTGT+TGG + chr1.1:64598159-64598178 None:intergenic 30.0%
! TGTATTTGAAGTGGATGATA+CGG - chr1.1:64597274-64597293 MS.gene005523:CDS 30.0%
! TTTGAAACCAAGTTCAGAAT+TGG - chr1.1:64596598-64596617 MS.gene005523:intron 30.0%
! TTTGGGTACAAAGTACTATT+TGG + chr1.1:64595703-64595722 None:intergenic 30.0%
! TTTTCACAAAACATCTCTCT+TGG - chr1.1:64595788-64595807 MS.gene005523:intron 30.0%
! TTTTCTTCCCAGATTAACAT+AGG + chr1.1:64599494-64599513 None:intergenic 30.0%
! TTTTTCACACACTACAATGA+TGG - chr1.1:64594989-64595008 MS.gene005523:CDS 30.0%
!! ATGGTAATGGAGATCTAATA+AGG - chr1.1:64595443-64595462 MS.gene005523:CDS 30.0%
!!! ATTTTTTTTTCTTTTCGCGC+TGG + chr1.1:64594849-64594868 None:intergenic 30.0%
!!! TATTTTCGGGTACAAAAGTA+CGG + chr1.1:64595680-64595699 None:intergenic 30.0%
AAAAATGCAACTAGAGGAAG+AGG - chr1.1:64596887-64596906 MS.gene005523:CDS 35.0%
AAATGGGTAAAATGTGTGAG+TGG + chr1.1:64597670-64597689 None:intergenic 35.0%
AAATGTTGGATACGTAAGAG+AGG + chr1.1:64598090-64598109 None:intergenic 35.0%
AACAAGTGGTATTATTGCCT+TGG + chr1.1:64597956-64597975 None:intergenic 35.0%
AAGAGTTCCTTTCAAAGCTA+TGG - chr1.1:64599063-64599082 MS.gene005523:CDS 35.0%
AAGGCAATAATACCACTTGT+TGG - chr1.1:64597955-64597974 MS.gene005523:CDS 35.0%
AATGTACTCTAGATTTGCGA+AGG - chr1.1:64594808-64594827 MS.gene005523:CDS 35.0%
ACAAATCAACTACATCCTCA+AGG + chr1.1:64596932-64596951 None:intergenic 35.0%
ACCTTATGGCATTAGGTATA+TGG - chr1.1:64598060-64598079 MS.gene005523:intron 35.0%
ACTATTGACCAATGTGAGAA+TGG - chr1.1:64599658-64599677 MS.gene005523:CDS 35.0%
ACTCATACGTGAAATTGATG+TGG - chr1.1:64595983-64596002 MS.gene005523:intron 35.0%
AGAAAAGGTTCTGTTCATCA+AGG - chr1.1:64599508-64599527 MS.gene005523:intron 35.0%
AGCAAAAGCAAGACTCTTAT+TGG + chr1.1:64596480-64596499 None:intergenic 35.0%
AGCAAGATCATGAAAGATGA+AGG + chr1.1:64594199-64594218 None:intergenic 35.0%
AGCAATCCTAAACCATTAAG+TGG - chr1.1:64599556-64599575 MS.gene005523:intron 35.0%
AGGCAATAATACCACTTGTT+GGG - chr1.1:64597956-64597975 MS.gene005523:CDS 35.0%
AGTCTCATGTCACCTATAAA+TGG + chr1.1:64597687-64597706 None:intergenic 35.0%
AGTTGTTCATAGAGAGCTTA+GGG - chr1.1:64598888-64598907 MS.gene005523:CDS 35.0%
ATCAAACATTCACGTGTGAA+AGG - chr1.1:64597014-64597033 MS.gene005523:CDS 35.0%
ATCTCATACATAGGAATGGA+AGG - chr1.1:64594962-64594981 MS.gene005523:CDS 35.0%
ATGCTCTTTCTTGATAGGTT+TGG + chr1.1:64600022-64600041 None:intergenic 35.0%
ATGTACTCTAACTCATCTAG+TGG - chr1.1:64595028-64595047 MS.gene005523:CDS 35.0%
CAAGGTGAAATAGAAGAAAG+TGG - chr1.1:64599526-64599545 MS.gene005523:intron 35.0%
CAAGTCAAAGAGAATTCTGT+TGG - chr1.1:64597347-64597366 MS.gene005523:CDS 35.0%
CATAAGACATGGATCTTGTT+GGG + chr1.1:64597249-64597268 None:intergenic 35.0%
CCTTATGGCATTAGGTATAT+GGG - chr1.1:64598061-64598080 MS.gene005523:intron 35.0%
CTAGAATCAACAGAATAGGA+GGG - chr1.1:64595251-64595270 MS.gene005523:CDS 35.0%
GACAATGCGAGTGATATAAT+CGG + chr1.1:64595308-64595327 None:intergenic 35.0%
GACTCTCATCGTCTATAAAT+AGG + chr1.1:64597643-64597662 None:intergenic 35.0%
GAGACAGTGAATTATGAGTA+TGG - chr1.1:64598689-64598708 MS.gene005523:CDS 35.0%
GGAGACCAACTTAAAACAAA+TGG - chr1.1:64596619-64596638 MS.gene005523:intron 35.0%
GTAGATTGTTCCAAGTCATT+AGG - chr1.1:64599335-64599354 MS.gene005523:intron 35.0%
GTCTATGTGTCTTGTGTTTA+TGG + chr1.1:64598022-64598041 None:intergenic 35.0%
GTCTCATGTCACCTATAAAT+GGG + chr1.1:64597686-64597705 None:intergenic 35.0%
GTCTTGTGTTTATGGAACAT+TGG + chr1.1:64598014-64598033 None:intergenic 35.0%
GTGTTTGGATTAAGTATAGG+AGG + chr1.1:64597899-64597918 None:intergenic 35.0%
GTGTTTGTATCAAGTATAGG+AGG + chr1.1:64597760-64597779 None:intergenic 35.0%
GTTGTATTGGACTCTTGTAA+TGG - chr1.1:64596984-64597003 MS.gene005523:CDS 35.0%
TACAAGAAATGGGTATACCT+TGG + chr1.1:64594636-64594655 None:intergenic 35.0%
TAGAATCAACAGAATAGGAG+GGG - chr1.1:64595252-64595271 MS.gene005523:CDS 35.0%
TAGACACACACTTTCATCAT+TGG + chr1.1:64599437-64599456 None:intergenic 35.0%
TATCAGTGATCAAAGTTCAC+CGG - chr1.1:64598988-64599007 MS.gene005523:CDS 35.0%
TATGAGATTTGTGTCAAGTG+AGG + chr1.1:64594950-64594969 None:intergenic 35.0%
TCAGCTAGAATCAACAGAAT+AGG - chr1.1:64595247-64595266 MS.gene005523:CDS 35.0%
TCATATTTGGCTACCAAAGA+TGG - chr1.1:64595346-64595365 MS.gene005523:CDS 35.0%
TCCAACCAAACAACTTTACT+AGG + chr1.1:64599238-64599257 None:intergenic 35.0%
TCCTAGTAAAGTTGTTTGGT+TGG - chr1.1:64599234-64599253 MS.gene005523:CDS 35.0%
TGCATCACTCATACAACAAA+AGG - chr1.1:64596424-64596443 MS.gene005523:intron 35.0%
TGCTACCCCATTGATATTAT+GGG - chr1.1:64595544-64595563 MS.gene005523:CDS 35.0%
TGGAGATCTAATAAGGAATG+CGG - chr1.1:64595450-64595469 MS.gene005523:CDS 35.0%
TGTACTCTAACTCATCTAGT+GGG - chr1.1:64595029-64595048 MS.gene005523:CDS 35.0%
TGTGCCCTATTTAACAACAT+TGG + chr1.1:64596693-64596712 None:intergenic 35.0%
TTCATCTTTCATGATCTTGC+TGG - chr1.1:64594198-64594217 MS.gene005523:CDS 35.0%
TTGCTACCCCATTGATATTA+TGG - chr1.1:64595543-64595562 MS.gene005523:CDS 35.0%
TTGGATTAAGTATAGGAGGT+GGG + chr1.1:64597895-64597914 None:intergenic 35.0%
TTGTATCAAGTATAGGAGGT+GGG + chr1.1:64597756-64597775 None:intergenic 35.0%
TTTGGATTAAGTATAGGAGG+TGG + chr1.1:64597896-64597915 None:intergenic 35.0%
TTTGTATCAAGTATAGGAGG+TGG + chr1.1:64597757-64597776 None:intergenic 35.0%
! AAGATGAGAGATCCATTTTG+TGG + chr1.1:64596281-64596300 None:intergenic 35.0%
! ACCTAATGCCATAAGGTTTT+GGG + chr1.1:64598057-64598076 None:intergenic 35.0%
! AGATGAGAGATCCATTTTGT+GGG + chr1.1:64596280-64596299 None:intergenic 35.0%
! AGGAGGATTAGTAAAATCCT+TGG + chr1.1:64599719-64599738 None:intergenic 35.0%
! ATGACACTGGAATGGTTTTT+GGG - chr1.1:64595095-64595114 MS.gene005523:CDS 35.0%
! CACAGGTTGGATATAGTATA+TGG + chr1.1:64595071-64595090 None:intergenic 35.0%
! GAAAGGTGTAGAAGTTGTAT+TGG - chr1.1:64596971-64596990 MS.gene005523:CDS 35.0%
! GAAGAAAATAATGAGTGCTG+AGG + chr1.1:64594267-64594286 None:intergenic 35.0%
! GTATTTGAAGTGGATGATAC+GGG - chr1.1:64597275-64597294 MS.gene005523:CDS 35.0%
! GTTGTGTTATTGTAGGCATA+TGG - chr1.1:64594386-64594405 MS.gene005523:intron 35.0%
! TACCTAATGCCATAAGGTTT+TGG + chr1.1:64598058-64598077 None:intergenic 35.0%
! TATTTGAAGTGGATGATACG+GGG - chr1.1:64597276-64597295 MS.gene005523:CDS 35.0%
! TTTTTATTACCGAACTGTCG+TGG - chr1.1:64594723-64594742 MS.gene005523:CDS 35.0%
!! AAGTGGAAAGAAGTTTTTGG+TGG - chr1.1:64599573-64599592 MS.gene005523:intron 35.0%
!! ACTGACTTGTGATTCTCTTT+AGG + chr1.1:64597311-64597330 None:intergenic 35.0%
!! AGTTGATTTGTACCATCCAA+TGG - chr1.1:64596941-64596960 MS.gene005523:CDS 35.0%
!! TCTTGATAGGTTTGGTAATG+TGG + chr1.1:64600014-64600033 None:intergenic 35.0%
!!! GCGAAGGAAATTCACTTTTT+TGG - chr1.1:64594771-64594790 MS.gene005523:CDS 35.0%
AACAAGGGAGATAAGAGAGA+TGG - chr1.1:64599906-64599925 MS.gene005523:intron 40.0%
AAGTGTGGAACAATGTTGGA+AGG - chr1.1:64599456-64599475 MS.gene005523:intron 40.0%
ACAATTCGTACTGCTAGTTC+TGG - chr1.1:64598755-64598774 MS.gene005523:CDS 40.0%
ACACCTTTCTTCATTGCCAT+TGG + chr1.1:64596960-64596979 None:intergenic 40.0%
ACCCAAAACCTTATGGCATT+AGG - chr1.1:64598053-64598072 MS.gene005523:intron 40.0%
ACTTGACACAAGCAAGATTG+AGG - chr1.1:64596860-64596879 MS.gene005523:CDS 40.0%
AGACATTGGTATTGTGGACA+AGG - chr1.1:64598607-64598626 MS.gene005523:intron 40.0%
AGAGAGATGGAGAAACACTA+TGG - chr1.1:64599919-64599938 MS.gene005523:intron 40.0%
AGTGTGGAACAATGTTGGAA+GGG - chr1.1:64599457-64599476 MS.gene005523:intron 40.0%
ATATTGCTCCTGATGCTTCT+CGG + chr1.1:64597537-64597556 None:intergenic 40.0%
ATCCAATTACCACCAAACTC+AGG + chr1.1:64599367-64599386 None:intergenic 40.0%
ATTAGGCTTCTTCCTGAGTT+TGG - chr1.1:64599352-64599371 MS.gene005523:intron 40.0%
ATTATTGCCTTGGTTCAGCT+TGG + chr1.1:64597946-64597965 None:intergenic 40.0%
ATTCACGTGTGAAAGGTGAT+AGG - chr1.1:64597021-64597040 MS.gene005523:CDS 40.0%
CAAAAACCATTCCAGTGTCA+TGG + chr1.1:64595096-64595115 None:intergenic 40.0%
CAAGATAAGCACGAAGATCA+TGG + chr1.1:64596511-64596530 None:intergenic 40.0%
CAATATCAGGTGAATGCACT+AGG - chr1.1:64597551-64597570 MS.gene005523:intron 40.0%
CACACACTTTCATCATTGGA+AGG + chr1.1:64599433-64599452 None:intergenic 40.0%
CACTGTCTCATTCTCACATA+AGG + chr1.1:64598678-64598697 None:intergenic 40.0%
CAGTTGTTCATAGAGAGCTT+AGG - chr1.1:64598887-64598906 MS.gene005523:CDS 40.0%
CATCCAATGGCAATGAAGAA+AGG - chr1.1:64596954-64596973 MS.gene005523:CDS 40.0%
CCAACAAGATCCATGTCTTA+TGG - chr1.1:64597247-64597266 MS.gene005523:CDS 40.0%
CCATAAGACATGGATCTTGT+TGG + chr1.1:64597250-64597269 None:intergenic 40.0%
CCCATATACCTAATGCCATA+AGG + chr1.1:64598064-64598083 None:intergenic 40.0%
CCTTTCAAAGCTATGGATCA+TGG - chr1.1:64599070-64599089 MS.gene005523:CDS 40.0%
CTTTCTTCATTGCCATTGGA+TGG + chr1.1:64596956-64596975 None:intergenic 40.0%
GAGCTTAGGGATTAAAGTCA+AGG - chr1.1:64598901-64598920 MS.gene005523:CDS 40.0%
GCTAGAATCAACAGAATAGG+AGG - chr1.1:64595250-64595269 MS.gene005523:CDS 40.0%
GGAGATCTAATAAGGAATGC+GGG - chr1.1:64595451-64595470 MS.gene005523:CDS 40.0%
GTACTCTAACTCATCTAGTG+GGG - chr1.1:64595030-64595049 MS.gene005523:CDS 40.0%
GTCTAAGTGTGGAACAATGT+TGG - chr1.1:64599452-64599471 MS.gene005523:intron 40.0%
TACTCTAACTCATCTAGTGG+GGG - chr1.1:64595031-64595050 MS.gene005523:CDS 40.0%
TATGAGTATGGATCAACCTC+AGG - chr1.1:64598701-64598720 MS.gene005523:CDS 40.0%
TGATTTATCCTCTCTCCTTG+AGG - chr1.1:64596914-64596933 MS.gene005523:CDS 40.0%
TGTGAAATCTCCCTCTCTTA+TGG + chr1.1:64597578-64597597 None:intergenic 40.0%
TGTTCAAGAGGGTTTAACCA+AGG - chr1.1:64599699-64599718 MS.gene005523:CDS 40.0%
TGTTGGGTTATAAGTGTGAG+TGG + chr1.1:64597713-64597732 None:intergenic 40.0%
TTCTAGGTACGTTTGATGCA+TGG - chr1.1:64598584-64598603 MS.gene005523:intron 40.0%
TTGGTCTCCAATTCTGAACT+TGG + chr1.1:64596608-64596627 None:intergenic 40.0%
TTGTTAACGAGCGGCTATAA+TGG - chr1.1:64596785-64596804 MS.gene005523:intron 40.0%
! AATTGTGCCCAAGATTTGCT+AGG - chr1.1:64596644-64596663 MS.gene005523:intron 40.0%
! ATACCAACATGGTGTCAATG+AGG + chr1.1:64594429-64594448 None:intergenic 40.0%
! CATGACACTGGAATGGTTTT+TGG - chr1.1:64595094-64595113 MS.gene005523:CDS 40.0%
! GGCAATAATACCACTTGTTG+GGG - chr1.1:64597957-64597976 MS.gene005523:CDS 40.0%
! TGAAAGTGTGTGTCTAAGTG+TGG - chr1.1:64599441-64599460 MS.gene005523:intron 40.0%
! TGACACTGGAATGGTTTTTG+GGG - chr1.1:64595096-64595115 MS.gene005523:CDS 40.0%
! TTCCTGAGTTTGGTGGTAAT+TGG - chr1.1:64599362-64599381 MS.gene005523:intron 40.0%
!! ATGGCTACTTTGAGATCTCT+TGG - chr1.1:64599628-64599647 MS.gene005523:CDS 40.0%
!! CCATGATCCATAGCTTTGAA+AGG + chr1.1:64599073-64599092 None:intergenic 40.0%
!!! TAATGCCATAAGGTTTTGGG+TGG + chr1.1:64598054-64598073 None:intergenic 40.0%
AACAAGTGGTTGCAATGTCC+TGG + chr1.1:64597820-64597839 None:intergenic 45.0%
AACACTCTTGCGGTTAGACT+TGG + chr1.1:64597156-64597175 None:intergenic 45.0%
AACTACATCCTCAAGGAGAG+AGG + chr1.1:64596925-64596944 None:intergenic 45.0%
AATTGGACAGATGCCAGTGA+AGG - chr1.1:64599870-64599889 MS.gene005523:intron 45.0%
ACTTGGGATTGTGCAGTCAT+TGG - chr1.1:64597391-64597410 MS.gene005523:intron 45.0%
AGAATGACATGTGAAGGCTC+AGG + chr1.1:64598833-64598852 None:intergenic 45.0%
AGGACATTGCAACCACTTGT+TGG - chr1.1:64597819-64597838 MS.gene005523:CDS 45.0%
AGGGGAGAATCTTGGGTTTA+TGG + chr1.1:64597861-64597880 None:intergenic 45.0%
AGTCTTCGGAGATGAGTTCT+AGG - chr1.1:64599011-64599030 MS.gene005523:CDS 45.0%
AGTTAGAGCATGGACTCAGA+AGG - chr1.1:64597115-64597134 MS.gene005523:CDS 45.0%
ATGCACTAGGACCATAAGAG+AGG - chr1.1:64597564-64597583 MS.gene005523:intron 45.0%
ATTCCAGTGTCATGGTTCAC+AGG + chr1.1:64595088-64595107 None:intergenic 45.0%
CAGGAAGAAGCCTAATGACT+TGG + chr1.1:64599348-64599367 None:intergenic 45.0%
CATCTCCACCCAAAACCTTA+TGG - chr1.1:64598046-64598065 MS.gene005523:intron 45.0%
CCAATGTGAGAATGGTGAAG+AGG - chr1.1:64599666-64599685 MS.gene005523:CDS 45.0%
CCTCTTCACCATTCTCACAT+TGG + chr1.1:64599669-64599688 None:intergenic 45.0%
CGTTTGATGCATGGAGACAT+TGG - chr1.1:64598593-64598612 MS.gene005523:intron 45.0%
CTTCTCTGATGTTCACACCA+AGG - chr1.1:64594616-64594635 MS.gene005523:CDS 45.0%
GAAATCCATTCCAGTCTCAG+TGG + chr1.1:64599992-64600011 None:intergenic 45.0%
GACAAGGAAGTTGGCAAAAG+AGG - chr1.1:64598623-64598642 MS.gene005523:intron 45.0%
GACACCATGTTGGTATCTCA+TGG - chr1.1:64594433-64594452 MS.gene005523:intron 45.0%
GAGAATTCTGTTGGCCAAGT+AGG - chr1.1:64597356-64597375 MS.gene005523:CDS 45.0%
GATCTTCGTGCTTATCTTGC+AGG - chr1.1:64596512-64596531 MS.gene005523:intron 45.0%
GATTGTGTTGGGCTTCTAGT+AGG + chr1.1:64598147-64598166 None:intergenic 45.0%
GCATGGAGACATTGGTATTG+TGG - chr1.1:64598601-64598620 MS.gene005523:intron 45.0%
GCTGTGAGAACTGTTCAAGA+GGG - chr1.1:64599688-64599707 MS.gene005523:CDS 45.0%
GGAAGTGGGATTCTAGTGTT+TGG + chr1.1:64597914-64597933 None:intergenic 45.0%
GGACATTGCAACCACTTGTT+GGG - chr1.1:64597820-64597839 MS.gene005523:CDS 45.0%
GGCACATAACAGTTAGAGCA+TGG - chr1.1:64597105-64597124 MS.gene005523:CDS 45.0%
GGCAGGAAAAATGCAACTAG+AGG - chr1.1:64596881-64596900 MS.gene005523:CDS 45.0%
GGCATCTGTCCAATTCATTG+TGG + chr1.1:64599865-64599884 None:intergenic 45.0%
GGGAGAATCTTGGGTTTATG+GGG + chr1.1:64597859-64597878 None:intergenic 45.0%
GGGGAGAATCTTGGGTTTAT+GGG + chr1.1:64597860-64597879 None:intergenic 45.0%
GGTATTGTGGACAAGGAAGT+TGG - chr1.1:64598614-64598633 MS.gene005523:intron 45.0%
GTCTCACATCGCCTATGAAT+AGG + chr1.1:64598115-64598134 None:intergenic 45.0%
GTGACCATGAGATACCAACA+TGG + chr1.1:64594440-64594459 None:intergenic 45.0%
GTGTTAGCTGTCCCACAAAA+TGG - chr1.1:64596266-64596285 MS.gene005523:intron 45.0%
TAAGTAGTTCGAGATCGCGA+AGG - chr1.1:64594755-64594774 MS.gene005523:CDS 45.0%
TCAAAGTTCACCGGAGTCTT+CGG - chr1.1:64598997-64599016 MS.gene005523:CDS 45.0%
TCTTGCAAGGATCAAGCTGT+TGG - chr1.1:64595481-64595500 MS.gene005523:CDS 45.0%
TGCACTAGGACCATAAGAGA+GGG - chr1.1:64597565-64597584 MS.gene005523:intron 45.0%
TGTGAACCATGACACTGGAA+TGG - chr1.1:64595087-64595106 MS.gene005523:CDS 45.0%
TTGCCTCATTGACACCATGT+TGG - chr1.1:64594423-64594442 MS.gene005523:intron 45.0%
! AACATGGTGTCAATGAGGCA+AGG + chr1.1:64594424-64594443 None:intergenic 45.0%
! CTTGGTGTGAACATCAGAGA+AGG + chr1.1:64594618-64594637 None:intergenic 45.0%
! CTTTCTCTCAGCTTGTTCTG+TGG + chr1.1:64596453-64596472 None:intergenic 45.0%
! GAAGCATCAGGAGCAATATC+AGG - chr1.1:64597538-64597557 MS.gene005523:intron 45.0%
! GCTTATCTTGCAGGCCTTAT+TGG - chr1.1:64596521-64596540 MS.gene005523:intron 45.0%
!!! GGTTTGGTTTTTGTCACCTG+AGG + chr1.1:64598720-64598739 None:intergenic 45.0%
!!! TAAGGTTTTGGGTGGAGATG+TGG + chr1.1:64598046-64598065 None:intergenic 45.0%
ACTCGCATTGTCGATCGTCA+AGG - chr1.1:64595316-64595335 MS.gene005523:CDS 50.0%
AGAATAGGAGGGGTCTCTCT+TGG - chr1.1:64595262-64595281 MS.gene005523:CDS 50.0%
AGGCTTCTTCCTGAGTTTGG+TGG - chr1.1:64599355-64599374 MS.gene005523:intron 50.0%
ATTGCCTTGGTTCAGCTTGG+TGG + chr1.1:64597943-64597962 None:intergenic 50.0%
CAACCTGTGAACCATGACAC+TGG - chr1.1:64595082-64595101 MS.gene005523:CDS 50.0%
CAGTGTCATGGTTCACAGGT+TGG + chr1.1:64595084-64595103 None:intergenic 50.0%
CCAACAGATTGCCCAACAAG+TGG + chr1.1:64597834-64597853 None:intergenic 50.0%
CCACTTTGACCACGACAGTT+CGG + chr1.1:64594735-64594754 None:intergenic 50.0%
CGCTTGAAGGGGAGAATCTT+GGG + chr1.1:64597868-64597887 None:intergenic 50.0%
CGCTTGAGGGAGAGATTGTT+GGG + chr1.1:64597729-64597748 None:intergenic 50.0%
CTCGCATTGTCGATCGTCAA+GGG - chr1.1:64595317-64595336 MS.gene005523:CDS 50.0%
CTTGGTGGAAGAGTGGAAGT+GGG + chr1.1:64597928-64597947 None:intergenic 50.0%
GAACTCATCTCCGAAGACTC+CGG + chr1.1:64599010-64599029 None:intergenic 50.0%
GAAGTGGATGATACGGGGAA+AGG - chr1.1:64597281-64597300 MS.gene005523:CDS 50.0%
GACACAAGCAAGATTGAGGC+AGG - chr1.1:64596864-64596883 MS.gene005523:CDS 50.0%
GACAGATGCCAGTGAAGGAT+GGG - chr1.1:64599875-64599894 MS.gene005523:intron 50.0%
GGCTGTGAGAACTGTTCAAG+AGG - chr1.1:64599687-64599706 MS.gene005523:CDS 50.0%
TCGCTTGAAGGGGAGAATCT+TGG + chr1.1:64597869-64597888 None:intergenic 50.0%
TCGCTTGAGGGAGAGATTGT+TGG + chr1.1:64597730-64597749 None:intergenic 50.0%
TCTGTTGGCCAAGTAGGAAC+TGG - chr1.1:64597362-64597381 MS.gene005523:CDS 50.0%
TCTTCCACCAAGCTGAACCA+AGG - chr1.1:64597936-64597955 MS.gene005523:CDS 50.0%
TGGGGAGTCTGAGGAAACAT+CGG - chr1.1:64597975-64597994 MS.gene005523:intron 50.0%
! AGGATGGGTTTGAGGCAACA+AGG - chr1.1:64599890-64599909 MS.gene005523:intron 50.0%
! CCACTTGTTGGGCAATCTGT+TGG - chr1.1:64597831-64597850 MS.gene005523:CDS 50.0%
! GAGGGGCTAACATGGAGTTT+TGG + chr1.1:64598803-64598822 None:intergenic 50.0%
! GGATGGGTTTGAGGCAACAA+GGG - chr1.1:64599891-64599910 MS.gene005523:intron 50.0%
!! GTTAGAGTCCGAGAAGCATC+AGG - chr1.1:64597526-64597545 MS.gene005523:intron 50.0%
!! TAGGAACTGGCTTGGGACTT+GGG - chr1.1:64597375-64597394 MS.gene005523:CDS 50.0%
AGGTGGGAACTCGCTTGAAG+GGG + chr1.1:64597879-64597898 None:intergenic 55.0%
CCGAACTGTCGTGGTCAAAG+TGG - chr1.1:64594732-64594751 MS.gene005523:CDS 55.0%
CTCGGTGGAAGAGTGGAAGT+GGG + chr1.1:64597792-64597811 None:intergenic 55.0%
GACAAGCTGACCACTGAGAC+TGG - chr1.1:64599979-64599998 MS.gene005523:intron 55.0%
GAGGTGGGAACTCGCTTGAA+GGG + chr1.1:64597880-64597899 None:intergenic 55.0%
GCCTCAAACCCATCCTTCAC+TGG + chr1.1:64599886-64599905 None:intergenic 55.0%
GCTGACCACTGAGACTGGAA+TGG - chr1.1:64599984-64600003 MS.gene005523:intron 55.0%
GGACAGATGCCAGTGAAGGA+TGG - chr1.1:64599874-64599893 MS.gene005523:intron 55.0%
GGAGTCTGAGGAAACATCGG+GGG - chr1.1:64597978-64597997 MS.gene005523:intron 55.0%
GGGAGTCTGAGGAAACATCG+GGG - chr1.1:64597977-64597996 MS.gene005523:intron 55.0%
GGGGAGTCTGAGGAAACATC+GGG - chr1.1:64597976-64597995 MS.gene005523:intron 55.0%
GTCCCAAGCCAGTTCCTACT+TGG + chr1.1:64597373-64597392 None:intergenic 55.0%
GTGGTTGCAATGTCCTGGTC+CGG + chr1.1:64597815-64597834 None:intergenic 55.0%
TCCATGTTAGCCCCTCTCAG+AGG - chr1.1:64598807-64598826 MS.gene005523:CDS 55.0%
TCCTCAGACTCCCCAACAAG+TGG + chr1.1:64597970-64597989 None:intergenic 55.0%
TGCGGGAGCTGTATCTTGCA+AGG - chr1.1:64595468-64595487 MS.gene005523:CDS 55.0%
TGGCCAAGTAGGAACTGGCT+TGG - chr1.1:64597367-64597386 MS.gene005523:CDS 55.0%
! ACCACTTGTTGGGGAGTCTG+AGG - chr1.1:64597966-64597985 MS.gene005523:CDS 55.0%
! GCCAGTGAAGGATGGGTTTG+AGG - chr1.1:64599882-64599901 MS.gene005523:intron 55.0%
! GCTTGGTGGAAGAGTGGAAG+TGG + chr1.1:64597929-64597948 None:intergenic 55.0%
! GGCCAAGTAGGAACTGGCTT+GGG - chr1.1:64597368-64597387 MS.gene005523:CDS 55.0%
! GGTTCAGCTTGGTGGAAGAG+TGG + chr1.1:64597935-64597954 None:intergenic 55.0%
!! GTAGGAACTGGCTTGGGACT+TGG - chr1.1:64597374-64597393 MS.gene005523:CDS 55.0%
AGGAGGTGGGAACTCGCTTG+AGG + chr1.1:64597743-64597762 None:intergenic 60.0%
CTTCCACTCTTCCACCGAGC+CGG - chr1.1:64597793-64597812 MS.gene005523:CDS 60.0%
GGAGGTGGGAACTCGCTTGA+AGG + chr1.1:64597742-64597761 None:intergenic 60.0%
GGAGGTGGGAACTCGCTTGA+GGG + chr1.1:64597742-64597761 None:intergenic 60.0%
TGAAGGCTCAGGCCTCTGAG+AGG + chr1.1:64598822-64598841 None:intergenic 60.0%
TGCAATGTCCTGGTCCGGCT+CGG + chr1.1:64597810-64597829 None:intergenic 60.0%
! AAGGCTCAGGCCTCTGAGAG+GGG + chr1.1:64598820-64598839 None:intergenic 60.0%
! GAAGGCTCAGGCCTCTGAGA+GGG + chr1.1:64598821-64598840 None:intergenic 60.0%
! GCCTCTGAGAGGGGCTAACA+TGG + chr1.1:64598811-64598830 None:intergenic 60.0%
! GCTCGGTGGAAGAGTGGAAG+TGG + chr1.1:64597793-64597812 None:intergenic 60.0%
!! AATGTCCTGGTCCGGCTCGG+TGG + chr1.1:64597807-64597826 None:intergenic 65.0%
CTCTTCCACCGAGCCGGACC+AGG - chr1.1:64597799-64597818 MS.gene005523:CDS 70.0%
!! GGTCCGGCTCGGTGGAAGAG+TGG + chr1.1:64597799-64597818 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr1.1 gene 64594163 64600086 64594163 ID=MS.gene005523
chr1.1 mRNA 64594163 64600086 64594163 ID=MS.gene005523.t1;Parent=MS.gene005523
chr1.1 exon 64600030 64600086 64600030 ID=MS.gene005523.t1.exon1;Parent=MS.gene005523.t1
chr1.1 CDS 64600030 64600086 64600030 ID=cds.MS.gene005523.t1;Parent=MS.gene005523.t1
chr1.1 exon 64599612 64599848 64599612 ID=MS.gene005523.t1.exon2;Parent=MS.gene005523.t1
chr1.1 CDS 64599612 64599848 64599612 ID=cds.MS.gene005523.t1;Parent=MS.gene005523.t1
chr1.1 exon 64598673 64599338 64598673 ID=MS.gene005523.t1.exon3;Parent=MS.gene005523.t1
chr1.1 CDS 64598673 64599338 64598673 ID=cds.MS.gene005523.t1;Parent=MS.gene005523.t1
chr1.1 exon 64597584 64597989 64597584 ID=MS.gene005523.t1.exon4;Parent=MS.gene005523.t1
chr1.1 CDS 64597584 64597989 64597584 ID=cds.MS.gene005523.t1;Parent=MS.gene005523.t1
chr1.1 exon 64596837 64597405 64596837 ID=MS.gene005523.t1.exon5;Parent=MS.gene005523.t1
chr1.1 CDS 64596837 64597405 64596837 ID=cds.MS.gene005523.t1;Parent=MS.gene005523.t1
chr1.1 exon 64594484 64595659 64594484 ID=MS.gene005523.t1.exon6;Parent=MS.gene005523.t1
chr1.1 CDS 64594484 64595659 64594484 ID=cds.MS.gene005523.t1;Parent=MS.gene005523.t1
chr1.1 exon 64594163 64594369 64594163 ID=MS.gene005523.t1.exon7;Parent=MS.gene005523.t1
chr1.1 CDS 64594163 64594369 64594163 ID=cds.MS.gene005523.t1;Parent=MS.gene005523.t1
Gene Sequence

>MS.gene005523

ATGAATACTGGTTTATCAATGGCATTACTTCGACCTTCATCTTTCATGATCTTGCTGGTACGTCTTTATATTTATGCGTTCATGCTATTTTTCTTCATGTTCCTCAGCACTCATTATTTTCTTCGATTTGATTTGTAAAAGAGATTAAGAAACAATTGAGATTTGTTGTTTATGTCTTCAACTAGAAGTATACATAGCTACACATAAATTTACGATATTATTTGTTGTGTTATTGTAGGCATATGGTGCACTAATTGTCCTTGCCTCATTGACACCATGTTGGTATCTCATGGTCACACATATTGAGAAAAGTGTGAATTTGCACTCAGCAAATATTGTGTCACAATTGCAATCAGAAATTGAGTACTCAGCTGAACTATTGCAACCAATGAAATCATCATCAACAAATTTATCTACATTATTGAGCTCAACCCTTAATTCTACTAATGTCACCTTCTCTGATGTTCACACCAAGGTATACCCATTTCTTGTATAATTTCCCTTCAAAACCATAAATATTTTGTTTGCTTATTTTTTATTATTTTTTATATCAAAATTATTTTTTATTACCGAACTGTCGTGGTCAAAGTGGTAAGTAGTTCGAGATCGCGAAGGAAATTCACTTTTTTGGAGCGAAAACTCTTAAATGTACTCTAGATTTGCGAAGGAATTAAGTTTTCGCGCCAGCGCGAAAAGAAAAAAAAATATCTTTGTATCTTTAATGGTTTAATTTATTTGCACTTTGTAGGTGGCTCCGTTATTATTTCAAGCATTGAAGACAATTCCTCACTTGACACAAATCTCATACATAGGAATGGAAGGTCTTTTTTTCACACACTACAATGATGGTGATCAAGTTCTAGCAATGTACTCTAACTCATCTAGTGGGGGTGCTTCAAACAAAACCATATACTATATCCAACCTGTGAACCATGACACTGGAATGGTTTTTGGGGAAGCCATAATATCTAACAACACTATCAATATTGATGCAAGTTGGATAAATGGAACAAATAATATTTCACATGAATTTGCATCATTGGGAACAAAGTTGAATAATGTTAGTGATCTTTTGTTCATGAATTCAGCTAGAATCAACAGAATAGGAGGGGTCTCTCTTGGATTTTCGACGAAAGCAATAACCGATTATATCACTCGCATTGTCGATCGTCAAGGGACAAAATCATATTTGGCTACCAAAGATGGAAAAGTTATTGTAAAAGGAATTCAAAATATCCGTTTGATGATTTTTAATGATAGTGTTTCAATTCAAGCTGTTAATGGTAATGGAGATCTAATAAGGAATGCGGGAGCTGTATCTTGCAAGGATCAAGCTGTTGGTTCTAGTTTGAATATTCATGATACTCAATATTTGATTCATTGCTACCCCATTGATATTATGGGAATAGAATCGGTACGTTTTTATATTTTTTGCATATTAGTTTGTTTGATTACGATGCAATTTTTTTCAATTGATTCCAATAGTAGTATATTAACTAACTAAGAAAACAAGACCGTACTTTTGTACCCGAAAATACCAAATAGTACTTTGTACCCAAAAAATAATTTTACTACTTTCACAATACAATTTGCATATTAGTTCACACTTTAATATTTTTATACTATTTTCACAAAACATCTCTCTTGGTCTTGTATCTTATAATTGTTTTCTAATTTTATTTTTTTTGCTACATTTTTCTCACTCTATTTCATTATTTATTTAAATAATCACCGTTTATAAACACATTCCATAAAAAAAAAATCAAATACACATTGTTTACAACATTTATTTTAGATAAGTTTTAGCAACATTATTTCTAACTCATACGTGAAATTGATGTGGTCCCATAATTTGAAAATTTAACACACATTAATTGACATGAATTTCACTCAATAAGAAAGTGAACATTGTGTTTTTTTGTCGAACATAACCTTAATAGTTTTAACTCAAAGAAGAAGAAAAAAAATAATCAAGTAATAATGACTTCAATTAACATGTGTTTAATTATCCAAATATGTTCACAAATGTCATGTATGTTTCAATTAACATGTAACTGAATATTTTTCTTATCTCTAACTAATTTTATTAAATGTCAGGTGCATGTGTTAGCTGTCCCACAAAATGGATCTCTCATCTTTAATCCAAGTCATAAAGAAAAGGGATTGACACTCTTGATTGTAATGATCGTGATGATATTTATTGCTATCTTGAGTTTTCTATTCTTGAATGTTGGTGTGACAAAGAGAGAAATGCAATTGTGTGCATCACTCATACAACAAAAGGAAGCCACAGAACAAGCTGAGAGAAAGAATACCAATAAGAGTCTTGCTTTTGCTACTGCTAGCCATGATCTTCGTGCTTATCTTGCAGGCCTTATTGGTTTGATTGAAATGTCCTCTAAATTAGTTGTTACTAATTCAAAATTGGACACCAATTTGAAACCAAGTTCAGAATTGGAGACCAACTTAAAACAAATGGATAATTGTGCCCAAGATTTGCTAGGTAAATCATCATAGGTTCATGCTACCAATGTTGTTAAATAGGGCACATTATAGTGTTACAACATAATTGAATTTAAACAAATTGTTGTTGTTCCGTGATATACTATTTAGTACAAAATATTGTTAACGAGCGGCTATAATGGCATCATTAACTCATTTTTATTTTGTTACAATCTTAGGACTGTTGAATTCTATACTTGACACAAGCAAGATTGAGGCAGGAAAAATGCAACTAGAGGAAGAGGAATTTGATTTATCCTCTCTCCTTGAGGATGTAGTTGATTTGTACCATCCAATGGCAATGAAGAAAGGTGTAGAAGTTGTATTGGACTCTTGTAATGGCTCAGTGATCAAACATTCACGTGTGAAAGGTGATAGGAGAAAATTGAAGCAAGTTTTGTGTAACTTGCTAAGCAATGCTGTTAAATTTACTGATGAAGGGCACATAACAGTTAGAGCATGGACTCAGAAGGCCAAATTGCAAAAATCCAAGTCTAACCGCAAGAGTGTTATGAAACATTTGTCTTGGTTGTTTAGTAAGAAAGACAAAGAATGTGAAGACATAGAAGCTGTGAATTTAGCCCAACAAGATCCATGTCTTATGGATTTTGTATTTGAAGTGGATGATACGGGGAAAGGAATTCCTAAAGAGAATCACAAGTCAGTGTTTGAGAATTATGTTCAAGTCAAAGAGAATTCTGTTGGCCAAGTAGGAACTGGCTTGGGACTTGGGATTGTGCAGTCATTGGTAAGCATGTTTTTTTTTATCTATTATTCTCAAATAATTGTGAGAAAATTTTGAGTTTATCGTTCACTTAGTTGTCAATTCATTTAGAGGACATACTTAATTGAATACAATCTGTTAGAGTCCGAGAAGCATCAGGAGCAATATCAGGTGAATGCACTAGGACCATAAGAGAGGGAGATTTCACATCTCGATATATGTGTCACCTCTCTTATAGATCAAACATTTTACCTATTTATAGACGATGAGAGTCTTAACCACTCACACATTTTACCCATTTATAGGTGACATGAGACTTAACCACTCACACTTATAACCCAACAATCTCTCCCTCAAGCGAGTTCCCACCTCCTATACTTGATACAAACACTAGAAAAATCCCACTTCCACTCTTCCACCGAGCCGGACCAGGACATTGCAACCACTTGTTGGGCAATCTGTTGGAACCCCATAAACCCAAGATTCTCCCCTTCAAGCGAGTTCCCACCTCCTATACTTAATCCAAACACTAGAATCCCACTTCCACTCTTCCACCAAGCTGAACCAAGGCAATAATACCACTTGTTGGGGAGTCTGAGGAAACATCGGGGGCAACAACAGACCAATGTTCCATAAACACAAGACACATAGACACCACATCTCCACCCAAAACCTTATGGCATTAGGTATATGGGTCACCTCTCTTACGTATCCAACATTTTACCTATTCATAGGCGATGTGAGACTTAATCACTCCTACTAGAAGCCCAACACAATCAATATGATTCTCTAATATGTATCTGTTTGAATATTGAATCTCAATTCATTATGATGAACCTTGATTCATTCTAATGAAACATTACTAAACTTAATGTAGTTAACAACTTTTTGGTCAATTTTGTATAACCAATCACTTCTCTTTTGTCTTTTAATATATGACTTGAATCTTGAATTATTTTGAAGTTCATATATGATATACAAAGGTTAGCTTATAATTTTGTTATGTCACTTGTTTTTTACTTAAAAATAAATTTTTATTGACAATGTAGCTTACGTTTCATAATAAGATTCGATTCACAATTCGAAAACAACATCTTCCAATTCATGATTTGAATCTTAATAATCTGCATACATTAGTCCTCCCTTTTAGTTGTAAAAAAAATCATATAGTAAAGTAAAATTGTTAAATGGTTTTTTCTAGGTACGTTTGATGCATGGAGACATTGGTATTGTGGACAAGGAAGTTGGCAAAAGAGGAACATGCTTCAAGTTCAATGTGCTTCTCACCTTATGTGAGAATGAGACAGTGAATTATGAGTATGGATCAACCTCAGGTGACAAAAACCAAACCCTAGAGAAAAAATTAACAATTCGTACTGCTAGTTCTGGTTCAAGCATTTGTTCTTTGAGTCCAAAACTCCATGTTAGCCCCTCTCAGAGGCCTGAGCCTTCACATGTCATTCTTTACATTACTGATGAGGAAAGAAGAAGAACTTCGCAGTTGTTCATAGAGAGCTTAGGGATTAAAGTCAAGGTTGTGAAGAGTAGAAATCATCTCATTCATACTCTCAAGAAGATCAAAAAAGAAAAGGGTGACGATATCAGTGATCAAAGTTCACCGGAGTCTTCGGAGATGAGTTCTAGGTGTACATCTTATAACTCTTCTTGTAGTAGAAGAGTTCCTTTCAAAGCTATGGATCATGGAAATGAATATCTATCTTCAATGTTCAAGAAGAAAAACAATGGAGCTGCACCAAGTTTTGTTTTGATTATCATTGATGCAAATGCAGGACCATTTTCTAAGCTTTGTAAGATTGTGTCAAACTTCAAGAAAGATCTTCTCAATCCTAGTAAAGTTGTTTGGTTGGAAAAGCCTTTTGAGAGTAGTGTTGATTACCAAACAATTGATCAAGATGATATTGTGATATCAAAACCATTTCATGGTAGTAGATTGTTCCAAGTCATTAGGCTTCTTCCTGAGTTTGGTGGTAATTGGATAAGCAATTCTAGTAAACCAAGAAATGAATTAAGATCACAAGTACCTTCCAATGATGAAAGTGTGTGTCTAAGTGTGGAACAATGTTGGAAGGGAACACAAAAATCCTATGTTAATCTGGGAAGAAAAGGTTCTGTTCATCAAGGTGAAATAGAAGAAAGTGGAGAATCAAGCAATCCTAAACCATTAAGTGGAAAGAAGTTTTTGGTGGTTGATGATAGTCCTATGCTGAGAAAGATTTGTATGGCTACTTTGAGATCTCTTGGTGTGACTACTATTGACCAATGTGAGAATGGTGAAGAGGCTGTGAGAACTGTTCAAGAGGGTTTAACCAAGGATTTTACTAATCCTCCTTATGATTATATCTTAATGGATTGTCAGGTAAGTAATGATTATTTGAGAGCATTTTTTTTCATGCTTGCAAGTCTTTTGCAATATAACTTAAGCTTTATATTTTGGTCAATGTGCTTAACTTTTCCACAATGAATTGGACAGATGCCAGTGAAGGATGGGTTTGAGGCAACAAGGGAGATAAGAGAGATGGAGAAACACTATGGTCTTCACATTTCTATCATTGCATTATCTGCTGAAATTGACAAGCTGACCACTGAGACTGGAATGGATTTCCACATTACCAAACCTATCAAGAAAGAGCATTTACTCAAAGCTATTGCGTACATAGAAAATAGTGACATAATGTAA
Protein sequence

>MS.gene005523.t1

MNTGLSMALLRPSSFMILLAYGALIVLASLTPCWYLMVTHIEKSVNLHSANIVSQLQSEIEYSAELLQPMKSSSTNLSTLLSSTLNSTNVTFSDVHTKVAPLLFQALKTIPHLTQISYIGMEGLFFTHYNDGDQVLAMYSNSSSGGASNKTIYYIQPVNHDTGMVFGEAIISNNTINIDASWINGTNNISHEFASLGTKLNNVSDLLFMNSARINRIGGVSLGFSTKAITDYITRIVDRQGTKSYLATKDGKVIVKGIQNIRLMIFNDSVSIQAVNGNGDLIRNAGAVSCKDQAVGSSLNIHDTQYLIHCYPIDIMGIESVHVLAVPQNGSLIFNPSHKEKGLTLLIVMIVMIFIAILSFLFLNVGVTKREMQLCASLIQQKEATEQAERKNTNKSLAFATASHDLRAYLAGLIGLIEMSSKLVVTNSKLDTNLKPSSELETNLKQMDNCAQDLLGLLNSILDTSKIEAGKMQLEEEEFDLSSLLEDVVDLYHPMAMKKGVEVVLDSCNGSVIKHSRVKGDRRKLKQVLCNLLSNAVKFTDEGHITVRAWTQKAKLQKSKSNRKSVMKHLSWLFSKKDKECEDIEAVNLAQQDPCLMDFVFEVDDTGKGIPKENHKSVFENYVQVKENSVGQVGTGLGLGIVQSLVRLMHGDIGIVDKEVGKRGTCFKFNVLLTLCENETVNYEYGSTSGDKNQTLEKKLTIRTASSGSSICSLSPKLHVSPSQRPEPSHVILYITDEERRRTSQLFIESLGIKVKVVKSRNHLIHTLKKIKKEKGDDISDQSSPESSEMSSRCTSYNSSCSRRVPFKAMDHGNEYLSSMFKKKNNGAAPSFVLIIIDANAGPFSKLCKIVSNFKKDLLNPSKVVWLEKPFESSVDYQTIDQDDIVISKPFHGSRLFQVIRLLPEFGGNWISNSSKPRNELRSQVPSNDESVCLSVEQCWKGTQKSYVNLGRKGSVHQGEIEESGESSNPKPLSGKKFLVVDDSPMLRKICMATLRSLGVTTIDQCENGEEAVRTVQEGLTKDFTNPPYDYILMDCQMPVKDGFEATREIREMEKHYGLHISIIALSAEIDKLTTETGMDFHITKPIKKEHLLKAIAYIENSDIM