Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005877.t1 | XP_003591832.1 | 98.5 | 339 | 4 | 1 | 1 | 339 | 1 | 338 | 1.60E-134 | 489.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005877.t1 | Q9S7Y1 | 61.3 | 243 | 72 | 6 | 93 | 317 | 96 | 334 | 4.5e-66 | 253.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005877.t1 | G7I4X0 | 98.5 | 339 | 4 | 1 | 1 | 339 | 1 | 338 | 1.1e-134 | 489.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene005877.t1 | TF | bHLH |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005877.t1 | MTR_1g093750 | 98.235 | 340 | 3 | 2 | 1 | 339 | 1 | 338 | 0.0 | 685 |
| MS.gene005877.t1 | MTR_3g070970 | 42.661 | 218 | 111 | 5 | 123 | 331 | 42 | 254 | 5.80e-50 | 167 |
| MS.gene005877.t1 | MTR_2g015890 | 43.182 | 176 | 86 | 5 | 149 | 317 | 56 | 224 | 2.86e-34 | 126 |
| MS.gene005877.t1 | MTR_4g079760 | 40.104 | 192 | 104 | 2 | 155 | 339 | 64 | 251 | 2.43e-30 | 116 |
| MS.gene005877.t1 | MTR_2g091190 | 41.899 | 179 | 93 | 3 | 145 | 316 | 45 | 219 | 6.32e-30 | 115 |
| MS.gene005877.t1 | MTR_2g015890 | 47.200 | 125 | 58 | 2 | 149 | 272 | 56 | 173 | 2.02e-26 | 104 |
| MS.gene005877.t1 | MTR_5g066080 | 34.498 | 229 | 108 | 4 | 136 | 327 | 8 | 231 | 2.49e-25 | 102 |
| MS.gene005877.t1 | MTR_4g087920 | 42.857 | 182 | 90 | 6 | 143 | 317 | 62 | 236 | 4.72e-24 | 99.8 |
| MS.gene005877.t1 | MTR_5g032375 | 32.370 | 173 | 93 | 4 | 157 | 316 | 43 | 204 | 2.07e-22 | 94.0 |
| MS.gene005877.t1 | MTR_2g015890 | 37.594 | 133 | 70 | 4 | 191 | 317 | 1 | 126 | 3.50e-17 | 78.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005877.t1 | AT1G68810 | 63.636 | 264 | 70 | 8 | 96 | 337 | 99 | 358 | 3.27e-92 | 280 |
| MS.gene005877.t1 | AT3G25710 | 49.375 | 320 | 99 | 8 | 72 | 333 | 22 | 336 | 1.92e-78 | 244 |
| MS.gene005877.t1 | AT3G56770 | 45.882 | 170 | 84 | 4 | 151 | 317 | 37 | 201 | 2.01e-41 | 144 |
| MS.gene005877.t1 | AT2G41130 | 45.506 | 178 | 86 | 5 | 143 | 317 | 55 | 224 | 7.42e-37 | 133 |
| MS.gene005877.t1 | AT2G40200 | 41.579 | 190 | 90 | 8 | 130 | 311 | 38 | 214 | 3.14e-33 | 124 |
| MS.gene005877.t1 | AT4G38070 | 36.620 | 142 | 78 | 3 | 153 | 294 | 87 | 216 | 3.74e-24 | 99.8 |
| MS.gene005877.t1 | AT1G01260 | 30.556 | 180 | 100 | 8 | 38 | 207 | 314 | 478 | 4.03e-11 | 64.3 |
| MS.gene005877.t1 | AT1G01260 | 30.556 | 180 | 100 | 8 | 38 | 207 | 314 | 478 | 4.03e-11 | 64.3 |
| MS.gene005877.t1 | AT1G01260 | 30.556 | 180 | 100 | 8 | 38 | 207 | 314 | 478 | 4.03e-11 | 64.3 |
Find 57 sgRNAs with CRISPR-Local
Find 101 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGCAAGTTTGTTCAATAGA+AGG | 0.283417 | 1.1:-67728339 | MS.gene005877:CDS |
| GATGAGTGCTCAAGAAATTA+TGG | 0.286315 | 1.1:-67728191 | MS.gene005877:CDS |
| TCAAGACATTGAAAGCATTA+AGG | 0.296728 | 1.1:-67726753 | MS.gene005877:CDS |
| TTCAATGTCTTGATTAGTTC+AGG | 0.303436 | 1.1:+67726763 | None:intergenic |
| ATGCAGGTTCTGAGCATCTT+AGG | 0.326044 | 1.1:-67728285 | MS.gene005877:CDS |
| GCAGATGATGATGAAGATTA+TGG | 0.331671 | 1.1:-67726850 | MS.gene005877:CDS |
| GTTGGAGATGAATCTGCTTC+TGG | 0.334849 | 1.1:-67726592 | MS.gene005877:CDS |
| AATAGTGATCATCATATCTT+TGG | 0.353704 | 1.1:-67728520 | MS.gene005877:CDS |
| GGATCAGGTTCAGGCCCCTT+TGG | 0.366768 | 1.1:-67728238 | MS.gene005877:CDS |
| GACCATGTTTGTTGCAAGAT+TGG | 0.409233 | 1.1:+67728442 | None:intergenic |
| GATGAAGATTATGGATCAAA+TGG | 0.416803 | 1.1:-67726841 | MS.gene005877:CDS |
| TTCAGCTTCACTATGACTCT+TGG | 0.417321 | 1.1:+67728147 | None:intergenic |
| TCATCACATTCAGTTGGAAC+TGG | 0.424698 | 1.1:+67726889 | None:intergenic |
| TTACTAATATATACTTACTT+TGG | 0.433855 | 1.1:+67728060 | None:intergenic |
| CCTCACTTTGCTGTGATGAT+AGG | 0.438078 | 1.1:-67726798 | MS.gene005877:CDS |
| ATACTTACTTTGGTTGTGCT+TGG | 0.449724 | 1.1:+67728070 | None:intergenic |
| CTATTGAACAAACTTGCATA+AGG | 0.450006 | 1.1:+67728343 | None:intergenic |
| GCCTCATCATCTGTTGTTGA+AGG | 0.470688 | 1.1:+67728548 | None:intergenic |
| TGCAAGTTTGTTCAATAGAA+GGG | 0.484018 | 1.1:-67728338 | MS.gene005877:CDS |
| CTTCAACATGGATCAGGTTC+AGG | 0.485258 | 1.1:-67728247 | MS.gene005877:CDS |
| TCAGGTTCAGGCCCCTTTGG+TGG | 0.487292 | 1.1:-67728235 | MS.gene005877:CDS |
| GTTAATTCATCACATTCAGT+TGG | 0.495856 | 1.1:+67726883 | None:intergenic |
| TTCCCTACAGCAGGAGGAGG+GGG | 0.504915 | 1.1:-67728481 | MS.gene005877:CDS |
| AGTGATCATCATATCTTTGG+TGG | 0.524209 | 1.1:-67728517 | MS.gene005877:CDS |
| TCACCTTGAAAACCACCAAA+GGG | 0.525646 | 1.1:+67728223 | None:intergenic |
| ATGTTCCCTACAGCAGGAGG+AGG | 0.528325 | 1.1:-67728484 | MS.gene005877:CDS |
| AGGTCTATGTTCCCTACAGC+AGG | 0.528893 | 1.1:-67728490 | MS.gene005877:CDS |
| GCTGATATAACAACACTTGG+AGG | 0.532615 | 1.1:-67726715 | MS.gene005877:CDS |
| CACCAATCTTGCAACAAACA+TGG | 0.533876 | 1.1:-67728444 | MS.gene005877:CDS |
| TTTGCATATGATCATCATGC+AGG | 0.543634 | 1.1:-67728301 | MS.gene005877:CDS |
| TCAAGAAATTATGGAGGCTA+AGG | 0.546278 | 1.1:-67728182 | MS.gene005877:CDS |
| GATACACTTCAACATGGATC+AGG | 0.552437 | 1.1:-67728253 | MS.gene005877:CDS |
| ATCATATCTTTGGTGGAGGA+AGG | 0.562826 | 1.1:-67728510 | MS.gene005877:CDS |
| TGTTCCCTACAGCAGGAGGA+GGG | 0.570414 | 1.1:-67728483 | MS.gene005877:CDS |
| TCATATGCAAACTGAAGAGA+AGG | 0.572922 | 1.1:+67728313 | None:intergenic |
| AGAAGCACTCAAAGCTGTGA+TGG | 0.573378 | 1.1:-67726623 | MS.gene005877:CDS |
| AGCTGCGTAGCTTAGCAAGA+TGG | 0.576612 | 1.1:+67728098 | None:intergenic |
| TCCTTCAACAACAGATGATG+AGG | 0.577140 | 1.1:-67728549 | MS.gene005877:CDS |
| GATCATCATATCTTTGGTGG+AGG | 0.579767 | 1.1:-67728514 | MS.gene005877:CDS |
| TTCACCTTGAAAACCACCAA+AGG | 0.583876 | 1.1:+67728222 | None:intergenic |
| GTTCCCTACAGCAGGAGGAG+GGG | 0.584625 | 1.1:-67728482 | MS.gene005877:CDS |
| AAAGGGTCATGAGGGTTGAA+AGG | 0.588818 | 1.1:+67728391 | None:intergenic |
| TGTTGTTGAGGAATAACGAA+AGG | 0.589817 | 1.1:+67728373 | None:intergenic |
| TAAGGTGAAGCTTGTTGTTG+AGG | 0.593376 | 1.1:+67728361 | None:intergenic |
| GTTGTTGAGGAATAACGAAA+GGG | 0.597793 | 1.1:+67728374 | None:intergenic |
| AGAGTCATAGTGAAGCTGAA+AGG | 0.601072 | 1.1:-67728144 | MS.gene005877:CDS |
| AAAGCTGATATAACAACACT+TGG | 0.602897 | 1.1:-67726718 | MS.gene005877:CDS |
| CTGGAAGTGTCAAGAGACAA+AGG | 0.603991 | 1.1:-67726573 | MS.gene005877:CDS |
| GCTGTGATGGAGAAGAGTGT+TGG | 0.619796 | 1.1:-67726610 | MS.gene005877:CDS |
| GAATAACGAAAGGGTCATGA+GGG | 0.626099 | 1.1:+67728383 | None:intergenic |
| CCTATCATCACAGCAAAGTG+AGG | 0.634985 | 1.1:+67726798 | None:intergenic |
| AGTATGATACAAGAAGATCA+AGG | 0.636259 | 1.1:-67728628 | MS.gene005877:CDS |
| GGAATAACGAAAGGGTCATG+AGG | 0.647080 | 1.1:+67728382 | None:intergenic |
| TCTATGTTCCCTACAGCAGG+AGG | 0.647545 | 1.1:-67728487 | MS.gene005877:CDS |
| CACCTTGAAAACCACCAAAG+GGG | 0.675283 | 1.1:+67728224 | None:intergenic |
| ATATCAGATACACTTCAACA+TGG | 0.699194 | 1.1:-67728259 | MS.gene005877:CDS |
| GAGTGCTCAAGAAATTATGG+AGG | 0.703562 | 1.1:-67728188 | MS.gene005877:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTTATAGTTAATTAAAG+TGG | + | chr1.1:67728095-67728114 | None:intergenic | 10.0% |
| !! | ATTATATATTAGTACTATAT+TGG | + | chr1.1:67727272-67727291 | None:intergenic | 10.0% |
| !! | TTACTAATATATACTTACTT+TGG | + | chr1.1:67727114-67727133 | None:intergenic | 15.0% |
| !!! | AGATATTTTGAATTTACAAA+AGG | + | chr1.1:67727377-67727396 | None:intergenic | 15.0% |
| !!! | ATTGTTCTCTTTTTTTTTTT+TGG | - | chr1.1:67727521-67727540 | MS.gene005877:intron | 15.0% |
| !! | ATAGATCTGATATATACATA+AGG | + | chr1.1:67727947-67727966 | None:intergenic | 20.0% |
| !! | TATGATATAAGAATGTGAAA+TGG | + | chr1.1:67727906-67727925 | None:intergenic | 20.0% |
| !! | TGAAAATATTTACAATCTCA+TGG | + | chr1.1:67727980-67727999 | None:intergenic | 20.0% |
| !!! | AATAGTGGATATATTTTGAA+TGG | + | chr1.1:67727882-67727901 | None:intergenic | 20.0% |
| !!! | ATATAACCTTTTAGAAAATG+AGG | - | chr1.1:67727434-67727453 | MS.gene005877:intron | 20.0% |
| !!! | GATTTTGATTTTGTTGTTTA+TGG | + | chr1.1:67727412-67727431 | None:intergenic | 20.0% |
| !!! | GTAACTATATGTTTTGTTTT+GGG | - | chr1.1:67727575-67727594 | MS.gene005877:intron | 20.0% |
| !!! | TGTAACTATATGTTTTGTTT+TGG | - | chr1.1:67727574-67727593 | MS.gene005877:intron | 20.0% |
| ! | AATAGTGATCATCATATCTT+TGG | - | chr1.1:67726651-67726670 | MS.gene005877:CDS | 25.0% |
| ! | AATATTTACAATCTCATGGT+AGG | + | chr1.1:67727976-67727995 | None:intergenic | 25.0% |
| ! | ATATTTACAATCTCATGGTA+GGG | + | chr1.1:67727975-67727994 | None:intergenic | 25.0% |
| ! | ATCTGATATATACATAAGGT+TGG | + | chr1.1:67727943-67727962 | None:intergenic | 25.0% |
| ! | GGCATATATTGAATTCAAAA+AGG | + | chr1.1:67727356-67727375 | None:intergenic | 25.0% |
| ! | TGAAAATATATTGTCTTTGC+CGG | - | chr1.1:67727739-67727758 | MS.gene005877:intron | 25.0% |
| ! | TGGAGAATGAAAAGAAATAA+AGG | - | chr1.1:67727789-67727808 | MS.gene005877:intron | 25.0% |
| !! | GGTTTGCATTTTAAATTTCT+TGG | + | chr1.1:67727228-67727247 | None:intergenic | 25.0% |
| !!! | AAGAATGTTTTGTTCATTAC+TGG | - | chr1.1:67728486-67728505 | MS.gene005877:CDS | 25.0% |
| AAAGCTGATATAACAACACT+TGG | - | chr1.1:67728453-67728472 | MS.gene005877:CDS | 30.0% | |
| AGAATGTGAAATGGAAATAG+TGG | + | chr1.1:67727897-67727916 | None:intergenic | 30.0% | |
| ATATCAGATACACTTCAACA+TGG | - | chr1.1:67726912-67726931 | MS.gene005877:CDS | 30.0% | |
| CTATTGAACAAACTTGCATA+AGG | + | chr1.1:67726831-67726850 | None:intergenic | 30.0% | |
| GAATTAGTGTTAATGTCTCT+TGG | - | chr1.1:67727670-67727689 | MS.gene005877:intron | 30.0% | |
| GATGAAGATTATGGATCAAA+TGG | - | chr1.1:67728330-67728349 | MS.gene005877:CDS | 30.0% | |
| GTTAATTCATCACATTCAGT+TGG | + | chr1.1:67728291-67728310 | None:intergenic | 30.0% | |
| TGACTGATCAACATATTATC+CGG | + | chr1.1:67727761-67727780 | None:intergenic | 30.0% | |
| ! | ATGCAAGTTTGTTCAATAGA+AGG | - | chr1.1:67726832-67726851 | MS.gene005877:CDS | 30.0% |
| ! | GATATATACATAAGGTTGGT+AGG | + | chr1.1:67727939-67727958 | None:intergenic | 30.0% |
| ! | GCTTTTGTTAACATCCTTTT+TGG | - | chr1.1:67727482-67727501 | MS.gene005877:intron | 30.0% |
| ! | TGCAAGTTTGTTCAATAGAA+GGG | - | chr1.1:67726833-67726852 | MS.gene005877:CDS | 30.0% |
| ! | TTCAATGTCTTGATTAGTTC+AGG | + | chr1.1:67728411-67728430 | None:intergenic | 30.0% |
| ! | TTTGCACCTCATTTTCTAAA+AGG | + | chr1.1:67727443-67727462 | None:intergenic | 30.0% |
| !! | AGTGGATATATTTTGAATGG+TGG | + | chr1.1:67727879-67727898 | None:intergenic | 30.0% |
| !! | TCAAGACATTGAAAGCATTA+AGG | - | chr1.1:67728418-67728437 | MS.gene005877:CDS | 30.0% |
| !! | TTGAGTTGAGATCTTTGATT+AGG | + | chr1.1:67727249-67727268 | None:intergenic | 30.0% |
| AGTGATCATCATATCTTTGG+TGG | - | chr1.1:67726654-67726673 | MS.gene005877:CDS | 35.0% | |
| ATACTTACTTTGGTTGTGCT+TGG | + | chr1.1:67727104-67727123 | None:intergenic | 35.0% | |
| GATGAGTGCTCAAGAAATTA+TGG | - | chr1.1:67726980-67726999 | MS.gene005877:intron | 35.0% | |
| GTATACCAAACAAGCCAAAA+AGG | + | chr1.1:67727499-67727518 | None:intergenic | 35.0% | |
| GTTATGTTTGTGACTGACAA+AGG | + | chr1.1:67727833-67727852 | None:intergenic | 35.0% | |
| GTTGATCAGTCAAACTCAAT+TGG | - | chr1.1:67727769-67727788 | MS.gene005877:intron | 35.0% | |
| GTTGTTGAGGAATAACGAAA+GGG | + | chr1.1:67726800-67726819 | None:intergenic | 35.0% | |
| TATAATGTGTGGTAGTTCCA+AGG | - | chr1.1:67727606-67727625 | MS.gene005877:intron | 35.0% | |
| TCAAGAAATTATGGAGGCTA+AGG | - | chr1.1:67726989-67727008 | MS.gene005877:intron | 35.0% | |
| TCATATGCAAACTGAAGAGA+AGG | + | chr1.1:67726861-67726880 | None:intergenic | 35.0% | |
| TGTCTCTTGGTATGATAAAG+AGG | - | chr1.1:67727683-67727702 | MS.gene005877:intron | 35.0% | |
| TGTTGTTGAGGAATAACGAA+AGG | + | chr1.1:67726801-67726820 | None:intergenic | 35.0% | |
| TTTGCATATGATCATCATGC+AGG | - | chr1.1:67726870-67726889 | MS.gene005877:CDS | 35.0% | |
| ! | GCAGATGATGATGAAGATTA+TGG | - | chr1.1:67728321-67728340 | MS.gene005877:CDS | 35.0% |
| !! | TTTTCAACTGCATGCTGTTT+TGG | + | chr1.1:67727711-67727730 | None:intergenic | 35.0% |
| !!! | AACATCCTTTTTGGCTTGTT+TGG | - | chr1.1:67727491-67727510 | MS.gene005877:intron | 35.0% |
| !!! | GCAAGAGTGTTTTTTCTAAG+TGG | - | chr1.1:67727330-67727349 | MS.gene005877:intron | 35.0% |
| AGAGTCATAGTGAAGCTGAA+AGG | - | chr1.1:67727027-67727046 | MS.gene005877:intron | 40.0% | |
| ATCATATCTTTGGTGGAGGA+AGG | - | chr1.1:67726661-67726680 | MS.gene005877:CDS | 40.0% | |
| CACCAATCTTGCAACAAACA+TGG | - | chr1.1:67726727-67726746 | MS.gene005877:CDS | 40.0% | |
| CTAGCTGGCTAAAGAAAAAG+TGG | - | chr1.1:67727635-67727654 | MS.gene005877:intron | 40.0% | |
| GAATAACGAAAGGGTCATGA+GGG | + | chr1.1:67726791-67726810 | None:intergenic | 40.0% | |
| GAGTGCTCAAGAAATTATGG+AGG | - | chr1.1:67726983-67727002 | MS.gene005877:intron | 40.0% | |
| GATACACTTCAACATGGATC+AGG | - | chr1.1:67726918-67726937 | MS.gene005877:CDS | 40.0% | |
| GATCATCATATCTTTGGTGG+AGG | - | chr1.1:67726657-67726676 | MS.gene005877:CDS | 40.0% | |
| GCTGATATAACAACACTTGG+AGG | - | chr1.1:67728456-67728475 | MS.gene005877:CDS | 40.0% | |
| TCACCTTGAAAACCACCAAA+GGG | + | chr1.1:67726951-67726970 | None:intergenic | 40.0% | |
| TCATCACATTCAGTTGGAAC+TGG | + | chr1.1:67728285-67728304 | None:intergenic | 40.0% | |
| TCCTTCAACAACAGATGATG+AGG | - | chr1.1:67726622-67726641 | MS.gene005877:CDS | 40.0% | |
| TTCACCTTGAAAACCACCAA+AGG | + | chr1.1:67726952-67726971 | None:intergenic | 40.0% | |
| TTCAGCTTCACTATGACTCT+TGG | + | chr1.1:67727027-67727046 | None:intergenic | 40.0% | |
| ! | GACCATGTTTGTTGCAAGAT+TGG | + | chr1.1:67726732-67726751 | None:intergenic | 40.0% |
| !! | TAAGGTGAAGCTTGTTGTTG+AGG | + | chr1.1:67726813-67726832 | None:intergenic | 40.0% |
| AAAGGGTCATGAGGGTTGAA+AGG | + | chr1.1:67726783-67726802 | None:intergenic | 45.0% | |
| CACCTTGAAAACCACCAAAG+GGG | + | chr1.1:67726950-67726969 | None:intergenic | 45.0% | |
| CCTATCATCACAGCAAAGTG+AGG | + | chr1.1:67728376-67728395 | None:intergenic | 45.0% | |
| CTTCAACATGGATCAGGTTC+AGG | - | chr1.1:67726924-67726943 | MS.gene005877:CDS | 45.0% | |
| GCCTCATCATCTGTTGTTGA+AGG | + | chr1.1:67726626-67726645 | None:intergenic | 45.0% | |
| GGAATAACGAAAGGGTCATG+AGG | + | chr1.1:67726792-67726811 | None:intergenic | 45.0% | |
| GTTGGAGATGAATCTGCTTC+TGG | - | chr1.1:67728579-67728598 | MS.gene005877:CDS | 45.0% | |
| ! | CCTCACTTTGCTGTGATGAT+AGG | - | chr1.1:67728373-67728392 | MS.gene005877:CDS | 45.0% |
| !! | AGAAGCACTCAAAGCTGTGA+TGG | - | chr1.1:67728548-67728567 | MS.gene005877:CDS | 45.0% |
| !! | ATGCAGGTTCTGAGCATCTT+AGG | - | chr1.1:67726886-67726905 | MS.gene005877:CDS | 45.0% |
| !! | CTGGAAGTGTCAAGAGACAA+AGG | - | chr1.1:67728598-67728617 | MS.gene005877:CDS | 45.0% |
| !! | GGGAGTGTCTCTATAATGTG+TGG | - | chr1.1:67727595-67727614 | MS.gene005877:intron | 45.0% |
| !! | GGTGGTTTTCAAGGTGAAGT+TGG | - | chr1.1:67726954-67726973 | MS.gene005877:CDS | 45.0% |
| AGCTGCGTAGCTTAGCAAGA+TGG | + | chr1.1:67727076-67727095 | None:intergenic | 50.0% | |
| AGGTCTATGTTCCCTACAGC+AGG | - | chr1.1:67726681-67726700 | MS.gene005877:CDS | 50.0% | |
| TCTATGTTCCCTACAGCAGG+AGG | - | chr1.1:67726684-67726703 | MS.gene005877:CDS | 50.0% | |
| TGAGCTGAGCTGAGATCTCA+TGG | + | chr1.1:67728006-67728025 | None:intergenic | 50.0% | |
| ! | GCTGTGATGGAGAAGAGTGT+TGG | - | chr1.1:67728561-67728580 | MS.gene005877:CDS | 50.0% |
| ATGTTCCCTACAGCAGGAGG+AGG | - | chr1.1:67726687-67726706 | MS.gene005877:CDS | 55.0% | |
| GTTCCAAGGAAGCAGCTAGC+TGG | - | chr1.1:67727620-67727639 | MS.gene005877:intron | 55.0% | |
| TAGCCAGCTAGCTGCTTCCT+TGG | + | chr1.1:67727626-67727645 | None:intergenic | 55.0% | |
| TGTTCCCTACAGCAGGAGGA+GGG | - | chr1.1:67726688-67726707 | MS.gene005877:CDS | 55.0% | |
| !! | GGCCCCTTTGGTGGTTTTCA+AGG | - | chr1.1:67726945-67726964 | MS.gene005877:CDS | 55.0% |
| GGATCAGGTTCAGGCCCCTT+TGG | - | chr1.1:67726933-67726952 | MS.gene005877:CDS | 60.0% | |
| GTTCCCTACAGCAGGAGGAG+GGG | - | chr1.1:67726689-67726708 | MS.gene005877:CDS | 60.0% | |
| TCAGGTTCAGGCCCCTTTGG+TGG | - | chr1.1:67726936-67726955 | MS.gene005877:CDS | 60.0% | |
| TTCCCTACAGCAGGAGGAGG+GGG | - | chr1.1:67726690-67726709 | MS.gene005877:CDS | 60.0% | |
| CACCCCCTCCTCCTGCTGTA+GGG | + | chr1.1:67726695-67726714 | None:intergenic | 65.0% | |
| TCACCCCCTCCTCCTGCTGT+AGG | + | chr1.1:67726696-67726715 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 67726546 | 67728647 | 67726546 | ID=MS.gene005877 |
| chr1.1 | mRNA | 67726546 | 67728647 | 67726546 | ID=MS.gene005877.t1;Parent=MS.gene005877 |
| chr1.1 | exon | 67728074 | 67728647 | 67728074 | ID=MS.gene005877.t1.exon1;Parent=MS.gene005877.t1 |
| chr1.1 | CDS | 67728074 | 67728647 | 67728074 | ID=cds.MS.gene005877.t1;Parent=MS.gene005877.t1 |
| chr1.1 | exon | 67726546 | 67726991 | 67726546 | ID=MS.gene005877.t1.exon2;Parent=MS.gene005877.t1 |
| chr1.1 | CDS | 67726546 | 67726991 | 67726546 | ID=cds.MS.gene005877.t1;Parent=MS.gene005877.t1 |
| Gene Sequence |
| Protein sequence |
