AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene005829

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene005829.t1 MTR_6g470940 90.909 88 5 1 22 109 1058 1142 5.44e-49 166
MS.gene005829.t1 MTR_4g035835 65.909 88 27 1 22 109 939 1023 1.50e-36 131
MS.gene005829.t1 MTR_5g069000 65.909 88 27 1 22 109 943 1027 2.81e-36 130
MS.gene005829.t1 MTR_1g069735 45.263 95 45 4 18 109 305 395 4.21e-17 75.5
MS.gene005829.t1 MTR_1g069735 45.263 95 45 4 18 109 305 395 5.11e-17 75.5
MS.gene005829.t1 MTR_1g069735 45.263 95 45 4 18 109 305 395 6.53e-17 75.1
MS.gene005829.t1 MTR_7g097150 44.211 95 46 4 18 109 305 395 1.15e-16 74.3
MS.gene005829.t1 MTR_1g075880 46.988 83 38 3 29 109 315 393 1.16e-16 74.3
MS.gene005829.t1 MTR_7g073520 44.186 86 42 2 22 107 297 376 1.69e-16 73.9
MS.gene005829.t1 MTR_1g442790 45.455 88 42 3 22 107 302 385 1.88e-16 73.6
MS.gene005829.t1 MTR_1g442790 45.455 88 42 3 22 107 302 385 2.13e-16 73.6
MS.gene005829.t1 MTR_1g019340 47.253 91 41 4 22 109 299 385 4.58e-16 72.4
MS.gene005829.t1 MTR_1g042700 45.679 81 41 1 29 109 314 391 1.04e-15 71.6
MS.gene005829.t1 MTR_3g104700 44.186 86 46 2 24 109 295 378 1.09e-15 71.6
MS.gene005829.t1 MTR_1g019340 48.193 83 37 3 29 109 307 385 1.38e-15 71.2
MS.gene005829.t1 MTR_3g104700 57.143 49 21 0 24 72 295 343 3.84e-15 70.1
MS.gene005829.t1 MTR_7g053200 59.574 47 19 0 26 72 237 283 8.36e-15 68.9
MS.gene005829.t1 MTR_7g033640 42.683 82 43 3 26 107 468 545 1.37e-14 68.6
MS.gene005829.t1 MTR_2g040150 61.364 44 17 0 29 72 319 362 2.34e-14 67.8
MS.gene005829.t1 MTR_8g011780 46.154 65 29 1 13 71 227 291 2.65e-14 67.4
MS.gene005829.t1 MTR_2g027240 42.683 82 43 3 26 107 440 517 2.76e-14 67.4
MS.gene005829.t1 MTR_6g004720 42.683 82 43 3 26 107 480 557 4.24e-14 67.0
MS.gene005829.t1 MTR_4g061610 38.824 85 48 2 25 109 822 902 8.92e-14 66.2
MS.gene005829.t1 MTR_4g107280 38.824 85 46 2 23 107 207 285 9.19e-14 65.9
MS.gene005829.t1 MTR_2g095980 38.554 83 47 2 25 107 563 641 9.25e-14 66.2
MS.gene005829.t1 MTR_4g107280 38.824 85 46 2 23 107 246 324 9.46e-14 65.9
MS.gene005829.t1 MTR_2g095980 42.857 70 37 2 25 94 818 884 1.85e-13 65.1
MS.gene005829.t1 MTR_2g095980 42.857 70 37 2 25 94 818 884 2.36e-13 65.1
MS.gene005829.t1 MTR_1g060790 40.244 82 45 2 26 107 700 777 3.10e-13 64.7
MS.gene005829.t1 MTR_4g113790 37.647 85 44 2 26 107 329 407 6.85e-13 63.5
MS.gene005829.t1 MTR_2g062850 42.169 83 42 4 26 107 399 476 8.14e-13 63.5
MS.gene005829.t1 MTR_7g081665 43.038 79 41 3 29 107 596 670 1.11e-12 63.2
MS.gene005829.t1 MTR_2g085065 41.667 84 45 3 26 109 320 399 1.13e-12 62.8
MS.gene005829.t1 MTR_8g006870 43.038 79 41 3 29 107 603 677 1.17e-12 62.8
MS.gene005829.t1 MTR_3g010260 39.024 82 46 2 26 107 647 724 1.39e-12 62.8
MS.gene005829.t1 MTR_3g088715 34.524 84 51 2 25 108 24 103 1.98e-12 59.7
MS.gene005829.t1 MTR_8g035890 35.294 85 51 2 25 109 166 246 1.99e-12 61.6
MS.gene005829.t1 MTR_7g104180 40.244 82 45 2 26 107 722 799 2.93e-12 62.0
MS.gene005829.t1 MTR_7g113490 35.000 80 50 1 28 107 231 308 5.39e-12 61.2
MS.gene005829.t1 MTR_8g446990 41.463 82 44 3 26 107 362 439 5.49e-12 60.8
MS.gene005829.t1 MTR_6g087000 43.038 79 41 2 31 109 917 991 5.86e-12 60.8
MS.gene005829.t1 MTR_2g069990 40.476 84 46 2 28 109 297 378 1.00e-11 60.1
MS.gene005829.t1 MTR_8g070530 38.095 84 46 3 26 108 782 860 1.16e-11 60.1
MS.gene005829.t1 MTR_1g080020 37.647 85 49 2 26 109 162 243 5.59e-11 57.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene005829.t1 AT3G17850 80.460 87 14 1 23 109 1064 1147 1.28e-42 148
MS.gene005829.t1 AT5G62310 63.725 102 33 2 9 109 921 1019 4.29e-39 138
MS.gene005829.t1 AT1G45160 67.816 87 25 1 23 109 848 931 9.14e-37 131
MS.gene005829.t1 AT1G45160 67.816 87 25 1 23 109 848 931 9.61e-37 131
MS.gene005829.t1 AT1G48490 74.699 83 18 1 27 109 1008 1087 5.03e-36 129
MS.gene005829.t1 AT1G48490 74.699 83 18 1 27 109 1008 1087 5.03e-36 129
MS.gene005829.t1 AT1G48490 74.699 83 18 1 27 109 1008 1087 5.03e-36 129
MS.gene005829.t1 AT1G48490 74.699 83 18 1 27 109 1009 1088 5.03e-36 129
MS.gene005829.t1 AT3G23310 47.368 95 43 4 18 109 308 398 2.82e-18 79.0
MS.gene005829.t1 AT4G14350 46.809 94 43 4 19 109 306 395 1.89e-17 76.6
MS.gene005829.t1 AT4G14350 46.809 94 43 4 19 109 306 395 2.06e-17 76.6
MS.gene005829.t1 AT4G14350 46.809 94 43 4 19 109 306 395 2.06e-17 76.6
MS.gene005829.t1 AT4G14350 46.809 94 43 4 19 109 306 395 2.06e-17 76.6
MS.gene005829.t1 AT1G30640 49.398 83 36 3 29 109 322 400 7.69e-17 74.7
MS.gene005829.t1 AT1G30640 49.398 83 36 3 29 109 322 400 7.69e-17 74.7
MS.gene005829.t1 AT1G30640 49.398 83 36 3 29 109 229 307 8.89e-17 74.7
MS.gene005829.t1 AT2G20470 44.681 94 45 4 18 108 308 397 4.18e-16 72.8
MS.gene005829.t1 AT2G20470 44.681 94 45 4 18 108 308 397 4.22e-16 72.8
MS.gene005829.t1 AT2G20470 44.681 94 45 4 18 108 308 397 4.22e-16 72.8
MS.gene005829.t1 AT3G27580 45.122 82 41 3 26 107 412 489 9.29e-16 71.6
MS.gene005829.t1 AT3G27580 45.122 82 41 3 26 107 412 489 9.29e-16 71.6
MS.gene005829.t1 AT5G09890 46.154 91 42 4 22 109 295 381 3.44e-15 70.1
MS.gene005829.t1 AT5G09890 46.154 91 42 4 22 109 295 381 3.44e-15 70.1
MS.gene005829.t1 AT3G08720 42.353 85 42 2 23 107 290 367 8.86e-15 68.9
MS.gene005829.t1 AT3G08720 42.353 85 42 2 23 107 290 367 8.86e-15 68.9
MS.gene005829.t1 AT3G08720 42.353 85 42 2 23 107 290 367 8.86e-15 68.9
MS.gene005829.t1 AT3G08720 42.353 85 42 2 23 107 290 367 8.86e-15 68.9
MS.gene005829.t1 AT4G33080 57.447 47 20 0 24 70 295 341 1.12e-14 68.6
MS.gene005829.t1 AT4G33080 57.447 47 20 0 24 70 295 341 1.19e-14 68.6
MS.gene005829.t1 AT1G03920 61.905 42 16 0 29 70 334 375 1.40e-14 68.6
MS.gene005829.t1 AT1G03920 61.905 42 16 0 29 70 334 375 1.40e-14 68.6
MS.gene005829.t1 AT1G03920 61.905 42 16 0 29 70 221 262 1.88e-14 68.2
MS.gene005829.t1 AT2G19400 57.143 49 21 0 24 72 306 354 1.93e-14 68.2
MS.gene005829.t1 AT3G08730 41.176 85 43 2 23 107 284 361 2.21e-14 67.8
MS.gene005829.t1 AT3G08730 41.176 85 43 2 23 107 284 361 2.21e-14 67.8
MS.gene005829.t1 AT4G26610 42.683 82 43 3 26 107 352 429 5.53e-14 66.6
MS.gene005829.t1 AT5G03640 39.024 82 46 2 26 107 774 851 6.50e-14 66.6
MS.gene005829.t1 AT5G03640 39.024 82 46 2 26 107 774 851 6.50e-14 66.6
MS.gene005829.t1 AT5G55910 42.683 82 43 3 26 107 342 419 7.68e-14 66.2
MS.gene005829.t1 AT5G55910 42.683 82 43 3 26 107 342 419 7.68e-14 66.2
MS.gene005829.t1 AT2G20050 44.304 79 40 2 31 109 936 1010 8.61e-14 66.2
MS.gene005829.t1 AT5G47750 42.683 82 43 3 26 107 423 500 8.63e-14 66.2
MS.gene005829.t1 AT2G20050 44.304 79 40 2 31 109 939 1013 8.78e-14 66.2
MS.gene005829.t1 AT3G52890 42.353 85 39 3 26 107 775 852 1.49e-13 65.5
MS.gene005829.t1 AT3G52890 42.353 85 39 3 26 107 775 852 1.49e-13 65.5
MS.gene005829.t1 AT3G52890 42.353 85 39 3 26 107 775 852 1.49e-13 65.5
MS.gene005829.t1 AT3G52890 42.353 85 39 3 26 107 775 852 1.49e-13 65.5
MS.gene005829.t1 AT1G79250 41.463 82 44 2 26 107 376 453 1.49e-13 65.5
MS.gene005829.t1 AT1G79250 41.463 82 44 2 26 107 376 453 1.49e-13 65.5
MS.gene005829.t1 AT1G79250 41.463 82 44 2 26 107 376 453 1.49e-13 65.5
MS.gene005829.t1 AT1G79250 41.463 82 44 2 26 107 376 453 1.49e-13 65.5
MS.gene005829.t1 AT5G40030 41.463 82 43 3 26 107 340 416 2.28e-13 65.1
MS.gene005829.t1 AT2G36350 39.286 84 47 2 26 109 794 873 2.59e-13 65.1
MS.gene005829.t1 AT1G53700 37.805 82 48 1 28 109 297 375 3.95e-13 64.3
MS.gene005829.t1 AT3G45780 39.535 86 46 4 25 109 847 927 1.17e-12 63.2
MS.gene005829.t1 AT3G45780 39.535 86 46 4 25 109 847 927 1.17e-12 63.2
MS.gene005829.t1 AT3G06030 35.000 80 49 1 28 107 231 307 1.28e-12 62.8
MS.gene005829.t1 AT4G13000 53.333 45 21 0 26 70 225 269 1.57e-12 62.4
MS.gene005829.t1 AT3G25250 53.333 45 21 0 26 70 232 276 2.12e-12 62.0
MS.gene005829.t1 AT3G12690 40.506 79 43 2 29 107 408 482 2.42e-12 62.0
MS.gene005829.t1 AT3G12690 40.506 79 43 2 29 107 408 482 2.42e-12 62.0
MS.gene005829.t1 AT3G12690 40.506 79 43 2 29 107 408 482 2.42e-12 62.0
MS.gene005829.t1 AT3G44610 40.476 84 46 3 26 109 309 388 2.53e-12 62.0
MS.gene005829.t1 AT2G26700 36.047 86 46 2 26 108 354 433 3.08e-12 61.6
MS.gene005829.t1 AT5G58140 38.095 84 46 3 26 108 760 838 3.17e-12 61.6
MS.gene005829.t1 AT2G44830 36.538 104 62 3 4 107 571 670 5.30e-12 61.2
MS.gene005829.t1 AT2G44830 36.538 104 62 3 4 107 571 670 5.30e-12 61.2
MS.gene005829.t1 AT2G44830 36.538 104 62 3 4 107 571 670 5.30e-12 61.2
MS.gene005829.t1 AT5G58140 39.706 68 38 1 26 93 760 824 7.68e-12 60.8
MS.gene005829.t1 AT5G58140 39.706 68 38 1 26 93 760 824 7.68e-12 60.8
MS.gene005829.t1 AT5G58140 39.706 68 38 1 26 93 760 824 7.68e-12 60.8
MS.gene005829.t1 AT5G58140 39.706 68 38 1 26 93 760 824 7.68e-12 60.8
MS.gene005829.t1 AT5G58140 39.706 68 38 1 26 93 760 824 7.68e-12 60.8
MS.gene005829.t1 AT3G14370 54.545 44 20 0 28 71 293 336 1.30e-11 60.1
MS.gene005829.t1 AT1G16440 39.024 82 46 3 26 107 332 409 2.43e-11 59.3
MS.gene005829.t1 AT1G09000 33.750 80 50 1 28 107 232 308 2.60e-11 59.3
MS.gene005829.t1 AT1G09000 33.750 80 50 1 28 107 232 308 3.14e-11 58.9
MS.gene005829.t1 AT1G54960 35.000 80 49 2 28 107 231 307 3.41e-11 58.9
MS.gene005829.t1 AT1G54960 35.000 80 49 2 28 107 231 307 3.41e-11 58.9

Find 27 sgRNAs with CRISPR-Local

Find 55 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCATTTCGTCGGGAACTTC+AGG 0.295980 1.1:+67179789 None:intergenic
CTGCGGATTGGTGGTCTGTT+GGG 0.324256 1.1:-67179995 MS.gene005829:CDS
CGTTCCCTTCCTCCGTTCTC+AGG 0.381241 1.1:+67180413 None:intergenic
ACTGCGGATTGGTGGTCTGT+TGG 0.420353 1.1:-67179996 MS.gene005829:CDS
ATCTCAGGAGCTAAGTAATC+AGG 0.429237 1.1:+67180362 None:intergenic
GGTATTCCACCCTTCAACTC+AGG 0.431664 1.1:-67179948 MS.gene005829:CDS
CCAGTTCCTAAAAGTATCTC+AGG 0.463458 1.1:+67180347 None:intergenic
CAAAGTTAAACCTGAGTTGA+AGG 0.467216 1.1:+67179938 None:intergenic
TTCTTAATCGTAAGATACCT+TGG 0.479559 1.1:-67179812 MS.gene005829:CDS
CAGCGTATACTGCGGATTGG+TGG 0.508993 1.1:-67180004 MS.gene005829:CDS
AGGAAGAAGCGTTCCGCTGT+TGG 0.509264 1.1:-67180389 MS.gene005829:CDS
GCTTCAAGACTCATTTCGTC+GGG 0.510873 1.1:+67179780 None:intergenic
TGCTTCAAGACTCATTTCGT+CGG 0.519672 1.1:+67179779 None:intergenic
TTGCAGCGTATACTGCGGAT+TGG 0.527291 1.1:-67180007 MS.gene005829:intron
ACCACACAGAAACATGTCAT+TGG 0.533806 1.1:-67180591 None:intergenic
TAGCTCCTGAGAACGGAGGA+AGG 0.550507 1.1:-67180418 MS.gene005829:CDS
TCGTCGGGAACTTCAGGCCA+AGG 0.554191 1.1:+67179795 None:intergenic
TGCGGATTGGTGGTCTGTTG+GGG 0.554893 1.1:-67179994 MS.gene005829:CDS
CTGAGAACGGAGGAAGGGAA+CGG 0.588381 1.1:-67180412 MS.gene005829:CDS
GATTACTTAGCTCCTGAGAA+CGG 0.591680 1.1:-67180425 MS.gene005829:CDS
AAGCACATGATCTTATTGAT+CGG 0.593041 1.1:-67179761 MS.gene005829:CDS
AGCTCCTGAGAACGGAGGAA+GGG 0.604860 1.1:-67180417 MS.gene005829:CDS
AAAGTTAAACCTGAGTTGAA+GGG 0.612794 1.1:+67179939 None:intergenic
GTTAAACCTGAGTTGAAGGG+TGG 0.613746 1.1:+67179942 None:intergenic
AGAACGGAGGAAGGGAACGG+AGG 0.664935 1.1:-67180409 MS.gene005829:CDS
GTAATCAGGTGTGCCAACAG+CGG 0.675334 1.1:+67180376 None:intergenic
TACTTAGCTCCTGAGAACGG+AGG 0.696955 1.1:-67180422 MS.gene005829:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TGTTTATATTTTTATTCTTT+TGG - chr1.1:67180438-67180457 MS.gene005829:CDS 10.0%
!!! ATTTGAACAAATATTTTTGC+AGG + chr1.1:67180308-67180327 None:intergenic 20.0%
! AACCACCTTAAACATATAAA+TGG + chr1.1:67180032-67180051 None:intergenic 25.0%
! ACACAAAATTACATAATCTG+TGG + chr1.1:67180482-67180501 None:intergenic 25.0%
! ACCACCTTAAACATATAAAT+GGG + chr1.1:67180031-67180050 None:intergenic 25.0%
! AGGCTACTATAATAACAAAA+AGG + chr1.1:67180209-67180228 None:intergenic 25.0%
! GGCTACTATAATAACAAAAA+GGG + chr1.1:67180208-67180227 None:intergenic 25.0%
! TAGTCCCATTTATATGTTTA+AGG - chr1.1:67180024-67180043 MS.gene005829:intron 25.0%
!! TTGGTTCAATAGTAAGATTT+TGG - chr1.1:67179764-67179783 MS.gene005829:CDS 25.0%
!! TTTTTCATCGCTTAAAATGA+AGG - chr1.1:67180066-67180085 MS.gene005829:intron 25.0%
!!! ATTTTATTTGAGTTGCTTGT+TGG - chr1.1:67180367-67180386 MS.gene005829:CDS 25.0%
AAGCACATGATCTTATTGAT+CGG - chr1.1:67180575-67180594 MS.gene005829:intron 30.0%
AATCAACCGAAAAAAACACT+CGG + chr1.1:67179895-67179914 None:intergenic 30.0%
TCCCATTTATATGTTTAAGG+TGG - chr1.1:67180027-67180046 MS.gene005829:intron 30.0%
TTCTTAATCGTAAGATACCT+TGG - chr1.1:67180524-67180543 MS.gene005829:intron 30.0%
! AAAGTTAAACCTGAGTTGAA+GGG + chr1.1:67180400-67180419 None:intergenic 30.0%
! ATGTGTCAAACATTTTTGCA+AGG - chr1.1:67179795-67179814 MS.gene005829:CDS 30.0%
TGTAAAACCACTAAATCAGC+AGG + chr1.1:67180229-67180248 None:intergenic 35.0%
! AAATTTTGCAGCGTATACTG+CGG - chr1.1:67180324-67180343 MS.gene005829:intron 35.0%
! CAAAGTTAAACCTGAGTTGA+AGG + chr1.1:67180401-67180420 None:intergenic 35.0%
! TTAGCTCCTGAGATACTTTT+AGG - chr1.1:67179983-67180002 MS.gene005829:CDS 35.0%
!! ATACTTTTAGGAACTGGACA+TGG - chr1.1:67179995-67180014 MS.gene005829:CDS 35.0%
!!! TAACAGCCGAGTGTTTTTTT+CGG - chr1.1:67179886-67179905 MS.gene005829:intron 35.0%
ATCTCAGGAGCTAAGTAATC+AGG + chr1.1:67179977-67179996 None:intergenic 40.0%
ATTTAGCTACTCCACTGTCA+TGG + chr1.1:67179824-67179843 None:intergenic 40.0%
CTAAATCTCAGCATGGAGAT+TGG - chr1.1:67179838-67179857 MS.gene005829:intron 40.0%
GATTACTTAGCTCCTGAGAA+CGG - chr1.1:67179911-67179930 MS.gene005829:intron 40.0%
TGCTTCAAGACTCATTTCGT+CGG + chr1.1:67180560-67180579 None:intergenic 40.0%
! TCTGCATTTGGTTTCGGTTT+GGG - chr1.1:67179862-67179881 MS.gene005829:intron 40.0%
!! ATAGTAGCCTGCTGATTTAG+TGG - chr1.1:67180219-67180238 MS.gene005829:intron 40.0%
!! ATTGGCTCTGCATTTGGTTT+CGG - chr1.1:67179856-67179875 MS.gene005829:intron 40.0%
!! CCAGTTCCTAAAAGTATCTC+AGG + chr1.1:67179992-67180011 None:intergenic 40.0%
!! CCTGAGATACTTTTAGGAAC+TGG - chr1.1:67179989-67180008 MS.gene005829:CDS 40.0%
GCTTCAAGACTCATTTCGTC+GGG + chr1.1:67180559-67180578 None:intergenic 45.0%
GGAGTAGCTAAATCTCAGCA+TGG - chr1.1:67179831-67179850 MS.gene005829:CDS 45.0%
! CTCTGCATTTGGTTTCGGTT+TGG - chr1.1:67179861-67179880 MS.gene005829:intron 45.0%
! GTTAAACCTGAGTTGAAGGG+TGG + chr1.1:67180397-67180416 None:intergenic 45.0%
!! ATGGAGATTGGCTCTGCATT+TGG - chr1.1:67179850-67179869 MS.gene005829:intron 45.0%
CTCATTTCGTCGGGAACTTC+AGG + chr1.1:67180550-67180569 None:intergenic 50.0%
GGTATTCCACCCTTCAACTC+AGG - chr1.1:67180388-67180407 MS.gene005829:CDS 50.0%
GTAATCAGGTGTGCCAACAG+CGG + chr1.1:67179963-67179982 None:intergenic 50.0%
TACTTAGCTCCTGAGAACGG+AGG - chr1.1:67179914-67179933 MS.gene005829:intron 50.0%
TTGCAAGGCTACCATGACAG+TGG - chr1.1:67179810-67179829 MS.gene005829:CDS 50.0%
TTGCAGCGTATACTGCGGAT+TGG - chr1.1:67180329-67180348 MS.gene005829:intron 50.0%
AGCTCCTGAGAACGGAGGAA+GGG - chr1.1:67179919-67179938 MS.gene005829:intron 55.0%
CTGAGAACGGAGGAAGGGAA+CGG - chr1.1:67179924-67179943 MS.gene005829:intron 55.0%
TAGCTCCTGAGAACGGAGGA+AGG - chr1.1:67179918-67179937 MS.gene005829:intron 55.0%
!! ACTGCGGATTGGTGGTCTGT+TGG - chr1.1:67180340-67180359 MS.gene005829:intron 55.0%
!! AGGAAGAAGCGTTCCGCTGT+TGG - chr1.1:67179947-67179966 MS.gene005829:CDS 55.0%
!! CAGCGTATACTGCGGATTGG+TGG - chr1.1:67180332-67180351 MS.gene005829:intron 55.0%
!! CTGCGGATTGGTGGTCTGTT+GGG - chr1.1:67180341-67180360 MS.gene005829:intron 55.0%
!! TGCGGATTGGTGGTCTGTTG+GGG - chr1.1:67180342-67180361 MS.gene005829:CDS 55.0%
AGAACGGAGGAAGGGAACGG+AGG - chr1.1:67179927-67179946 MS.gene005829:intron 60.0%
CGTTCCCTTCCTCCGTTCTC+AGG + chr1.1:67179926-67179945 None:intergenic 60.0%
TCGTCGGGAACTTCAGGCCA+AGG + chr1.1:67180544-67180563 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr1.1 gene 67179758 67180600 67179758 ID=MS.gene005829
chr1.1 mRNA 67179758 67180600 67179758 ID=MS.gene005829.t1;Parent=MS.gene005829
chr1.1 exon 67180584 67180600 67180584 ID=MS.gene005829.t1.exon1;Parent=MS.gene005829.t1
chr1.1 CDS 67180584 67180600 67180584 ID=cds.MS.gene005829.t1;Parent=MS.gene005829.t1
chr1.1 exon 67180342 67180466 67180342 ID=MS.gene005829.t1.exon2;Parent=MS.gene005829.t1
chr1.1 CDS 67180342 67180466 67180342 ID=cds.MS.gene005829.t1;Parent=MS.gene005829.t1
chr1.1 exon 67179929 67180023 67179929 ID=MS.gene005829.t1.exon3;Parent=MS.gene005829.t1
chr1.1 CDS 67179929 67180023 67179929 ID=cds.MS.gene005829.t1;Parent=MS.gene005829.t1
chr1.1 exon 67179758 67179850 67179758 ID=MS.gene005829.t1.exon4;Parent=MS.gene005829.t1
chr1.1 CDS 67179758 67179850 67179758 ID=cds.MS.gene005829.t1;Parent=MS.gene005829.t1
Gene Sequence

>MS.gene005829

ATGTCATTGGTTCAATAGTAAGATTTTGGTAATGCTAATGTGTCAAACATTTTTGCAAGGCTACCATGACAGTGGAGTAGCTAAATCTCAGCATGGAGATTGGCTCTGCATTTGGTTTCGGTTTGGGCTAACAGCCGAGTGTTTTTTTCGGTTGATTACTTAGCTCCTGAGAACGGAGGAAGGGAACGGAGGAAGAAGCGTTCCGCTGTTGGCACACCTGATTACTTAGCTCCTGAGATACTTTTAGGAACTGGACATGGTTCGTATAGTCCCATTTATATGTTTAAGGTGGTTCATTTTCTGTTTTCTTTTTCATCGCTTAAAATGAAGGTTAAATTTGTCTATTACAGATTGTTTTTAGAAATGAAGTTGTTCTTAAATAAACTCGTAATGATGCTAAACAAAAATATGTAATGATTATTAGAGTGAACTAATGAAATTAAAAAACCCTTTTTGTTATTATAGTAGCCTGCTGATTTAGTGGTTTTACATTATATACTTGAAAATGTTCTCATGTATTCTTGTGTATTTTATTGCTAACATAACACCTGCAAAAATATTTGTTCAAATTTTGCAGCGTATACTGCGGATTGGTGGTCTGTTGGGGTCATTTTATTTGAGTTGCTTGTTGGTATTCCACCCTTCAACTCAGGTTTAACTTTGCTTCTTAGTGTGATGAATGTTTATATTTTTATTCTTTTGGTAGTTTCTTGAATTCTCACCACAGATTATGTAATTTTGTGTTTGTAGACTATATTTGATAATATTCTTAATCGTAAGATACCTTGGCCTGAAGTTCCCGACGAAATGAGTCTTGAAGCACATGATCTTATTGATCGGTAA
Protein sequence

>MS.gene005829.t1

MSLVQYRVFFSVDYLAPENGGRERRKKRSAVGTPDYLAPEILLGTGHAYTADWWSVGVILFELLVGIPPFNSGLTLLLSTIFDNILNRKIPWPEVPDEMSLEAHDLIDR