AlfalfaGEDB | MS.gene005668

M. sativa cultivar XinJiangDaYe / MS.gene005668

KEGG: -
GO: GO:0003674 GO:0003676 GO:0005488 GO:0008270 GO:0010011 GO:0042562 GO:0043167 GO:0043169 GO:0046872 GO:0046914 GO:0097159 GO:1901363
PFAM: PF02041.19 PF03101.18

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene005668.t1	PNX73002.1	42.6	843	181	8	227	855	1	754	2.60E-160	576.2

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene005668.t1	P33490	75.2	137	33	1	23	159	17	152	2.0e-57	225.7

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene005668.t1	A0A2K3L384	42.6	843	181	8	227	855	1	754	1.9e-160	576.2

TFs/TRs:

Gene ID	Type	Classification
MS.gene005668.t1	TF	FAR1

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene005668.t1	MTR_1g089810	93.750	160	9	1	1	159	1	160	1.19e-88	280
MS.gene005668.t1	MTR_3g080590	89.899	99	10	0	175	273	57	155	3.16e-55	188
MS.gene005668.t1	MTR_7g446520	46.114	193	89	2	216	408	81	258	4.76e-44	163
MS.gene005668.t1	MTR_0645s0010	67.593	108	29	3	406	513	24	125	2.21e-35	130
MS.gene005668.t1	MTR_7g446480	52.679	112	53	0	297	408	140	251	3.38e-31	125
MS.gene005668.t1	MTR_7g028855	45.455	154	75	2	216	363	113	263	1.52e-29	123
MS.gene005668.t1	MTR_7g446510	51.786	112	54	0	297	408	155	266	9.73e-29	118
MS.gene005668.t1	MTR_1g070355	31.818	176	117	2	223	395	74	249	6.68e-21	98.2
MS.gene005668.t1	MTR_5g076070	28.415	183	116	3	203	382	45	215	3.32e-20	92.4
MS.gene005668.t1	MTR_6g022080	27.439	164	116	1	222	382	84	247	7.69e-18	84.7
MS.gene005668.t1	MTR_8g035530	46.753	77	39	1	210	286	1	75	1.37e-16	75.5
MS.gene005668.t1	MTR_8g468460	40.000	100	57	2	427	526	9	105	1.89e-13	67.8
MS.gene005668.t1	MTR_0402s0040	29.885	174	117	5	226	396	29	200	2.97e-13	73.6
MS.gene005668.t1	MTR_3g450850	30.233	172	108	5	229	388	53	224	5.26e-13	72.0
MS.gene005668.t1	MTR_6g051425	28.261	184	121	5	230	405	24	204	2.98e-12	69.3
MS.gene005668.t1	MTR_4g035820	29.121	182	120	4	229	403	81	260	3.40e-12	70.9
MS.gene005668.t1	MTR_1g008290	31.034	116	75	2	291	406	21	131	2.33e-11	63.2

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene005668.t1	AT4G02980	68.421	152	41	4	8	159	20	164	9.91e-62	207
MS.gene005668.t1	AT5G28530	33.898	177	111	4	229	400	61	236	2.41e-19	93.6
MS.gene005668.t1	AT5G28530	33.898	177	111	4	229	400	61	236	2.56e-19	93.6
MS.gene005668.t1	AT5G28530	33.898	177	111	4	229	400	61	236	3.50e-19	93.2
MS.gene005668.t1	AT5G28530	33.898	177	111	4	229	400	61	236	3.50e-19	93.2
MS.gene005668.t1	AT5G28530	33.898	177	111	4	229	400	61	236	3.75e-19	93.2
MS.gene005668.t1	AT4G38180	29.469	207	132	5	370	571	441	638	3.98e-18	90.1
MS.gene005668.t1	AT4G38180	28.788	264	159	9	170	408	3	262	2.02e-14	78.2
MS.gene005668.t1	AT4G15090	30.516	213	139	5	406	617	452	656	6.01e-18	89.7
MS.gene005668.t1	AT4G15090	30.516	213	139	5	406	617	452	656	6.01e-18	89.7
MS.gene005668.t1	AT4G15090	30.516	213	139	5	406	617	452	656	6.01e-18	89.7
MS.gene005668.t1	AT4G15090	30.516	213	139	5	406	617	452	656	6.01e-18	89.7
MS.gene005668.t1	AT4G15090	30.516	213	139	5	406	617	452	656	6.01e-18	89.7
MS.gene005668.t1	AT3G22170	27.679	224	151	5	406	626	461	676	4.16e-16	83.6
MS.gene005668.t1	AT3G22170	27.679	224	151	5	406	626	461	676	4.16e-16	83.6
MS.gene005668.t1	AT4G38170	26.425	193	136	3	378	567	210	399	2.03e-15	80.9
MS.gene005668.t1	AT2G27110	26.829	246	158	8	368	609	241	468	3.78e-15	80.5
MS.gene005668.t1	AT2G27110	26.829	246	158	8	368	609	386	613	4.43e-15	80.5
MS.gene005668.t1	AT2G27110	26.829	246	158	8	368	609	386	613	4.43e-15	80.5
MS.gene005668.t1	AT1G10240	30.508	177	108	6	229	394	54	226	2.58e-12	71.2
MS.gene005668.t1	AT1G10240	30.508	177	108	6	229	394	54	226	2.58e-12	71.2
MS.gene005668.t1	AT4G19990	25.904	166	121	2	406	571	400	563	2.14e-11	68.6
MS.gene005668.t1	AT4G19990	25.904	166	121	2	406	571	400	563	2.14e-11	68.6
MS.gene005668.t1	AT4G19990	25.904	166	121	2	406	571	343	506	3.02e-11	67.8
MS.gene005668.t1	AT4G19990	25.904	166	121	2	406	571	400	563	3.20e-11	67.8
MS.gene005668.t1	AT1G76320	26.111	180	123	5	395	570	374	547	3.31e-11	67.8
MS.gene005668.t1	AT4G19990	25.904	166	121	2	406	571	400	563	3.37e-11	67.8
MS.gene005668.t1	AT4G19990	25.904	166	121	2	406	571	400	563	3.37e-11	67.8
MS.gene005668.t1	AT1G76320	26.111	180	123	5	395	570	374	547	3.52e-11	67.8
MS.gene005668.t1	AT1G76320	26.111	180	123	5	395	570	374	547	3.52e-11	67.8
MS.gene005668.t1	AT4G19990	25.904	166	121	2	406	571	414	577	3.64e-11	67.8

Find 174 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AAAACTGATCCACCATTATT+TGG	0.155571	1.2:-67256923	None:intergenic
TCAATGTTGATTGTGATATT+TGG	0.171428	1.2:-67256686	None:intergenic
CTCTTGCAAATCAGACTTTC+AGG	0.192125	1.2:-67255897	None:intergenic
TCACTCAATTTACGGTAATT+AGG	0.235603	1.2:-67254598	None:intergenic
CCCATAGTTTCTCAATGTTT+TGG	0.242135	1.2:-67257198	None:intergenic
TATCAACTTCACTCAATTTA+CGG	0.276736	1.2:-67254606	None:intergenic
ATCACTCGCAACAAATTTAC+TGG	0.280329	1.2:-67256150	None:intergenic
AAGTGCTCCTCTGGCTTTCC+AGG	0.290079	1.2:-67250811	None:intergenic
GCATGAGGATTTACAAGTTC+TGG	0.298111	1.2:+67251637	MS.gene005668:CDS
TAACACCATACCCAACATTA+TGG	0.313783	1.2:-67256874	None:intergenic
AGGACTTGGGTTTATCAAAA+AGG	0.326599	1.2:+67254714	MS.gene005668:CDS
CACAAGAATGTCTGTGAATC+GGG	0.333244	1.2:-67250720	None:intergenic
CAGTGTTAGAATGTGATGAT+AGG	0.338987	1.2:-67256970	None:intergenic
TGATAAACCCAAGTCCTTCA+TGG	0.346028	1.2:-67254708	None:intergenic
AGATGATGATATAAGGGATA+TGG	0.347376	1.2:+67254261	MS.gene005668:CDS
GAGGCCACTTACACTTTAAC+TGG	0.349870	1.2:-67251677	None:intergenic
CTCTCTCACGTAACTGTTGC+TGG	0.353397	1.2:+67249599	MS.gene005668:CDS
ACGACTTTGTTCGTACGATT+TGG	0.356788	1.2:+67254509	MS.gene005668:CDS
ACACCAATTCCAGCAAGTTC+TGG	0.360337	1.2:-67256305	None:intergenic
TTATGTAACAGGTTGAAGTA+TGG	0.362149	1.2:+67250668	MS.gene005668:intron
ATGTGACAGATGATGATATA+AGG	0.367162	1.2:+67254254	MS.gene005668:CDS
CTCGGAACATTGTGTGTTCC+AGG	0.370631	1.2:-67257019	None:intergenic
TAAGAGCGCAAGTGATTATA+AGG	0.371814	1.2:+67256049	MS.gene005668:CDS
TGTAAGAACATGTCATATCT+TGG	0.387474	1.2:+67254660	MS.gene005668:CDS
TGTTCTAATTGTAGAAATCC+TGG	0.392101	1.2:+67256263	MS.gene005668:CDS
CACTATGGGGTGCCAAATAA+TGG	0.393131	1.2:+67256911	MS.gene005668:CDS
ATCCATGTTGTCATACTTCA+TGG	0.394339	1.2:-67255868	None:intergenic
ACTGGAACACACAATGTTCC+TGG	0.398163	1.2:+67257001	MS.gene005668:CDS
ATCATTCGCAACAAATTTGT+TGG	0.403036	1.2:-67256177	None:intergenic
TCTAACACTGCTCTGCATAC+TGG	0.407068	1.2:+67256983	MS.gene005668:CDS
TCTGAGAACTTTGGATTAGC+AGG	0.407308	1.2:-67252541	None:intergenic
ATATAATTTCACGGATCATC+AGG	0.409639	1.2:+67254741	MS.gene005668:CDS
GGAATATGAAATGTGCTGTT+TGG	0.410995	1.2:-67250841	None:intergenic
TCCTGTCAACGATGCTCATC+AGG	0.412681	1.2:+67250861	MS.gene005668:CDS
GATTATAAGGAGGCTCTAGA+AGG	0.413898	1.2:+67256062	MS.gene005668:CDS
GATTCATTATCAGACTCAAT+AGG	0.414121	1.2:-67256359	None:intergenic
ATAGGATTCTCTGAGAACTT+TGG	0.416058	1.2:-67252550	None:intergenic
GCACTGGTATTACACGTAAG+AGG	0.418801	1.2:+67256567	MS.gene005668:CDS
AACAAATACAAGCACTAGAA+AGG	0.422563	1.2:+67256646	MS.gene005668:CDS
TGTCCAGAACTTGCTGGAAT+TGG	0.422787	1.2:+67256302	MS.gene005668:CDS
TCTTCATGCTCCTCCATCAC+TGG	0.426700	1.2:+67249392	MS.gene005668:CDS
CCCTCCGATTCTCAGGGAAA+GGG	0.434136	1.2:+67252516	MS.gene005668:intron
TCACAAGAATGTCTGTGAAT+CGG	0.436328	1.2:-67250721	None:intergenic
AAAGTTTAAAGATGTCAAAA+AGG	0.436388	1.2:+67255647	MS.gene005668:CDS
TTCTCAGAGAATCCTATTGT+TGG	0.438739	1.2:+67252556	MS.gene005668:CDS
TACGGTAATTAGGCATCAAA+TGG	0.442752	1.2:-67254588	None:intergenic
TGAATCGGGGTATGTGTTCC+TGG	0.443795	1.2:-67250706	None:intergenic
CGCAGAACAATTAGTTCGAA+TGG	0.445789	1.2:-67254470	None:intergenic
AAGGGTGGCCATGAAGGACT+TGG	0.449428	1.2:+67254700	MS.gene005668:CDS
TAAATTTGTTGCGAGTGATA+AGG	0.460501	1.2:+67256154	MS.gene005668:CDS
AAATGGACATGACGAGGATA+AGG	0.462491	1.2:+67256127	MS.gene005668:CDS
GTAAGAACATGTCATATCTT+GGG	0.464989	1.2:+67254661	MS.gene005668:CDS
GCGTCAATTAGTATGCAATA+AGG	0.467578	1.2:+67254396	MS.gene005668:CDS
GGAAAGATAAAGTGCTCCTC+TGG	0.468250	1.2:-67250820	None:intergenic
AACGCAAAGGAGCTAATTCA+TGG	0.469712	1.2:-67254561	None:intergenic
ACCTGATGAGCATCGTTGAC+AGG	0.470003	1.2:-67250862	None:intergenic
AGTGTTAGAATGTGATGATA+GGG	0.470693	1.2:-67256969	None:intergenic
TTCGAATGGTTAGCGTAGAT+CGG	0.471186	1.2:-67254456	None:intergenic
GAGAGTCATCAGGATAACTA+TGG	0.473031	1.2:+67249566	MS.gene005668:CDS
AATAGCCGTCATGAGGGAAA+TGG	0.477370	1.2:+67256110	MS.gene005668:CDS
CAAGGGAAAGAGAACTTTGA+TGG	0.478759	1.2:+67254214	MS.gene005668:CDS
ACGATAGGATTACCAACAAT+AGG	0.480308	1.2:-67252568	None:intergenic
CGGACGTGTCCAGAACTTGC+TGG	0.483560	1.2:+67256296	MS.gene005668:CDS
AAATATCAGCGAGAGTCATC+AGG	0.485303	1.2:+67249556	MS.gene005668:CDS
AAAGGACTTATATAATTTCA+CGG	0.493961	1.2:+67254732	MS.gene005668:CDS
GAAATCCTGGGCACACAATA+CGG	0.497533	1.2:+67256276	MS.gene005668:CDS
CACTCTGTAGCAGTGTCAAA+TGG	0.499398	1.2:+67256524	MS.gene005668:CDS
ATGTGAAGCGTGATTCTAAT+GGG	0.504223	1.2:+67254362	MS.gene005668:CDS
AATGGTGTGACCCGTGACTT+TGG	0.505092	1.2:+67256803	MS.gene005668:CDS
GCAAGGGTTAAAATACAAGA+TGG	0.508614	1.2:+67254763	MS.gene005668:CDS
TTGTAAATCCTCATGCTCAT+TGG	0.509607	1.2:-67251630	None:intergenic
GGTCAAAAGGGTGGCCATGA+AGG	0.510809	1.2:+67254694	MS.gene005668:CDS
CCACGGGTTTGAAGTAAGAA+AGG	0.512169	1.2:+67254336	MS.gene005668:CDS
TTAGAACAACATCTTGTCCT+TGG	0.513299	1.2:-67256248	None:intergenic
TGTGATGATAGGGTAGTTGT+CGG	0.517812	1.2:-67256959	None:intergenic
ATTTAGTCTGCAACTTGTCA+AGG	0.524883	1.2:-67255785	None:intergenic
CAAGGGTTAAAATACAAGAT+GGG	0.527779	1.2:+67254764	MS.gene005668:CDS
AACAACGATGTTCGTACTGA+TGG	0.529175	1.2:+67254142	MS.gene005668:CDS
AATGAATAACTAACCAGTGA+TGG	0.529200	1.2:-67249405	None:intergenic
AAAGTCTGATTTGCAAGAGA+TGG	0.531904	1.2:+67255901	MS.gene005668:CDS
GATGTGAAGCGTGATTCTAA+TGG	0.532287	1.2:+67254361	MS.gene005668:CDS
ATTCTTGCACGGAATGAAAG+AGG	0.533528	1.2:+67249625	MS.gene005668:CDS
GTTCTAATTGTAGAAATCCT+GGG	0.533951	1.2:+67256264	MS.gene005668:CDS
AAGTGCCCCTCGACGAAACA+TGG	0.534361	1.2:-67255991	None:intergenic
CACGTCCGTATTGTGTGCCC+AGG	0.534840	1.2:-67256281	None:intergenic
ACAAATACAAGCACTAGAAA+GGG	0.535750	1.2:+67256647	MS.gene005668:CDS
CAGGATAACTATGGTAGACC+AGG	0.539517	1.2:+67249575	MS.gene005668:CDS
GTAGTTGTCGGAGGGAATTG+TGG	0.539742	1.2:-67256947	None:intergenic
GTTGCTGGTTCATTCTTGCA+CGG	0.539837	1.2:+67249614	MS.gene005668:CDS
CTGAGAACTTTGGATTAGCA+GGG	0.540885	1.2:-67252540	None:intergenic
AATAAGGAGGGTGTTAATGA+TGG	0.543414	1.2:+67254412	MS.gene005668:CDS
AGCTAATTCATGGTTGTGAG+AGG	0.545517	1.2:-67254551	None:intergenic
ACTTCATGGCACAAATAATG+TGG	0.547507	1.2:-67255854	None:intergenic
CCTCCGATTCTCAGGGAAAG+GGG	0.548956	1.2:+67252517	MS.gene005668:intron
TCGTCATTTGCCTCCCAAGA+AGG	0.555407	1.2:+67255951	MS.gene005668:CDS
AAGACGGCCATTGTGCAAGT+TGG	0.557854	1.2:+67256849	MS.gene005668:CDS
CACTGGTATTACACGTAAGA+GGG	0.559146	1.2:+67256568	MS.gene005668:CDS
GGTGTCGTGTCTGAAGATCA+AGG	0.560464	1.2:+67256323	MS.gene005668:CDS
CGAGATGTTGAGAAAAGCAC+TGG	0.563759	1.2:+67256551	MS.gene005668:CDS
TTCATCATTACCTTCTTGGG+AGG	0.565482	1.2:-67255961	None:intergenic
GTCTGAAGATCAAGGGGAGA+AGG	0.567087	1.2:+67256331	MS.gene005668:CDS
TATTCACATGGGAAGTACCC+TGG	0.569012	1.2:+67250793	MS.gene005668:CDS
TATTGTTTGCAAAATACCAC+GGG	0.573778	1.2:+67254320	MS.gene005668:CDS
CCTTTGACATTCACCATCAG+TGG	0.574175	1.2:-67256200	None:intergenic
GTGGAATTTAACCATGGTAA+TGG	0.576772	1.2:+67254178	MS.gene005668:CDS
GCCACTTACACTTTAACTGG+TGG	0.576988	1.2:-67251674	None:intergenic
GCACAAATAATGTGGGAACA+TGG	0.578248	1.2:-67255846	None:intergenic
TGTGACAGATGATGATATAA+GGG	0.581249	1.2:+67254255	MS.gene005668:CDS
AAATGACCATGTTTCGTCGA+GGG	0.581274	1.2:+67255985	MS.gene005668:CDS
GTGTCGTGTCTGAAGATCAA+GGG	0.581492	1.2:+67256324	MS.gene005668:CDS
GCTAATTCATGGTTGTGAGA+GGG	0.581523	1.2:-67254550	None:intergenic
TCAATTAGTATGCAATAAGG+AGG	0.584633	1.2:+67254399	MS.gene005668:CDS
AATGACCATGTTTCGTCGAG+GGG	0.585541	1.2:+67255986	MS.gene005668:CDS
GCAAGTTGGAACCATAATGT+TGG	0.585606	1.2:+67256863	MS.gene005668:CDS
TAAGATAAATAGCCGTCATG+AGG	0.585792	1.2:+67256103	MS.gene005668:CDS
AGGGTGGCCATGAAGGACTT+GGG	0.586883	1.2:+67254701	MS.gene005668:CDS
GAAGCTTCAAAGATATTCAC+CGG	0.587720	1.2:+67255621	MS.gene005668:CDS
AAGATAAATAGCCGTCATGA+GGG	0.587755	1.2:+67256104	MS.gene005668:CDS
ATACTCACCGGTGTATAACT+CGG	0.588936	1.2:-67257037	None:intergenic
ATGATAGGGTAGTTGTCGGA+GGG	0.591320	1.2:-67256955	None:intergenic
ATTTCACGGATCATCAGGCA+AGG	0.592596	1.2:+67254746	MS.gene005668:CDS
TGGAACCATAATGTTGGGTA+TGG	0.594448	1.2:+67256869	MS.gene005668:CDS
CTTCATGGCACAAATAATGT+GGG	0.594948	1.2:-67255853	None:intergenic
TATGAGTGCGTTGAAGAATG+TGG	0.597255	1.2:+67257140	MS.gene005668:CDS
TATATTGCATCATATTCACA+TGG	0.597374	1.2:+67250781	MS.gene005668:CDS
GAACGAGATGAAGATGAGGA+TGG	0.598765	1.2:+67255702	MS.gene005668:CDS
GTATTGTTTGCAAAATACCA+CGG	0.599210	1.2:+67254319	MS.gene005668:CDS
CAAGTTGGAACCATAATGTT+GGG	0.599464	1.2:+67256864	MS.gene005668:CDS
GTCAATGCAGTTGTCAGCAT+AGG	0.607551	1.2:-67255585	None:intergenic
AAGGGTTAAAATACAAGATG+GGG	0.610552	1.2:+67254765	MS.gene005668:CDS
AAACATCGCAGTGACTATTG+TGG	0.611836	1.2:+67257174	MS.gene005668:CDS
ATTATAAGGAGGCTCTAGAA+GGG	0.613050	1.2:+67256063	MS.gene005668:CDS
GAATAACTAACCAGTGATGG+AGG	0.616256	1.2:-67249402	None:intergenic
GCTACTTTGAGTTACTTCCA+AGG	0.617165	1.2:+67254796	MS.gene005668:CDS
TTGGAACACCAATGAGCATG+AGG	0.617203	1.2:+67251622	MS.gene005668:CDS
GTTGATAAACAAGTTGCTAG+TGG	0.617676	1.2:+67254622	MS.gene005668:CDS
CATGTCCATTTCCCTCATGA+CGG	0.619225	1.2:-67256115	None:intergenic
GATGATAGGGTAGTTGTCGG+AGG	0.619255	1.2:-67256956	None:intergenic
AGTGCTCCTCTGGCTTTCCA+GGG	0.620999	1.2:-67250810	None:intergenic
CATTGAACGAGATGAAGATG+AGG	0.623154	1.2:+67255698	MS.gene005668:CDS
CCACTGATGGTGAATGTCAA+AGG	0.624002	1.2:+67256200	MS.gene005668:CDS
TATGGTTCCAACTTGCACAA+TGG	0.626693	1.2:-67256856	None:intergenic
TTTCACGGATCATCAGGCAA+GGG	0.637022	1.2:+67254747	MS.gene005668:CDS
TCGCTGATATTTCTCACAAG+CGG	0.639352	1.2:-67249545	None:intergenic
CCTTTCTTACTTCAAACCCG+TGG	0.639832	1.2:-67254336	None:intergenic
CATTGCAAACACCATTACCA+TGG	0.642035	1.2:-67254189	None:intergenic
TATGGGGTGCCAAATAATGG+TGG	0.646881	1.2:+67256914	MS.gene005668:CDS
AATGGTGTTTGCAATGAGCA+AGG	0.648235	1.2:+67254196	MS.gene005668:CDS
GCTAGTGGTCTACATTCGCA+AGG	0.649023	1.2:+67254637	MS.gene005668:CDS
ATCAAATGGACAAAACGCAA+AGG	0.651947	1.2:-67254574	None:intergenic
AAAATGACCATGTTTCGTCG+AGG	0.652304	1.2:+67255984	MS.gene005668:CDS
ATGGTGTTTGCAATGAGCAA+GGG	0.657603	1.2:+67254197	MS.gene005668:CDS
TCTGTAGCAGTGTCAAATGG+TGG	0.657609	1.2:+67256527	MS.gene005668:CDS
TGATGGAGATGCAGACGGTG+TGG	0.660310	1.2:+67254159	MS.gene005668:CDS
AAATCTACTCTCAAACAAGA+CGG	0.661253	1.2:+67256833	MS.gene005668:CDS
ACAAGAATGTCTGTGAATCG+GGG	0.664984	1.2:-67250719	None:intergenic
TGTCGTGTCTGAAGATCAAG+GGG	0.668190	1.2:+67256325	MS.gene005668:CDS
ATATTGCATCATATTCACAT+GGG	0.670352	1.2:+67250782	MS.gene005668:CDS
TGCCATGAAGTATGACAACA+TGG	0.671427	1.2:+67255866	MS.gene005668:CDS
ACAGTTACGTGAGAGAGACC+TGG	0.672887	1.2:-67249593	None:intergenic
TGAATGTCAAAGGTGCCCGT+AGG	0.674674	1.2:+67256210	MS.gene005668:CDS
CAATTAGTATGCAATAAGGA+GGG	0.675920	1.2:+67254400	MS.gene005668:CDS
TGTAGACGCTTTGAACGTAG+AGG	0.677604	1.2:+67255819	MS.gene005668:CDS
CAATGTTCCGAGTTATACAC+CGG	0.682160	1.2:+67257030	MS.gene005668:CDS
CATTTGACACTGCTACAGAG+TGG	0.682675	1.2:-67256523	None:intergenic
GAGCGCAAGTGATTATAAGG+AGG	0.683366	1.2:+67256052	MS.gene005668:CDS
TGTTGCGAATGATCCACTGA+TGG	0.687875	1.2:+67256187	MS.gene005668:CDS
GACGGTGTGGAATTTAACCA+TGG	0.688761	1.2:+67254172	MS.gene005668:CDS
TGAGGGAAATGGACATGACG+AGG	0.691164	1.2:+67256121	MS.gene005668:CDS
GAAGTACCCTGGAAAGCCAG+AGG	0.703922	1.2:+67250804	MS.gene005668:CDS
CGTACTGATGGAGATGCAGA+CGG	0.711480	1.2:+67254154	MS.gene005668:CDS
ACATAGACTATTGAACGCAG+CGG	0.718507	1.2:-67256015	None:intergenic
AATTATGCAAGAAATCCACA+AGG	0.743577	1.2:-67255494	None:intergenic
GGATATGGAATTCAACACAG+AGG	0.763384	1.2:+67254276	MS.gene005668:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content

Chromosome	Type	Strat	End	Strand	Name
chr1.2	gene	67249317	67257209	67249317	ID=MS.gene005668
chr1.2	mRNA	67249317	67257209	67249317	ID=MS.gene005668.t1;Parent=MS.gene005668
chr1.2	exon	67249317	67249413	67249317	ID=MS.gene005668.t1.exon1;Parent=MS.gene005668.t1
chr1.2	CDS	67249317	67249413	67249317	ID=cds.MS.gene005668.t1;Parent=MS.gene005668.t1
chr1.2	exon	67249540	67249646	67249540	ID=MS.gene005668.t1.exon2;Parent=MS.gene005668.t1
chr1.2	CDS	67249540	67249646	67249540	ID=cds.MS.gene005668.t1;Parent=MS.gene005668.t1
chr1.2	exon	67250679	67250882	67250679	ID=MS.gene005668.t1.exon3;Parent=MS.gene005668.t1
chr1.2	CDS	67250679	67250882	67250679	ID=cds.MS.gene005668.t1;Parent=MS.gene005668.t1
chr1.2	exon	67251620	67251687	67251620	ID=MS.gene005668.t1.exon4;Parent=MS.gene005668.t1
chr1.2	CDS	67251620	67251687	67251620	ID=cds.MS.gene005668.t1;Parent=MS.gene005668.t1
chr1.2	exon	67252531	67252577	67252531	ID=MS.gene005668.t1.exon5;Parent=MS.gene005668.t1
chr1.2	CDS	67252531	67252577	67252531	ID=cds.MS.gene005668.t1;Parent=MS.gene005668.t1
chr1.2	exon	67254125	67254817	67254125	ID=MS.gene005668.t1.exon6;Parent=MS.gene005668.t1
chr1.2	CDS	67254125	67254817	67254125	ID=cds.MS.gene005668.t1;Parent=MS.gene005668.t1
chr1.2	exon	67255454	67256394	67255454	ID=MS.gene005668.t1.exon7;Parent=MS.gene005668.t1
chr1.2	CDS	67255454	67256394	67255454	ID=cds.MS.gene005668.t1;Parent=MS.gene005668.t1
chr1.2	exon	67256491	67256712	67256491	ID=MS.gene005668.t1.exon8;Parent=MS.gene005668.t1
chr1.2	CDS	67256491	67256712	67256491	ID=cds.MS.gene005668.t1;Parent=MS.gene005668.t1
chr1.2	exon	67256803	67257051	67256803	ID=MS.gene005668.t1.exon9;Parent=MS.gene005668.t1
chr1.2	CDS	67256803	67257051	67256803	ID=cds.MS.gene005668.t1;Parent=MS.gene005668.t1
chr1.2	exon	67257138	67257209	67257138	ID=MS.gene005668.t1.exon10;Parent=MS.gene005668.t1
chr1.2	CDS	67257138	67257209	67257138	ID=cds.MS.gene005668.t1;Parent=MS.gene005668.t1

Gene Sequence

>MS.gene005668

ATGGTAGAACGTGACGTGATCGCGACATTGTTGCTTAGTTTCATCTCATTTTCTTCAATCGTTTTCGCTTCTTCTTCTTCATGCTCCTCCATCACTGGTTAGTTATTCATTTCTCTTCTCATGCTTCTTTTTCCCCTTTTCAATTGCTCTGTCAAAGTTTTTATTAGGTTTTTGCTGATTTGAACTTGTTATTCCTTCATTTTCGGAATCAACAATTACCCAGGGTTACCGCTTGTGAGAAATATCAGCGAGAGTCATCAGGATAACTATGGTAGACCAGGTCTCTCTCACGTAACTGTTGCTGGTTCATTCTTGCACGGAATGAAAGAGGTATTGAATCCAACTTATTCACCATTCTTGTACCACATTTTACTTCATAATGTTATTTCAAGTAGCGTCTGTTTGGATTGACTTATTTGAGTTTATTTACTGGTATAAAGTATAAACACCAGTGAGACCGTTTGGCAGAACTTATGAAAAATAAGATTGTGTTGGGTTCAGCCCATTGTTTTACAAATAAGACCACATATCAATCCGGAGACCTCTAGGTCACGGTTCAATAGGTTCAACTTCGGTTGAATCAGATGGCAAATAAATAAACTAATAAAAAGTAATCTAATAAATTAAAAATGCAAAACGAAAACTAATTGAACCAAGTACCGGCCAGTTTGTCAGTTGGTTTGATCTTGGTTTACCGCAATCCGGTTGAACCATCAGGCCCAGTCCGGTTTTTAAATTAACGGTTCAAACTTTTTCTTAGACTTCGTCATGACTACAACTTTTAGGTTGTCCTTTATAATTTTATTTGACGCAAAATAACAAATGTACTATCATAGAGTATGAAGTTATTACTAGAATATTTAGTAGATTAAGCAAACATGCTGTCAAATTGTCTTACATGATAGGTTTCAAGTGGTGAATGTAGAGAGGAGTTAAGTAGTTAACTAAAGGAGCGACAGAGTTGGCACAATTTGGATTACTTTCTAGTTTGTTGAAACTTCTCAACTGAGATAAGCATTTGGTTCCTGATTTATGTAAACGTTCTTAGAAATTTATAGGTGGTTGTGGAGAAGTTAAATGAGAGGTGCTTATGAAAAAGTCGAGGTGGACAGGCTAACTTAGTAGTTCATTGCAAGATTATTTCATCTTTTCTTTTTCTACATGTGCCTGTTGAAAGCTTTATCCAAACCGGTTCTATGCGTAACACTTGGGCTCACACCTTTTGTTTATTGGAACAGAAGATTTGTTGTTGATACTTGATAGTTACACTATATTTTCTAGTTGAAAAACAGATCATTTAAGGTCTTGCATCATGTTTTTCAAGCTTTGTGTGGTCATTTTTGTGAACTTTTTATGTAACAGGTTGAAGTATGGCTTCAAACATTTTCACCAGGAACACATACCCCGATTCACAGACATTCTTGTGAAGAAGTTTTTATTGTTCAAAAAGGCAGTGGCACTCTTTATATTGCATCATATTCACATGGGAAGTACCCTGGAAAGCCAGAGGAGCACTTTATCTTTCCAAACAGCACATTTCATATTCCTGTCAACGATGCTCATCAGGTAAACCATTAACTACTGTGAGATTTTACCATCTTGATTTAGTTGGATGCTAGGATCTTTGTCCACACGTGCATAGACACATATGAAATTTGAATATGTAAAACTTAGCATGTCTGGCTGTAAGTAATGCATGCAATTGTTGCTTAGTAAACAAAGAGAATGCTAACTTGATAAAGAAAGGTTATATTGAGTGTCTTTATGTTTTGCTCAGAGTTTTGCTTTAAGGGTTAGGGAGACCTCATGTTTAACATCTAAGCTTTTACTTGAGAAATTATAGCAGGCCAACATGTAGAGTTGAGCACACCTTGTCAACTGTGAACTGTAACTAGTGAGCTGATTGAAAGAGTACAAGTTCTGGTATGGTCTATGTACAGACTTCAGATTCAAATGATGTCTAAATAAATGTAAGTTGGTCGGAGTGAAGTAACTCTTAGGAGTTTGTTAGGAACTTCTTAACTGAAAGGCAGGATATCCGTAGATTGTTTCGAATATATAAAATAATGCATGCCCAATAAGATGGAACTTCTTTAGTTTTTTCTCTTTGCCAAGACTTGAACCCTGGACCTCCAACTCCTTAACCCTTAGCTCAAACTAGTTGAGCTACCCAACCCCCCCAACATTAGCAAATGAATGATGCACATTTCTTTAGATAATAAACTTAACATATTTCTAACTTGTTCTTCGGTTACTCTGGTCCCCCTCTATTTTTACATAACTATGGAGAATATGCTTTGCAGCTTTGGAACACCAATGAGCATGAGGATTTACAAGTTCTGGTTATAATATCTCGTCCACCAGTTAAAGTGTAAGTGGCCTCTAGTCTCATTCTCATTGGATTGCATGCTTTACTAATGAGGTGATAGTTGTGACACTTAACTTCAGAAACAAAAGATGATAGTGGTGGTGACTCTTGTCTGGCTCTTAAAAATATAGCAAACTACTAAAAAAGCATTCTTAGTTCTTAGTAACTTGGTTGATGGTATCCCAAAAACGCGTGTATTAACCTTGGCATTTCACGTTCGATAGATTATACATTGGTTTTTACTCATGCTTTTTAAACTTCATGGTGTTTTTTTATGCAGTATTTAAAAATGAGAAATGCTAACGAGTGCCCCTGGGGCACTCTTTAAGGTCTTTAAATGGTAACTTTGTCCGAAAATATGTGTAATCAATGCATTGGAAATTGAAATATTTGACCTTTTTATGAAATAATTTCTTGTTTTGTAATCCTTAAAGAGTGCCAAGACTTCCCCGAGGGCACTCGTTAGCAAGACCCTTTAAAAATTCATATTAAATGGGTGCATTGAATTGCATTCTTTTACCCGTATCACATTGTCTTTGCCTACTTTGTTCTGCAGTCAAATAAAATAAGATGCTTAGTTTGAAGTCAATATCCTGAGGTTCTTTAAAGATTGAACTGCAATGTCCCATATCGGCAGTGTGTGGGGGGGGGGGGGGGGGGGGGGGGCTAAGATTGATTTTGTTGAGGTGGCCACCAATTTAACAAATATATATAAAACTATTTCAAATAAAAGCCAAATCAATTTGTTGGCCTGGTGGAAACTTTAGACGGATTTTTACACTCAAGAAGTGGGTGCTACACCTAACTAGAACATTTTAATTTTGGTGTTTGCCCTCCGATTCTCAGGGAAAGGGGCCCTGCTAATCCAAAGTTCTCAGAGAATCCTATTGTTGGTAATCCTATCGTGCTATTTCTTGATTTGAAACCTAGTTTCAAATTGAATCCTAGTTTACACAAATTTCTTGATCTGAAACCTATCGTAAAATCCTAGTTTACACAAATTGAATCCTATCGTGCTATTTCTTGATTTGATTTACACAAATTGAATCCTAGTTTCTTGATCTGAAACCTATCGTGAGAATCCTATCATGCTATTTCAAAATATTTAGGGGCTAAATTGAATGGTTGTTACAAATTTGCATGCCATTACCAACATATCAATCCACTCACTTTGATCAAATCCAACAAGCTATGAATGTTTATAAAGTAAACTTGAGCTCTTCAATAATGTTGTAGAGTTTATTTCTGATCCCTTCTATGTATGTTTGGTCCCCTTATTTCCATAATGTCTTCAACTTCTCTGATACATGCACACACATGCATATATATCAAATAAGGTTCACATAATGCTAATTCATCAAACAACATCAATTTGATAAAAAAAAAGCATTAAAAGAGGATGCAAAAGAGGAACTTGAATCTCAAATCCATTGATCACTTGCCTTTCTATCTAAAAGCATTAAAAGTGGACTCTCTAGATTGACAGAGATGCAAAACAACATAGATTATATAATAGGATCGTAACACATAACAATTAACTGAAAAACAGAACCATATGAAAAATATAAAAACACCAGCTACTAAACCAGAACAGAAACTGCTATCAGTACATGAAATTGCTCATATAGACTTAAATGCTCCTAAAACTTTTTAACTTCAGAAACAAGGATGATTTTTACTACAAGAAAACATATATCAGTTACAAGGGTCAAGAGATAAGACAATATATCAGAGTAAATTAGACTCAATTCAGAATTCACTGCTGCAAAAATGATTTTTCTCTTGAAGACTCGATATATGTCATGTCAAAGTAAATTTTGCACATCTAGTCATTAACATATATCAGAAATGTTATTCTTAATAACATGCATTTTTTTTATATATGCGTATATACACTATACGCCTGATCAAACAATTATAATAGATAGCAGGTGGATTTTTTGTTAAATAAAGTAGGCCTAAATACAAATGTACCATGGCCCCCATATCCATAAGATACAATCTAACATTTGTATATACTTTCAAAACTAAGAACTAACACGAGTTAATTGTTCATTAAAATCTAACAAAAGGGCTATGGCTAACAAGGATACTATAATGTTATAGCCCATTTACCTTAGATAATAGTTCAATCCTGCACTGCCTGCCTACATCTTTCTCTTTTTATAGTCTAATTGGCTCCAAGTCATCACCCTATATGACTTGTAGTATTTCTCACAATGATTAACTAATCATCACTATAATGTGTTTTTTGTAGGTTATAATTTTAAAATGTCTACATATAGTGAAGCAACATTGCCTTTTGATGTACATAGTGATACAGATGAGGTGGAATTTAATAGTGTTAATGATATTGACACTGATAGTGATACAGATGGGGTGGAATTTAATAGTGTTAATGATGTTGACACTGATAGTGACACTGATAGTGATACTGAAGATATAAAAGTCAATAGCAACAACGATGTTCGTACTGATGGAGATGCAGACGGTGTGGAATTTAACCATGGTAATGGTGTTTGCAATGAGCAAGGGAAAGAGAACTTTGATGGCTACAAATGCATCAGTGATGTGACAGATGATGATATAAGGGATATGGAATTCAACACAGAGGATGAAGCTATAAAGTTTTATGTATTGTTTGCAAAATACCACGGGTTTGAAGTAAGAAAGGATGATGTGAAGCGTGATTCTAATGGGAACATTATTATGCGTCAATTAGTATGCAATAAGGAGGGTGTTAATGATGGAAAAAATAAGAAGAATGGCAGCCGATCTACGCTAACCATTCGAACTAATTGTTCTGCGAAACTTCGAGTAGTCTACGACTTTGTTCGTACGATTTGGAGAGTTTCTATTTTCAAACCCTCTCACAACCATGAATTAGCTCCTTTGCGTTTTGTCCATTTGATGCCTAATTACCGTAAATTGAGTGAAGTTGATAAACAAGTTGCTAGTGGTCTACATTCGCAAGGTGTAAGAACATGTCATATCTTGGGTTTTTTGATGGGTCAAAAGGGTGGCCATGAAGGACTTGGGTTTATCAAAAAGGACTTATATAATTTCACGGATCATCAGGCAAGGGTTAAAATACAAGATGGGGATACTTTTGCTACTTTGAGTTACTTCCAAGGTAAGGCTGATACTGATACATCATTCTTTTCAGAGTTTACATTTACAGATGATGGACGCCTAGAAAACATTTTTTGGGCAGATTCTACTAGTAGGTTTGACTATGAGTGTTTTGGCGATGTTGTTGCATTTGACACCACCTATAGAAAGAACAAGTATGGAAAACCCCTTGTCATTTTTAGTGGATATAACCACCATGGAGAAACAACCATTTTTGCTTGTGCTTTAATTTGTGATGAAACAATAGAGACATACAAGTGGGTTCTAAATTTGTTTTCAAAGGCCATGTATGACAAACATCCAAAAGCGGTGATTACTGATGGGGATAAATCAATGAGAAAAGCTATCAGAGTTGTGTTTCCAAATACAAGGCATCGCCTTTGCGCCTGGCATTTGCATCGAAATGCTGTTCAACATGTGAAGAATTCAAAATTTTTAGAAGAGTTCAAGTCACTGATGTATTCTCCTTGTACACCTGAAAAGTTTGAATCTGAGTGGAAGAGGGTTGTTGAAAATTTTGACCTATCAAACAACAGGTGGGTAAAAAAAATTTATCGGTTGAAGAGAATGTGGGCAAGTGCATACATGCGAGACCATTTTTTGTGTGGTGTTAGAACGACATCAATCTGTGAAGGAGTGAATTCATTTATCAAGAAGTATGTCCGACACAAAAACAGCCTTGTGGATTTCTTGCATAATTTTGAAAGAGCTCTCAAAGAATACAGACATAATGAATTATTGTCTGATTTCAAGTCGTTCTATTATCATCCTATGCTGACAACTGCATTGACTACTTTTGAGTCTGAAGCTTCAAAGATATTCACCGGTAAAAAGTTTAAAGATGTCAAAAAGGCGATAGAGGATGTTGTTGCATTATCAGTCATTGAACGAGATGAAGATGAGGATGGAAACATTGTCATTTTCAAGGTTAATGTATTTGGCAAAAAAGATGTAGCTTTTTCGGTATACCTTGACAAGTTGCAGACTAAATTTTTATGTGATTGTAGACGCTTTGAACGTAGAGGACTGCCATGTTCCCACATTATTTGTGCCATGAAGTATGACAACATGGATGTGTTTCCTGAAAGTCTGATTTGCAAGAGATGGACAAAGACTGCAAAGAGTGATCACATCTCGTCATTTGCCTCCCAAGAAGGTAATGATGAAAAAATGACCATGTTTCGTCGAGGGGCACTTGCCGCTGCGTTCAATAGTCTATGTGATGTTTCGTGTAAGAGCGCAAGTGATTATAAGGAGGCTCTAGAAGGGATTTATAGTCTGTGTAATAAGATAAATAGCCGTCATGAGGGAAATGGACATGACGAGGATAAGGCCAGTAAATTTGTTGCGAGTGATAAGGCCAACAAATTTGTTGCGAATGATCCACTGATGGTGAATGTCAAAGGTGCCCGTAGGAGTAAAAAGTCAACACCAAGGACAAGATGTTGTTCTAATTGTAGAAATCCTGGGCACACAATACGGACGTGTCCAGAACTTGCTGGAATTGGTGTCGTGTCTGAAGATCAAGGGGAGAAGGCTTCACCTATTGAGTCTGATAATGAATCAAAAAGTTTAAGTGTAAGTTGATTATAGTGCATTTCTTGTTATTTTATTTGTTTAATCTGCAAATGAATTTGAAATTGTATATGATATTTTGGTTTATTTCATGTCCAGCTGTCTATGAGTAATGATATGAATGATGACATCCACTCTGTAGCAGTGTCAAATGGTGGACGAGATGTTGAGAAAAGCACTGGTATTACACGTAAGAGGGAATGTGACAATGTTGCATTTTCAACACAAGACTCTGTCAACAAAAGAAAAACAAAAACAAATACAAGCACTAGAAAGGGTGATGCTTGTGTGACTCCAAATATCACAATCAACATTGATAATGTAATACCTTTGTTATAGTATATTTGCTGAAAATTGTGTTGCTTTGGAATATTATATGTTTACTTCTTTATTTTGTTTTGATTGTTGTAGAATGGTGTGACCCGTGACTTTGGACATGAAAAATCTACTCTCAAACAAGACGGCCATTGTGCAAGTTGGAACCATAATGTTGGGTATGGTGTTAATTATTTTAATATGCACTATGGGGTGCCAAATAATGGTGGATCAGTTTTTCCACAATTCCCTCCGACAACTACCCTATCATCACATTCTAACACTGCTCTGCATACTGGAACACACAATGTTCCTGGAACACACAATGTTCCGAGTTATACACCGGTGAGTATTTTGATTGTTTAGTTTATTAATTGTATTTAATTTGATTATTTTTAATACTTCTGATAATTTTCCTATATTTAAAACAGTTTATGAGTGCGTTGAAGAATGTGGAGCTGTTAGCAAAACATCGCAGTGACTATTGTGGACCAAAACATTGA

Protein sequence

>MS.gene005668.t1

MVERDVIATLLLSFISFSSIVFASSSSCSSITGLPLVRNISESHQDNYGRPGLSHVTVAGSFLHGMKEVEVWLQTFSPGTHTPIHRHSCEEVFIVQKGSGTLYIASYSHGKYPGKPEEHFIFPNSTFHIPVNDAHQLWNTNEHEDLQVLVIISRPPVKVERGPANPKFSENPIVDIKVNSNNDVRTDGDADGVEFNHGNGVCNEQGKENFDGYKCISDVTDDDIRDMEFNTEDEAIKFYVLFAKYHGFEVRKDDVKRDSNGNIIMRQLVCNKEGVNDGKNKKNGSRSTLTIRTNCSAKLRVVYDFVRTIWRVSIFKPSHNHELAPLRFVHLMPNYRKLSEVDKQVASGLHSQGVRTCHILGFLMGQKGGHEGLGFIKKDLYNFTDHQARVKIQDGDTFATLSYFQVNSFIKKYVRHKNSLVDFLHNFERALKEYRHNELLSDFKSFYYHPMLTTALTTFESEASKIFTGKKFKDVKKAIEDVVALSVIERDEDEDGNIVIFKVNVFGKKDVAFSVYLDKLQTKFLCDCRRFERRGLPCSHIICAMKYDNMDVFPESLICKRWTKTAKSDHISSFASQEGNDEKMTMFRRGALAAAFNSLCDVSCKSASDYKEALEGIYSLCNKINSRHEGNGHDEDKASKFVASDKANKFVANDPLMVNVKGARRSKKSTPRTRCCSNCRNPGHTIRTCPELAGIGVVSEDQGEKASPIESDNESKSLSLSMSNDMNDDIHSVAVSNGGRDVEKSTGITRKRECDNVAFSTQDSVNKRKTKTNTSTRKGDACVTPNITINIDNNGVTRDFGHEKSTLKQDGHCASWNHNVGYGVNYFNMHYGVPNNGGSVFPQFPPTTTLSSHSNTALHTGTHNVPGTHNVPSYTPFMSALKNVELLAKHRSDYCGPKH