Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005874.t1 | XP_003591828.2 | 84 | 489 | 30 | 2 | 1 | 449 | 1 | 481 | 6.10E-219 | 770 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005874.t1 | Q6NQK2 | 48.7 | 485 | 170 | 9 | 4 | 447 | 2 | 448 | 9.1e-115 | 415.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005874.t1 | G7I498 | 84.0 | 489 | 30 | 2 | 1 | 449 | 1 | 481 | 4.4e-219 | 770.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene005874.t1 | TF | NAC |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005874.t1 | MTR_1g093680 | 85.072 | 489 | 25 | 2 | 1 | 449 | 1 | 481 | 0.0 | 847 |
| MS.gene005874.t1 | MTR_5g053430 | 60.924 | 476 | 119 | 6 | 4 | 448 | 2 | 441 | 0.0 | 558 |
| MS.gene005874.t1 | MTR_5g053430 | 61.134 | 476 | 121 | 6 | 4 | 448 | 2 | 444 | 0.0 | 557 |
| MS.gene005874.t1 | MTR_1g093670 | 60.494 | 405 | 92 | 7 | 41 | 443 | 6 | 344 | 2.68e-156 | 446 |
| MS.gene005874.t1 | MTR_7g033320 | 56.075 | 214 | 92 | 1 | 8 | 219 | 5 | 218 | 1.53e-83 | 266 |
| MS.gene005874.t1 | MTR_8g102240 | 59.162 | 191 | 68 | 4 | 36 | 218 | 27 | 215 | 8.49e-74 | 240 |
| MS.gene005874.t1 | MTR_8g102240 | 59.162 | 191 | 68 | 4 | 36 | 218 | 27 | 215 | 8.71e-74 | 240 |
| MS.gene005874.t1 | MTR_2g014680 | 53.363 | 223 | 101 | 2 | 32 | 251 | 25 | 247 | 1.49e-73 | 233 |
| MS.gene005874.t1 | MTR_4g088245 | 58.115 | 191 | 77 | 2 | 36 | 223 | 44 | 234 | 4.58e-71 | 228 |
| MS.gene005874.t1 | MTR_8g069160 | 58.333 | 180 | 72 | 2 | 36 | 212 | 44 | 223 | 1.91e-67 | 216 |
| MS.gene005874.t1 | MTR_4g078875 | 55.729 | 192 | 80 | 2 | 37 | 223 | 24 | 215 | 1.95e-67 | 217 |
| MS.gene005874.t1 | MTR_2g090735 | 57.068 | 191 | 78 | 2 | 37 | 223 | 25 | 215 | 2.98e-63 | 206 |
| MS.gene005874.t1 | MTR_4g089135 | 33.537 | 164 | 85 | 8 | 56 | 213 | 13 | 158 | 8.77e-12 | 66.6 |
| MS.gene005874.t1 | MTR_2g080010 | 34.177 | 158 | 79 | 9 | 47 | 198 | 5 | 143 | 1.14e-11 | 66.2 |
| MS.gene005874.t1 | MTR_8g059170 | 34.043 | 141 | 77 | 6 | 58 | 197 | 14 | 139 | 2.59e-11 | 65.1 |
| MS.gene005874.t1 | MTR_3g088110 | 34.722 | 144 | 73 | 7 | 58 | 198 | 7 | 132 | 4.47e-11 | 63.9 |
| MS.gene005874.t1 | MTR_1g008740 | 29.825 | 171 | 98 | 7 | 58 | 221 | 27 | 182 | 9.59e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005874.t1 | AT1G25580 | 50.513 | 487 | 158 | 12 | 4 | 447 | 2 | 448 | 8.81e-147 | 426 |
| MS.gene005874.t1 | AT3G01600 | 55.556 | 225 | 95 | 3 | 7 | 229 | 4 | 225 | 3.80e-81 | 255 |
| MS.gene005874.t1 | AT5G14490 | 49.603 | 252 | 118 | 3 | 1 | 250 | 1 | 245 | 5.32e-78 | 246 |
| MS.gene005874.t1 | AT5G14490 | 50.000 | 246 | 114 | 3 | 7 | 250 | 4 | 242 | 1.10e-77 | 246 |
| MS.gene005874.t1 | AT5G14490 | 50.000 | 246 | 114 | 3 | 7 | 250 | 4 | 242 | 1.35e-77 | 243 |
| MS.gene005874.t1 | AT5G14490 | 49.603 | 252 | 118 | 3 | 1 | 250 | 1 | 245 | 1.60e-77 | 246 |
| MS.gene005874.t1 | AT4G29230 | 58.333 | 192 | 69 | 3 | 36 | 218 | 28 | 217 | 4.86e-76 | 244 |
| MS.gene005874.t1 | AT4G29230 | 58.333 | 192 | 69 | 3 | 36 | 218 | 28 | 217 | 2.10e-75 | 244 |
| MS.gene005874.t1 | AT4G29230 | 57.812 | 192 | 69 | 3 | 36 | 218 | 28 | 216 | 1.46e-74 | 242 |
| MS.gene005874.t1 | AT1G28470 | 53.110 | 209 | 92 | 2 | 21 | 223 | 35 | 243 | 5.44e-71 | 227 |
| MS.gene005874.t1 | AT5G56620 | 54.592 | 196 | 74 | 4 | 36 | 218 | 22 | 215 | 4.06e-69 | 226 |
| MS.gene005874.t1 | AT5G56620 | 54.592 | 196 | 74 | 4 | 36 | 218 | 22 | 215 | 4.80e-69 | 225 |
| MS.gene005874.t1 | AT5G56620 | 54.592 | 196 | 74 | 4 | 36 | 218 | 22 | 215 | 7.28e-69 | 224 |
| MS.gene005874.t1 | AT4G28500 | 54.450 | 191 | 83 | 2 | 37 | 223 | 36 | 226 | 2.76e-67 | 217 |
| MS.gene005874.t1 | AT1G01720 | 36.111 | 144 | 71 | 7 | 58 | 198 | 7 | 132 | 9.29e-13 | 68.9 |
| MS.gene005874.t1 | AT1G33060 | 30.588 | 170 | 90 | 8 | 57 | 216 | 23 | 174 | 5.03e-11 | 65.5 |
| MS.gene005874.t1 | AT1G33060 | 30.588 | 170 | 90 | 8 | 57 | 216 | 23 | 174 | 5.37e-11 | 65.1 |
| MS.gene005874.t1 | AT1G02230 | 29.825 | 171 | 96 | 8 | 59 | 222 | 4 | 157 | 7.22e-11 | 63.9 |
Find 97 sgRNAs with CRISPR-Local
Find 327 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAATATGTGGTCAAGATTT+TGG | 0.149918 | 1.1:-67684904 | MS.gene005874:CDS |
| CAGTGTCAAGGTTGAGATTT+TGG | 0.158446 | 1.1:+67683479 | None:intergenic |
| ATTTATCACTACTCTTAAAA+TGG | 0.223272 | 1.1:-67685130 | MS.gene005874:CDS |
| CTTTCTGTATATGCTCATTT+AGG | 0.224428 | 1.1:-67683631 | MS.gene005874:CDS |
| CCAGCAGCAGCAAGCCAAAT+TGG | 0.225006 | 1.1:-67684677 | MS.gene005874:CDS |
| TCGATAACATGTTGACAATT+TGG | 0.240409 | 1.1:+67687273 | None:intergenic |
| CAGTGTCAGCGTCAAGATTA+AGG | 0.257120 | 1.1:+67683527 | None:intergenic |
| CCGAGGTTTCAGGAACATTT+TGG | 0.262495 | 1.1:+67684641 | None:intergenic |
| ACAGTTGCTTCCGAGGTTTC+AGG | 0.268678 | 1.1:+67684631 | None:intergenic |
| CTTTCGGCTTCCAGTATTAT+AGG | 0.275483 | 1.1:+67684933 | None:intergenic |
| TATGATGAGATTCTTGTTCT+TGG | 0.289036 | 1.1:+67684530 | None:intergenic |
| CGATAACATGTTGACAATTT+GGG | 0.296736 | 1.1:+67687274 | None:intergenic |
| CATCTGATCAAGAGATAATA+TGG | 0.323541 | 1.1:-67685209 | MS.gene005874:CDS |
| GCAATCAAAGCCTATAATAC+TGG | 0.327546 | 1.1:-67684943 | MS.gene005874:CDS |
| CTCTCCCTTATGGCTACGTC+TGG | 0.329947 | 1.1:-67688344 | None:intergenic |
| TTCTCATTGCGAGGAGGTTC+AGG | 0.331317 | 1.1:+67684571 | None:intergenic |
| TATAGGCTTTGATTGCTCTA+TGG | 0.349409 | 1.1:+67684950 | None:intergenic |
| AGGTTCAGGCGTCACGGAAT+TGG | 0.365916 | 1.1:+67684585 | None:intergenic |
| GAGGATAGGTTTAGTCCTTC+CGG | 0.373927 | 1.1:+67684861 | None:intergenic |
| AGATTCTACCAGATCTTTCT+CGG | 0.381982 | 1.1:-67683879 | MS.gene005874:CDS |
| GGTTCAGGCGTCACGGAATT+GGG | 0.400382 | 1.1:+67684586 | None:intergenic |
| GAAAAGCTGAGAAAACTAAC+TGG | 0.402325 | 1.1:-67684774 | MS.gene005874:CDS |
| CCAATTTGGCTTGCTGCTGC+TGG | 0.410429 | 1.1:+67684677 | None:intergenic |
| CAGATCTTTCTCGGTTAGAA+TGG | 0.419534 | 1.1:-67683870 | MS.gene005874:CDS |
| CGACATTCGATTAAGTCAAC+TGG | 0.441693 | 1.1:-67683428 | MS.gene005874:intron |
| TGGAACAGAAGAGGATGAAA+AGG | 0.444567 | 1.1:-67684731 | MS.gene005874:CDS |
| ATAGAAACTCAAACTAATGA+AGG | 0.445370 | 1.1:-67683793 | MS.gene005874:CDS |
| CAGCAGCAGCAAGCCAAATT+GGG | 0.449148 | 1.1:-67684676 | MS.gene005874:CDS |
| AGAATGGCTACTTGAAAGTC+AGG | 0.455673 | 1.1:-67683854 | MS.gene005874:CDS |
| TGGGGAAAACGGAGAGCAAA+TGG | 0.462093 | 1.1:-67683665 | MS.gene005874:CDS |
| TTCAGAGCCAGTCTCCGAAA+AGG | 0.466169 | 1.1:-67683690 | MS.gene005874:CDS |
| CATCCTCTTCTGTTCCAAGA+TGG | 0.472200 | 1.1:+67684737 | None:intergenic |
| TTGACAATTTGGGCAAGCTC+TGG | 0.472858 | 1.1:+67687284 | None:intergenic |
| CGTCGTGGTTGGTGGACAAA+AGG | 0.474826 | 1.1:-67687374 | MS.gene005874:CDS |
| CTAAACCTATCCTCTTGAAC+GGG | 0.489073 | 1.1:-67684852 | MS.gene005874:CDS |
| GCCAGTCTCCGAAAAGGGAT+GGG | 0.491139 | 1.1:-67683684 | MS.gene005874:CDS |
| GGAAGCAACTGTTATAAAAG+TGG | 0.494051 | 1.1:-67684620 | MS.gene005874:CDS |
| CATTCTAACCGAGAAAGATC+TGG | 0.494095 | 1.1:+67683871 | None:intergenic |
| CACAGGATAGTTACGTTGCG+TGG | 0.494301 | 1.1:-67683289 | MS.gene005874:CDS |
| ACTCATCCTCAGCGTTTACC+AGG | 0.499467 | 1.1:-67685090 | MS.gene005874:intron |
| TAAATTCATCGATGAATGGA+TGG | 0.502555 | 1.1:+67685148 | None:intergenic |
| AATTCAATAAATTCTGCGAC+AGG | 0.503431 | 1.1:+67683755 | None:intergenic |
| AATGTAGGTGTTTCGCGAGA+TGG | 0.508052 | 1.1:-67684991 | MS.gene005874:intron |
| CTGAAAGAAATCTGCGAACA+AGG | 0.508582 | 1.1:+67683708 | None:intergenic |
| GACGTCCGCTGGCACAAGAC+CGG | 0.509302 | 1.1:-67684880 | MS.gene005874:CDS |
| GTTATGCATCAATACCATCT+TGG | 0.511788 | 1.1:-67684751 | MS.gene005874:CDS |
| ATGTAGACCGTCGTGGTTGG+TGG | 0.513068 | 1.1:-67687382 | MS.gene005874:intron |
| TTAACACCTCTAGGTAATCC+AGG | 0.513694 | 1.1:+67685240 | None:intergenic |
| CCGAAAAGGGATGGGGAAAA+CGG | 0.514006 | 1.1:-67683676 | MS.gene005874:CDS |
| ACTACTCTTAAAATGGATGA+TGG | 0.516095 | 1.1:-67685123 | MS.gene005874:CDS |
| TCAGAGCCAGTCTCCGAAAA+GGG | 0.517995 | 1.1:-67683689 | MS.gene005874:CDS |
| ACAGGATAGTTACGTTGCGT+GGG | 0.526850 | 1.1:-67683288 | MS.gene005874:CDS |
| GTGATAAATTCATCGATGAA+TGG | 0.527452 | 1.1:+67685144 | None:intergenic |
| CCAAAATGTTCCTGAAACCT+CGG | 0.528119 | 1.1:-67684641 | MS.gene005874:CDS |
| ACAGAAGAGGATGAAAAGGA+TGG | 0.529217 | 1.1:-67684727 | MS.gene005874:CDS |
| TAGGTAACACAAGAGTGGCC+TGG | 0.532893 | 1.1:-67685258 | MS.gene005874:CDS |
| AGCCAGTCTCCGAAAAGGGA+TGG | 0.533326 | 1.1:-67683685 | MS.gene005874:CDS |
| CATATTATCTCTTGATCAGA+TGG | 0.535616 | 1.1:+67685210 | None:intergenic |
| TTAATAGGAATTCAGCTCAC+AGG | 0.535810 | 1.1:-67683306 | MS.gene005874:intron |
| TGGCACTTGCTTGCAAAAGT+TGG | 0.539348 | 1.1:-67685189 | MS.gene005874:CDS |
| TAGAAACTCAAACTAATGAA+GGG | 0.541977 | 1.1:-67683792 | MS.gene005874:CDS |
| AGAATCTCATCATAGTCCTC+AGG | 0.542768 | 1.1:-67684521 | MS.gene005874:intron |
| TCCTTCCGGTCTTGTGCCAG+CGG | 0.547113 | 1.1:+67684875 | None:intergenic |
| CTTTCTGAAGCCCGTTCAAG+AGG | 0.552172 | 1.1:+67684842 | None:intergenic |
| GCTCTACATTTGCAGTGTCA+AGG | 0.556566 | 1.1:+67683467 | None:intergenic |
| CTCTTGAACGGGCTTCAGAA+AGG | 0.560131 | 1.1:-67684841 | MS.gene005874:CDS |
| AAATTCATCGATGAATGGAT+GGG | 0.565244 | 1.1:+67685149 | None:intergenic |
| TGAAGCCCGTTCAAGAGGAT+AGG | 0.565498 | 1.1:+67684847 | None:intergenic |
| GTCACGGAATTGGGAGTGAC+TGG | 0.565831 | 1.1:+67684595 | None:intergenic |
| CAATTTGGGCAAGCTCTGGT+AGG | 0.567523 | 1.1:+67687288 | None:intergenic |
| GGATCAAATTTAACACCTCT+AGG | 0.573417 | 1.1:+67685231 | None:intergenic |
| TTGCTTGCAAAAGTTGGTGA+AGG | 0.575602 | 1.1:-67685183 | MS.gene005874:CDS |
| CCAGTCTCCGAAAAGGGATG+GGG | 0.581156 | 1.1:-67683683 | MS.gene005874:CDS |
| TCTCCCTTATGGCTACGTCT+GGG | 0.581507 | 1.1:-67688343 | None:intergenic |
| GAACATTGCTTCTCATTGCG+AGG | 0.584286 | 1.1:+67684562 | None:intergenic |
| ACTAAACCTATCCTCTTGAA+CGG | 0.585397 | 1.1:-67684853 | MS.gene005874:CDS |
| CTTGTATATGTAGACCGTCG+TGG | 0.591109 | 1.1:-67687389 | MS.gene005874:intron |
| CTTTATATGACTCCAGAGAG+TGG | 0.599269 | 1.1:-67684799 | MS.gene005874:CDS |
| TCCGCTGGCACAAGACCGGA+AGG | 0.600544 | 1.1:-67684876 | MS.gene005874:CDS |
| GCGAGGAGGTTCAGGCGTCA+CGG | 0.600720 | 1.1:+67684579 | None:intergenic |
| AATTCACAGCAACTTGCGGA+AGG | 0.600786 | 1.1:-67683736 | MS.gene005874:CDS |
| TGACTTAATCGAATGTCGGA+AGG | 0.609614 | 1.1:+67683433 | None:intergenic |
| CAGTTGACTTAATCGAATGT+CGG | 0.615405 | 1.1:+67683429 | None:intergenic |
| TATATGTAGACCGTCGTGGT+TGG | 0.621640 | 1.1:-67687385 | MS.gene005874:intron |
| AATTCATCGATGAATGGATG+GGG | 0.621875 | 1.1:+67685150 | None:intergenic |
| CATTGCTTCTCATTGCGAGG+AGG | 0.622091 | 1.1:+67684565 | None:intergenic |
| ATTGAATTCACAGCAACTTG+CGG | 0.627276 | 1.1:-67683740 | MS.gene005874:CDS |
| GTTGTTAGGTAACACAAGAG+TGG | 0.628897 | 1.1:-67685263 | MS.gene005874:intron |
| GATAGTTACGTTGCGTGGGG+TGG | 0.628949 | 1.1:-67683284 | MS.gene005874:CDS |
| AAAAGCTGAGAAAACTAACT+GGG | 0.630819 | 1.1:-67684773 | MS.gene005874:CDS |
| ATACCATCTTGGAACAGAAG+AGG | 0.631271 | 1.1:-67684740 | MS.gene005874:CDS |
| AGAAACTCAAACTAATGAAG+GGG | 0.644054 | 1.1:-67683791 | MS.gene005874:CDS |
| TGAGCATATACAGAAAGACT+AGG | 0.654781 | 1.1:+67683637 | None:intergenic |
| CAGGATAGTTACGTTGCGTG+GGG | 0.662213 | 1.1:-67683287 | MS.gene005874:CDS |
| GAGTGGCCTGGATTACCTAG+AGG | 0.709350 | 1.1:-67685246 | MS.gene005874:CDS |
| AGTCCACCTGGTAAACGCTG+AGG | 0.726794 | 1.1:+67685084 | None:intergenic |
| TATATGACTCCAGAGAGTGG+AGG | 0.733666 | 1.1:-67684796 | MS.gene005874:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAAAATGAATTTAATGTAA+TGG | + | chr1.1:67688222-67688241 | None:intergenic | 10.0% |
| !! | AATCATTAAGAATTATTTAG+AGG | - | chr1.1:67685675-67685694 | MS.gene005874:intron | 15.0% |
| !! | ATCAAAAAAAAATTAAGTGT+TGG | - | chr1.1:67685821-67685840 | MS.gene005874:intron | 15.0% |
| !! | GATTTAATTGGAAATTAAAA+TGG | + | chr1.1:67683535-67683554 | None:intergenic | 15.0% |
| !! | TCTATCATTATGTAAATAAT+AGG | + | chr1.1:67684866-67684885 | None:intergenic | 15.0% |
| !! | TTAAGAATTTATTTCAATGA+AGG | + | chr1.1:67687486-67687505 | None:intergenic | 15.0% |
| !! | TTAATTTCCAATTAAATCTT+TGG | - | chr1.1:67683537-67683556 | MS.gene005874:CDS | 15.0% |
| !!! | AATAAAGCAAATAATTTTGA+AGG | + | chr1.1:67683489-67683508 | None:intergenic | 15.0% |
| !!! | ATCTTTTTCTTAATTTCAAA+TGG | - | chr1.1:67683331-67683350 | MS.gene005874:intron | 15.0% |
| !!! | GAAATATGTTATTTAATTTC+TGG | - | chr1.1:67685977-67685996 | MS.gene005874:intron | 15.0% |
| !!! | GCTTGTTTTTTTTTTTTAAT+AGG | - | chr1.1:67688279-67688298 | MS.gene005874:intron | 15.0% |
| !!! | TATATATCAGTGATATTTTA+TGG | - | chr1.1:67684554-67684573 | MS.gene005874:CDS | 15.0% |
| !!! | TCTTTTTCTTAATTTCAAAT+GGG | - | chr1.1:67683332-67683351 | MS.gene005874:intron | 15.0% |
| !! | AAAACAACCAAAGATTTAAT+TGG | + | chr1.1:67683547-67683566 | None:intergenic | 20.0% |
| !! | AAAGCTGGTATTAAAAAATA+AGG | + | chr1.1:67687577-67687596 | None:intergenic | 20.0% |
| !! | AAATTAATGCACAGAATATA+TGG | + | chr1.1:67685878-67685897 | None:intergenic | 20.0% |
| !! | AAGAACAAAATTATCAACAT+AGG | + | chr1.1:67687683-67687702 | None:intergenic | 20.0% |
| !! | AATAAATTCAACTTATGATG+GGG | + | chr1.1:67685109-67685128 | None:intergenic | 20.0% |
| !! | AGTTTATTGTTCAATAGATA+TGG | - | chr1.1:67683572-67683591 | MS.gene005874:CDS | 20.0% |
| !! | ATAAGAAAATTAAGACAAGT+AGG | + | chr1.1:67684504-67684523 | None:intergenic | 20.0% |
| !! | ATTTATCACTACTCTTAAAA+TGG | - | chr1.1:67686470-67686489 | MS.gene005874:intron | 20.0% |
| !! | CAATAAATTCAACTTATGAT+GGG | + | chr1.1:67685110-67685129 | None:intergenic | 20.0% |
| !! | CTTTGAATCAAATACATTAA+AGG | - | chr1.1:67685710-67685729 | MS.gene005874:intron | 20.0% |
| !! | GCTATATGATTATAAAATGT+AGG | - | chr1.1:67686594-67686613 | MS.gene005874:intron | 20.0% |
| !! | TCAATAAATTCAACTTATGA+TGG | + | chr1.1:67685111-67685130 | None:intergenic | 20.0% |
| !!! | AAAAATGCCAATAAACTTTT+AGG | + | chr1.1:67686220-67686239 | None:intergenic | 20.0% |
| !!! | AAGTTGATATTTATTTGATG+TGG | - | chr1.1:67687426-67687445 | MS.gene005874:intron | 20.0% |
| !!! | AATGAATTTAATGTAATGGA+AGG | + | chr1.1:67688218-67688237 | None:intergenic | 20.0% |
| !!! | AATTAAGTGTTGGAAAAAAA+AGG | - | chr1.1:67685831-67685850 | MS.gene005874:intron | 20.0% |
| !!! | GTGTTTAAATTTGATAGTTT+TGG | - | chr1.1:67687623-67687642 | MS.gene005874:intron | 20.0% |
| !!! | TATGTTATTTAATTTCTGGA+AGG | - | chr1.1:67685981-67686000 | MS.gene005874:intron | 20.0% |
| !!! | TCATTATTTGAGTTTAATAG+TGG | - | chr1.1:67683452-67683471 | MS.gene005874:CDS | 20.0% |
| !!! | TGCTTTATTTATTATAGAGA+AGG | - | chr1.1:67683422-67683441 | MS.gene005874:intron | 20.0% |
| !!! | TGTTGATCAAAGTTTTTATA+TGG | - | chr1.1:67683606-67683625 | MS.gene005874:CDS | 20.0% |
| !!! | TTCCAAATATTTAATTTACC+CGG | - | chr1.1:67687348-67687367 | MS.gene005874:CDS | 20.0% |
| !!! | TTTCAAAGTTTTATGTTGTT+AGG | - | chr1.1:67686323-67686342 | MS.gene005874:intron | 20.0% |
| ! | AACCGGGTAAATTAAATATT+TGG | + | chr1.1:67687353-67687372 | None:intergenic | 25.0% |
| ! | ACTATATACAAGACATCAAT+CGG | - | chr1.1:67686069-67686088 | MS.gene005874:intron | 25.0% |
| ! | AGTATCACTGTTATAAAAAC+AGG | + | chr1.1:67686167-67686186 | None:intergenic | 25.0% |
| ! | ATAGAAACTCAAACTAATGA+AGG | - | chr1.1:67687807-67687826 | MS.gene005874:intron | 25.0% |
| ! | ATCAGCATAATTCATTAAAC+CGG | + | chr1.1:67687370-67687389 | None:intergenic | 25.0% |
| ! | ATGAGAAAGTAATTGATTGT+TGG | - | chr1.1:67685774-67685793 | MS.gene005874:intron | 25.0% |
| ! | ATGTAGAAGTAAAACATGTT+TGG | + | chr1.1:67683979-67683998 | None:intergenic | 25.0% |
| ! | ATTTGTATCGTTCAATTTCT+TGG | - | chr1.1:67685919-67685938 | MS.gene005874:intron | 25.0% |
| ! | CAATTACTTTCTCATTCATA+GGG | + | chr1.1:67685769-67685788 | None:intergenic | 25.0% |
| ! | CATCACAAATAGAGAAAATT+TGG | + | chr1.1:67688255-67688274 | None:intergenic | 25.0% |
| ! | CATTATAGTAGATTCAACTA+AGG | + | chr1.1:67684664-67684683 | None:intergenic | 25.0% |
| ! | CATTGGTAAAACTAATCAAA+GGG | + | chr1.1:67684076-67684095 | None:intergenic | 25.0% |
| ! | CTATAATGAAAGAAAAAGTG+AGG | - | chr1.1:67684676-67684695 | MS.gene005874:CDS | 25.0% |
| ! | CTATTGATCTATCACTTATT+TGG | + | chr1.1:67685618-67685637 | None:intergenic | 25.0% |
| ! | GTATCACTGTTATAAAAACA+GGG | + | chr1.1:67686166-67686185 | None:intergenic | 25.0% |
| ! | TAAAGAAATTCAAAAAAGCG+AGG | + | chr1.1:67683381-67683400 | None:intergenic | 25.0% |
| ! | TAGAAACTCAAACTAATGAA+GGG | - | chr1.1:67687808-67687827 | MS.gene005874:intron | 25.0% |
| ! | TATCGTGTATTACATCAAAT+GGG | + | chr1.1:67685538-67685557 | None:intergenic | 25.0% |
| ! | TCAATTACTTTCTCATTCAT+AGG | + | chr1.1:67685770-67685789 | None:intergenic | 25.0% |
| ! | TTAGAAATCTCATAATCAGA+AGG | + | chr1.1:67683948-67683967 | None:intergenic | 25.0% |
| ! | TTGATATTTATTTGATGTGG+TGG | - | chr1.1:67687429-67687448 | MS.gene005874:intron | 25.0% |
| ! | TTTGTATCGTTCAATTTCTT+GGG | - | chr1.1:67685920-67685939 | MS.gene005874:intron | 25.0% |
| !! | AAAATATGTGGTCAAGATTT+TGG | - | chr1.1:67686696-67686715 | MS.gene005874:intron | 25.0% |
| !! | AACTAGAAAAAGTGTAGATT+AGG | - | chr1.1:67684638-67684657 | MS.gene005874:CDS | 25.0% |
| !! | AATCTCTTTTATCCAACATT+TGG | + | chr1.1:67685430-67685449 | None:intergenic | 25.0% |
| !! | ATTTCGTCTAAAATCACATT+AGG | - | chr1.1:67685894-67685913 | MS.gene005874:intron | 25.0% |
| !! | CTTTATTTAATGTCCAACAA+TGG | - | chr1.1:67683502-67683521 | MS.gene005874:CDS | 25.0% |
| !! | TGATCAAAGTTTTTATATGG+CGG | - | chr1.1:67683609-67683628 | MS.gene005874:CDS | 25.0% |
| !! | TTATTTAATTTCTGGAAGGA+AGG | - | chr1.1:67685985-67686004 | MS.gene005874:intron | 25.0% |
| !!! | AACACTTTTTTCCTTCTAAA+TGG | - | chr1.1:67685496-67685515 | MS.gene005874:intron | 25.0% |
| !!! | AACGTTTTAAGCATTTAATG+TGG | - | chr1.1:67687236-67687255 | MS.gene005874:intron | 25.0% |
| !!! | AAGCTTTATTCAAATTTGGA+TGG | - | chr1.1:67686543-67686562 | MS.gene005874:intron | 25.0% |
| !!! | ACACTTTTTTCCTTCTAAAT+GGG | - | chr1.1:67685497-67685516 | MS.gene005874:intron | 25.0% |
| !!! | ATAATTGTTTTAGAACCATG+GGG | + | chr1.1:67685293-67685312 | None:intergenic | 25.0% |
| !!! | ATTATGCTGATTTGATTAGA+AGG | - | chr1.1:67687379-67687398 | MS.gene005874:CDS | 25.0% |
| !!! | GATAATTGTTTTAGAACCAT+GGG | + | chr1.1:67685294-67685313 | None:intergenic | 25.0% |
| !!! | GTCTAAGCTTTATTCAAATT+TGG | - | chr1.1:67686539-67686558 | MS.gene005874:intron | 25.0% |
| !!! | TGTATGTTTTCCTTTGTTTT+TGG | - | chr1.1:67687131-67687150 | MS.gene005874:intron | 25.0% |
| !!! | TTTTAATACCAGCTTTGAAT+GGG | - | chr1.1:67687581-67687600 | MS.gene005874:intron | 25.0% |
| !!! | TTTTTAATACCAGCTTTGAA+TGG | - | chr1.1:67687580-67687599 | MS.gene005874:intron | 25.0% |
| AAAAGCTGAGAAAACTAACT+GGG | - | chr1.1:67686827-67686846 | MS.gene005874:intron | 30.0% | |
| AAATTCATCGATGAATGGAT+GGG | + | chr1.1:67686454-67686473 | None:intergenic | 30.0% | |
| AAGAGATTGCACAAACAATT+AGG | - | chr1.1:67685442-67685461 | MS.gene005874:intron | 30.0% | |
| AAGCAACCGAAAAAGTTATA+TGG | - | chr1.1:67684280-67684299 | MS.gene005874:intron | 30.0% | |
| AATTCAATAAATTCTGCGAC+AGG | + | chr1.1:67687848-67687867 | None:intergenic | 30.0% | |
| ACTACTCTTAAAATGGATGA+TGG | - | chr1.1:67686477-67686496 | MS.gene005874:intron | 30.0% | |
| ACTGTTGATACTAAAGTAAG+AGG | + | chr1.1:67683302-67683321 | None:intergenic | 30.0% | |
| AGAAACTCAAACTAATGAAG+GGG | - | chr1.1:67687809-67687828 | MS.gene005874:intron | 30.0% | |
| AGATCAATAGTTAGAGATAG+AGG | - | chr1.1:67685628-67685647 | MS.gene005874:intron | 30.0% | |
| AGATGTTAAACTCATAATGC+TGG | - | chr1.1:67687286-67687305 | MS.gene005874:CDS | 30.0% | |
| AGCAACCGAAAAAGTTATAT+GGG | - | chr1.1:67684281-67684300 | MS.gene005874:intron | 30.0% | |
| AGTTACAATAAGAAACTGCA+TGG | + | chr1.1:67686035-67686054 | None:intergenic | 30.0% | |
| ATAAGAAACTGCATGGAAAT+AGG | + | chr1.1:67686028-67686047 | None:intergenic | 30.0% | |
| ATAAGAGTTCCACTATTACA+AGG | + | chr1.1:67684130-67684149 | None:intergenic | 30.0% | |
| ATACAACACGAAAATGTTAG+TGG | + | chr1.1:67687116-67687135 | None:intergenic | 30.0% | |
| ATTTATTTCAATGAAGGCAG+CGG | + | chr1.1:67687480-67687499 | None:intergenic | 30.0% | |
| CACTTAATCCTCTTTAAGTA+GGG | - | chr1.1:67684828-67684847 | MS.gene005874:CDS | 30.0% | |
| CATATTATCTCTTGATCAGA+TGG | + | chr1.1:67686393-67686412 | None:intergenic | 30.0% | |
| CATCTGATCAAGAGATAATA+TGG | - | chr1.1:67686391-67686410 | MS.gene005874:intron | 30.0% | |
| CCATTGGTAAAACTAATCAA+AGG | + | chr1.1:67684077-67684096 | None:intergenic | 30.0% | |
| CGATAACATGTTGACAATTT+GGG | + | chr1.1:67684329-67684348 | None:intergenic | 30.0% | |
| CTATCGTGTATTACATCAAA+TGG | + | chr1.1:67685539-67685558 | None:intergenic | 30.0% | |
| CTTTCTGTATATGCTCATTT+AGG | - | chr1.1:67687969-67687988 | MS.gene005874:intron | 30.0% | |
| GAAAGGCTGTAAAAAGATTA+TGG | - | chr1.1:67686776-67686795 | MS.gene005874:intron | 30.0% | |
| GATCAATAGTTAGAGATAGA+GGG | - | chr1.1:67685629-67685648 | MS.gene005874:intron | 30.0% | |
| GATTGATGTCTTGTATATAG+TGG | + | chr1.1:67686070-67686089 | None:intergenic | 30.0% | |
| GTGATAAATTCATCGATGAA+TGG | + | chr1.1:67686459-67686478 | None:intergenic | 30.0% | |
| TAAATTCATCGATGAATGGA+TGG | + | chr1.1:67686455-67686474 | None:intergenic | 30.0% | |
| TACCTGTCCTAAAAGTTTAT+TGG | - | chr1.1:67686210-67686229 | MS.gene005874:intron | 30.0% | |
| TATCTGTGACTTCAGATATA+AGG | + | chr1.1:67686192-67686211 | None:intergenic | 30.0% | |
| TATGATGAGATTCTTGTTCT+TGG | + | chr1.1:67687073-67687092 | None:intergenic | 30.0% | |
| TCAGCATAATTCATTAAACC+GGG | + | chr1.1:67687369-67687388 | None:intergenic | 30.0% | |
| TCGATAACATGTTGACAATT+TGG | + | chr1.1:67684330-67684349 | None:intergenic | 30.0% | |
| TCTGACACAATATTCATTTG+TGG | - | chr1.1:67687319-67687338 | MS.gene005874:CDS | 30.0% | |
| TGCTTTCAATTGTATTTCAG+TGG | - | chr1.1:67684388-67684407 | MS.gene005874:intron | 30.0% | |
| TGTTCAATAGATATGGCTTT+CGG | - | chr1.1:67683579-67683598 | MS.gene005874:CDS | 30.0% | |
| TTGGTTGACATATTACACAA+TGG | - | chr1.1:67685793-67685812 | MS.gene005874:intron | 30.0% | |
| TTGTATCGTTCAATTTCTTG+GGG | - | chr1.1:67685921-67685940 | MS.gene005874:intron | 30.0% | |
| ! | AATAGATTCAGGAATTTTCC+TGG | + | chr1.1:67685149-67685168 | None:intergenic | 30.0% |
| ! | AGTGTTGGAAAAAAAAGGAA+CGG | - | chr1.1:67685836-67685855 | MS.gene005874:intron | 30.0% |
| ! | GCTTTCCCATATAACTTTTT+CGG | + | chr1.1:67684289-67684308 | None:intergenic | 30.0% |
| ! | TGTACTGTATAGTTTAGCTT+AGG | - | chr1.1:67687529-67687548 | MS.gene005874:intron | 30.0% |
| !! | GAATAAACTTTGAGATGAAG+TGG | + | chr1.1:67685255-67685274 | None:intergenic | 30.0% |
| !! | TAGAAGGAAAAAAGTGTTTC+TGG | + | chr1.1:67685494-67685513 | None:intergenic | 30.0% |
| !! | TAGATTTTAATGTCGCATCA+TGG | + | chr1.1:67683721-67683740 | None:intergenic | 30.0% |
| !!! | CCTTTGATTAGTTTTACCAA+TGG | - | chr1.1:67684074-67684093 | MS.gene005874:intron | 30.0% |
| !!! | GGATAATTGTTTTAGAACCA+TGG | + | chr1.1:67685295-67685314 | None:intergenic | 30.0% |
| !!! | TTGATTAGTTTTACCAATGG+TGG | - | chr1.1:67684077-67684096 | MS.gene005874:intron | 30.0% |
| !!! | TTTCCTTTGTTTTTGGAAGA+GGG | - | chr1.1:67687138-67687157 | MS.gene005874:intron | 30.0% |
| !!! | TTTTCCTTTGTTTTTGGAAG+AGG | - | chr1.1:67687137-67687156 | MS.gene005874:intron | 30.0% |
| AAAGAAAAAGTGAGGTCTCT+TGG | - | chr1.1:67684684-67684703 | MS.gene005874:CDS | 35.0% | |
| AAATCTAGATGTCTTGACCT+AGG | - | chr1.1:67683734-67683753 | MS.gene005874:CDS | 35.0% | |
| AAATGGATGATCACCATTGT+TGG | + | chr1.1:67683518-67683537 | None:intergenic | 35.0% | |
| AAGTAGGAAACTAGACATGA+AGG | + | chr1.1:67684488-67684507 | None:intergenic | 35.0% | |
| AATTCATCGATGAATGGATG+GGG | + | chr1.1:67686453-67686472 | None:intergenic | 35.0% | |
| ACTAAACCTATCCTCTTGAA+CGG | - | chr1.1:67686747-67686766 | MS.gene005874:intron | 35.0% | |
| AGAATTTCGTCCTATGTGAT+GGG | - | chr1.1:67685559-67685578 | MS.gene005874:intron | 35.0% | |
| AGATTCTACCAGATCTTTCT+CGG | - | chr1.1:67687721-67687740 | MS.gene005874:intron | 35.0% | |
| AGTAGTATGACTGGGATAAT+AGG | + | chr1.1:67684774-67684793 | None:intergenic | 35.0% | |
| AGTGTCTACAATTGGAACAA+AGG | + | chr1.1:67684035-67684054 | None:intergenic | 35.0% | |
| ATAAACTGGAGCACGAAAAA+AGG | + | chr1.1:67685082-67685101 | None:intergenic | 35.0% | |
| ATATACAAGACATCAATCGG+TGG | - | chr1.1:67686072-67686091 | MS.gene005874:intron | 35.0% | |
| ATTATATGTGTGCCGTGTTA+TGG | + | chr1.1:67685216-67685235 | None:intergenic | 35.0% | |
| ATTGAATTCACAGCAACTTG+CGG | - | chr1.1:67687860-67687879 | MS.gene005874:intron | 35.0% | |
| CCAATATCCATGTACATGTA+AGG | + | chr1.1:67686108-67686127 | None:intergenic | 35.0% | |
| CCACTTAATCCTCTTTAAGT+AGG | - | chr1.1:67684827-67684846 | MS.gene005874:CDS | 35.0% | |
| CCTACTTAAAGAGGATTAAG+TGG | + | chr1.1:67684830-67684849 | None:intergenic | 35.0% | |
| CCTCTTTAAGTAGGGATTTA+AGG | - | chr1.1:67684836-67684855 | MS.gene005874:CDS | 35.0% | |
| CCTTAAATCCCTACTTAAAG+AGG | + | chr1.1:67684839-67684858 | None:intergenic | 35.0% | |
| CCTTACATGTACATGGATAT+TGG | - | chr1.1:67686105-67686124 | MS.gene005874:intron | 35.0% | |
| CGATATAGTTATCTAGATCG+CGG | - | chr1.1:67683766-67683785 | MS.gene005874:CDS | 35.0% | |
| CGCAAAATCGCATATAATCA+AGG | + | chr1.1:67687187-67687206 | None:intergenic | 35.0% | |
| CTCAAATAAAAAGCCACCAT+TGG | + | chr1.1:67684093-67684112 | None:intergenic | 35.0% | |
| CTTATCTCAGTGTCTACAAT+TGG | + | chr1.1:67684043-67684062 | None:intergenic | 35.0% | |
| GAAAAGCTGAGAAAACTAAC+TGG | - | chr1.1:67686826-67686845 | MS.gene005874:intron | 35.0% | |
| GAAACAAGGTAGATTACAAG+GGG | + | chr1.1:67684890-67684909 | None:intergenic | 35.0% | |
| GCAATCAAAGCCTATAATAC+TGG | - | chr1.1:67686657-67686676 | MS.gene005874:intron | 35.0% | |
| GCAGAAATCTCAATAGATTC+AGG | + | chr1.1:67685160-67685179 | None:intergenic | 35.0% | |
| GGAAACAAGGTAGATTACAA+GGG | + | chr1.1:67684891-67684910 | None:intergenic | 35.0% | |
| GGAACTGATGTGTAAGTTTA+TGG | + | chr1.1:67685346-67685365 | None:intergenic | 35.0% | |
| GGAAGCAACTGTTATAAAAG+TGG | - | chr1.1:67686980-67686999 | MS.gene005874:intron | 35.0% | |
| GGATCAAATTTAACACCTCT+AGG | + | chr1.1:67686372-67686391 | None:intergenic | 35.0% | |
| GGGATAATAGGTATGCATTT+GGG | + | chr1.1:67684762-67684781 | None:intergenic | 35.0% | |
| GTTAAACTCATAATGCTGGT+TGG | - | chr1.1:67687290-67687309 | MS.gene005874:CDS | 35.0% | |
| GTTAGAGGAACTTTCATCTT+CGG | - | chr1.1:67685004-67685023 | MS.gene005874:intron | 35.0% | |
| GTTATGCATCAATACCATCT+TGG | - | chr1.1:67686849-67686868 | MS.gene005874:intron | 35.0% | |
| GTTTGAGCAAATTGGAAACA+AGG | + | chr1.1:67684904-67684923 | None:intergenic | 35.0% | |
| TACAGATAACCAAGAGTGAT+TGG | + | chr1.1:67687513-67687532 | None:intergenic | 35.0% | |
| TACTTTCTCATTCATAGGGT+TGG | + | chr1.1:67685765-67685784 | None:intergenic | 35.0% | |
| TATACAAGACATCAATCGGT+GGG | - | chr1.1:67686073-67686092 | MS.gene005874:intron | 35.0% | |
| TCTTCGATTCAGTTATGACT+GGG | + | chr1.1:67685316-67685335 | None:intergenic | 35.0% | |
| TGAGCATATACAGAAAGACT+AGG | + | chr1.1:67687966-67687985 | None:intergenic | 35.0% | |
| TGGAAACAAGGTAGATTACA+AGG | + | chr1.1:67684892-67684911 | None:intergenic | 35.0% | |
| TGGAAGGTCATTGAAAAAGT+AGG | + | chr1.1:67688202-67688221 | None:intergenic | 35.0% | |
| TGGGATAATAGGTATGCATT+TGG | + | chr1.1:67684763-67684782 | None:intergenic | 35.0% | |
| TGTATCGTTCAATTTCTTGG+GGG | - | chr1.1:67685922-67685941 | MS.gene005874:intron | 35.0% | |
| TTAATAGGAATTCAGCTCAC+AGG | - | chr1.1:67688294-67688313 | MS.gene005874:intron | 35.0% | |
| TTATATGTGTGCCGTGTTAT+GGG | + | chr1.1:67685215-67685234 | None:intergenic | 35.0% | |
| TTCTTCGATTCAGTTATGAC+TGG | + | chr1.1:67685317-67685336 | None:intergenic | 35.0% | |
| TTGTGCTATCCTTGTAATAG+TGG | - | chr1.1:67684118-67684137 | MS.gene005874:intron | 35.0% | |
| ! | AGTGGAAATGATTTTACCTG+AGG | + | chr1.1:67687098-67687117 | None:intergenic | 35.0% |
| ! | ATAGTCGACGAGTCAATTTT+TGG | + | chr1.1:67687789-67687808 | None:intergenic | 35.0% |
| ! | CAGTTGACTTAATCGAATGT+CGG | + | chr1.1:67688174-67688193 | None:intergenic | 35.0% |
| ! | TATAGGCTTTGATTGCTCTA+TGG | + | chr1.1:67686653-67686672 | None:intergenic | 35.0% |
| ! | TATGATGGGGATGAATAAAC+TGG | + | chr1.1:67685096-67685115 | None:intergenic | 35.0% |
| ! | TGTTGATAAGCCCATTTAGA+AGG | + | chr1.1:67685510-67685529 | None:intergenic | 35.0% |
| ! | TTTTATAACAGTTGCTTCCG+AGG | + | chr1.1:67686979-67686998 | None:intergenic | 35.0% |
| !! | AAGGAAAAAAGTGTTTCTGG+AGG | + | chr1.1:67685491-67685510 | None:intergenic | 35.0% |
| !! | AATGGGTTTTGCTTCTTTCA+TGG | - | chr1.1:67683349-67683368 | MS.gene005874:intron | 35.0% |
| !! | CACATATTTTTCGACGCTTT+CGG | + | chr1.1:67686686-67686705 | None:intergenic | 35.0% |
| !! | GTCATCTTTTTCACCCAATT+TGG | + | chr1.1:67686940-67686959 | None:intergenic | 35.0% |
| !!! | TGCCAATAAACTTTTAGGAC+AGG | + | chr1.1:67686215-67686234 | None:intergenic | 35.0% |
| !!! | TTGATAGTTTTGGTTCGTGA+TGG | - | chr1.1:67687633-67687652 | MS.gene005874:intron | 35.0% |
| AAAAGGAACGGAAATGCAGT+AGG | - | chr1.1:67685848-67685867 | MS.gene005874:intron | 40.0% | |
| AACATGTGTAGATGTGGTTG+TGG | + | chr1.1:67684987-67685006 | None:intergenic | 40.0% | |
| ACACCCTCTTCCAAAAACAA+AGG | + | chr1.1:67687144-67687163 | None:intergenic | 40.0% | |
| ACAGAAGAGGATGAAAAGGA+TGG | - | chr1.1:67686873-67686892 | MS.gene005874:intron | 40.0% | |
| ACATGTGTAGATGTGGTTGT+GGG | + | chr1.1:67684986-67685005 | None:intergenic | 40.0% | |
| ACCACATCTACACATGTTAG+AGG | - | chr1.1:67684989-67685008 | MS.gene005874:intron | 40.0% | |
| ACGAAAAAAGGCAGTACAGA+GGG | + | chr1.1:67685070-67685089 | None:intergenic | 40.0% | |
| AGAATCTCATCATAGTCCTC+AGG | - | chr1.1:67687079-67687098 | MS.gene005874:intron | 40.0% | |
| AGAATGGCTACTTGAAAGTC+AGG | - | chr1.1:67687746-67687765 | MS.gene005874:intron | 40.0% | |
| AGACTAGAGAGTAGTATGAC+TGG | + | chr1.1:67684783-67684802 | None:intergenic | 40.0% | |
| AGAGGATTAAGTGGAGTACA+TGG | + | chr1.1:67684821-67684840 | None:intergenic | 40.0% | |
| ATACCATCTTGGAACAGAAG+AGG | - | chr1.1:67686860-67686879 | MS.gene005874:intron | 40.0% | |
| ATATGGCGGCAATCACATTA+GGG | - | chr1.1:67683623-67683642 | MS.gene005874:CDS | 40.0% | |
| ATATTGCATTTGTGCGTGTC+AGG | - | chr1.1:67684430-67684449 | MS.gene005874:intron | 40.0% | |
| CAACAGTTTGGACCAAATGT+TGG | - | chr1.1:67685415-67685434 | MS.gene005874:intron | 40.0% | |
| CAAGAAGGGACTCAATTAGA+TGG | + | chr1.1:67685384-67685403 | None:intergenic | 40.0% | |
| CAATTGGAACAAAGGAACCA+AGG | + | chr1.1:67684027-67684046 | None:intergenic | 40.0% | |
| CAGATCTTTCTCGGTTAGAA+TGG | - | chr1.1:67687730-67687749 | MS.gene005874:intron | 40.0% | |
| CATTCTAACCGAGAAAGATC+TGG | + | chr1.1:67687732-67687751 | None:intergenic | 40.0% | |
| CCAAAATGTTCCTGAAACCT+CGG | - | chr1.1:67686959-67686978 | MS.gene005874:intron | 40.0% | |
| CGACATTCGATTAAGTCAAC+TGG | - | chr1.1:67688172-67688191 | MS.gene005874:intron | 40.0% | |
| CTAAACCTATCCTCTTGAAC+GGG | - | chr1.1:67686748-67686767 | MS.gene005874:intron | 40.0% | |
| CTGAAAGAAATCTGCGAACA+AGG | + | chr1.1:67687895-67687914 | None:intergenic | 40.0% | |
| CTTAACCTTCCAATCACTCT+TGG | - | chr1.1:67687501-67687520 | MS.gene005874:intron | 40.0% | |
| CTTCATCCATTCCCATAACA+CGG | - | chr1.1:67685201-67685220 | MS.gene005874:CDS | 40.0% | |
| CTTTATATGACTCCAGAGAG+TGG | - | chr1.1:67686801-67686820 | MS.gene005874:intron | 40.0% | |
| CTTTCGGCTTCCAGTATTAT+AGG | + | chr1.1:67686670-67686689 | None:intergenic | 40.0% | |
| GAAATATCGGTAAGGAGAGT+AGG | - | chr1.1:67685592-67685611 | MS.gene005874:intron | 40.0% | |
| GAAGTGGACGATTTATAGCT+TGG | + | chr1.1:67685239-67685258 | None:intergenic | 40.0% | |
| GACCTGTAGAAATATCGGTA+AGG | - | chr1.1:67685584-67685603 | MS.gene005874:intron | 40.0% | |
| GACTAGAGAGTAGTATGACT+GGG | + | chr1.1:67684782-67684801 | None:intergenic | 40.0% | |
| GAGAATTTCGTCCTATGTGA+TGG | - | chr1.1:67685558-67685577 | MS.gene005874:intron | 40.0% | |
| GAGGATTAAGTGGAGTACAT+GGG | + | chr1.1:67684820-67684839 | None:intergenic | 40.0% | |
| GATAACCAAGAGTGATTGGA+AGG | + | chr1.1:67687509-67687528 | None:intergenic | 40.0% | |
| GCATTCACCTTACATGTACA+TGG | - | chr1.1:67686098-67686117 | MS.gene005874:intron | 40.0% | |
| GGGAAGACCTGTAGAAATAT+CGG | - | chr1.1:67685579-67685598 | MS.gene005874:intron | 40.0% | |
| GTTGTTAGGTAACACAAGAG+TGG | - | chr1.1:67686337-67686356 | MS.gene005874:intron | 40.0% | |
| TAATCACTCCCATTCAAAGC+TGG | + | chr1.1:67687592-67687611 | None:intergenic | 40.0% | |
| TAGGAAACTAGACATGAAGG+AGG | + | chr1.1:67684485-67684504 | None:intergenic | 40.0% | |
| TATATGGCGGCAATCACATT+AGG | - | chr1.1:67683622-67683641 | MS.gene005874:CDS | 40.0% | |
| TATCTTATTCGTGTCGTCCT+TGG | - | chr1.1:67684007-67684026 | MS.gene005874:intron | 40.0% | |
| TATTGGCGATCTCAAATGCT+TGG | - | chr1.1:67686122-67686141 | MS.gene005874:intron | 40.0% | |
| TCCTCTAACATGTGTAGATG+TGG | + | chr1.1:67684993-67685012 | None:intergenic | 40.0% | |
| TCTCATCTGTGATTCTGATC+AGG | - | chr1.1:67684720-67684739 | MS.gene005874:CDS | 40.0% | |
| TGACTTAATCGAATGTCGGA+AGG | + | chr1.1:67688170-67688189 | None:intergenic | 40.0% | |
| TGCGTGTCAGGTTTATTTCA+TGG | - | chr1.1:67684442-67684461 | MS.gene005874:intron | 40.0% | |
| TGGAACAGAAGAGGATGAAA+AGG | - | chr1.1:67686869-67686888 | MS.gene005874:intron | 40.0% | |
| TTAACACCTCTAGGTAATCC+AGG | + | chr1.1:67686363-67686382 | None:intergenic | 40.0% | |
| TTAAGTGGAGTACATGGGAA+TGG | + | chr1.1:67684815-67684834 | None:intergenic | 40.0% | |
| ! | CAGTGTCAAGGTTGAGATTT+TGG | + | chr1.1:67688124-67688143 | None:intergenic | 40.0% |
| ! | CTAATCGACTGCAATTTGCT+CGG | + | chr1.1:67683674-67683693 | None:intergenic | 40.0% |
| ! | CTCCTTACCGATATTTCTAC+AGG | + | chr1.1:67685589-67685608 | None:intergenic | 40.0% |
| ! | CTGCAATTTGCTCGGTATTA+AGG | + | chr1.1:67683666-67683685 | None:intergenic | 40.0% |
| ! | TGCATGCTGTTTGAGCAAAT+TGG | + | chr1.1:67684912-67684931 | None:intergenic | 40.0% |
| ! | TTTTAATGTCGCATCATGGC+TGG | + | chr1.1:67683717-67683736 | None:intergenic | 40.0% |
| !! | CGAAAGCGTCGAAAAATATG+TGG | - | chr1.1:67686684-67686703 | MS.gene005874:intron | 40.0% |
| !! | TTGCTTGCAAAAGTTGGTGA+AGG | - | chr1.1:67686417-67686436 | MS.gene005874:intron | 40.0% |
| AATGTAGGTGTTTCGCGAGA+TGG | - | chr1.1:67686609-67686628 | MS.gene005874:intron | 45.0% | |
| AATTCACAGCAACTTGCGGA+AGG | - | chr1.1:67687864-67687883 | MS.gene005874:intron | 45.0% | |
| ACAGGATAGTTACGTTGCGT+GGG | - | chr1.1:67688312-67688331 | MS.gene005874:intron | 45.0% | |
| ACCAAGTTGTGAAGCGATTG+TGG | + | chr1.1:67683850-67683869 | None:intergenic | 45.0% | |
| ACTAGACATGAAGGAGGTTG+AGG | + | chr1.1:67684479-67684498 | None:intergenic | 45.0% | |
| AGATTTCTTAGTCTGCCCCA+TGG | - | chr1.1:67685275-67685294 | MS.gene005874:intron | 45.0% | |
| ATGGGAATGGATGAAGCAGA+AGG | + | chr1.1:67685197-67685216 | None:intergenic | 45.0% | |
| ATTGAGTCCCTTCTTGTCGA+CGG | - | chr1.1:67685388-67685407 | MS.gene005874:intron | 45.0% | |
| CACGAAAAAAGGCAGTACAG+AGG | + | chr1.1:67685071-67685090 | None:intergenic | 45.0% | |
| CAGTGTCAGCGTCAAGATTA+AGG | + | chr1.1:67688076-67688095 | None:intergenic | 45.0% | |
| CATCCTCTTCTGTTCCAAGA+TGG | + | chr1.1:67686866-67686885 | None:intergenic | 45.0% | |
| CGAGCAAATTGCAGTCGATT+AGG | - | chr1.1:67683672-67683691 | MS.gene005874:CDS | 45.0% | |
| CTATATCGCAATCACGACCT+AGG | + | chr1.1:67683754-67683773 | None:intergenic | 45.0% | |
| CTTGTATATGTAGACCGTCG+TGG | - | chr1.1:67684211-67684230 | MS.gene005874:intron | 45.0% | |
| GAACATTGCTTCTCATTGCG+AGG | + | chr1.1:67687041-67687060 | None:intergenic | 45.0% | |
| GAGGATAGGTTTAGTCCTTC+CGG | + | chr1.1:67686742-67686761 | None:intergenic | 45.0% | |
| GCAGTCGATTAGGTATGATG+TGG | - | chr1.1:67683682-67683701 | MS.gene005874:CDS | 45.0% | |
| GCTCTACATTTGCAGTGTCA+AGG | + | chr1.1:67688136-67688155 | None:intergenic | 45.0% | |
| TAAAGCTTAGACAGTCCACC+TGG | + | chr1.1:67686531-67686550 | None:intergenic | 45.0% | |
| TACAGGTCTTCCCATCACAT+AGG | + | chr1.1:67685572-67685591 | None:intergenic | 45.0% | |
| TATATGACTCCAGAGAGTGG+AGG | - | chr1.1:67686804-67686823 | MS.gene005874:intron | 45.0% | |
| TATATGTAGACCGTCGTGGT+TGG | - | chr1.1:67684215-67684234 | MS.gene005874:intron | 45.0% | |
| TGGCACTTGCTTGCAAAAGT+TGG | - | chr1.1:67686411-67686430 | MS.gene005874:intron | 45.0% | |
| TGGTTCGTGATGGTAGTTTG+TGG | - | chr1.1:67687643-67687662 | MS.gene005874:intron | 45.0% | |
| TTGAATGCCGTCGACAAGAA+GGG | + | chr1.1:67685398-67685417 | None:intergenic | 45.0% | |
| TTGACAATTTGGGCAAGCTC+TGG | + | chr1.1:67684319-67684338 | None:intergenic | 45.0% | |
| ! | CCGAGGTTTCAGGAACATTT+TGG | + | chr1.1:67686962-67686981 | None:intergenic | 45.0% |
| ! | TGAGATTTTCACAACGTGCC+AGG | - | chr1.1:67685128-67685147 | MS.gene005874:CDS | 45.0% |
| !! | CATTCATAGGGTTGGCTACA+TGG | + | chr1.1:67685757-67685776 | None:intergenic | 45.0% |
| ACAGTTGCTTCCGAGGTTTC+AGG | + | chr1.1:67686972-67686991 | None:intergenic | 50.0% | |
| ACTCATCCTCAGCGTTTACC+AGG | - | chr1.1:67686510-67686529 | MS.gene005874:intron | 50.0% | |
| AGCGGCAAACATGCATCTGT+TGG | + | chr1.1:67687462-67687481 | None:intergenic | 50.0% | |
| ATGTGGTTGTGGGTCTGTCT+TGG | + | chr1.1:67684976-67684995 | None:intergenic | 50.0% | |
| CACAGGATAGTTACGTTGCG+TGG | - | chr1.1:67688311-67688330 | MS.gene005874:intron | 50.0% | |
| CAGCAGCAGCAAGCCAAATT+GGG | - | chr1.1:67686924-67686943 | MS.gene005874:intron | 50.0% | |
| CAGGATAGTTACGTTGCGTG+GGG | - | chr1.1:67688313-67688332 | MS.gene005874:intron | 50.0% | |
| CATTGCTTCTCATTGCGAGG+AGG | + | chr1.1:67687038-67687057 | None:intergenic | 50.0% | |
| CCGAAAAGGGATGGGGAAAA+CGG | - | chr1.1:67687924-67687943 | MS.gene005874:intron | 50.0% | |
| GCCACAATCGCTTCACAACT+TGG | - | chr1.1:67683846-67683865 | MS.gene005874:CDS | 50.0% | |
| GCGGCAAACATGCATCTGTT+GGG | + | chr1.1:67687461-67687480 | None:intergenic | 50.0% | |
| GTCGACGGCATTCAACAGTT+TGG | - | chr1.1:67685403-67685422 | MS.gene005874:intron | 50.0% | |
| GTTGAATGCCGTCGACAAGA+AGG | + | chr1.1:67685399-67685418 | None:intergenic | 50.0% | |
| TAGGTAACACAAGAGTGGCC+TGG | - | chr1.1:67686342-67686361 | MS.gene005874:intron | 50.0% | |
| TCAGAGCCAGTCTCCGAAAA+GGG | - | chr1.1:67687911-67687930 | MS.gene005874:intron | 50.0% | |
| TGAAGCCCGTTCAAGAGGAT+AGG | + | chr1.1:67686756-67686775 | None:intergenic | 50.0% | |
| TGGGGAAAACGGAGAGCAAA+TGG | - | chr1.1:67687935-67687954 | MS.gene005874:intron | 50.0% | |
| TGTGTGCCGTGTTATGGGAA+TGG | + | chr1.1:67685210-67685229 | None:intergenic | 50.0% | |
| TTCAGAGCCAGTCTCCGAAA+AGG | - | chr1.1:67687910-67687929 | MS.gene005874:intron | 50.0% | |
| TTCTCATTGCGAGGAGGTTC+AGG | + | chr1.1:67687032-67687051 | None:intergenic | 50.0% | |
| TTGGTTGGAGACGTTGTGAG+AGG | + | chr1.1:67684957-67684976 | None:intergenic | 50.0% | |
| ! | CAATTTGGGCAAGCTCTGGT+AGG | + | chr1.1:67684315-67684334 | None:intergenic | 50.0% |
| ! | CCGTTTTCCCCATCCCTTTT+CGG | + | chr1.1:67687927-67687946 | None:intergenic | 50.0% |
| ! | CTCTTGAACGGGCTTCAGAA+AGG | - | chr1.1:67686759-67686778 | MS.gene005874:intron | 50.0% |
| ! | CTTTTGTCCACCAACCACGA+CGG | + | chr1.1:67684228-67684247 | None:intergenic | 50.0% |
| ! | TCAGCTTTTCCTCCACTCTC+TGG | + | chr1.1:67686816-67686835 | None:intergenic | 50.0% |
| !! | AAGGAAGGCATCAGTCACAC+AGG | - | chr1.1:67686000-67686019 | MS.gene005874:intron | 50.0% |
| !! | CTTTCTGAAGCCCGTTCAAG+AGG | + | chr1.1:67686761-67686780 | None:intergenic | 50.0% |
| AAGCAGAAGGCTGCAGAGAC+AGG | + | chr1.1:67685184-67685203 | None:intergenic | 55.0% | |
| AGATGGCTTCGAGAAGCGAG+TGG | + | chr1.1:67685367-67685386 | None:intergenic | 55.0% | |
| AGCCAGTCTCCGAAAAGGGA+TGG | - | chr1.1:67687915-67687934 | MS.gene005874:intron | 55.0% | |
| AGGTTCAGGCGTCACGGAAT+TGG | + | chr1.1:67687018-67687037 | None:intergenic | 55.0% | |
| AGTCCACCTGGTAAACGCTG+AGG | + | chr1.1:67686519-67686538 | None:intergenic | 55.0% | |
| ATGTAGACCGTCGTGGTTGG+TGG | - | chr1.1:67684218-67684237 | MS.gene005874:intron | 55.0% | |
| CATCCTCAGCGTTTACCAGG+TGG | - | chr1.1:67686513-67686532 | MS.gene005874:intron | 55.0% | |
| CCAGCAGCAGCAAGCCAAAT+TGG | - | chr1.1:67686923-67686942 | MS.gene005874:intron | 55.0% | |
| CCAGTCTCCGAAAAGGGATG+GGG | - | chr1.1:67687917-67687936 | MS.gene005874:intron | 55.0% | |
| CGATTGTGGCAGCGACATTC+AGG | + | chr1.1:67683836-67683855 | None:intergenic | 55.0% | |
| GAGTGGCCTGGATTACCTAG+AGG | - | chr1.1:67686354-67686373 | MS.gene005874:intron | 55.0% | |
| GATAGTTACGTTGCGTGGGG+TGG | - | chr1.1:67688316-67688335 | MS.gene005874:intron | 55.0% | |
| GCCAGTCTCCGAAAAGGGAT+GGG | - | chr1.1:67687916-67687935 | MS.gene005874:intron | 55.0% | |
| GGTTCAGGCGTCACGGAATT+GGG | + | chr1.1:67687017-67687036 | None:intergenic | 55.0% | |
| GGTTGTGGGTCTGTCTTGGT+TGG | + | chr1.1:67684972-67684991 | None:intergenic | 55.0% | |
| GTCACGGAATTGGGAGTGAC+TGG | + | chr1.1:67687008-67687027 | None:intergenic | 55.0% | |
| !! | AAGATTTTGGCGACGTCCGC+TGG | - | chr1.1:67686709-67686728 | MS.gene005874:intron | 55.0% |
| !! | CCAATTTGGCTTGCTGCTGC+TGG | + | chr1.1:67686926-67686945 | None:intergenic | 55.0% |
| !! | CGTCGTGGTTGGTGGACAAA+AGG | - | chr1.1:67684226-67684245 | MS.gene005874:intron | 55.0% |
| ! | CCCCATCCCTTTTCGGAGAC+TGG | + | chr1.1:67687920-67687939 | None:intergenic | 60.0% |
| ! | TCCTTCCGGTCTTGTGCCAG+CGG | + | chr1.1:67686728-67686747 | None:intergenic | 60.0% |
| GACGTCCGCTGGCACAAGAC+CGG | - | chr1.1:67686720-67686739 | MS.gene005874:intron | 65.0% | |
| GCGAGGAGGTTCAGGCGTCA+CGG | + | chr1.1:67687024-67687043 | None:intergenic | 65.0% | |
| TCCGCTGGCACAAGACCGGA+AGG | - | chr1.1:67686724-67686743 | MS.gene005874:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 67683265 | 67688357 | 67683265 | ID=MS.gene005874 |
| chr1.1 | mRNA | 67683265 | 67688357 | 67683265 | ID=MS.gene005874.t1;Parent=MS.gene005874 |
| chr1.1 | exon | 67688344 | 67688357 | 67688344 | ID=MS.gene005874.t1.exon1;Parent=MS.gene005874.t1 |
| chr1.1 | CDS | 67688344 | 67688357 | 67688344 | ID=cds.MS.gene005874.t1;Parent=MS.gene005874.t1 |
| chr1.1 | exon | 67687263 | 67687398 | 67687263 | ID=MS.gene005874.t1.exon2;Parent=MS.gene005874.t1 |
| chr1.1 | CDS | 67687263 | 67687398 | 67687263 | ID=cds.MS.gene005874.t1;Parent=MS.gene005874.t1 |
| chr1.1 | exon | 67685091 | 67685277 | 67685091 | ID=MS.gene005874.t1.exon3;Parent=MS.gene005874.t1 |
| chr1.1 | CDS | 67685091 | 67685277 | 67685091 | ID=cds.MS.gene005874.t1;Parent=MS.gene005874.t1 |
| chr1.1 | exon | 67684522 | 67685006 | 67684522 | ID=MS.gene005874.t1.exon4;Parent=MS.gene005874.t1 |
| chr1.1 | CDS | 67684522 | 67685006 | 67684522 | ID=cds.MS.gene005874.t1;Parent=MS.gene005874.t1 |
| chr1.1 | exon | 67683429 | 67683899 | 67683429 | ID=MS.gene005874.t1.exon5;Parent=MS.gene005874.t1 |
| chr1.1 | CDS | 67683429 | 67683899 | 67683429 | ID=cds.MS.gene005874.t1;Parent=MS.gene005874.t1 |
| chr1.1 | exon | 67683265 | 67683321 | 67683265 | ID=MS.gene005874.t1.exon6;Parent=MS.gene005874.t1 |
| chr1.1 | CDS | 67683265 | 67683321 | 67683265 | ID=cds.MS.gene005874.t1;Parent=MS.gene005874.t1 |
| Gene Sequence |
| Protein sequence |
