Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005765.t1 | XP_013469281.1 | 88.8 | 508 | 44 | 3 | 1 | 508 | 57 | 551 | 1.50E-258 | 901.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005765.t1 | Q84K00 | 35.8 | 537 | 234 | 18 | 2 | 496 | 58 | 525 | 5.5e-68 | 260.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005765.t1 | A0A072VMT5 | 88.8 | 508 | 44 | 3 | 1 | 508 | 57 | 551 | 1.1e-258 | 901.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene005765.t1 | TF | NAC |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005765.t1 | MTR_1g090723 | 88.780 | 508 | 44 | 3 | 1 | 508 | 57 | 551 | 0.0 | 913 |
| MS.gene005765.t1 | MTR_1g090723 | 82.299 | 548 | 44 | 4 | 1 | 508 | 57 | 591 | 0.0 | 893 |
| MS.gene005765.t1 | MTR_1g090723 | 82.149 | 549 | 44 | 5 | 1 | 508 | 57 | 592 | 0.0 | 889 |
| MS.gene005765.t1 | MTR_1g090723 | 86.603 | 418 | 43 | 3 | 91 | 508 | 10 | 414 | 0.0 | 724 |
| MS.gene005765.t1 | MTR_1g090723 | 79.039 | 458 | 43 | 4 | 91 | 508 | 10 | 454 | 0.0 | 704 |
| MS.gene005765.t1 | MTR_0036s0150 | 61.310 | 504 | 134 | 10 | 1 | 501 | 54 | 499 | 0.0 | 574 |
| MS.gene005765.t1 | MTR_8g063550 | 55.000 | 140 | 56 | 2 | 1 | 133 | 54 | 193 | 6.43e-50 | 174 |
| MS.gene005765.t1 | MTR_8g063550 | 55.000 | 140 | 56 | 2 | 1 | 133 | 54 | 193 | 2.48e-49 | 175 |
| MS.gene005765.t1 | MTR_8g063550 | 55.000 | 140 | 56 | 2 | 1 | 133 | 54 | 193 | 2.74e-49 | 176 |
| MS.gene005765.t1 | MTR_8g093580 | 51.429 | 140 | 61 | 2 | 1 | 133 | 54 | 193 | 5.16e-46 | 167 |
| MS.gene005765.t1 | MTR_3g096140 | 57.258 | 124 | 52 | 1 | 2 | 124 | 56 | 179 | 5.72e-46 | 162 |
| MS.gene005765.t1 | MTR_1g090720 | 58.219 | 146 | 53 | 3 | 2 | 140 | 91 | 235 | 8.19e-46 | 167 |
| MS.gene005765.t1 | MTR_3g096140 | 57.258 | 124 | 52 | 1 | 2 | 124 | 35 | 158 | 1.83e-45 | 162 |
| MS.gene005765.t1 | MTR_3g096140 | 57.258 | 124 | 52 | 1 | 2 | 124 | 56 | 179 | 2.90e-45 | 162 |
| MS.gene005765.t1 | MTR_1g097300 | 58.197 | 122 | 50 | 1 | 2 | 122 | 68 | 189 | 5.37e-40 | 152 |
| MS.gene005765.t1 | MTR_2g064090 | 51.908 | 131 | 60 | 2 | 2 | 129 | 55 | 185 | 5.45e-37 | 140 |
| MS.gene005765.t1 | MTR_3g064580 | 59.130 | 115 | 44 | 2 | 2 | 113 | 55 | 169 | 3.93e-36 | 142 |
| MS.gene005765.t1 | MTR_3g109340 | 58.333 | 108 | 43 | 1 | 3 | 108 | 70 | 177 | 1.71e-35 | 136 |
| MS.gene005765.t1 | MTR_6g477900 | 58.654 | 104 | 42 | 1 | 2 | 104 | 55 | 158 | 4.21e-35 | 131 |
| MS.gene005765.t1 | MTR_5g076850 | 52.985 | 134 | 55 | 3 | 2 | 127 | 55 | 188 | 4.36e-34 | 136 |
| MS.gene005765.t1 | MTR_3g109340 | 57.407 | 108 | 43 | 2 | 3 | 108 | 70 | 176 | 1.78e-33 | 130 |
| MS.gene005765.t1 | MTR_4g108760 | 53.636 | 110 | 46 | 2 | 3 | 108 | 65 | 173 | 2.61e-32 | 127 |
| MS.gene005765.t1 | MTR_3g435150 | 44.375 | 160 | 79 | 6 | 3 | 156 | 64 | 219 | 3.91e-32 | 125 |
| MS.gene005765.t1 | MTR_6g084430 | 57.447 | 94 | 39 | 1 | 10 | 103 | 60 | 152 | 9.49e-32 | 125 |
| MS.gene005765.t1 | MTR_1g008740 | 52.778 | 108 | 49 | 1 | 3 | 108 | 62 | 169 | 3.57e-31 | 124 |
| MS.gene005765.t1 | MTR_1g008740 | 52.778 | 108 | 49 | 1 | 3 | 108 | 76 | 183 | 4.05e-31 | 124 |
| MS.gene005765.t1 | MTR_3g093040 | 54.808 | 104 | 46 | 1 | 1 | 103 | 156 | 259 | 4.10e-31 | 122 |
| MS.gene005765.t1 | MTR_5g069030 | 53.398 | 103 | 47 | 1 | 1 | 102 | 73 | 175 | 6.92e-31 | 127 |
| MS.gene005765.t1 | MTR_7g011130 | 40.000 | 175 | 81 | 4 | 5 | 155 | 69 | 243 | 1.22e-30 | 122 |
| MS.gene005765.t1 | MTR_7g011120 | 44.828 | 145 | 68 | 3 | 5 | 138 | 58 | 201 | 1.26e-30 | 121 |
| MS.gene005765.t1 | MTR_3g093050 | 54.808 | 104 | 46 | 1 | 1 | 103 | 70 | 173 | 1.45e-30 | 125 |
| MS.gene005765.t1 | MTR_3g093050 | 54.808 | 104 | 46 | 1 | 1 | 103 | 70 | 173 | 1.91e-30 | 125 |
| MS.gene005765.t1 | MTR_3g070030 | 39.521 | 167 | 96 | 2 | 5 | 166 | 69 | 235 | 3.46e-29 | 118 |
| MS.gene005765.t1 | MTR_5g014300 | 50.926 | 108 | 44 | 2 | 2 | 102 | 55 | 160 | 4.74e-29 | 117 |
| MS.gene005765.t1 | MTR_6g012670 | 50.485 | 103 | 46 | 2 | 10 | 108 | 75 | 176 | 6.15e-29 | 117 |
| MS.gene005765.t1 | MTR_2g078700 | 50.459 | 109 | 49 | 2 | 3 | 106 | 71 | 179 | 1.44e-28 | 117 |
| MS.gene005765.t1 | MTR_7g005280 | 46.341 | 123 | 62 | 3 | 10 | 129 | 67 | 188 | 3.67e-28 | 113 |
| MS.gene005765.t1 | MTR_2g079990 | 49.000 | 100 | 50 | 1 | 10 | 108 | 71 | 170 | 4.11e-28 | 115 |
| MS.gene005765.t1 | MTR_4g035590 | 50.538 | 93 | 44 | 1 | 10 | 102 | 66 | 156 | 9.02e-28 | 114 |
| MS.gene005765.t1 | MTR_4g081870 | 49.020 | 102 | 47 | 2 | 10 | 106 | 64 | 165 | 1.27e-27 | 112 |
| MS.gene005765.t1 | MTR_2g062730 | 47.788 | 113 | 52 | 3 | 10 | 121 | 68 | 174 | 1.34e-27 | 113 |
| MS.gene005765.t1 | MTR_8g024480 | 47.573 | 103 | 44 | 1 | 10 | 102 | 73 | 175 | 2.08e-27 | 114 |
| MS.gene005765.t1 | MTR_6g032770 | 50.467 | 107 | 46 | 3 | 3 | 103 | 66 | 171 | 4.41e-27 | 112 |
| MS.gene005765.t1 | MTR_3g070040 | 40.645 | 155 | 86 | 2 | 18 | 166 | 68 | 222 | 6.43e-27 | 111 |
| MS.gene005765.t1 | MTR_2g064470 | 52.083 | 96 | 42 | 2 | 10 | 102 | 64 | 158 | 4.90e-26 | 108 |
| MS.gene005765.t1 | MTR_4g101680 | 45.192 | 104 | 56 | 1 | 10 | 113 | 65 | 167 | 5.87e-26 | 109 |
| MS.gene005765.t1 | MTR_4g036030 | 51.064 | 94 | 43 | 2 | 10 | 102 | 65 | 156 | 5.94e-26 | 108 |
| MS.gene005765.t1 | MTR_8g076110 | 43.860 | 114 | 60 | 3 | 10 | 121 | 64 | 175 | 1.11e-25 | 107 |
| MS.gene005765.t1 | MTR_4g098630 | 50.476 | 105 | 48 | 3 | 2 | 102 | 55 | 159 | 1.14e-25 | 107 |
| MS.gene005765.t1 | MTR_5g012080 | 50.000 | 94 | 46 | 1 | 10 | 102 | 65 | 158 | 1.33e-25 | 108 |
| MS.gene005765.t1 | MTR_8g059170 | 46.078 | 102 | 52 | 1 | 10 | 108 | 69 | 170 | 1.39e-25 | 107 |
| MS.gene005765.t1 | MTR_5g041940 | 48.485 | 99 | 44 | 2 | 10 | 102 | 58 | 155 | 1.74e-25 | 105 |
| MS.gene005765.t1 | MTR_3g088110 | 49.000 | 100 | 46 | 3 | 10 | 105 | 62 | 160 | 3.97e-25 | 105 |
| MS.gene005765.t1 | MTR_2157s0010 | 45.536 | 112 | 46 | 3 | 10 | 107 | 63 | 173 | 4.56e-25 | 104 |
| MS.gene005765.t1 | MTR_7g085260 | 47.706 | 109 | 48 | 3 | 3 | 103 | 65 | 172 | 6.95e-25 | 106 |
| MS.gene005765.t1 | MTR_5g021710 | 48.387 | 93 | 47 | 1 | 10 | 102 | 66 | 157 | 7.93e-25 | 105 |
| MS.gene005765.t1 | MTR_1g096430 | 46.078 | 102 | 52 | 2 | 10 | 110 | 65 | 164 | 1.48e-24 | 104 |
| MS.gene005765.t1 | MTR_1g069805 | 51.579 | 95 | 41 | 3 | 10 | 102 | 65 | 156 | 1.90e-24 | 103 |
| MS.gene005765.t1 | MTR_2g086880 | 48.913 | 92 | 41 | 1 | 8 | 99 | 72 | 157 | 2.25e-24 | 107 |
| MS.gene005765.t1 | MTR_2g086880 | 48.913 | 92 | 41 | 1 | 8 | 99 | 72 | 157 | 2.29e-24 | 106 |
| MS.gene005765.t1 | MTR_2g079990 | 38.281 | 128 | 50 | 1 | 10 | 108 | 71 | 198 | 3.16e-24 | 104 |
| MS.gene005765.t1 | MTR_7g097090 | 51.613 | 93 | 40 | 3 | 10 | 100 | 65 | 154 | 4.65e-24 | 102 |
| MS.gene005765.t1 | MTR_8g094580 | 47.000 | 100 | 47 | 3 | 10 | 104 | 8 | 106 | 8.56e-24 | 100 |
| MS.gene005765.t1 | MTR_7g100990 | 44.660 | 103 | 50 | 2 | 10 | 105 | 66 | 168 | 1.23e-23 | 102 |
| MS.gene005765.t1 | MTR_7g085220 | 43.519 | 108 | 47 | 3 | 10 | 103 | 63 | 170 | 1.74e-23 | 101 |
| MS.gene005765.t1 | MTR_8g094580 | 46.535 | 101 | 48 | 3 | 10 | 105 | 62 | 161 | 2.19e-23 | 100 |
| MS.gene005765.t1 | MTR_3g096920 | 47.000 | 100 | 48 | 3 | 10 | 105 | 62 | 160 | 5.27e-23 | 99.4 |
| MS.gene005765.t1 | MTR_4g075980 | 43.269 | 104 | 52 | 2 | 5 | 105 | 65 | 164 | 3.19e-22 | 97.4 |
| MS.gene005765.t1 | MTR_2g080010 | 42.727 | 110 | 49 | 3 | 10 | 105 | 70 | 179 | 3.58e-22 | 98.2 |
| MS.gene005765.t1 | MTR_3g116070 | 52.439 | 82 | 35 | 2 | 1 | 80 | 72 | 151 | 5.40e-22 | 97.8 |
| MS.gene005765.t1 | MTR_4g089135 | 38.462 | 130 | 54 | 2 | 2 | 105 | 62 | 191 | 9.73e-22 | 96.7 |
| MS.gene005765.t1 | MTR_2g093810 | 42.718 | 103 | 52 | 2 | 10 | 105 | 69 | 171 | 1.59e-21 | 95.9 |
| MS.gene005765.t1 | MTR_8g467490 | 34.559 | 136 | 69 | 4 | 6 | 124 | 65 | 197 | 3.40e-21 | 95.9 |
| MS.gene005765.t1 | MTR_5g040420 | 40.541 | 111 | 55 | 3 | 6 | 105 | 65 | 175 | 7.75e-21 | 94.7 |
| MS.gene005765.t1 | MTR_4g134460 | 42.708 | 96 | 53 | 2 | 10 | 104 | 109 | 203 | 1.85e-20 | 94.4 |
| MS.gene005765.t1 | MTR_6g011860 | 35.200 | 125 | 64 | 3 | 10 | 120 | 70 | 191 | 2.45e-20 | 93.2 |
| MS.gene005765.t1 | MTR_2g068880 | 40.000 | 115 | 53 | 2 | 10 | 108 | 78 | 192 | 1.60e-19 | 89.7 |
| MS.gene005765.t1 | MTR_7g070140 | 50.685 | 73 | 34 | 1 | 10 | 80 | 19 | 91 | 1.70e-19 | 85.1 |
| MS.gene005765.t1 | MTR_8g023840 | 47.000 | 100 | 46 | 3 | 2 | 99 | 61 | 155 | 5.16e-19 | 89.4 |
| MS.gene005765.t1 | MTR_8g023860 | 45.098 | 102 | 49 | 4 | 1 | 100 | 61 | 157 | 1.05e-18 | 88.6 |
| MS.gene005765.t1 | MTR_2g068920 | 39.130 | 115 | 54 | 2 | 10 | 108 | 77 | 191 | 1.22e-18 | 86.7 |
| MS.gene005765.t1 | MTR_3g096920 | 48.750 | 80 | 38 | 2 | 10 | 87 | 62 | 140 | 1.45e-18 | 87.0 |
| MS.gene005765.t1 | MTR_8g023900 | 43.689 | 103 | 51 | 4 | 2 | 102 | 243 | 340 | 1.58e-18 | 88.6 |
| MS.gene005765.t1 | MTR_8g023900 | 35.443 | 158 | 86 | 7 | 2 | 154 | 62 | 208 | 4.88e-16 | 80.9 |
| MS.gene005765.t1 | MTR_3g098810 | 40.909 | 110 | 54 | 3 | 12 | 110 | 69 | 178 | 1.67e-18 | 85.1 |
| MS.gene005765.t1 | MTR_8g099750 | 37.615 | 109 | 60 | 2 | 10 | 110 | 67 | 175 | 1.77e-18 | 84.7 |
| MS.gene005765.t1 | MTR_5g090970 | 41.071 | 112 | 53 | 4 | 10 | 108 | 72 | 183 | 5.46e-18 | 85.1 |
| MS.gene005765.t1 | MTR_5g090970 | 41.071 | 112 | 53 | 4 | 10 | 108 | 73 | 184 | 5.86e-18 | 85.1 |
| MS.gene005765.t1 | MTR_8g023930 | 40.566 | 106 | 52 | 4 | 2 | 103 | 74 | 172 | 1.30e-16 | 82.8 |
| MS.gene005765.t1 | MTR_3g098810 | 42.857 | 77 | 36 | 2 | 12 | 82 | 69 | 143 | 3.84e-15 | 73.9 |
| MS.gene005765.t1 | MTR_2g086690 | 32.673 | 101 | 63 | 2 | 10 | 105 | 65 | 165 | 9.64e-15 | 74.3 |
| MS.gene005765.t1 | MTR_4g052620 | 35.644 | 101 | 60 | 2 | 10 | 105 | 65 | 165 | 1.00e-14 | 74.7 |
| MS.gene005765.t1 | MTR_8g023880 | 38.136 | 118 | 48 | 5 | 1 | 102 | 56 | 164 | 1.34e-14 | 74.3 |
| MS.gene005765.t1 | MTR_7g105170 | 36.190 | 105 | 59 | 4 | 7 | 103 | 61 | 165 | 2.37e-14 | 73.6 |
| MS.gene005765.t1 | MTR_4g094302 | 33.333 | 114 | 53 | 5 | 3 | 102 | 55 | 159 | 1.70e-12 | 66.6 |
| MS.gene005765.t1 | MTR_7g070150 | 39.241 | 79 | 46 | 1 | 50 | 128 | 7 | 83 | 5.91e-12 | 62.4 |
| MS.gene005765.t1 | MTR_4g094302 | 38.824 | 85 | 36 | 4 | 3 | 80 | 55 | 130 | 2.93e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005765.t1 | AT3G10500 | 36.553 | 528 | 224 | 17 | 2 | 494 | 58 | 509 | 5.38e-72 | 239 |
| MS.gene005765.t1 | AT5G04410 | 75.397 | 126 | 30 | 1 | 2 | 126 | 58 | 183 | 6.53e-62 | 212 |
| MS.gene005765.t1 | AT5G04410 | 29.528 | 254 | 146 | 10 | 249 | 496 | 299 | 525 | 3.79e-14 | 75.5 |
| MS.gene005765.t1 | AT3G10490 | 59.310 | 145 | 53 | 4 | 1 | 143 | 75 | 215 | 7.60e-51 | 174 |
| MS.gene005765.t1 | AT3G10480 | 61.029 | 136 | 49 | 3 | 2 | 136 | 76 | 208 | 2.17e-49 | 176 |
| MS.gene005765.t1 | AT3G10490 | 59.722 | 144 | 52 | 4 | 2 | 143 | 76 | 215 | 2.70e-49 | 176 |
| MS.gene005765.t1 | AT3G10480 | 60.584 | 137 | 49 | 3 | 2 | 136 | 76 | 209 | 3.95e-49 | 175 |
| MS.gene005765.t1 | AT3G10480 | 60.584 | 137 | 49 | 3 | 2 | 136 | 109 | 242 | 2.14e-48 | 175 |
| MS.gene005765.t1 | AT5G09330 | 47.561 | 164 | 78 | 4 | 1 | 163 | 54 | 210 | 2.14e-43 | 160 |
| MS.gene005765.t1 | AT5G09330 | 47.561 | 164 | 78 | 4 | 1 | 163 | 54 | 210 | 2.14e-43 | 160 |
| MS.gene005765.t1 | AT5G09330 | 47.561 | 164 | 78 | 4 | 1 | 163 | 54 | 210 | 2.14e-43 | 160 |
| MS.gene005765.t1 | AT5G09330 | 47.561 | 164 | 78 | 4 | 1 | 163 | 54 | 210 | 2.14e-43 | 160 |
| MS.gene005765.t1 | AT5G09330 | 47.561 | 164 | 78 | 4 | 1 | 163 | 54 | 210 | 2.14e-43 | 160 |
| MS.gene005765.t1 | AT1G34190 | 47.368 | 171 | 66 | 3 | 2 | 171 | 65 | 212 | 8.40e-42 | 157 |
| MS.gene005765.t1 | AT1G34180 | 54.472 | 123 | 55 | 1 | 1 | 122 | 64 | 186 | 1.78e-41 | 154 |
| MS.gene005765.t1 | AT1G34180 | 54.472 | 123 | 55 | 1 | 1 | 122 | 76 | 198 | 2.01e-41 | 154 |
| MS.gene005765.t1 | AT1G32870 | 60.684 | 117 | 41 | 2 | 5 | 118 | 62 | 176 | 3.40e-41 | 155 |
| MS.gene005765.t1 | AT1G32870 | 60.684 | 117 | 41 | 2 | 5 | 118 | 62 | 176 | 3.81e-41 | 155 |
| MS.gene005765.t1 | AT1G32870 | 60.684 | 117 | 41 | 2 | 5 | 118 | 98 | 212 | 6.30e-41 | 155 |
| MS.gene005765.t1 | AT1G34180 | 54.472 | 123 | 55 | 1 | 1 | 122 | 64 | 186 | 1.01e-40 | 154 |
| MS.gene005765.t1 | AT1G34180 | 54.472 | 123 | 55 | 1 | 1 | 122 | 76 | 198 | 1.18e-40 | 154 |
| MS.gene005765.t1 | AT5G64060 | 51.562 | 128 | 61 | 1 | 2 | 128 | 55 | 182 | 2.46e-40 | 149 |
| MS.gene005765.t1 | AT1G65910 | 55.752 | 113 | 49 | 1 | 2 | 113 | 55 | 167 | 1.23e-35 | 140 |
| MS.gene005765.t1 | AT3G10490 | 56.780 | 118 | 45 | 4 | 28 | 143 | 2 | 115 | 1.39e-34 | 133 |
| MS.gene005765.t1 | AT3G10490 | 56.780 | 118 | 45 | 4 | 28 | 143 | 2 | 115 | 1.39e-34 | 133 |
| MS.gene005765.t1 | AT3G17730 | 56.731 | 104 | 44 | 1 | 2 | 104 | 55 | 158 | 4.53e-34 | 129 |
| MS.gene005765.t1 | AT1G33060 | 57.282 | 103 | 43 | 1 | 1 | 102 | 72 | 174 | 1.22e-32 | 132 |
| MS.gene005765.t1 | AT1G33060 | 57.282 | 103 | 43 | 1 | 1 | 102 | 72 | 174 | 1.25e-32 | 132 |
| MS.gene005765.t1 | AT3G03200 | 58.654 | 104 | 39 | 2 | 2 | 102 | 55 | 157 | 2.33e-32 | 129 |
| MS.gene005765.t1 | AT5G61430 | 51.402 | 107 | 49 | 1 | 5 | 108 | 3 | 109 | 1.13e-31 | 123 |
| MS.gene005765.t1 | AT2G24430 | 51.852 | 108 | 50 | 1 | 3 | 108 | 64 | 171 | 1.95e-31 | 124 |
| MS.gene005765.t1 | AT2G24430 | 51.852 | 108 | 50 | 1 | 3 | 108 | 64 | 171 | 1.95e-31 | 124 |
| MS.gene005765.t1 | AT4G35580 | 56.311 | 103 | 44 | 1 | 1 | 102 | 57 | 159 | 2.06e-31 | 127 |
| MS.gene005765.t1 | AT3G18400 | 51.402 | 107 | 52 | 0 | 2 | 108 | 52 | 158 | 2.06e-31 | 124 |
| MS.gene005765.t1 | AT5G17260 | 55.769 | 104 | 42 | 2 | 2 | 102 | 55 | 157 | 2.10e-31 | 127 |
| MS.gene005765.t1 | AT4G35580 | 56.311 | 103 | 44 | 1 | 1 | 102 | 57 | 159 | 2.21e-31 | 127 |
| MS.gene005765.t1 | AT4G35580 | 56.311 | 103 | 44 | 1 | 1 | 102 | 57 | 159 | 2.34e-31 | 127 |
| MS.gene005765.t1 | AT5G61430 | 51.402 | 107 | 49 | 1 | 5 | 108 | 66 | 172 | 3.64e-31 | 123 |
| MS.gene005765.t1 | AT5G46590 | 53.846 | 104 | 45 | 2 | 2 | 102 | 55 | 158 | 5.17e-31 | 122 |
| MS.gene005765.t1 | AT5G07680 | 50.459 | 109 | 51 | 1 | 3 | 108 | 51 | 159 | 9.52e-31 | 122 |
| MS.gene005765.t1 | AT5G07680 | 50.459 | 109 | 51 | 1 | 3 | 108 | 65 | 173 | 1.12e-30 | 122 |
| MS.gene005765.t1 | AT5G39610 | 51.376 | 109 | 50 | 1 | 3 | 108 | 68 | 176 | 4.21e-30 | 119 |
| MS.gene005765.t1 | AT1G54330 | 53.704 | 108 | 48 | 1 | 2 | 109 | 55 | 160 | 8.60e-30 | 119 |
| MS.gene005765.t1 | AT4G17980 | 52.830 | 106 | 45 | 2 | 2 | 102 | 55 | 160 | 2.29e-29 | 116 |
| MS.gene005765.t1 | AT4G17980 | 52.830 | 106 | 45 | 2 | 2 | 102 | 55 | 160 | 3.21e-29 | 117 |
| MS.gene005765.t1 | AT3G12977 | 49.495 | 99 | 48 | 1 | 10 | 106 | 20 | 118 | 4.17e-29 | 115 |
| MS.gene005765.t1 | AT4G10350 | 51.064 | 94 | 45 | 1 | 10 | 102 | 20 | 113 | 1.16e-28 | 115 |
| MS.gene005765.t1 | AT3G49530 | 50.000 | 104 | 50 | 2 | 1 | 102 | 61 | 164 | 1.34e-28 | 117 |
| MS.gene005765.t1 | AT3G12977 | 49.495 | 99 | 48 | 1 | 10 | 106 | 73 | 171 | 1.58e-28 | 114 |
| MS.gene005765.t1 | AT3G15170 | 51.402 | 107 | 47 | 2 | 3 | 104 | 68 | 174 | 2.97e-28 | 114 |
| MS.gene005765.t1 | AT4G10350 | 51.064 | 94 | 45 | 1 | 10 | 102 | 67 | 160 | 3.04e-28 | 115 |
| MS.gene005765.t1 | AT1G33280 | 50.538 | 93 | 44 | 1 | 10 | 102 | 66 | 156 | 3.06e-28 | 114 |
| MS.gene005765.t1 | AT3G49530 | 50.000 | 104 | 50 | 2 | 1 | 102 | 61 | 164 | 3.22e-28 | 117 |
| MS.gene005765.t1 | AT1G76420 | 48.113 | 106 | 51 | 2 | 1 | 104 | 70 | 173 | 5.80e-28 | 114 |
| MS.gene005765.t1 | AT5G24590 | 51.429 | 105 | 47 | 3 | 1 | 102 | 61 | 164 | 9.17e-28 | 116 |
| MS.gene005765.t1 | AT5G46590 | 56.818 | 88 | 37 | 1 | 2 | 88 | 55 | 142 | 9.26e-28 | 112 |
| MS.gene005765.t1 | AT1G71930 | 50.538 | 93 | 45 | 1 | 10 | 102 | 67 | 158 | 1.23e-27 | 113 |
| MS.gene005765.t1 | AT1G71930 | 50.538 | 93 | 45 | 1 | 10 | 102 | 67 | 158 | 1.23e-27 | 113 |
| MS.gene005765.t1 | AT5G18270 | 51.887 | 106 | 45 | 3 | 2 | 102 | 68 | 172 | 3.10e-27 | 112 |
| MS.gene005765.t1 | AT3G29035 | 48.739 | 119 | 54 | 3 | 3 | 116 | 72 | 188 | 3.15e-27 | 112 |
| MS.gene005765.t1 | AT2G18060 | 45.133 | 113 | 60 | 2 | 10 | 121 | 67 | 178 | 4.01e-27 | 112 |
| MS.gene005765.t1 | AT2G18060 | 45.133 | 113 | 60 | 2 | 10 | 121 | 67 | 178 | 4.01e-27 | 112 |
| MS.gene005765.t1 | AT3G44290 | 52.174 | 92 | 38 | 1 | 8 | 99 | 68 | 153 | 5.70e-27 | 108 |
| MS.gene005765.t1 | AT1G56010 | 43.860 | 114 | 60 | 1 | 10 | 119 | 8 | 121 | 5.94e-27 | 109 |
| MS.gene005765.t1 | AT5G53950 | 49.057 | 106 | 49 | 2 | 3 | 103 | 65 | 170 | 1.26e-26 | 111 |
| MS.gene005765.t1 | AT1G69490 | 45.455 | 110 | 55 | 1 | 10 | 114 | 64 | 173 | 1.32e-26 | 109 |
| MS.gene005765.t1 | AT1G56010 | 43.860 | 114 | 60 | 1 | 10 | 119 | 75 | 188 | 1.64e-26 | 110 |
| MS.gene005765.t1 | AT1G62700 | 47.273 | 110 | 53 | 3 | 10 | 116 | 65 | 172 | 1.98e-26 | 111 |
| MS.gene005765.t1 | AT1G62700 | 47.273 | 110 | 53 | 3 | 10 | 116 | 65 | 172 | 1.98e-26 | 111 |
| MS.gene005765.t1 | AT5G18270 | 50.476 | 105 | 46 | 3 | 3 | 102 | 69 | 172 | 2.18e-26 | 110 |
| MS.gene005765.t1 | AT5G62380 | 53.191 | 94 | 41 | 2 | 10 | 102 | 65 | 156 | 2.31e-26 | 110 |
| MS.gene005765.t1 | AT5G62380 | 53.191 | 94 | 41 | 2 | 10 | 102 | 65 | 156 | 2.31e-26 | 110 |
| MS.gene005765.t1 | AT2G46770 | 44.860 | 107 | 45 | 1 | 10 | 102 | 74 | 180 | 2.92e-26 | 110 |
| MS.gene005765.t1 | AT1G52890 | 47.000 | 100 | 52 | 1 | 10 | 108 | 69 | 168 | 3.21e-26 | 109 |
| MS.gene005765.t1 | AT3G44290 | 52.174 | 92 | 38 | 1 | 8 | 99 | 68 | 153 | 4.21e-26 | 109 |
| MS.gene005765.t1 | AT3G15500 | 47.000 | 100 | 52 | 1 | 10 | 108 | 69 | 168 | 5.21e-26 | 108 |
| MS.gene005765.t1 | AT1G79580 | 50.526 | 95 | 42 | 3 | 10 | 102 | 75 | 166 | 6.07e-26 | 109 |
| MS.gene005765.t1 | AT1G79580 | 50.526 | 95 | 42 | 3 | 10 | 102 | 75 | 166 | 6.07e-26 | 109 |
| MS.gene005765.t1 | AT1G79580 | 50.526 | 95 | 42 | 3 | 10 | 102 | 75 | 166 | 6.07e-26 | 109 |
| MS.gene005765.t1 | AT1G79580 | 50.526 | 95 | 42 | 3 | 10 | 102 | 75 | 166 | 6.07e-26 | 109 |
| MS.gene005765.t1 | AT1G79580 | 50.526 | 95 | 42 | 3 | 10 | 102 | 75 | 166 | 6.07e-26 | 109 |
| MS.gene005765.t1 | AT5G13180 | 48.039 | 102 | 51 | 1 | 10 | 109 | 66 | 167 | 8.43e-26 | 106 |
| MS.gene005765.t1 | AT5G66300 | 37.956 | 137 | 80 | 1 | 10 | 146 | 70 | 201 | 8.51e-26 | 107 |
| MS.gene005765.t1 | AT1G32510 | 42.857 | 119 | 59 | 2 | 2 | 111 | 55 | 173 | 9.38e-26 | 107 |
| MS.gene005765.t1 | AT3G61910 | 42.593 | 108 | 48 | 1 | 10 | 103 | 69 | 176 | 1.08e-25 | 108 |
| MS.gene005765.t1 | AT5G22290 | 48.913 | 92 | 42 | 1 | 8 | 99 | 75 | 161 | 1.14e-25 | 108 |
| MS.gene005765.t1 | AT2G27300 | 47.959 | 98 | 44 | 2 | 2 | 99 | 63 | 153 | 2.11e-25 | 107 |
| MS.gene005765.t1 | AT1G01720 | 42.537 | 134 | 66 | 5 | 10 | 134 | 62 | 193 | 2.28e-25 | 106 |
| MS.gene005765.t1 | AT3G04060 | 50.962 | 104 | 45 | 3 | 5 | 103 | 70 | 172 | 2.42e-25 | 107 |
| MS.gene005765.t1 | AT4G36160 | 42.982 | 114 | 62 | 2 | 10 | 121 | 68 | 180 | 2.80e-25 | 107 |
| MS.gene005765.t1 | AT4G36160 | 42.982 | 114 | 62 | 2 | 10 | 121 | 68 | 180 | 2.80e-25 | 107 |
| MS.gene005765.t1 | AT1G12260 | 40.602 | 133 | 66 | 3 | 10 | 131 | 65 | 195 | 3.28e-25 | 107 |
| MS.gene005765.t1 | AT4G36160 | 42.982 | 114 | 62 | 2 | 10 | 121 | 72 | 184 | 3.31e-25 | 107 |
| MS.gene005765.t1 | AT4G27410 | 48.980 | 98 | 48 | 2 | 10 | 105 | 69 | 166 | 3.54e-25 | 105 |
| MS.gene005765.t1 | AT1G12260 | 51.064 | 94 | 43 | 2 | 10 | 102 | 65 | 156 | 4.33e-25 | 106 |
| MS.gene005765.t1 | AT4G27410 | 47.368 | 95 | 49 | 1 | 10 | 103 | 86 | 180 | 5.95e-25 | 105 |
| MS.gene005765.t1 | AT3G04070 | 29.658 | 263 | 152 | 8 | 10 | 249 | 65 | 317 | 8.53e-25 | 105 |
| MS.gene005765.t1 | AT1G32770 | 43.269 | 104 | 48 | 1 | 10 | 102 | 74 | 177 | 1.13e-24 | 105 |
| MS.gene005765.t1 | AT2G33480 | 48.454 | 97 | 49 | 1 | 10 | 105 | 10 | 106 | 6.89e-24 | 100 |
| MS.gene005765.t1 | AT1G77450 | 47.475 | 99 | 47 | 3 | 10 | 104 | 65 | 162 | 9.18e-24 | 100 |
| MS.gene005765.t1 | AT2G33480 | 48.454 | 97 | 49 | 1 | 10 | 105 | 67 | 163 | 1.41e-23 | 100 |
| MS.gene005765.t1 | AT5G08790 | 47.059 | 102 | 47 | 4 | 10 | 105 | 62 | 162 | 1.48e-23 | 100 |
| MS.gene005765.t1 | AT5G63790 | 46.667 | 105 | 49 | 3 | 10 | 108 | 115 | 218 | 3.57e-23 | 100 |
| MS.gene005765.t1 | AT5G63790 | 46.667 | 105 | 49 | 3 | 10 | 108 | 105 | 208 | 3.57e-23 | 100 |
| MS.gene005765.t1 | AT2G33480 | 47.525 | 101 | 42 | 2 | 10 | 105 | 67 | 161 | 3.61e-23 | 99.4 |
| MS.gene005765.t1 | AT2G43000 | 44.898 | 98 | 52 | 1 | 10 | 105 | 73 | 170 | 6.82e-23 | 99.0 |
| MS.gene005765.t1 | AT4G28530 | 47.368 | 95 | 45 | 2 | 10 | 102 | 81 | 172 | 7.45e-23 | 100 |
| MS.gene005765.t1 | AT3G04070 | 28.674 | 279 | 150 | 9 | 10 | 249 | 65 | 333 | 1.34e-22 | 99.8 |
| MS.gene005765.t1 | AT2G17040 | 43.519 | 108 | 52 | 3 | 1 | 105 | 54 | 155 | 2.86e-22 | 97.1 |
| MS.gene005765.t1 | AT1G61110 | 41.525 | 118 | 55 | 2 | 2 | 105 | 63 | 180 | 5.48e-22 | 97.1 |
| MS.gene005765.t1 | AT3G15510 | 43.925 | 107 | 46 | 3 | 10 | 102 | 72 | 178 | 3.12e-21 | 95.9 |
| MS.gene005765.t1 | AT2G02450 | 45.361 | 97 | 49 | 3 | 10 | 104 | 106 | 200 | 8.17e-21 | 94.7 |
| MS.gene005765.t1 | AT2G02450 | 45.361 | 97 | 49 | 3 | 10 | 104 | 106 | 200 | 1.00e-20 | 94.7 |
| MS.gene005765.t1 | AT5G04395 | 52.500 | 80 | 35 | 1 | 4 | 80 | 90 | 169 | 1.32e-20 | 90.1 |
| MS.gene005765.t1 | AT1G26870 | 38.393 | 112 | 57 | 2 | 6 | 105 | 67 | 178 | 4.29e-20 | 93.2 |
| MS.gene005765.t1 | AT4G01520 | 39.216 | 102 | 55 | 2 | 1 | 99 | 54 | 151 | 4.45e-20 | 91.3 |
| MS.gene005765.t1 | AT4G01540 | 40.196 | 102 | 54 | 2 | 1 | 99 | 54 | 151 | 7.97e-20 | 92.0 |
| MS.gene005765.t1 | AT4G01540 | 40.196 | 102 | 54 | 2 | 1 | 99 | 54 | 151 | 8.30e-20 | 91.7 |
| MS.gene005765.t1 | AT4G01540 | 40.196 | 102 | 54 | 2 | 1 | 99 | 54 | 151 | 1.17e-19 | 91.7 |
| MS.gene005765.t1 | AT4G01540 | 40.196 | 102 | 54 | 2 | 1 | 99 | 54 | 151 | 1.40e-19 | 92.0 |
| MS.gene005765.t1 | AT2G43000 | 43.820 | 89 | 48 | 1 | 19 | 105 | 4 | 92 | 1.81e-19 | 87.0 |
| MS.gene005765.t1 | AT5G22290 | 50.000 | 66 | 28 | 1 | 34 | 99 | 2 | 62 | 2.00e-18 | 85.1 |
| MS.gene005765.t1 | AT5G39820 | 35.833 | 120 | 53 | 2 | 10 | 105 | 75 | 194 | 2.36e-18 | 86.7 |
| MS.gene005765.t1 | AT3G12910 | 34.677 | 124 | 65 | 3 | 1 | 108 | 68 | 191 | 8.72e-18 | 84.3 |
| MS.gene005765.t1 | AT2G18060 | 40.449 | 89 | 51 | 2 | 34 | 121 | 3 | 90 | 1.07e-17 | 84.0 |
| MS.gene005765.t1 | AT1G52880 | 43.119 | 109 | 49 | 3 | 10 | 105 | 72 | 180 | 6.25e-17 | 82.4 |
| MS.gene005765.t1 | AT4G01550 | 38.843 | 121 | 65 | 3 | 1 | 116 | 53 | 169 | 1.36e-16 | 82.8 |
| MS.gene005765.t1 | AT3G04420 | 33.663 | 101 | 63 | 1 | 2 | 102 | 54 | 150 | 1.64e-15 | 77.4 |
| MS.gene005765.t1 | AT3G04420 | 34.653 | 101 | 62 | 1 | 2 | 102 | 54 | 150 | 5.84e-15 | 76.6 |
| MS.gene005765.t1 | AT5G22380 | 33.000 | 100 | 63 | 2 | 10 | 105 | 66 | 165 | 1.49e-14 | 73.6 |
| MS.gene005765.t1 | AT3G44350 | 33.663 | 101 | 60 | 3 | 10 | 105 | 65 | 163 | 1.08e-13 | 71.2 |
| MS.gene005765.t1 | AT1G02250 | 31.088 | 193 | 96 | 9 | 2 | 175 | 54 | 228 | 1.34e-12 | 69.7 |
| MS.gene005765.t1 | AT3G10500 | 37.815 | 119 | 54 | 4 | 384 | 494 | 269 | 375 | 4.35e-12 | 68.6 |
| MS.gene005765.t1 | AT1G02220 | 29.907 | 107 | 68 | 2 | 2 | 108 | 54 | 153 | 7.64e-12 | 67.4 |
| MS.gene005765.t1 | AT1G01010 | 36.111 | 108 | 51 | 4 | 2 | 99 | 54 | 153 | 3.96e-11 | 65.5 |
| MS.gene005765.t1 | AT3G44350 | 35.135 | 74 | 47 | 1 | 10 | 82 | 65 | 138 | 7.23e-11 | 61.2 |
| MS.gene005765.t1 | AT1G02230 | 37.500 | 80 | 44 | 2 | 2 | 78 | 54 | 130 | 8.11e-11 | 64.3 |
Find 150 sgRNAs with CRISPR-Local
Find 199 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTACTTTGGTGCCTATTTC+TGG | 0.060133 | 1.2:+68009589 | MS.gene005765:CDS |
| AGGATCTAGCAGCGCCAAAT+TGG | 0.239815 | 1.2:+68009160 | MS.gene005765:CDS |
| AGAATCCAAGCATATATATT+TGG | 0.264088 | 1.2:-68008907 | None:intergenic |
| AGCACTTCCAACTGTGTTAC+TGG | 0.265170 | 1.2:-68008478 | None:intergenic |
| CCGTACTTCTCCCCATTCTT+AGG | 0.288710 | 1.2:-68007776 | None:intergenic |
| GTCAAATCAGTAAGATAATC+AGG | 0.296588 | 1.2:-68008759 | None:intergenic |
| AATGAACCTTTGAAACTAGA+AGG | 0.304326 | 1.2:+68007866 | MS.gene005765:CDS |
| GAGGAGGAATGGGAGAATTT+TGG | 0.305278 | 1.2:+68007812 | MS.gene005765:CDS |
| CTTCAATCCAACTTCTGTTA+TGG | 0.317313 | 1.2:+68008504 | MS.gene005765:CDS |
| CTACAGACCAAGCCAGAAAT+AGG | 0.332472 | 1.2:-68009601 | None:intergenic |
| ATCACGATTCTTAATATCAT+TGG | 0.337803 | 1.2:-68008799 | None:intergenic |
| CTGTAACCTGAGACCCAATT+TGG | 0.341180 | 1.2:-68009174 | None:intergenic |
| ATCTTCGAGAAGAGTGGTTC+GGG | 0.351910 | 1.2:+68007752 | MS.gene005765:CDS |
| TTTGGTGCCTATTTCTGGCT+TGG | 0.358034 | 1.2:+68009594 | MS.gene005765:CDS |
| GAAGCTGAAGACAAGGGATT+TGG | 0.364928 | 1.2:+68007285 | MS.gene005765:CDS |
| CTCCCTTTGTTGAGGAGGAA+TGG | 0.367626 | 1.2:+68007801 | MS.gene005765:CDS |
| TGCAGTTATATGAGCTGAAT+TGG | 0.369810 | 1.2:-68009446 | None:intergenic |
| GGCTGTCCATAGCTGGGAAT+GGG | 0.371810 | 1.2:-68008954 | None:intergenic |
| TAGCAGAGTTAACATCAGTT+TGG | 0.372184 | 1.2:-68009570 | None:intergenic |
| AGCAGAGTTAACATCAGTTT+GGG | 0.377160 | 1.2:-68009569 | None:intergenic |
| TTTAACACCGTTATGTCTAC+TGG | 0.378066 | 1.2:+68009541 | MS.gene005765:CDS |
| TACGTTCATTAATAAATGCT+TGG | 0.378930 | 1.2:-68008554 | None:intergenic |
| AATAATATATCTGATCTATA+TGG | 0.379133 | 1.2:+68008627 | MS.gene005765:CDS |
| TATAGATCAGATATATTATT+AGG | 0.379942 | 1.2:-68008624 | None:intergenic |
| TTCAAAGGTTCATTATCAAC+AGG | 0.383389 | 1.2:-68007857 | None:intergenic |
| CTGCTAAGGAGTTGGCTTGT+GGG | 0.383688 | 1.2:+68009401 | MS.gene005765:CDS |
| TGATGTTAACTCTGCTACTT+TGG | 0.392276 | 1.2:+68009576 | MS.gene005765:CDS |
| CTAAGAATGGGGAGAAGTAC+GGG | 0.400942 | 1.2:+68007777 | MS.gene005765:CDS |
| AGAAGTATGGTAATAGTATC+AGG | 0.407886 | 1.2:+68007335 | MS.gene005765:CDS |
| ACGTTCATTAATAAATGCTT+GGG | 0.412592 | 1.2:-68008553 | None:intergenic |
| AATGATAGGCTGTCCATAGC+TGG | 0.420213 | 1.2:-68008961 | None:intergenic |
| GTGGTTCGGGGCCTAAGAAT+GGG | 0.426791 | 1.2:+68007765 | MS.gene005765:CDS |
| TATTAATGAACGTAAGCAAT+TGG | 0.427450 | 1.2:+68008563 | MS.gene005765:CDS |
| ACGAATCGTGCTACCGATAG+AGG | 0.429431 | 1.2:+68007358 | MS.gene005765:CDS |
| GGCGCTGCTAGATCCTCCTT+TGG | 0.437971 | 1.2:-68009153 | None:intergenic |
| TAATACCTGCACTCCAGCTT+TGG | 0.440305 | 1.2:-68007536 | None:intergenic |
| CGCGAACCTGATCGAGGTCA+TGG | 0.440556 | 1.2:-68008033 | None:intergenic |
| TCCCTTTGTTGAGGAGGAAT+GGG | 0.443540 | 1.2:+68007802 | MS.gene005765:CDS |
| AGTGGTTCGGGGCCTAAGAA+TGG | 0.444141 | 1.2:+68007764 | MS.gene005765:CDS |
| ACTGCGTTGGACAAGAAGTA+TGG | 0.444700 | 1.2:+68007322 | MS.gene005765:CDS |
| GTGCTACCGATAGAGGTTAC+TGG | 0.447263 | 1.2:+68007365 | MS.gene005765:CDS |
| TGATGTACTGGTGGATCCCT+TGG | 0.449135 | 1.2:+68007943 | MS.gene005765:CDS |
| CCTAAGAATGGGGAGAAGTA+CGG | 0.449248 | 1.2:+68007776 | MS.gene005765:CDS |
| AAGTCCTCGTAAGTAGAATC+AGG | 0.450580 | 1.2:-68008001 | None:intergenic |
| TGATTTGACTGATGAGTACT+TGG | 0.451759 | 1.2:+68008773 | MS.gene005765:CDS |
| TTCTGTACCTGATGATGTAC+TGG | 0.454452 | 1.2:+68007931 | MS.gene005765:CDS |
| CCTGCTAAGGAGTTGGCTTG+TGG | 0.455079 | 1.2:+68009400 | MS.gene005765:CDS |
| CTTTCACTCCTTGCATTCAA+AGG | 0.455582 | 1.2:-68008930 | None:intergenic |
| CGTTTCCAAATATATATGCT+TGG | 0.455889 | 1.2:+68008902 | MS.gene005765:CDS |
| CACATGGTGATCGAAGCAAT+TGG | 0.460401 | 1.2:+68007476 | MS.gene005765:CDS |
| CACTTGTTTATCACTTGGGT+CGG | 0.461744 | 1.2:+68007449 | MS.gene005765:CDS |
| ATGGTACTTCTTCACTGCGT+TGG | 0.462664 | 1.2:+68007309 | MS.gene005765:CDS |
| GCAGCGCCAAATTGGGTCTC+AGG | 0.465580 | 1.2:+68009168 | MS.gene005765:CDS |
| GGATCTAGCAGCGCCAAATT+GGG | 0.473993 | 1.2:+68009161 | MS.gene005765:CDS |
| TGCATCAGAGTTTCCTGCTA+AGG | 0.474003 | 1.2:+68009387 | MS.gene005765:CDS |
| GTAAACCCTTCTAGTTTCAA+AGG | 0.474396 | 1.2:-68007872 | None:intergenic |
| TATGTTGGCCAACAACCTAT+TGG | 0.476399 | 1.2:-68009347 | None:intergenic |
| GATCTTCGAGAAGAGTGGTT+CGG | 0.480423 | 1.2:+68007751 | MS.gene005765:CDS |
| ACACTCTCCATAACAGAAGT+TGG | 0.481256 | 1.2:-68008511 | None:intergenic |
| ACCATAACCTGCTCAATGAT+AGG | 0.481307 | 1.2:-68008975 | None:intergenic |
| GATGCAAATGCAGGTGGAGC+AGG | 0.481874 | 1.2:-68009370 | None:intergenic |
| AATGCAAAATTGAAATTCAA+AGG | 0.482433 | 1.2:-68008708 | None:intergenic |
| TTAGAGGCAATGCGATGGAT+TGG | 0.483997 | 1.2:+68009497 | MS.gene005765:CDS |
| TGAAACCCATGACCTCGATC+AGG | 0.485558 | 1.2:+68008027 | MS.gene005765:CDS |
| TGGATTCTCCTTTGAATGCA+AGG | 0.486310 | 1.2:+68008922 | MS.gene005765:CDS |
| AGGCTGTCCATAGCTGGGAA+TGG | 0.491587 | 1.2:-68008955 | None:intergenic |
| TCCCATTCCTCCTCAACAAA+GGG | 0.491594 | 1.2:-68007803 | None:intergenic |
| GAATTGGATGACTCAGCTGC+AGG | 0.500175 | 1.2:-68009430 | None:intergenic |
| CCACAAGCCAACTCCTTAGC+AGG | 0.500568 | 1.2:-68009400 | None:intergenic |
| ACATGGTGATCGAAGCAATT+GGG | 0.507365 | 1.2:+68007477 | MS.gene005765:CDS |
| GATGAGACTTTAGCCAAAGC+TGG | 0.508004 | 1.2:+68007523 | MS.gene005765:CDS |
| TTCACGAGTTCATCAACATC+AGG | 0.509294 | 1.2:-68007896 | None:intergenic |
| AGAGTTTCCTGCTAAGGAGT+TGG | 0.513288 | 1.2:+68009393 | MS.gene005765:CDS |
| GAAGACACTTGTTTATCACT+TGG | 0.516829 | 1.2:+68007444 | MS.gene005765:CDS |
| ATTGGGTCATGCATGAGTAT+AGG | 0.516923 | 1.2:+68007494 | MS.gene005765:CDS |
| ATGCTTGGGAATACTGAGGA+TGG | 0.519813 | 1.2:-68008539 | None:intergenic |
| AAGCAATTGGAAGCCACTCT+TGG | 0.521943 | 1.2:+68008576 | MS.gene005765:CDS |
| AATTCAGCTCATATAACTGC+AGG | 0.522347 | 1.2:+68009448 | MS.gene005765:CDS |
| TTTAGCCAAAGCTGGAGTGC+AGG | 0.526882 | 1.2:+68007531 | MS.gene005765:CDS |
| GATTGGATGGTGGACAAGAA+TGG | 0.532762 | 1.2:+68009514 | MS.gene005765:CDS |
| GGATCCACCAGTACATCATC+AGG | 0.534443 | 1.2:-68007938 | None:intergenic |
| TTAACACCGTTATGTCTACT+GGG | 0.535683 | 1.2:+68009542 | MS.gene005765:CDS |
| GTTTGTCAAGGAACTACCAT+AGG | 0.538784 | 1.2:-68009091 | None:intergenic |
| GAAAGCCCCATTCCCAGCTA+TGG | 0.541885 | 1.2:+68008948 | MS.gene005765:CDS |
| AAGACACTTGTTTATCACTT+GGG | 0.542978 | 1.2:+68007445 | MS.gene005765:CDS |
| ACTTGTTTATCACTTGGGTC+GGG | 0.543479 | 1.2:+68007450 | MS.gene005765:CDS |
| CTCCCATTCCTCCTCAACAA+AGG | 0.545530 | 1.2:-68007804 | None:intergenic |
| CACTTGGGTCGGGCTCCACA+TGG | 0.545932 | 1.2:+68007460 | MS.gene005765:CDS |
| ATGAACCTTTGAAACTAGAA+GGG | 0.554073 | 1.2:+68007867 | MS.gene005765:CDS |
| CGGGGCTCCCTTTGTTGAGG+AGG | 0.555447 | 1.2:+68007796 | MS.gene005765:CDS |
| GAAGCATGCCAATAGGTTGT+TGG | 0.558530 | 1.2:+68009339 | MS.gene005765:CDS |
| TGGACAGCCTATCATTGAGC+AGG | 0.558645 | 1.2:+68008968 | MS.gene005765:CDS |
| TCATGAAGATTTACCAAAGG+AGG | 0.560098 | 1.2:+68009140 | MS.gene005765:CDS |
| AGAGGTTACTGGAAGACTAC+TGG | 0.560217 | 1.2:+68007376 | MS.gene005765:CDS |
| AATATCAATTCAGTGCAAGA+TGG | 0.561413 | 1.2:+68008654 | MS.gene005765:CDS |
| AAGGATCGTGCTATCAAGAA+TGG | 0.564256 | 1.2:+68007400 | MS.gene005765:CDS |
| AGTCTTCCAGTAACCTCTAT+CGG | 0.564257 | 1.2:-68007371 | None:intergenic |
| TCAAATCAGTAAGATAATCA+GGG | 0.565317 | 1.2:-68008758 | None:intergenic |
| AATATATCTGATCTATATGG+TGG | 0.571230 | 1.2:+68008630 | MS.gene005765:CDS |
| AAGAATGGAGAGGAGACTGT+TGG | 0.572368 | 1.2:+68007415 | MS.gene005765:CDS |
| TGTACCTGATGATGTACTGG+TGG | 0.572636 | 1.2:+68007934 | MS.gene005765:CDS |
| TGCAGGTGGAGCAGGTATGT+TGG | 0.572952 | 1.2:-68009362 | None:intergenic |
| CGTCGTCGTCAGGGCATGCA+AGG | 0.575963 | 1.2:-68008875 | None:intergenic |
| GGAAACTCTGATGCAAATGC+AGG | 0.577041 | 1.2:-68009379 | None:intergenic |
| TCTAGCATTGCAGCAACAGA+AGG | 0.578501 | 1.2:-68008846 | None:intergenic |
| AATGTGGAGGGCGAAACCTA+TGG | 0.578503 | 1.2:+68009075 | MS.gene005765:CDS |
| TGGATGGTGGACAAGAATGG+AGG | 0.578543 | 1.2:+68009517 | MS.gene005765:CDS |
| ATGATAGGCTGTCCATAGCT+GGG | 0.578547 | 1.2:-68008960 | None:intergenic |
| GTACGGGGCTCCCTTTGTTG+AGG | 0.584130 | 1.2:+68007793 | MS.gene005765:CDS |
| ATATATCTGATCTATATGGT+GGG | 0.590562 | 1.2:+68008631 | MS.gene005765:CDS |
| AGATGTCGAAGCTGAAGACA+AGG | 0.592347 | 1.2:+68007278 | None:intergenic |
| GCGAACCTGATCGAGGTCAT+GGG | 0.593464 | 1.2:-68008032 | None:intergenic |
| AGGATGCTTATGTCCTGTGT+AGG | 0.594455 | 1.2:+68007729 | MS.gene005765:intron |
| ATTGATACCAGTAACACAGT+TGG | 0.598796 | 1.2:+68008471 | MS.gene005765:CDS |
| TGGTTCGGGGCCTAAGAATG+GGG | 0.603951 | 1.2:+68007766 | MS.gene005765:CDS |
| AACTCTGATGCAAATGCAGG+TGG | 0.607180 | 1.2:-68009376 | None:intergenic |
| TGAAGACAAGGGATTTGGAA+TGG | 0.611227 | 1.2:+68007290 | MS.gene005765:CDS |
| TGCTTGGGAATACTGAGGAT+GGG | 0.611896 | 1.2:-68008538 | None:intergenic |
| AATTGGATGACTCAGCTGCA+GGG | 0.612514 | 1.2:-68009429 | None:intergenic |
| TGTAGGATCTTCGAGAAGAG+TGG | 0.616842 | 1.2:+68007746 | MS.gene005765:CDS |
| AGGCAATGCGATGGATTGGA+TGG | 0.617737 | 1.2:+68009501 | MS.gene005765:CDS |
| ACAGAAGGATCAATCTCAGT+GGG | 0.618605 | 1.2:-68008831 | None:intergenic |
| GTGCAAGATGGATACAATGG+TGG | 0.619749 | 1.2:+68008666 | MS.gene005765:CDS |
| ATCAGGTACAGAAACTGCCA+AGG | 0.622479 | 1.2:-68007921 | None:intergenic |
| GCTGTCCATAGCTGGGAATG+GGG | 0.625492 | 1.2:-68008953 | None:intergenic |
| TGCAAGATGGATACAATGGT+GGG | 0.628172 | 1.2:+68008667 | MS.gene005765:CDS |
| TGATGAACTCGTGAATCCCT+TGG | 0.630807 | 1.2:+68007904 | MS.gene005765:CDS |
| TTGTCATGAAGATTTACCAA+AGG | 0.633220 | 1.2:+68009137 | MS.gene005765:CDS |
| GGAAAACCCAGTAGACATAA+CGG | 0.635521 | 1.2:-68009548 | None:intergenic |
| CAAATCAGTAAGATAATCAG+GGG | 0.637474 | 1.2:-68008757 | None:intergenic |
| TCAGTGCAAGATGGATACAA+TGG | 0.642636 | 1.2:+68008663 | MS.gene005765:CDS |
| AAAGGTTCATTATCAACAGG+CGG | 0.643229 | 1.2:-68007854 | None:intergenic |
| GGGTCATTGACAGAATGTGG+AGG | 0.644623 | 1.2:+68009062 | MS.gene005765:intron |
| GGTCATTGACAGAATGTGGA+GGG | 0.649146 | 1.2:+68009063 | MS.gene005765:intron |
| TCTTGGTATGTATGAACATG+AGG | 0.652722 | 1.2:+68008593 | MS.gene005765:CDS |
| ATGTTCATACATACCAAGAG+TGG | 0.653226 | 1.2:-68008589 | None:intergenic |
| TAAGAATGGGGAGAAGTACG+GGG | 0.658394 | 1.2:+68007778 | MS.gene005765:CDS |
| TTACTGGAAGACTACTGGCA+AGG | 0.661834 | 1.2:+68007381 | MS.gene005765:CDS |
| GATGTCGAAGCTGAAGACAA+GGG | 0.663983 | 1.2:+68007279 | None:intergenic |
| CAATGCGATGGATTGGATGG+TGG | 0.669977 | 1.2:+68009504 | MS.gene005765:CDS |
| ATAAATGCTTGGGAATACTG+AGG | 0.674761 | 1.2:-68008543 | None:intergenic |
| TCGTGCTATCAAGAATGGAG+AGG | 0.674964 | 1.2:+68007405 | MS.gene005765:CDS |
| AACAGAAGGATCAATCTCAG+TGG | 0.687881 | 1.2:-68008832 | None:intergenic |
| ATGCAACGCGAACCTGATCG+AGG | 0.688963 | 1.2:-68008039 | None:intergenic |
| TCTTCTCGAAGATCCTACAC+AGG | 0.693249 | 1.2:-68007742 | None:intergenic |
| TCAGGTACAGAAACTGCCAA+GGG | 0.701648 | 1.2:-68007920 | None:intergenic |
| CAATTGCTTCGATCACCATG+TGG | 0.709636 | 1.2:-68007475 | None:intergenic |
| TGTGCCTGATTCTACTTACG+AGG | 0.713357 | 1.2:+68007997 | MS.gene005765:CDS |
| TCTTCGAGAAGAGTGGTTCG+GGG | 0.722974 | 1.2:+68007753 | MS.gene005765:CDS |
| AAATCAGTAAGATAATCAGG+GGG | 0.738324 | 1.2:-68008756 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATTAGAATTAAATATGA+TGG | - | chr1.2:68008427-68008446 | None:intergenic | 10.0% |
| !! | AAATTAGAATTAAATATGAT+GGG | - | chr1.2:68008426-68008445 | None:intergenic | 10.0% |
| !! | AATAATATATCTGATCTATA+TGG | + | chr1.2:68008627-68008646 | MS.gene005765:CDS | 15.0% |
| !! | TATAGATCAGATATATTATT+AGG | - | chr1.2:68008627-68008646 | None:intergenic | 15.0% |
| !! | TGATAAAAACAAAAATTAGA+AGG | - | chr1.2:68009291-68009310 | None:intergenic | 15.0% |
| !! | TTTGTGTAATTTATGAAATT+GGG | + | chr1.2:68007640-68007659 | MS.gene005765:intron | 15.0% |
| !!! | AATTTTTGTTTTTATCACTT+CGG | + | chr1.2:68009294-68009313 | MS.gene005765:intron | 15.0% |
| !!! | GATTTATTTATTTTTTATCG+TGG | + | chr1.2:68008231-68008250 | MS.gene005765:intron | 15.0% |
| !!! | TTTTGTGTAATTTATGAAAT+TGG | + | chr1.2:68007639-68007658 | MS.gene005765:intron | 15.0% |
| !!! | TTTTTGTAATTTATTGAACT+GGG | + | chr1.2:68007616-68007635 | MS.gene005765:intron | 15.0% |
| !! | AAGTAGATAATATAACAAGT+AGG | - | chr1.2:68008392-68008411 | None:intergenic | 20.0% |
| !! | AATGCAAAATTGAAATTCAA+AGG | - | chr1.2:68008711-68008730 | None:intergenic | 20.0% |
| !! | TAGAAATATCTTCAATTACT+AGG | + | chr1.2:68008446-68008465 | MS.gene005765:intron | 20.0% |
| !!! | GTTTTTGTAATTTATTGAAC+TGG | + | chr1.2:68007615-68007634 | MS.gene005765:intron | 20.0% |
| !!! | TTTTTAATCAAACTTTTGCT+GGG | + | chr1.2:68008203-68008222 | MS.gene005765:intron | 20.0% |
| !!! | TTTTTTAATCAAACTTTTGC+TGG | + | chr1.2:68008202-68008221 | MS.gene005765:intron | 20.0% |
| ! | AAAAACATGTTTGTTTGTCA+AGG | - | chr1.2:68009106-68009125 | None:intergenic | 25.0% |
| ! | AATATATCTGATCTATATGG+TGG | + | chr1.2:68008630-68008649 | MS.gene005765:CDS | 25.0% |
| ! | ACGTTCATTAATAAATGCTT+GGG | - | chr1.2:68008556-68008575 | None:intergenic | 25.0% |
| ! | AGAATCCAAGCATATATATT+TGG | - | chr1.2:68008910-68008929 | None:intergenic | 25.0% |
| ! | ATATATCTGATCTATATGGT+GGG | + | chr1.2:68008631-68008650 | MS.gene005765:CDS | 25.0% |
| ! | ATCACGATTCTTAATATCAT+TGG | - | chr1.2:68008802-68008821 | None:intergenic | 25.0% |
| ! | TAAACAATCCAACATCATTA+AGG | - | chr1.2:68008065-68008084 | None:intergenic | 25.0% |
| ! | TACGTTCATTAATAAATGCT+TGG | - | chr1.2:68008557-68008576 | None:intergenic | 25.0% |
| ! | TATTAATGAACGTAAGCAAT+TGG | + | chr1.2:68008563-68008582 | MS.gene005765:CDS | 25.0% |
| ! | TCAAATCAGTAAGATAATCA+GGG | - | chr1.2:68008761-68008780 | None:intergenic | 25.0% |
| !! | AATTCAAAGGATTTTCGTTA+TGG | - | chr1.2:68008698-68008717 | None:intergenic | 25.0% |
| !! | GAATTTCAATTTTGCATTTG+AGG | + | chr1.2:68008713-68008732 | MS.gene005765:CDS | 25.0% |
| !! | TTTTAATCAAACTTTTGCTG+GGG | + | chr1.2:68008204-68008223 | MS.gene005765:intron | 25.0% |
| !!! | ATTACAGACATTACTTTTAG+AGG | + | chr1.2:68009481-68009500 | MS.gene005765:CDS | 25.0% |
| AAATAACAGCTTGAGAAATC+AGG | - | chr1.2:68009217-68009236 | None:intergenic | 30.0% | |
| AAATCAGTAAGATAATCAGG+GGG | - | chr1.2:68008759-68008778 | None:intergenic | 30.0% | |
| AAGACACTTGTTTATCACTT+GGG | + | chr1.2:68007445-68007464 | MS.gene005765:CDS | 30.0% | |
| AATAACAGCTTGAGAAATCA+GGG | - | chr1.2:68009216-68009235 | None:intergenic | 30.0% | |
| AATATCAATTCAGTGCAAGA+TGG | + | chr1.2:68008654-68008673 | MS.gene005765:CDS | 30.0% | |
| AATCAAGCAAAGCAACAAAA+TGG | - | chr1.2:68008184-68008203 | None:intergenic | 30.0% | |
| CAAATCAGTAAGATAATCAG+GGG | - | chr1.2:68008760-68008779 | None:intergenic | 30.0% | |
| CGTTTCCAAATATATATGCT+TGG | + | chr1.2:68008902-68008921 | MS.gene005765:CDS | 30.0% | |
| GTCAAATCAGTAAGATAATC+AGG | - | chr1.2:68008762-68008781 | None:intergenic | 30.0% | |
| TGTCTATCATTCAACAGAAA+AGG | - | chr1.2:68008303-68008322 | None:intergenic | 30.0% | |
| TTCAAAGGTTCATTATCAAC+AGG | - | chr1.2:68007860-68007879 | None:intergenic | 30.0% | |
| TTGTCATGAAGATTTACCAA+AGG | + | chr1.2:68009137-68009156 | MS.gene005765:CDS | 30.0% | |
| ! | AGAAGTATGGTAATAGTATC+AGG | + | chr1.2:68007335-68007354 | MS.gene005765:CDS | 30.0% |
| ! | ATAGCCGTCTTAAAATCTTT+TGG | + | chr1.2:68009040-68009059 | MS.gene005765:intron | 30.0% |
| ! | ATTTTGTAAACTTTGCCTGT+GGG | + | chr1.2:68008114-68008133 | MS.gene005765:intron | 30.0% |
| ! | GATGAGATTTGTGTTTGTTT+TGG | + | chr1.2:68007700-68007719 | MS.gene005765:intron | 30.0% |
| ! | TAGCCGTCTTAAAATCTTTT+GGG | + | chr1.2:68009041-68009060 | MS.gene005765:intron | 30.0% |
| ! | TATTTTGTAAACTTTGCCTG+TGG | + | chr1.2:68008113-68008132 | MS.gene005765:intron | 30.0% |
| !! | AATGAACCTTTGAAACTAGA+AGG | + | chr1.2:68007866-68007885 | MS.gene005765:CDS | 30.0% |
| !! | ATGAACCTTTGAAACTAGAA+GGG | + | chr1.2:68007867-68007886 | MS.gene005765:CDS | 30.0% |
| !! | TTTTTGTGTGTGTGTTATTG+TGG | + | chr1.2:68009234-68009253 | MS.gene005765:intron | 30.0% |
| AAAGGTTCATTATCAACAGG+CGG | - | chr1.2:68007857-68007876 | None:intergenic | 35.0% | |
| AAGCATTCAATTTATCCCAC+AGG | - | chr1.2:68008132-68008151 | None:intergenic | 35.0% | |
| AATCTGTGCCAAAACATATC+TGG | - | chr1.2:68008265-68008284 | None:intergenic | 35.0% | |
| AATTCAGCTCATATAACTGC+AGG | + | chr1.2:68009448-68009467 | MS.gene005765:CDS | 35.0% | |
| AGCAGAGTTAACATCAGTTT+GGG | - | chr1.2:68009572-68009591 | None:intergenic | 35.0% | |
| ATAAATGCTTGGGAATACTG+AGG | - | chr1.2:68008546-68008565 | None:intergenic | 35.0% | |
| ATGTTCATACATACCAAGAG+TGG | - | chr1.2:68008592-68008611 | None:intergenic | 35.0% | |
| ATTGATACCAGTAACACAGT+TGG | + | chr1.2:68008471-68008490 | MS.gene005765:CDS | 35.0% | |
| CTTCAATCCAACTTCTGTTA+TGG | + | chr1.2:68008504-68008523 | MS.gene005765:CDS | 35.0% | |
| GAAGACACTTGTTTATCACT+TGG | + | chr1.2:68007444-68007463 | MS.gene005765:CDS | 35.0% | |
| TAGCAGAGTTAACATCAGTT+TGG | - | chr1.2:68009573-68009592 | None:intergenic | 35.0% | |
| TCATGAAGATTTACCAAAGG+AGG | + | chr1.2:68009140-68009159 | MS.gene005765:CDS | 35.0% | |
| TCTTGGTATGTATGAACATG+AGG | + | chr1.2:68008593-68008612 | MS.gene005765:CDS | 35.0% | |
| TGATTTGACTGATGAGTACT+TGG | + | chr1.2:68008773-68008792 | MS.gene005765:CDS | 35.0% | |
| TGCAGTTATATGAGCTGAAT+TGG | - | chr1.2:68009449-68009468 | None:intergenic | 35.0% | |
| TTAACACCGTTATGTCTACT+GGG | + | chr1.2:68009542-68009561 | MS.gene005765:CDS | 35.0% | |
| TTCATTCATGTTTGTGCTGT+TGG | + | chr1.2:68008088-68008107 | MS.gene005765:intron | 35.0% | |
| TTTAACACCGTTATGTCTAC+TGG | + | chr1.2:68009541-68009560 | MS.gene005765:CDS | 35.0% | |
| ! | AAATCAGGGTTTAAAGTGAG+TGG | - | chr1.2:68009202-68009221 | None:intergenic | 35.0% |
| ! | AATCAGGGTTTAAAGTGAGT+GGG | - | chr1.2:68009201-68009220 | None:intergenic | 35.0% |
| ! | AGCCGTCTTAAAATCTTTTG+GGG | + | chr1.2:68009042-68009061 | MS.gene005765:intron | 35.0% |
| ! | CAATTTTGCATTTGAGGAAC+TGG | + | chr1.2:68008719-68008738 | MS.gene005765:CDS | 35.0% |
| ! | TGATGTTAACTCTGCTACTT+TGG | + | chr1.2:68009576-68009595 | MS.gene005765:CDS | 35.0% |
| !! | ATGCTTTTTATGACGAGCTT+TGG | + | chr1.2:68007966-68007985 | MS.gene005765:CDS | 35.0% |
| !! | GACCCCAAAAGATTTTAAGA+CGG | - | chr1.2:68009047-68009066 | None:intergenic | 35.0% |
| !! | GTAAACCCTTCTAGTTTCAA+AGG | - | chr1.2:68007875-68007894 | None:intergenic | 35.0% |
| !! | TCGTCATAAAAAGCATCCAA+GGG | - | chr1.2:68007962-68007981 | None:intergenic | 35.0% |
| !!! | GAGATTTGTGTTTGTTTTGG+TGG | + | chr1.2:68007703-68007722 | MS.gene005765:intron | 35.0% |
| !!! | TTTGTTTTTATCACTTCGGC+AGG | + | chr1.2:68009298-68009317 | MS.gene005765:intron | 35.0% |
| AACAGAAGGATCAATCTCAG+TGG | - | chr1.2:68008835-68008854 | None:intergenic | 40.0% | |
| AAGGATCGTGCTATCAAGAA+TGG | + | chr1.2:68007400-68007419 | MS.gene005765:CDS | 40.0% | |
| AAGTCCTCGTAAGTAGAATC+AGG | - | chr1.2:68008004-68008023 | None:intergenic | 40.0% | |
| ACACTCTCCATAACAGAAGT+TGG | - | chr1.2:68008514-68008533 | None:intergenic | 40.0% | |
| ACAGAAGGATCAATCTCAGT+GGG | - | chr1.2:68008834-68008853 | None:intergenic | 40.0% | |
| ACATGGTGATCGAAGCAATT+GGG | + | chr1.2:68007477-68007496 | MS.gene005765:CDS | 40.0% | |
| ACCATAACCTGCTCAATGAT+AGG | - | chr1.2:68008978-68008997 | None:intergenic | 40.0% | |
| ACTTGTTTATCACTTGGGTC+GGG | + | chr1.2:68007450-68007469 | MS.gene005765:CDS | 40.0% | |
| AGTCTTCCAGTAACCTCTAT+CGG | - | chr1.2:68007374-68007393 | None:intergenic | 40.0% | |
| ATTGGGTCATGCATGAGTAT+AGG | + | chr1.2:68007494-68007513 | MS.gene005765:CDS | 40.0% | |
| CACTTGTTTATCACTTGGGT+CGG | + | chr1.2:68007449-68007468 | MS.gene005765:CDS | 40.0% | |
| CGTTGCATCCTTAATGATGT+TGG | + | chr1.2:68008054-68008073 | MS.gene005765:intron | 40.0% | |
| CTTTCACTCCTTGCATTCAA+AGG | - | chr1.2:68008933-68008952 | None:intergenic | 40.0% | |
| GGAAAACCCAGTAGACATAA+CGG | - | chr1.2:68009551-68009570 | None:intergenic | 40.0% | |
| GTTTGTCAAGGAACTACCAT+AGG | - | chr1.2:68009094-68009113 | None:intergenic | 40.0% | |
| TATGTTGGCCAACAACCTAT+TGG | - | chr1.2:68009350-68009369 | None:intergenic | 40.0% | |
| TCAGTGCAAGATGGATACAA+TGG | + | chr1.2:68008663-68008682 | MS.gene005765:CDS | 40.0% | |
| TGAAGACAAGGGATTTGGAA+TGG | + | chr1.2:68007290-68007309 | MS.gene005765:CDS | 40.0% | |
| TGCAAGATGGATACAATGGT+GGG | + | chr1.2:68008667-68008686 | MS.gene005765:CDS | 40.0% | |
| TGGATTCTCCTTTGAATGCA+AGG | + | chr1.2:68008922-68008941 | MS.gene005765:CDS | 40.0% | |
| TTCACGAGTTCATCAACATC+AGG | - | chr1.2:68007899-68007918 | None:intergenic | 40.0% | |
| ! | CCAAAACATATCTGGAACGA+TGG | - | chr1.2:68008257-68008276 | None:intergenic | 40.0% |
| ! | CCATCGTTCCAGATATGTTT+TGG | + | chr1.2:68008254-68008273 | MS.gene005765:intron | 40.0% |
| ! | CTTTTGTGAAGCATGCCAAT+AGG | + | chr1.2:68009332-68009351 | MS.gene005765:CDS | 40.0% |
| ! | TAATCAAACTTTTGCTGGGG+TGG | + | chr1.2:68008207-68008226 | MS.gene005765:intron | 40.0% |
| ! | TTCTGTACCTGATGATGTAC+TGG | + | chr1.2:68007931-68007950 | MS.gene005765:CDS | 40.0% |
| !! | CTCGTCATAAAAAGCATCCA+AGG | - | chr1.2:68007963-68007982 | None:intergenic | 40.0% |
| !! | TACTTTTAGAGGCAATGCGA+TGG | + | chr1.2:68009492-68009511 | MS.gene005765:CDS | 40.0% |
| !!! | TGTGTTTGTTTTGGTGGAGA+AGG | + | chr1.2:68007709-68007728 | MS.gene005765:intron | 40.0% |
| AACTCTGATGCAAATGCAGG+TGG | - | chr1.2:68009379-68009398 | None:intergenic | 45.0% | |
| AAGAATGGAGAGGAGACTGT+TGG | + | chr1.2:68007415-68007434 | MS.gene005765:CDS | 45.0% | |
| AAGCAATTGGAAGCCACTCT+TGG | + | chr1.2:68008576-68008595 | MS.gene005765:CDS | 45.0% | |
| AATGATAGGCTGTCCATAGC+TGG | - | chr1.2:68008964-68008983 | None:intergenic | 45.0% | |
| AATTGGATGACTCAGCTGCA+GGG | - | chr1.2:68009432-68009451 | None:intergenic | 45.0% | |
| ACTGCGTTGGACAAGAAGTA+TGG | + | chr1.2:68007322-68007341 | MS.gene005765:CDS | 45.0% | |
| AGAGGTTACTGGAAGACTAC+TGG | + | chr1.2:68007376-68007395 | MS.gene005765:CDS | 45.0% | |
| AGAGTTTCCTGCTAAGGAGT+TGG | + | chr1.2:68009393-68009412 | MS.gene005765:CDS | 45.0% | |
| AGCACTTCCAACTGTGTTAC+TGG | - | chr1.2:68008481-68008500 | None:intergenic | 45.0% | |
| AGGATGCTTATGTCCTGTGT+AGG | + | chr1.2:68007729-68007748 | MS.gene005765:intron | 45.0% | |
| ATCAGGTACAGAAACTGCCA+AGG | - | chr1.2:68007924-68007943 | None:intergenic | 45.0% | |
| ATCTTCGAGAAGAGTGGTTC+GGG | + | chr1.2:68007752-68007771 | MS.gene005765:CDS | 45.0% | |
| ATGATAGGCTGTCCATAGCT+GGG | - | chr1.2:68008963-68008982 | None:intergenic | 45.0% | |
| ATGCTTGGGAATACTGAGGA+TGG | - | chr1.2:68008542-68008561 | None:intergenic | 45.0% | |
| ATGGTACTTCTTCACTGCGT+TGG | + | chr1.2:68007309-68007328 | MS.gene005765:CDS | 45.0% | |
| CAATTGCTTCGATCACCATG+TGG | - | chr1.2:68007478-68007497 | None:intergenic | 45.0% | |
| CACATGGTGATCGAAGCAAT+TGG | + | chr1.2:68007476-68007495 | MS.gene005765:CDS | 45.0% | |
| CCTAAGAATGGGGAGAAGTA+CGG | + | chr1.2:68007776-68007795 | MS.gene005765:CDS | 45.0% | |
| CTGTAACCTGAGACCCAATT+TGG | - | chr1.2:68009177-68009196 | None:intergenic | 45.0% | |
| GAAGCATGCCAATAGGTTGT+TGG | + | chr1.2:68009339-68009358 | MS.gene005765:CDS | 45.0% | |
| GAAGCTGAAGACAAGGGATT+TGG | + | chr1.2:68007285-68007304 | MS.gene005765:CDS | 45.0% | |
| GATCTTCGAGAAGAGTGGTT+CGG | + | chr1.2:68007751-68007770 | MS.gene005765:CDS | 45.0% | |
| GATGAGACTTTAGCCAAAGC+TGG | + | chr1.2:68007523-68007542 | MS.gene005765:CDS | 45.0% | |
| GCCTATCATTGAGCAGGTTA+TGG | + | chr1.2:68008974-68008993 | MS.gene005765:intron | 45.0% | |
| GGAAACTCTGATGCAAATGC+AGG | - | chr1.2:68009382-68009401 | None:intergenic | 45.0% | |
| GGTCATTGACAGAATGTGGA+GGG | + | chr1.2:68009063-68009082 | MS.gene005765:intron | 45.0% | |
| GTGCAAGATGGATACAATGG+TGG | + | chr1.2:68008666-68008685 | MS.gene005765:CDS | 45.0% | |
| TAATACCTGCACTCCAGCTT+TGG | - | chr1.2:68007539-68007558 | None:intergenic | 45.0% | |
| TCAGGTACAGAAACTGCCAA+GGG | - | chr1.2:68007923-68007942 | None:intergenic | 45.0% | |
| TCCCATTCCTCCTCAACAAA+GGG | - | chr1.2:68007806-68007825 | None:intergenic | 45.0% | |
| TCCCTTTGTTGAGGAGGAAT+GGG | + | chr1.2:68007802-68007821 | MS.gene005765:CDS | 45.0% | |
| TCGTGCTATCAAGAATGGAG+AGG | + | chr1.2:68007405-68007424 | MS.gene005765:CDS | 45.0% | |
| TCTAGCATTGCAGCAACAGA+AGG | - | chr1.2:68008849-68008868 | None:intergenic | 45.0% | |
| TCTTCTCGAAGATCCTACAC+AGG | - | chr1.2:68007745-68007764 | None:intergenic | 45.0% | |
| TGATGAACTCGTGAATCCCT+TGG | + | chr1.2:68007904-68007923 | MS.gene005765:CDS | 45.0% | |
| TGCATCAGAGTTTCCTGCTA+AGG | + | chr1.2:68009387-68009406 | MS.gene005765:CDS | 45.0% | |
| TGCTTGGGAATACTGAGGAT+GGG | - | chr1.2:68008541-68008560 | None:intergenic | 45.0% | |
| TGTAGGATCTTCGAGAAGAG+TGG | + | chr1.2:68007746-68007765 | MS.gene005765:CDS | 45.0% | |
| TGTGCCTGATTCTACTTACG+AGG | + | chr1.2:68007997-68008016 | MS.gene005765:CDS | 45.0% | |
| TTACTGGAAGACTACTGGCA+AGG | + | chr1.2:68007381-68007400 | MS.gene005765:CDS | 45.0% | |
| TTAGAGGCAATGCGATGGAT+TGG | + | chr1.2:68009497-68009516 | MS.gene005765:CDS | 45.0% | |
| TTGGGGTCATTGACAGAATG+TGG | + | chr1.2:68009059-68009078 | MS.gene005765:intron | 45.0% | |
| ! | CTAAGAATGGGGAGAAGTAC+GGG | + | chr1.2:68007777-68007796 | MS.gene005765:CDS | 45.0% |
| ! | GAGGAGGAATGGGAGAATTT+TGG | + | chr1.2:68007812-68007831 | MS.gene005765:CDS | 45.0% |
| ! | TAAGAATGGGGAGAAGTACG+GGG | + | chr1.2:68007778-68007797 | MS.gene005765:CDS | 45.0% |
| ! | TGTACCTGATGATGTACTGG+TGG | + | chr1.2:68007934-68007953 | MS.gene005765:CDS | 45.0% |
| !! | GATTGGATGGTGGACAAGAA+TGG | + | chr1.2:68009514-68009533 | MS.gene005765:CDS | 45.0% |
| !! | GCTACTTTGGTGCCTATTTC+TGG | + | chr1.2:68009589-68009608 | MS.gene005765:CDS | 45.0% |
| AATGTGGAGGGCGAAACCTA+TGG | + | chr1.2:68009075-68009094 | MS.gene005765:CDS | 50.0% | |
| ACGAATCGTGCTACCGATAG+AGG | + | chr1.2:68007358-68007377 | MS.gene005765:CDS | 50.0% | |
| AGGATCTAGCAGCGCCAAAT+TGG | + | chr1.2:68009160-68009179 | MS.gene005765:CDS | 50.0% | |
| CCGTACTTCTCCCCATTCTT+AGG | - | chr1.2:68007779-68007798 | None:intergenic | 50.0% | |
| CTCCCATTCCTCCTCAACAA+AGG | - | chr1.2:68007807-68007826 | None:intergenic | 50.0% | |
| CTCCCTTTGTTGAGGAGGAA+TGG | + | chr1.2:68007801-68007820 | MS.gene005765:CDS | 50.0% | |
| GAATTGGATGACTCAGCTGC+AGG | - | chr1.2:68009433-68009452 | None:intergenic | 50.0% | |
| GGATCCACCAGTACATCATC+AGG | - | chr1.2:68007941-68007960 | None:intergenic | 50.0% | |
| GGATCTAGCAGCGCCAAATT+GGG | + | chr1.2:68009161-68009180 | MS.gene005765:CDS | 50.0% | |
| GGGTCATTGACAGAATGTGG+AGG | + | chr1.2:68009062-68009081 | MS.gene005765:intron | 50.0% | |
| GTGCTACCGATAGAGGTTAC+TGG | + | chr1.2:68007365-68007384 | MS.gene005765:CDS | 50.0% | |
| TCTTCGAGAAGAGTGGTTCG+GGG | + | chr1.2:68007753-68007772 | MS.gene005765:CDS | 50.0% | |
| TGAAACCCATGACCTCGATC+AGG | + | chr1.2:68008027-68008046 | MS.gene005765:CDS | 50.0% | |
| TGGACAGCCTATCATTGAGC+AGG | + | chr1.2:68008968-68008987 | MS.gene005765:CDS | 50.0% | |
| TTTAGCCAAAGCTGGAGTGC+AGG | + | chr1.2:68007531-68007550 | MS.gene005765:CDS | 50.0% | |
| ! | TGATGTACTGGTGGATCCCT+TGG | + | chr1.2:68007943-68007962 | MS.gene005765:CDS | 50.0% |
| !! | AGGCAATGCGATGGATTGGA+TGG | + | chr1.2:68009501-68009520 | MS.gene005765:CDS | 50.0% |
| !! | CAATGCGATGGATTGGATGG+TGG | + | chr1.2:68009504-68009523 | MS.gene005765:CDS | 50.0% |
| !! | CTGCTAAGGAGTTGGCTTGT+GGG | + | chr1.2:68009401-68009420 | MS.gene005765:CDS | 50.0% |
| !! | TGGATGGTGGACAAGAATGG+AGG | + | chr1.2:68009517-68009536 | MS.gene005765:CDS | 50.0% |
| AAACGTCGTCGTCGTCGTCA+GGG | - | chr1.2:68008887-68008906 | None:intergenic | 55.0% | |
| AGGCTGTCCATAGCTGGGAA+TGG | - | chr1.2:68008958-68008977 | None:intergenic | 55.0% | |
| ATGCAACGCGAACCTGATCG+AGG | - | chr1.2:68008042-68008061 | None:intergenic | 55.0% | |
| CCACAAGCCAACTCCTTAGC+AGG | - | chr1.2:68009403-68009422 | None:intergenic | 55.0% | |
| GAAAGCCCCATTCCCAGCTA+TGG | + | chr1.2:68008948-68008967 | MS.gene005765:CDS | 55.0% | |
| GATGCAAATGCAGGTGGAGC+AGG | - | chr1.2:68009373-68009392 | None:intergenic | 55.0% | |
| GCGAACCTGATCGAGGTCAT+GGG | - | chr1.2:68008035-68008054 | None:intergenic | 55.0% | |
| GCTGTCCATAGCTGGGAATG+GGG | - | chr1.2:68008956-68008975 | None:intergenic | 55.0% | |
| GGCTGTCCATAGCTGGGAAT+GGG | - | chr1.2:68008957-68008976 | None:intergenic | 55.0% | |
| TGCAGGTGGAGCAGGTATGT+TGG | - | chr1.2:68009365-68009384 | None:intergenic | 55.0% | |
| ! | AGTGGTTCGGGGCCTAAGAA+TGG | + | chr1.2:68007764-68007783 | MS.gene005765:CDS | 55.0% |
| ! | GTGGTTCGGGGCCTAAGAAT+GGG | + | chr1.2:68007765-68007784 | MS.gene005765:CDS | 55.0% |
| ! | TGGTTCGGGGCCTAAGAATG+GGG | + | chr1.2:68007766-68007785 | MS.gene005765:CDS | 55.0% |
| !! | CCTGCTAAGGAGTTGGCTTG+TGG | + | chr1.2:68009400-68009419 | MS.gene005765:CDS | 55.0% |
| CGCGAACCTGATCGAGGTCA+TGG | - | chr1.2:68008036-68008055 | None:intergenic | 60.0% | |
| GAAACGTCGTCGTCGTCGTC+AGG | - | chr1.2:68008888-68008907 | None:intergenic | 60.0% | |
| GCAGCGCCAAATTGGGTCTC+AGG | + | chr1.2:68009168-68009187 | MS.gene005765:CDS | 60.0% | |
| GGCGCTGCTAGATCCTCCTT+TGG | - | chr1.2:68009156-68009175 | None:intergenic | 60.0% | |
| GTACGGGGCTCCCTTTGTTG+AGG | + | chr1.2:68007793-68007812 | MS.gene005765:CDS | 60.0% | |
| CACTTGGGTCGGGCTCCACA+TGG | + | chr1.2:68007460-68007479 | MS.gene005765:CDS | 65.0% | |
| CGGGGCTCCCTTTGTTGAGG+AGG | + | chr1.2:68007796-68007815 | MS.gene005765:CDS | 65.0% | |
| CGTCGTCGTCAGGGCATGCA+AGG | - | chr1.2:68008878-68008897 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 68007280 | 68009615 | 68007280 | ID=MS.gene005765 |
| chr1.2 | mRNA | 68007280 | 68009615 | 68007280 | ID=MS.gene005765.t1;Parent=MS.gene005765 |
| chr1.2 | exon | 68007280 | 68007552 | 68007280 | ID=MS.gene005765.t1.exon1;Parent=MS.gene005765.t1 |
| chr1.2 | CDS | 68007280 | 68007552 | 68007280 | ID=cds.MS.gene005765.t1;Parent=MS.gene005765.t1 |
| chr1.2 | exon | 68007731 | 68008048 | 68007731 | ID=MS.gene005765.t1.exon2;Parent=MS.gene005765.t1 |
| chr1.2 | CDS | 68007731 | 68008048 | 68007731 | ID=cds.MS.gene005765.t1;Parent=MS.gene005765.t1 |
| chr1.2 | exon | 68008468 | 68008989 | 68008468 | ID=MS.gene005765.t1.exon3;Parent=MS.gene005765.t1 |
| chr1.2 | CDS | 68008468 | 68008989 | 68008468 | ID=cds.MS.gene005765.t1;Parent=MS.gene005765.t1 |
| chr1.2 | exon | 68009075 | 68009189 | 68009075 | ID=MS.gene005765.t1.exon4;Parent=MS.gene005765.t1 |
| chr1.2 | CDS | 68009075 | 68009189 | 68009075 | ID=cds.MS.gene005765.t1;Parent=MS.gene005765.t1 |
| chr1.2 | exon | 68009320 | 68009615 | 68009320 | ID=MS.gene005765.t1.exon5;Parent=MS.gene005765.t1 |
| chr1.2 | CDS | 68009320 | 68009615 | 68009320 | ID=cds.MS.gene005765.t1;Parent=MS.gene005765.t1 |
| Gene Sequence |
| Protein sequence |