Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005890.t1 | KEH43530.1 | 93.7 | 907 | 37 | 2 | 4 | 890 | 296 | 1202 | 0.00E+00 | 1646.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005890.t1 | Q4KKX4 | 40.0 | 120 | 69 | 2 | 14 | 133 | 373 | 489 | 3.0e-16 | 89.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005890.t1 | A0A072VZP3 | 93.7 | 907 | 37 | 2 | 4 | 890 | 296 | 1202 | 0.0e+00 | 1646.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene005890.t1 | TF | MYB |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005890.t1 | MTR_1g095570 | 93.716 | 907 | 37 | 2 | 4 | 890 | 296 | 1202 | 0.0 | 1748 |
| MS.gene005890.t1 | MTR_1g095570 | 93.716 | 907 | 37 | 2 | 4 | 890 | 728 | 1634 | 0.0 | 1739 |
| MS.gene005890.t1 | MTR_6g033350 | 48.739 | 595 | 232 | 10 | 3 | 534 | 8 | 592 | 1.42e-147 | 455 |
| MS.gene005890.t1 | MTR_6g033350 | 39.766 | 171 | 66 | 7 | 609 | 758 | 595 | 749 | 2.86e-19 | 93.6 |
| MS.gene005890.t1 | MTR_6g033345 | 47.685 | 216 | 109 | 3 | 149 | 361 | 27 | 241 | 8.17e-43 | 156 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005890.t1 | AT3G52250 | 39.492 | 433 | 197 | 13 | 9 | 380 | 801 | 1229 | 1.16e-72 | 262 |
| MS.gene005890.t1 | AT3G52250 | 37.063 | 143 | 72 | 6 | 620 | 761 | 1479 | 1604 | 1.67e-12 | 72.4 |
| MS.gene005890.t1 | AT3G52250 | 39.492 | 433 | 197 | 13 | 9 | 380 | 801 | 1229 | 1.16e-72 | 262 |
| MS.gene005890.t1 | AT3G52250 | 37.063 | 143 | 72 | 6 | 620 | 761 | 1479 | 1604 | 1.67e-12 | 72.4 |
Find 205 sgRNAs with CRISPR-Local
Find 247 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGTTTCACGTCACCATTTC+TGG | 0.095825 | 1.1:-67851218 | None:intergenic |
| CATCAGTCTGTTTGACCTTT+TGG | 0.147569 | 1.1:-67851150 | None:intergenic |
| GACCATCAGCTTCCTCTTTC+GGG | 0.162838 | 1.1:+67851010 | MS.gene005890:CDS |
| ACGGTTTCCGAGGGTTCTTC+TGG | 0.182952 | 1.1:+67850593 | MS.gene005890:CDS |
| TCCTACATCATCTTCCAATT+TGG | 0.198327 | 1.1:+67851540 | MS.gene005890:CDS |
| CTGCATTTGGAAAAGATTTC+CGG | 0.212447 | 1.1:+67849392 | MS.gene005890:CDS |
| CTTCAGGCTGTATCATCTTT+TGG | 0.228973 | 1.1:+67850014 | MS.gene005890:CDS |
| TTGAAGAAATTTGCTGCATT+TGG | 0.231426 | 1.1:+67849379 | MS.gene005890:CDS |
| TCCACAAATTCAGCCATTTA+TGG | 0.233049 | 1.1:+67851696 | MS.gene005890:CDS |
| GTCCTCTACTTGTGATATTC+AGG | 0.238661 | 1.1:+67850946 | MS.gene005890:CDS |
| CAAATGCCGTTCACTATTCT+TGG | 0.252464 | 1.1:-67851590 | None:intergenic |
| TCAAGGGTTGTTTGAATATA+GGG | 0.252482 | 1.1:-67849896 | None:intergenic |
| CTTCGCTTCGCAGTCAAAAT+AGG | 0.263813 | 1.1:-67851280 | None:intergenic |
| CAGTGATGAGTTATGGTTAT+TGG | 0.265739 | 1.1:+67851422 | MS.gene005890:CDS |
| TGACCATCAGCTTCCTCTTT+CGG | 0.273178 | 1.1:+67851009 | MS.gene005890:CDS |
| GAAGATGCCTGCATTAATAT+TGG | 0.290191 | 1.1:+67849234 | MS.gene005890:CDS |
| GAAAATAAGCATGTCTCCTT+TGG | 0.304458 | 1.1:+67850812 | MS.gene005890:CDS |
| GTCAAGGGTTGTTTGAATAT+AGG | 0.304984 | 1.1:-67849897 | None:intergenic |
| CTTGATTATCAGATGTTTAG+AGG | 0.307171 | 1.1:+67851664 | MS.gene005890:CDS |
| ATCCGTTAATTCCAGGTATA+GGG | 0.321987 | 1.1:-67850142 | None:intergenic |
| AGAAACGTTTACAATGTTCT+TGG | 0.336514 | 1.1:-67850079 | None:intergenic |
| TGGTGGTTGTTGCTCCAAAT+TGG | 0.339550 | 1.1:-67851554 | None:intergenic |
| TCATGTTCAGGATTGAGTTT+TGG | 0.342826 | 1.1:+67850785 | MS.gene005890:CDS |
| AGTGATGAGTTATGGTTATT+GGG | 0.344144 | 1.1:+67851423 | MS.gene005890:CDS |
| ATCTTTGTCAACAACACATT+GGG | 0.345105 | 1.1:-67850663 | None:intergenic |
| GATCCGTTAATTCCAGGTAT+AGG | 0.346403 | 1.1:-67850143 | None:intergenic |
| TGTTGGACATCAACCATAAA+TGG | 0.346605 | 1.1:-67851709 | None:intergenic |
| CGGTTTCCGAGGGTTCTTCT+GGG | 0.347689 | 1.1:+67850594 | MS.gene005890:CDS |
| AGGAAAGATGTTGGTAAGCT+AGG | 0.352515 | 1.1:+67849508 | MS.gene005890:CDS |
| CCAGTGGTCAATTCATGTTC+AGG | 0.357972 | 1.1:+67850773 | MS.gene005890:CDS |
| GGCTCTGATGTTAGTGGAGT+TGG | 0.365232 | 1.1:+67850446 | MS.gene005890:CDS |
| TCAGTCAATGGAGTTGGCTT+GGG | 0.365440 | 1.1:+67850494 | MS.gene005890:CDS |
| CTTCAGTTTCTCAAAACATT+CGG | 0.369777 | 1.1:-67849485 | None:intergenic |
| TTGTTGGAACCAAGCTTAGA+TGG | 0.371390 | 1.1:-67849144 | None:intergenic |
| TGCAGCTAAAACTAACTTGA+TGG | 0.386341 | 1.1:+67849540 | MS.gene005890:CDS |
| AACCCTATACCTGGAATTAA+CGG | 0.387901 | 1.1:+67850140 | MS.gene005890:CDS |
| CATTTGCATCATCATTCAAC+GGG | 0.388299 | 1.1:-67850166 | None:intergenic |
| GGAGCAACAACCACCATTGC+AGG | 0.388655 | 1.1:+67851561 | MS.gene005890:CDS |
| AACGGGGATCCGTTAATTCC+AGG | 0.391422 | 1.1:-67850149 | None:intergenic |
| ACCATAAATGGCTGAATTTG+TGG | 0.396348 | 1.1:-67851697 | None:intergenic |
| TCAGCATTCTGTGAAATATC+AGG | 0.398068 | 1.1:-67849921 | None:intergenic |
| TGGTTTCCAGCTGCATTCAT+TGG | 0.399916 | 1.1:-67849124 | None:intergenic |
| CAAAGTTCATATCTAGTAAT+GGG | 0.400546 | 1.1:+67849278 | MS.gene005890:CDS |
| TTCAGTCAATGGAGTTGGCT+TGG | 0.405379 | 1.1:+67850493 | MS.gene005890:CDS |
| GGAGTGTGGTTCTGTTGCTT+TGG | 0.409009 | 1.1:+67850565 | MS.gene005890:CDS |
| GAAACGTTTACAATGTTCTT+GGG | 0.410705 | 1.1:-67850078 | None:intergenic |
| ATGAATAGTGTTGGAAGGCC+TGG | 0.410921 | 1.1:+67851820 | MS.gene005890:CDS |
| CTACCTGCCTAAGTCAGAAT+TGG | 0.412650 | 1.1:-67851911 | None:intergenic |
| AGCTAACAAGAAAGAAGAAT+CGG | 0.415727 | 1.1:-67851491 | None:intergenic |
| ATGGTCATTTCAAACCATTA+TGG | 0.422807 | 1.1:+67851170 | MS.gene005890:CDS |
| AGAAGACTTGTTGTTCAACT+TGG | 0.425156 | 1.1:-67851326 | None:intergenic |
| GTTTCCTTGTTACCATCTAC+AGG | 0.428077 | 1.1:-67849855 | None:intergenic |
| TGAGACTGTTAGTGTTCTCC+AGG | 0.428385 | 1.1:+67851042 | MS.gene005890:CDS |
| AAATTAATAATCTCTGTTGT+TGG | 0.431752 | 1.1:-67849160 | None:intergenic |
| ATCAATTGAACTTGTTATGC+AGG | 0.433645 | 1.1:-67849832 | None:intergenic |
| GTGGTTGATGCTGATAAGTC+TGG | 0.434207 | 1.1:+67850236 | MS.gene005890:CDS |
| AGTTCAATTGATCCTGTAGA+TGG | 0.436874 | 1.1:+67849843 | MS.gene005890:CDS |
| AGCAAGACTCGGAAATGTCT+TGG | 0.437017 | 1.1:+67850104 | MS.gene005890:CDS |
| TGCTGCTGCAGCTGATGTAT+TGG | 0.439293 | 1.1:+67849770 | MS.gene005890:CDS |
| CTGCAGTTGTCTTGTGATCA+AGG | 0.444878 | 1.1:-67849429 | None:intergenic |
| AATGGTGACGTGAAACTGTT+TGG | 0.445096 | 1.1:+67851223 | MS.gene005890:CDS |
| TCTCAAAACATTCGGATTTG+TGG | 0.447544 | 1.1:-67849477 | None:intergenic |
| GACAAGTCTGGTTCAGTCAA+TGG | 0.449597 | 1.1:+67850482 | MS.gene005890:CDS |
| GGAAAGATGTTGGTAAGCTA+GGG | 0.450009 | 1.1:+67849509 | MS.gene005890:CDS |
| AAAACTAACTTGATGGCATC+AGG | 0.454263 | 1.1:+67849547 | MS.gene005890:CDS |
| CGTTGGCTATTGAGAAAGAA+AGG | 0.460426 | 1.1:+67849314 | MS.gene005890:CDS |
| CCTTCCTTGCTGCTGCAAGT+TGG | 0.461312 | 1.1:-67851785 | None:intergenic |
| GCTCGTAGCTTCCAGAGGAT+TGG | 0.462557 | 1.1:-67850315 | None:intergenic |
| ACTGTCTATGAGTGATCTTC+AGG | 0.462908 | 1.1:+67850853 | MS.gene005890:CDS |
| TGGAAGGCCTGGGATTCTAG+TGG | 0.463139 | 1.1:+67851831 | MS.gene005890:CDS |
| GCAGCAAGGAAGGGGAATGA+TGG | 0.468489 | 1.1:+67851795 | MS.gene005890:CDS |
| ATTCATTTAATTTAGCAGAC+AGG | 0.468724 | 1.1:-67850337 | None:intergenic |
| AGGATCGTGCAGCGGTGTCT+CGG | 0.469170 | 1.1:+67851855 | MS.gene005890:CDS |
| AAAGAAGAATCGGGCAAGGA+TGG | 0.476975 | 1.1:-67851481 | None:intergenic |
| TGTTGTTCAACTTGGGATGA+TGG | 0.477023 | 1.1:-67851318 | None:intergenic |
| CCAACTTGCAGCAGCAAGGA+AGG | 0.478961 | 1.1:+67851785 | MS.gene005890:CDS |
| AGAATACATCTTGTCGGTGT+TGG | 0.482064 | 1.1:-67851726 | None:intergenic |
| TTCTGTTGCTTTGGATAGAA+CGG | 0.488429 | 1.1:+67850574 | MS.gene005890:CDS |
| TTCATCATGGAATGTATTCA+AGG | 0.488797 | 1.1:-67850291 | None:intergenic |
| ATGAGTTATGGTTATTGGGA+AGG | 0.489537 | 1.1:+67851427 | MS.gene005890:CDS |
| GGATAATTACTAAACGCAGC+AGG | 0.491210 | 1.1:-67851520 | None:intergenic |
| GCAATACAAAGTAGACAGTC+TGG | 0.491815 | 1.1:+67851454 | MS.gene005890:CDS |
| ACAAAGTTCATATCTAGTAA+TGG | 0.493234 | 1.1:+67849277 | MS.gene005890:CDS |
| AAGCTAGGCTCTGATGTTAG+TGG | 0.494092 | 1.1:+67850440 | MS.gene005890:CDS |
| AATAGTGAACGGCATTTGAC+TGG | 0.496893 | 1.1:+67851595 | MS.gene005890:CDS |
| TGAATAGTGTTGGAAGGCCT+GGG | 0.498732 | 1.1:+67851821 | MS.gene005890:CDS |
| CCTGCCTAAGTCAGAATTGG+TGG | 0.499036 | 1.1:-67851908 | None:intergenic |
| ATTCTGAGTGGAAGATGGAT+TGG | 0.500553 | 1.1:-67851257 | None:intergenic |
| GTTTCCTCTTCTACCCCAAA+AGG | 0.501027 | 1.1:+67851135 | MS.gene005890:CDS |
| CCACCAATTCTGACTTAGGC+AGG | 0.502385 | 1.1:+67851908 | MS.gene005890:CDS |
| TTGACACTCTAGGGGATGAA+AGG | 0.502686 | 1.1:+67849742 | MS.gene005890:CDS |
| TATTAATGCAGGCATCTTCA+AGG | 0.504328 | 1.1:-67849230 | None:intergenic |
| CATCTTTGTCAACAACACAT+TGG | 0.504959 | 1.1:-67850664 | None:intergenic |
| ATGGTAATGTAAAAGCATCA+AGG | 0.505302 | 1.1:+67849685 | MS.gene005890:intron |
| ATGTGAGAAAACAGTTAGCC+AGG | 0.506100 | 1.1:+67850916 | MS.gene005890:CDS |
| CCATGATGAATCCAATCCTC+TGG | 0.507935 | 1.1:+67850304 | MS.gene005890:CDS |
| GCTGCAGCTGATGTATTGGC+TGG | 0.508616 | 1.1:+67849774 | MS.gene005890:CDS |
| GTTTCCGAGGGTTCTTCTGG+GGG | 0.518112 | 1.1:+67850596 | MS.gene005890:CDS |
| TTCTCGTCCAATATTAATGC+AGG | 0.519652 | 1.1:-67849241 | None:intergenic |
| TCCTCTACTTGTGATATTCA+GGG | 0.519734 | 1.1:+67850947 | MS.gene005890:CDS |
| AACTTGCAGCAGCAAGGAAG+GGG | 0.521568 | 1.1:+67851787 | MS.gene005890:CDS |
| GGAAGGCCTGGGATTCTAGT+GGG | 0.522762 | 1.1:+67851832 | MS.gene005890:CDS |
| TCTCAGAGAATACATCTTGT+CGG | 0.522774 | 1.1:-67851732 | None:intergenic |
| AAGTAGAGGACAGTCGATCC+TGG | 0.523476 | 1.1:-67850934 | None:intergenic |
| TGAGTTATGGTTATTGGGAA+GGG | 0.524318 | 1.1:+67851428 | MS.gene005890:CDS |
| GAAGACTTGTTGTTCAACTT+GGG | 0.524646 | 1.1:-67851325 | None:intergenic |
| TGCATTAATATTGGACGAGA+AGG | 0.526316 | 1.1:+67849243 | MS.gene005890:CDS |
| ATAGACAGTGCTGACGTATG+AGG | 0.527339 | 1.1:-67850839 | None:intergenic |
| GCAACAGAACCACACTCCCT+TGG | 0.527610 | 1.1:-67850560 | None:intergenic |
| TATTCCACCAATTCTGACTT+AGG | 0.527982 | 1.1:+67851904 | MS.gene005890:CDS |
| CAATAACCATAACTCATCAC+TGG | 0.528467 | 1.1:-67851421 | None:intergenic |
| ATTAATGTTGAATCTAAGCT+AGG | 0.529004 | 1.1:+67850425 | MS.gene005890:CDS |
| AAAGGGGTATGATCAATCCT+TGG | 0.529771 | 1.1:+67849332 | MS.gene005890:CDS |
| GGTTTCCGAGGGTTCTTCTG+GGG | 0.530133 | 1.1:+67850595 | MS.gene005890:CDS |
| CTGTGAAATATCAGGTGTCA+AGG | 0.530637 | 1.1:-67849913 | None:intergenic |
| GTCAATGGAGTTGGCTTGGG+AGG | 0.533146 | 1.1:+67850497 | MS.gene005890:CDS |
| TCTGGTTCAGTCAATGGAGT+TGG | 0.533428 | 1.1:+67850488 | MS.gene005890:CDS |
| CCAGAGGATTGGATTCATCA+TGG | 0.534328 | 1.1:-67850304 | None:intergenic |
| GTTGTTCAACTTGGGATGAT+GGG | 0.534350 | 1.1:-67851317 | None:intergenic |
| ATAGGATTCTGAGTGGAAGA+TGG | 0.534964 | 1.1:-67851262 | None:intergenic |
| CCGTTCACTATTCTTGGCAA+AGG | 0.535805 | 1.1:-67851584 | None:intergenic |
| AACATTAATTGCACAAACAA+CGG | 0.536070 | 1.1:-67850411 | None:intergenic |
| GTTAAACATATAGCAGATGC+AGG | 0.536991 | 1.1:+67850686 | MS.gene005890:CDS |
| ATTGGACGAGAAGGAGAAGA+TGG | 0.537020 | 1.1:+67849252 | MS.gene005890:CDS |
| TCTTTCTCTTCTGATGTCCA+AGG | 0.537333 | 1.1:-67849349 | None:intergenic |
| AGCTGGAAACCATCTAAGCT+TGG | 0.539705 | 1.1:+67849135 | MS.gene005890:CDS |
| CAGCAAGGAAGGGGAATGAT+GGG | 0.541066 | 1.1:+67851796 | MS.gene005890:CDS |
| TTGTGCACAACAGACAAGTC+TGG | 0.542147 | 1.1:+67850470 | MS.gene005890:CDS |
| TCAACATGGCTCCCCGAAAG+AGG | 0.543779 | 1.1:-67851022 | None:intergenic |
| TGGTAATGTAAAAGCATCAA+GGG | 0.544738 | 1.1:+67849686 | MS.gene005890:intron |
| CCATTTGCATCATCATTCAA+CGG | 0.545135 | 1.1:-67850167 | None:intergenic |
| TGACACTCTAGGGGATGAAA+GGG | 0.545184 | 1.1:+67849743 | MS.gene005890:CDS |
| GCTAACAAGAAAGAAGAATC+GGG | 0.545527 | 1.1:-67851490 | None:intergenic |
| GTTCATATCTAGTAATGGGC+TGG | 0.546102 | 1.1:+67849282 | MS.gene005890:CDS |
| AAGAAGAATCGGGCAAGGAT+GGG | 0.548268 | 1.1:-67851480 | None:intergenic |
| AAACTGAAGAGGAAAGATGT+TGG | 0.549660 | 1.1:+67849499 | MS.gene005890:CDS |
| TCTCCAGGGCTATTCCATAC+AGG | 0.549701 | 1.1:+67851057 | MS.gene005890:CDS |
| TATTCAAGGCATCAGAAGGC+AGG | 0.549966 | 1.1:-67850277 | None:intergenic |
| GTTGGCTATTGAGAAAGAAA+GGG | 0.551049 | 1.1:+67849315 | MS.gene005890:CDS |
| GATATGCGGTGTCATAGCTC+TGG | 0.553528 | 1.1:+67850977 | MS.gene005890:CDS |
| AATCTTGAAAACCCTATACC+TGG | 0.556197 | 1.1:+67850131 | MS.gene005890:CDS |
| CTTTCTTTCTCAATAGCCAA+CGG | 0.560032 | 1.1:-67849313 | None:intergenic |
| TTTACAGCTAGAGACATGAA+TGG | 0.560221 | 1.1:+67851628 | MS.gene005890:CDS |
| GATGTATTGGCTGGTATATG+TGG | 0.564852 | 1.1:+67849783 | MS.gene005890:CDS |
| ATGATGGGAATGAATAGTGT+TGG | 0.567899 | 1.1:+67851811 | MS.gene005890:CDS |
| AACGTTTCTTCAGCAAGACT+CGG | 0.568747 | 1.1:+67850093 | MS.gene005890:CDS |
| AATGTTCCAGTGATGAGTTA+TGG | 0.569272 | 1.1:+67851415 | MS.gene005890:CDS |
| TTGGATAGAACGGTTTCCGA+GGG | 0.569559 | 1.1:+67850584 | MS.gene005890:CDS |
| GTCTTGGAAATGAAGTGGAA+AGG | 0.569665 | 1.1:+67850624 | MS.gene005890:CDS |
| CAGATGTTTAGAGGTAGAGA+TGG | 0.572342 | 1.1:+67851673 | MS.gene005890:CDS |
| TTCAGAAATAATTAAACCAA+GGG | 0.573712 | 1.1:+67850544 | MS.gene005890:CDS |
| GATCCTCCCACTAGAATCCC+AGG | 0.576654 | 1.1:-67851838 | None:intergenic |
| CAACTTGCAGCAGCAAGGAA+GGG | 0.578333 | 1.1:+67851786 | MS.gene005890:CDS |
| TGTCATAGCTCTGGTAGTAA+TGG | 0.581340 | 1.1:+67850986 | MS.gene005890:CDS |
| TCTTTGTCTTGGAAATGAAG+TGG | 0.581912 | 1.1:+67850619 | MS.gene005890:CDS |
| GCACCTGTATGGAATAGCCC+TGG | 0.584593 | 1.1:-67851060 | None:intergenic |
| TTCTTGGCAAAGGCCTGCAA+TGG | 0.587230 | 1.1:-67851574 | None:intergenic |
| ATCTCCAACTTGCAGCAGCA+AGG | 0.590159 | 1.1:+67851781 | MS.gene005890:CDS |
| CGGTGTCTCGGATCCTGTGG+CGG | 0.590515 | 1.1:+67851867 | MS.gene005890:CDS |
| GATGCATGTGTTGTTGAGGC+AGG | 0.590672 | 1.1:+67850209 | MS.gene005890:CDS |
| TGTAAAAGCATCAAGGGGCG+AGG | 0.596661 | 1.1:+67849692 | MS.gene005890:intron |
| TGGGCTGGTTGAAGATCCGT+TGG | 0.599359 | 1.1:+67849297 | MS.gene005890:CDS |
| CTTCAGAAATAATTAAACCA+AGG | 0.600296 | 1.1:+67850543 | MS.gene005890:CDS |
| TTGGCAAAGGCCTGCAATGG+TGG | 0.600447 | 1.1:-67851571 | None:intergenic |
| TTTGGATAGAACGGTTTCCG+AGG | 0.601407 | 1.1:+67850583 | MS.gene005890:CDS |
| ACCATCAGCTTCCTCTTTCG+GGG | 0.603742 | 1.1:+67851011 | MS.gene005890:CDS |
| TCCCTGAATATCACAAGTAG+AGG | 0.605259 | 1.1:-67850948 | None:intergenic |
| GACAGGCTCGTAGCTTCCAG+AGG | 0.607368 | 1.1:-67850320 | None:intergenic |
| AAATGTTTCATTCTCACCAG+TGG | 0.607430 | 1.1:+67850757 | MS.gene005890:CDS |
| TGTGAAATATCAGGTGTCAA+GGG | 0.607676 | 1.1:-67849912 | None:intergenic |
| CCGTTGAATGATGATGCAAA+TGG | 0.612103 | 1.1:+67850167 | MS.gene005890:CDS |
| AATGTATTCAAGGCATCAGA+AGG | 0.612851 | 1.1:-67850281 | None:intergenic |
| ATAATTAAACCAAGGGAGTG+TGG | 0.613524 | 1.1:+67850551 | MS.gene005890:CDS |
| CAGCGGTGTCTCGGATCCTG+TGG | 0.615518 | 1.1:+67851864 | MS.gene005890:CDS |
| CAAGAAAGAAGAATCGGGCA+AGG | 0.618773 | 1.1:-67851485 | None:intergenic |
| GCGAAGATATCACGGTGTGT+AGG | 0.619795 | 1.1:+67850047 | MS.gene005890:CDS |
| GATAATTACTAAACGCAGCA+GGG | 0.620460 | 1.1:-67851519 | None:intergenic |
| CCTGAACATGAATTGACCAC+TGG | 0.621141 | 1.1:-67850773 | None:intergenic |
| ATGAATCAAGAGAAATCAGT+GGG | 0.621536 | 1.1:+67850354 | MS.gene005890:CDS |
| CAAAAGGTCAAACAGACTGA+TGG | 0.622931 | 1.1:+67851151 | MS.gene005890:CDS |
| GAGACTGTTAGTGTTCTCCA+GGG | 0.628665 | 1.1:+67851043 | MS.gene005890:CDS |
| TCCAAATTGGAAGATGATGT+AGG | 0.628761 | 1.1:-67851541 | None:intergenic |
| TGATCCTGTAGATGGTAACA+AGG | 0.631294 | 1.1:+67849851 | MS.gene005890:CDS |
| TCCCCGAAAGAGGAAGCTGA+TGG | 0.643772 | 1.1:-67851012 | None:intergenic |
| TGTTGTTGAGGCAGGCTCAG+TGG | 0.652601 | 1.1:+67850217 | MS.gene005890:CDS |
| ATGTCTTGAAAATGTAGATG+TGG | 0.663001 | 1.1:+67850385 | MS.gene005890:CDS |
| TGACGTATGAGGCTTTCCAA+AGG | 0.666473 | 1.1:-67850828 | None:intergenic |
| AGATGATGCATGTGTTGTTG+AGG | 0.666528 | 1.1:+67850205 | MS.gene005890:CDS |
| TTGGCTATTGAGAAAGAAAG+GGG | 0.666838 | 1.1:+67849316 | MS.gene005890:CDS |
| AATGAATCAAGAGAAATCAG+TGG | 0.670379 | 1.1:+67850353 | MS.gene005890:CDS |
| GAACACTAACAGTCTCAACA+TGG | 0.675115 | 1.1:-67851036 | None:intergenic |
| GTCTGGAAATAAAACAGACG+AGG | 0.684383 | 1.1:+67850253 | MS.gene005890:CDS |
| TGGGAATGAATAGTGTTGGA+AGG | 0.688444 | 1.1:+67851815 | MS.gene005890:CDS |
| TCTTTGTCAACAACACATTG+GGG | 0.691202 | 1.1:-67850662 | None:intergenic |
| GCTGCGGCAAAGCTACTGAG+TGG | 0.691948 | 1.1:+67849967 | MS.gene005890:CDS |
| CCTTTGCCAAGAATAGTGAA+CGG | 0.691999 | 1.1:+67851584 | MS.gene005890:CDS |
| CTAGTGGGAGGATCGTGCAG+CGG | 0.694460 | 1.1:+67851847 | MS.gene005890:CDS |
| TTCAGGGAGGTAGAGATATG+CGG | 0.697830 | 1.1:+67850963 | MS.gene005890:CDS |
| ACTTGTTCAGATGAGAGCTG+CGG | 0.698915 | 1.1:+67849951 | MS.gene005890:CDS |
| AGGCCTGGGATTCTAGTGGG+AGG | 0.700557 | 1.1:+67851835 | MS.gene005890:CDS |
| GGTAATGTAAAAGCATCAAG+GGG | 0.700735 | 1.1:+67849687 | MS.gene005890:intron |
| TCTACTTGTGATATTCAGGG+AGG | 0.726623 | 1.1:+67850950 | MS.gene005890:CDS |
| TTGAATGATGATGCAAATGG+CGG | 0.738271 | 1.1:+67850170 | MS.gene005890:CDS |
| AGTCAAAATAGGATTCTGAG+TGG | 0.758621 | 1.1:-67851269 | None:intergenic |
| ATTTGCATCATCATTCAACG+GGG | 0.778394 | 1.1:-67850165 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TGATGAAAATTTAAATTTTT+TGG | + | chr1.1:67851378-67851397 | MS.gene005890:CDS | 10.0% |
| !!! | AATTTAAATTTTTTGGAGTT+TGG | + | chr1.1:67851385-67851404 | MS.gene005890:CDS | 15.0% |
| !! | AAATTAATAATCTCTGTTGT+TGG | - | chr1.1:67849163-67849182 | None:intergenic | 20.0% |
| !! | TTCAGAAATAATTAAACCAA+GGG | + | chr1.1:67850544-67850563 | MS.gene005890:CDS | 20.0% |
| !!! | AATTTTCATCAGAATTTTGA+TGG | - | chr1.1:67851369-67851388 | None:intergenic | 20.0% |
| ! | AACATTAATTGCACAAACAA+CGG | - | chr1.1:67850414-67850433 | None:intergenic | 25.0% |
| ! | ACAAAGTTCATATCTAGTAA+TGG | + | chr1.1:67849277-67849296 | MS.gene005890:CDS | 25.0% |
| ! | ATTAATGTTGAATCTAAGCT+AGG | + | chr1.1:67850425-67850444 | MS.gene005890:CDS | 25.0% |
| ! | CAAAGTTCATATCTAGTAAT+GGG | + | chr1.1:67849278-67849297 | MS.gene005890:CDS | 25.0% |
| ! | CTTCAGAAATAATTAAACCA+AGG | + | chr1.1:67850543-67850562 | MS.gene005890:CDS | 25.0% |
| !! | ATTCATTTAATTTAGCAGAC+AGG | - | chr1.1:67850340-67850359 | None:intergenic | 25.0% |
| !! | TCTTCTAATCTGAATTTTAC+CGG | + | chr1.1:67851343-67851362 | MS.gene005890:CDS | 25.0% |
| !!! | TACATTTTCAAGACATACTT+CGG | - | chr1.1:67850381-67850400 | None:intergenic | 25.0% |
| AATGAATCAAGAGAAATCAG+TGG | + | chr1.1:67850353-67850372 | MS.gene005890:CDS | 30.0% | |
| AGAAACGTTTACAATGTTCT+TGG | - | chr1.1:67850082-67850101 | None:intergenic | 30.0% | |
| AGCTAACAAGAAAGAAGAAT+CGG | - | chr1.1:67851494-67851513 | None:intergenic | 30.0% | |
| AGTGATGAGTTATGGTTATT+GGG | + | chr1.1:67851423-67851442 | MS.gene005890:CDS | 30.0% | |
| ATCTTTGTCAACAACACATT+GGG | - | chr1.1:67850666-67850685 | None:intergenic | 30.0% | |
| ATGAATCAAGAGAAATCAGT+GGG | + | chr1.1:67850354-67850373 | MS.gene005890:CDS | 30.0% | |
| ATGGTCATTTCAAACCATTA+TGG | + | chr1.1:67851170-67851189 | MS.gene005890:CDS | 30.0% | |
| ATGTCATTGCAGGTAATAAA+AGG | + | chr1.1:67849638-67849657 | MS.gene005890:intron | 30.0% | |
| ATGTCTTGAAAATGTAGATG+TGG | + | chr1.1:67850385-67850404 | MS.gene005890:CDS | 30.0% | |
| ATTGCAGGTAATAAAAGGAT+GGG | + | chr1.1:67849643-67849662 | MS.gene005890:intron | 30.0% | |
| CATAAAAAAAGAAGTGGATG+GGG | + | chr1.1:67851084-67851103 | MS.gene005890:CDS | 30.0% | |
| CCATAAAAAAAGAAGTGGAT+GGG | + | chr1.1:67851083-67851102 | MS.gene005890:CDS | 30.0% | |
| CTTCAGTTTCTCAAAACATT+CGG | - | chr1.1:67849488-67849507 | None:intergenic | 30.0% | |
| CTTGATTATCAGATGTTTAG+AGG | + | chr1.1:67851664-67851683 | MS.gene005890:CDS | 30.0% | |
| GAAACGTTTACAATGTTCTT+GGG | - | chr1.1:67850081-67850100 | None:intergenic | 30.0% | |
| GAATCCAAAAAATGCCATAA+TGG | - | chr1.1:67851187-67851206 | None:intergenic | 30.0% | |
| TCAAGGGTTGTTTGAATATA+GGG | - | chr1.1:67849899-67849918 | None:intergenic | 30.0% | |
| TCAGAAAAAACATCCAGAAA+TGG | + | chr1.1:67851205-67851224 | MS.gene005890:CDS | 30.0% | |
| TTCATCATGGAATGTATTCA+AGG | - | chr1.1:67850294-67850313 | None:intergenic | 30.0% | |
| !! | ATCAATTGAACTTGTTATGC+AGG | - | chr1.1:67849835-67849854 | None:intergenic | 30.0% |
| !! | ATGGTAATGTAAAAGCATCA+AGG | + | chr1.1:67849685-67849704 | MS.gene005890:intron | 30.0% |
| !! | TGGTAATGTAAAAGCATCAA+GGG | + | chr1.1:67849686-67849705 | MS.gene005890:intron | 30.0% |
| !! | TTGAAGAAATTTGCTGCATT+TGG | + | chr1.1:67849379-67849398 | MS.gene005890:CDS | 30.0% |
| !!! | AATGTTTTGAGAAACTGAAG+AGG | + | chr1.1:67849488-67849507 | MS.gene005890:CDS | 30.0% |
| !!! | CAAACCATTATGGCATTTTT+TGG | + | chr1.1:67851180-67851199 | MS.gene005890:CDS | 30.0% |
| !!! | CCATCCACTTCTTTTTTTAT+GGG | - | chr1.1:67851085-67851104 | None:intergenic | 30.0% |
| AAACTGAAGAGGAAAGATGT+TGG | + | chr1.1:67849499-67849518 | MS.gene005890:CDS | 35.0% | |
| AAATGTTTCATTCTCACCAG+TGG | + | chr1.1:67850757-67850776 | MS.gene005890:CDS | 35.0% | |
| AACCCTATACCTGGAATTAA+CGG | + | chr1.1:67850140-67850159 | MS.gene005890:CDS | 35.0% | |
| AATCTTGAAAACCCTATACC+TGG | + | chr1.1:67850131-67850150 | MS.gene005890:CDS | 35.0% | |
| AATGTTCCAGTGATGAGTTA+TGG | + | chr1.1:67851415-67851434 | MS.gene005890:CDS | 35.0% | |
| ACCATAAATGGCTGAATTTG+TGG | - | chr1.1:67851700-67851719 | None:intergenic | 35.0% | |
| AGTCAAAATAGGATTCTGAG+TGG | - | chr1.1:67851272-67851291 | None:intergenic | 35.0% | |
| AGTTCAATTGATCCTGTAGA+TGG | + | chr1.1:67849843-67849862 | MS.gene005890:CDS | 35.0% | |
| ATAATTAAACCAAGGGAGTG+TGG | + | chr1.1:67850551-67850570 | MS.gene005890:CDS | 35.0% | |
| ATCCGTTAATTCCAGGTATA+GGG | - | chr1.1:67850145-67850164 | None:intergenic | 35.0% | |
| ATGAGTTATGGTTATTGGGA+AGG | + | chr1.1:67851427-67851446 | MS.gene005890:CDS | 35.0% | |
| ATTTGCATCATCATTCAACG+GGG | - | chr1.1:67850168-67850187 | None:intergenic | 35.0% | |
| CAATAACCATAACTCATCAC+TGG | - | chr1.1:67851424-67851443 | None:intergenic | 35.0% | |
| CAGTGATGAGTTATGGTTAT+TGG | + | chr1.1:67851422-67851441 | MS.gene005890:CDS | 35.0% | |
| CATCTTTGTCAACAACACAT+TGG | - | chr1.1:67850667-67850686 | None:intergenic | 35.0% | |
| CATTGCAGGTAATAAAAGGA+TGG | + | chr1.1:67849642-67849661 | MS.gene005890:intron | 35.0% | |
| CATTTGCATCATCATTCAAC+GGG | - | chr1.1:67850169-67850188 | None:intergenic | 35.0% | |
| CCATTTGCATCATCATTCAA+CGG | - | chr1.1:67850170-67850189 | None:intergenic | 35.0% | |
| CCCATAAAAAAAGAAGTGGA+TGG | + | chr1.1:67851082-67851101 | MS.gene005890:CDS | 35.0% | |
| CTGCATTTGGAAAAGATTTC+CGG | + | chr1.1:67849392-67849411 | MS.gene005890:CDS | 35.0% | |
| CTTTCTTTCTCAATAGCCAA+CGG | - | chr1.1:67849316-67849335 | None:intergenic | 35.0% | |
| GAAAATAAGCATGTCTCCTT+TGG | + | chr1.1:67850812-67850831 | MS.gene005890:CDS | 35.0% | |
| GAAGATGCCTGCATTAATAT+TGG | + | chr1.1:67849234-67849253 | MS.gene005890:CDS | 35.0% | |
| GATAATTACTAAACGCAGCA+GGG | - | chr1.1:67851522-67851541 | None:intergenic | 35.0% | |
| GCTAACAAGAAAGAAGAATC+GGG | - | chr1.1:67851493-67851512 | None:intergenic | 35.0% | |
| GTCAAGGGTTGTTTGAATAT+AGG | - | chr1.1:67849900-67849919 | None:intergenic | 35.0% | |
| GTTAAACATATAGCAGATGC+AGG | + | chr1.1:67850686-67850705 | MS.gene005890:CDS | 35.0% | |
| GTTGGCTATTGAGAAAGAAA+GGG | + | chr1.1:67849315-67849334 | MS.gene005890:CDS | 35.0% | |
| TATTAATGCAGGCATCTTCA+AGG | - | chr1.1:67849233-67849252 | None:intergenic | 35.0% | |
| TATTCCACCAATTCTGACTT+AGG | + | chr1.1:67851904-67851923 | MS.gene005890:CDS | 35.0% | |
| TCAGCATTCTGTGAAATATC+AGG | - | chr1.1:67849924-67849943 | None:intergenic | 35.0% | |
| TCCAAATTGGAAGATGATGT+AGG | - | chr1.1:67851544-67851563 | None:intergenic | 35.0% | |
| TCCACAAATTCAGCCATTTA+TGG | + | chr1.1:67851696-67851715 | MS.gene005890:CDS | 35.0% | |
| TCCTACATCATCTTCCAATT+TGG | + | chr1.1:67851540-67851559 | MS.gene005890:CDS | 35.0% | |
| TCCTCTACTTGTGATATTCA+GGG | + | chr1.1:67850947-67850966 | MS.gene005890:CDS | 35.0% | |
| TCTCAAAACATTCGGATTTG+TGG | - | chr1.1:67849480-67849499 | None:intergenic | 35.0% | |
| TCTCAGAGAATACATCTTGT+CGG | - | chr1.1:67851735-67851754 | None:intergenic | 35.0% | |
| TCTTTGTCAACAACACATTG+GGG | - | chr1.1:67850665-67850684 | None:intergenic | 35.0% | |
| TCTTTGTCTTGGAAATGAAG+TGG | + | chr1.1:67850619-67850638 | MS.gene005890:CDS | 35.0% | |
| TGAGTTATGGTTATTGGGAA+GGG | + | chr1.1:67851428-67851447 | MS.gene005890:CDS | 35.0% | |
| TGATGGCATCAGGTAAAAAA+TGG | + | chr1.1:67849557-67849576 | MS.gene005890:intron | 35.0% | |
| TGCAGCTAAAACTAACTTGA+TGG | + | chr1.1:67849540-67849559 | MS.gene005890:CDS | 35.0% | |
| TGCATTAATATTGGACGAGA+AGG | + | chr1.1:67849243-67849262 | MS.gene005890:CDS | 35.0% | |
| TGTGAAATATCAGGTGTCAA+GGG | - | chr1.1:67849915-67849934 | None:intergenic | 35.0% | |
| TGTTGGACATCAACCATAAA+TGG | - | chr1.1:67851712-67851731 | None:intergenic | 35.0% | |
| TTCTCGTCCAATATTAATGC+AGG | - | chr1.1:67849244-67849263 | None:intergenic | 35.0% | |
| TTGGCTATTGAGAAAGAAAG+GGG | + | chr1.1:67849316-67849335 | MS.gene005890:CDS | 35.0% | |
| TTTACAGCTAGAGACATGAA+TGG | + | chr1.1:67851628-67851647 | MS.gene005890:CDS | 35.0% | |
| ! | AAAACTAACTTGATGGCATC+AGG | + | chr1.1:67849547-67849566 | MS.gene005890:CDS | 35.0% |
| ! | AATGTATTCAAGGCATCAGA+AGG | - | chr1.1:67850284-67850303 | None:intergenic | 35.0% |
| ! | AGGATTTTGCGAAGATATCA+CGG | + | chr1.1:67850039-67850058 | MS.gene005890:CDS | 35.0% |
| ! | ATCAGTCTGTTTGACCTTTT+GGG | - | chr1.1:67851152-67851171 | None:intergenic | 35.0% |
| ! | ATGATGGGAATGAATAGTGT+TGG | + | chr1.1:67851811-67851830 | MS.gene005890:CDS | 35.0% |
| ! | ATGTGGTTCATTTTCATCTG+AGG | + | chr1.1:67849800-67849819 | MS.gene005890:CDS | 35.0% |
| ! | CAAGGAAAGAAGCAATTTTC+CGG | - | chr1.1:67849414-67849433 | None:intergenic | 35.0% |
| ! | TCATCACTGGAACATTTTCA+AGG | - | chr1.1:67851411-67851430 | None:intergenic | 35.0% |
| ! | TCATGTTCAGGATTGAGTTT+TGG | + | chr1.1:67850785-67850804 | MS.gene005890:CDS | 35.0% |
| ! | TTGAATGATGATGCAAATGG+CGG | + | chr1.1:67850170-67850189 | MS.gene005890:CDS | 35.0% |
| !! | AAACAGTTTTGACACTCTAG+GGG | + | chr1.1:67849734-67849753 | MS.gene005890:CDS | 35.0% |
| !! | AGAAGACTTGTTGTTCAACT+TGG | - | chr1.1:67851329-67851348 | None:intergenic | 35.0% |
| !! | CAAACAGTTTTGACACTCTA+GGG | + | chr1.1:67849733-67849752 | MS.gene005890:CDS | 35.0% |
| !! | GAAGACTTGTTGTTCAACTT+GGG | - | chr1.1:67851328-67851347 | None:intergenic | 35.0% |
| !! | GGTAATGTAAAAGCATCAAG+GGG | + | chr1.1:67849687-67849706 | MS.gene005890:intron | 35.0% |
| !! | TCAAACAGTTTTGACACTCT+AGG | + | chr1.1:67849732-67849751 | MS.gene005890:CDS | 35.0% |
| !! | TTCATCAGAATTTTGATGGC+CGG | - | chr1.1:67851365-67851384 | None:intergenic | 35.0% |
| !! | TTCTGTTGCTTTGGATAGAA+CGG | + | chr1.1:67850574-67850593 | MS.gene005890:CDS | 35.0% |
| !!! | CCCATCCACTTCTTTTTTTA+TGG | - | chr1.1:67851086-67851105 | None:intergenic | 35.0% |
| !!! | TTTTTTTATGGGCACCTGTA+TGG | - | chr1.1:67851074-67851093 | None:intergenic | 35.0% |
| AACGTTTCTTCAGCAAGACT+CGG | + | chr1.1:67850093-67850112 | MS.gene005890:CDS | 40.0% | |
| AATAGTGAACGGCATTTGAC+TGG | + | chr1.1:67851595-67851614 | MS.gene005890:CDS | 40.0% | |
| ACTGTCTATGAGTGATCTTC+AGG | + | chr1.1:67850853-67850872 | MS.gene005890:CDS | 40.0% | |
| AGAATACATCTTGTCGGTGT+TGG | - | chr1.1:67851729-67851748 | None:intergenic | 40.0% | |
| ATAGGATTCTGAGTGGAAGA+TGG | - | chr1.1:67851265-67851284 | None:intergenic | 40.0% | |
| ATGTGAGAAAACAGTTAGCC+AGG | + | chr1.1:67850916-67850935 | MS.gene005890:CDS | 40.0% | |
| ATTCTGAGTGGAAGATGGAT+TGG | - | chr1.1:67851260-67851279 | None:intergenic | 40.0% | |
| CAAAAGGTCAAACAGACTGA+TGG | + | chr1.1:67851151-67851170 | MS.gene005890:CDS | 40.0% | |
| CAAATGCCGTTCACTATTCT+TGG | - | chr1.1:67851593-67851612 | None:intergenic | 40.0% | |
| CAGATGTTTAGAGGTAGAGA+TGG | + | chr1.1:67851673-67851692 | MS.gene005890:CDS | 40.0% | |
| CCTTTGCCAAGAATAGTGAA+CGG | + | chr1.1:67851584-67851603 | MS.gene005890:CDS | 40.0% | |
| CTGTGAAATATCAGGTGTCA+AGG | - | chr1.1:67849916-67849935 | None:intergenic | 40.0% | |
| GAACACTAACAGTCTCAACA+TGG | - | chr1.1:67851039-67851058 | None:intergenic | 40.0% | |
| GATCCGTTAATTCCAGGTAT+AGG | - | chr1.1:67850146-67850165 | None:intergenic | 40.0% | |
| GCAATACAAAGTAGACAGTC+TGG | + | chr1.1:67851454-67851473 | MS.gene005890:CDS | 40.0% | |
| GGATAATTACTAAACGCAGC+AGG | - | chr1.1:67851523-67851542 | None:intergenic | 40.0% | |
| GGTGCCCATAAAAAAAGAAG+TGG | + | chr1.1:67851078-67851097 | MS.gene005890:CDS | 40.0% | |
| GTCCTCTACTTGTGATATTC+AGG | + | chr1.1:67850946-67850965 | MS.gene005890:CDS | 40.0% | |
| GTCTGGAAATAAAACAGACG+AGG | + | chr1.1:67850253-67850272 | MS.gene005890:CDS | 40.0% | |
| GTCTTGGAAATGAAGTGGAA+AGG | + | chr1.1:67850624-67850643 | MS.gene005890:CDS | 40.0% | |
| GTTGTTCAACTTGGGATGAT+GGG | - | chr1.1:67851320-67851339 | None:intergenic | 40.0% | |
| GTTTCCTTGTTACCATCTAC+AGG | - | chr1.1:67849858-67849877 | None:intergenic | 40.0% | |
| TCCCTGAATATCACAAGTAG+AGG | - | chr1.1:67850951-67850970 | None:intergenic | 40.0% | |
| TCTACTTGTGATATTCAGGG+AGG | + | chr1.1:67850950-67850969 | MS.gene005890:CDS | 40.0% | |
| TCTTTCTCTTCTGATGTCCA+AGG | - | chr1.1:67849352-67849371 | None:intergenic | 40.0% | |
| TGATCCTGTAGATGGTAACA+AGG | + | chr1.1:67849851-67849870 | MS.gene005890:CDS | 40.0% | |
| TGTTGTTCAACTTGGGATGA+TGG | - | chr1.1:67851321-67851340 | None:intergenic | 40.0% | |
| TTGTTGGAACCAAGCTTAGA+TGG | - | chr1.1:67849147-67849166 | None:intergenic | 40.0% | |
| ! | AAAGGGGTATGATCAATCCT+TGG | + | chr1.1:67849332-67849351 | MS.gene005890:CDS | 40.0% |
| ! | AATGGTGACGTGAAACTGTT+TGG | + | chr1.1:67851223-67851242 | MS.gene005890:CDS | 40.0% |
| ! | AGATGATGCATGTGTTGTTG+AGG | + | chr1.1:67850205-67850224 | MS.gene005890:CDS | 40.0% |
| ! | AGGAAAGATGTTGGTAAGCT+AGG | + | chr1.1:67849508-67849527 | MS.gene005890:CDS | 40.0% |
| ! | CATCAGTCTGTTTGACCTTT+TGG | - | chr1.1:67851153-67851172 | None:intergenic | 40.0% |
| ! | CCGTTGAATGATGATGCAAA+TGG | + | chr1.1:67850167-67850186 | MS.gene005890:CDS | 40.0% |
| ! | CGTTGGCTATTGAGAAAGAA+AGG | + | chr1.1:67849314-67849333 | MS.gene005890:CDS | 40.0% |
| ! | CTTCAGGCTGTATCATCTTT+TGG | + | chr1.1:67850014-67850033 | MS.gene005890:CDS | 40.0% |
| ! | GGAAAGATGTTGGTAAGCTA+GGG | + | chr1.1:67849509-67849528 | MS.gene005890:CDS | 40.0% |
| ! | TCAGTCTGTTTGACCTTTTG+GGG | - | chr1.1:67851151-67851170 | None:intergenic | 40.0% |
| ! | TGGGAATGAATAGTGTTGGA+AGG | + | chr1.1:67851815-67851834 | MS.gene005890:CDS | 40.0% |
| ! | TGTTTTCTCACATTGAGCAG+CGG | - | chr1.1:67850909-67850928 | None:intergenic | 40.0% |
| !! | AGGAAGATTCTTCTGGGATA+TGG | + | chr1.1:67849666-67849685 | MS.gene005890:intron | 40.0% |
| !! | GATGTATTGGCTGGTATATG+TGG | + | chr1.1:67849783-67849802 | MS.gene005890:CDS | 40.0% |
| !! | GTTCATATCTAGTAATGGGC+TGG | + | chr1.1:67849282-67849301 | MS.gene005890:CDS | 40.0% |
| !! | TGTCATAGCTCTGGTAGTAA+TGG | + | chr1.1:67850986-67851005 | MS.gene005890:CDS | 40.0% |
| AAAGAAGAATCGGGCAAGGA+TGG | - | chr1.1:67851484-67851503 | None:intergenic | 45.0% | |
| AAGAAGAATCGGGCAAGGAT+GGG | - | chr1.1:67851483-67851502 | None:intergenic | 45.0% | |
| ACTTGTTCAGATGAGAGCTG+CGG | + | chr1.1:67849951-67849970 | MS.gene005890:CDS | 45.0% | |
| AGCAAGACTCGGAAATGTCT+TGG | + | chr1.1:67850104-67850123 | MS.gene005890:CDS | 45.0% | |
| AGCTGGAAACCATCTAAGCT+TGG | + | chr1.1:67849135-67849154 | MS.gene005890:CDS | 45.0% | |
| ATTGGACGAGAAGGAGAAGA+TGG | + | chr1.1:67849252-67849271 | MS.gene005890:CDS | 45.0% | |
| CAAGAAAGAAGAATCGGGCA+AGG | - | chr1.1:67851488-67851507 | None:intergenic | 45.0% | |
| CAGTTTCACGTCACCATTTC+TGG | - | chr1.1:67851221-67851240 | None:intergenic | 45.0% | |
| CCAGAGGATTGGATTCATCA+TGG | - | chr1.1:67850307-67850326 | None:intergenic | 45.0% | |
| CCAGTGGTCAATTCATGTTC+AGG | + | chr1.1:67850773-67850792 | MS.gene005890:CDS | 45.0% | |
| CCATGATGAATCCAATCCTC+TGG | + | chr1.1:67850304-67850323 | MS.gene005890:CDS | 45.0% | |
| CCGTTCACTATTCTTGGCAA+AGG | - | chr1.1:67851587-67851606 | None:intergenic | 45.0% | |
| CCTGAACATGAATTGACCAC+TGG | - | chr1.1:67850776-67850795 | None:intergenic | 45.0% | |
| CTACCTGCCTAAGTCAGAAT+TGG | - | chr1.1:67851914-67851933 | None:intergenic | 45.0% | |
| CTGCAGTTGTCTTGTGATCA+AGG | - | chr1.1:67849432-67849451 | None:intergenic | 45.0% | |
| CTTCGCTTCGCAGTCAAAAT+AGG | - | chr1.1:67851283-67851302 | None:intergenic | 45.0% | |
| GAGACTGTTAGTGTTCTCCA+GGG | + | chr1.1:67851043-67851062 | MS.gene005890:CDS | 45.0% | |
| GATGGGAGGAAGATTCTTCT+GGG | + | chr1.1:67849660-67849679 | MS.gene005890:intron | 45.0% | |
| GCAGGTAATAAAAGGATGGG+AGG | + | chr1.1:67849646-67849665 | MS.gene005890:intron | 45.0% | |
| GTTTCCTCTTCTACCCCAAA+AGG | + | chr1.1:67851135-67851154 | MS.gene005890:CDS | 45.0% | |
| TGACCATCAGCTTCCTCTTT+CGG | + | chr1.1:67851009-67851028 | MS.gene005890:CDS | 45.0% | |
| TGACGTATGAGGCTTTCCAA+AGG | - | chr1.1:67850831-67850850 | None:intergenic | 45.0% | |
| TGAGACTGTTAGTGTTCTCC+AGG | + | chr1.1:67851042-67851061 | MS.gene005890:CDS | 45.0% | |
| TGGTGGTTGTTGCTCCAAAT+TGG | - | chr1.1:67851557-67851576 | None:intergenic | 45.0% | |
| TTCAGGGAGGTAGAGATATG+CGG | + | chr1.1:67850963-67850982 | MS.gene005890:CDS | 45.0% | |
| TTCAGTCAATGGAGTTGGCT+TGG | + | chr1.1:67850493-67850512 | MS.gene005890:CDS | 45.0% | |
| TTGGATAGAACGGTTTCCGA+GGG | + | chr1.1:67850584-67850603 | MS.gene005890:CDS | 45.0% | |
| TTGTGCACAACAGACAAGTC+TGG | + | chr1.1:67850470-67850489 | MS.gene005890:CDS | 45.0% | |
| TTTGGATAGAACGGTTTCCG+AGG | + | chr1.1:67850583-67850602 | MS.gene005890:CDS | 45.0% | |
| ! | AAGCTAGGCTCTGATGTTAG+TGG | + | chr1.1:67850440-67850459 | MS.gene005890:CDS | 45.0% |
| ! | ATGAATAGTGTTGGAAGGCC+TGG | + | chr1.1:67851820-67851839 | MS.gene005890:CDS | 45.0% |
| ! | GACAAGTCTGGTTCAGTCAA+TGG | + | chr1.1:67850482-67850501 | MS.gene005890:CDS | 45.0% |
| ! | GGCTGTATCATCTTTTGGCA+AGG | + | chr1.1:67850019-67850038 | MS.gene005890:CDS | 45.0% |
| ! | GTGGTTGATGCTGATAAGTC+TGG | + | chr1.1:67850236-67850255 | MS.gene005890:CDS | 45.0% |
| ! | TATTCAAGGCATCAGAAGGC+AGG | - | chr1.1:67850280-67850299 | None:intergenic | 45.0% |
| ! | TCAGTCAATGGAGTTGGCTT+GGG | + | chr1.1:67850494-67850513 | MS.gene005890:CDS | 45.0% |
| ! | TCTGGTTCAGTCAATGGAGT+TGG | + | chr1.1:67850488-67850507 | MS.gene005890:CDS | 45.0% |
| ! | TGAATAGTGTTGGAAGGCCT+GGG | + | chr1.1:67851821-67851840 | MS.gene005890:CDS | 45.0% |
| ! | TGACACTCTAGGGGATGAAA+GGG | + | chr1.1:67849743-67849762 | MS.gene005890:CDS | 45.0% |
| ! | TGAGACAGCAGCTTTTCTTC+AGG | + | chr1.1:67849998-67850017 | MS.gene005890:CDS | 45.0% |
| ! | TTGACACTCTAGGGGATGAA+AGG | + | chr1.1:67849742-67849761 | MS.gene005890:CDS | 45.0% |
| !! | ATAGACAGTGCTGACGTATG+AGG | - | chr1.1:67850842-67850861 | None:intergenic | 45.0% |
| !! | TTTGAGTGCTGCTTCAGTGA+TGG | + | chr1.1:67849612-67849631 | MS.gene005890:intron | 45.0% |
| !!! | TGCATTTTAATTGCCGCCAC+AGG | - | chr1.1:67851883-67851902 | None:intergenic | 45.0% |
| !!! | TTGACCTTTTGGGGTAGAAG+AGG | - | chr1.1:67851142-67851161 | None:intergenic | 45.0% |
| AACGGGGATCCGTTAATTCC+AGG | - | chr1.1:67850152-67850171 | None:intergenic | 50.0% | |
| AACTTGCAGCAGCAAGGAAG+GGG | + | chr1.1:67851787-67851806 | MS.gene005890:CDS | 50.0% | |
| AAGTAGAGGACAGTCGATCC+TGG | - | chr1.1:67850937-67850956 | None:intergenic | 50.0% | |
| ACCATCAGCTTCCTCTTTCG+GGG | + | chr1.1:67851011-67851030 | MS.gene005890:CDS | 50.0% | |
| ATCTCCAACTTGCAGCAGCA+AGG | + | chr1.1:67851781-67851800 | MS.gene005890:CDS | 50.0% | |
| CAACTTGCAGCAGCAAGGAA+GGG | + | chr1.1:67851786-67851805 | MS.gene005890:CDS | 50.0% | |
| CAGCAAGGAAGGGGAATGAT+GGG | + | chr1.1:67851796-67851815 | MS.gene005890:CDS | 50.0% | |
| CCACCAATTCTGACTTAGGC+AGG | + | chr1.1:67851908-67851927 | MS.gene005890:CDS | 50.0% | |
| CCTGCCTAAGTCAGAATTGG+TGG | - | chr1.1:67851911-67851930 | None:intergenic | 50.0% | |
| GACCATCAGCTTCCTCTTTC+GGG | + | chr1.1:67851010-67851029 | MS.gene005890:CDS | 50.0% | |
| GCGAAGATATCACGGTGTGT+AGG | + | chr1.1:67850047-67850066 | MS.gene005890:CDS | 50.0% | |
| GGATGGGAGGAAGATTCTTC+TGG | + | chr1.1:67849659-67849678 | MS.gene005890:intron | 50.0% | |
| GTGATGGCAGATGTCATTGC+AGG | + | chr1.1:67849628-67849647 | MS.gene005890:intron | 50.0% | |
| TCTCCAGGGCTATTCCATAC+AGG | + | chr1.1:67851057-67851076 | MS.gene005890:CDS | 50.0% | |
| TGCTGCTGCAGCTGATGTAT+TGG | + | chr1.1:67849770-67849789 | MS.gene005890:CDS | 50.0% | |
| TTCTTGGCAAAGGCCTGCAA+TGG | - | chr1.1:67851577-67851596 | None:intergenic | 50.0% | |
| ! | GATGCATGTGTTGTTGAGGC+AGG | + | chr1.1:67850209-67850228 | MS.gene005890:CDS | 50.0% |
| ! | GGAGTGTGGTTCTGTTGCTT+TGG | + | chr1.1:67850565-67850584 | MS.gene005890:CDS | 50.0% |
| ! | GGCTCTGATGTTAGTGGAGT+TGG | + | chr1.1:67850446-67850465 | MS.gene005890:CDS | 50.0% |
| ! | TCTTCTGGGGGTCTTTGTCT+TGG | + | chr1.1:67850608-67850627 | MS.gene005890:CDS | 50.0% |
| !! | GATATGCGGTGTCATAGCTC+TGG | + | chr1.1:67850977-67850996 | MS.gene005890:CDS | 50.0% |
| !! | TGTAAAAGCATCAAGGGGCG+AGG | + | chr1.1:67849692-67849711 | MS.gene005890:intron | 50.0% |
| AAGACCCCCAGAAGAACCCT+CGG | - | chr1.1:67850603-67850622 | None:intergenic | 55.0% | |
| ACGGTTTCCGAGGGTTCTTC+TGG | + | chr1.1:67850593-67850612 | MS.gene005890:CDS | 55.0% | |
| CCAACTTGCAGCAGCAAGGA+AGG | + | chr1.1:67851785-67851804 | MS.gene005890:CDS | 55.0% | |
| CCTTCCTTGCTGCTGCAAGT+TGG | - | chr1.1:67851788-67851807 | None:intergenic | 55.0% | |
| CGGTTTCCGAGGGTTCTTCT+GGG | + | chr1.1:67850594-67850613 | MS.gene005890:CDS | 55.0% | |
| GATCCTCCCACTAGAATCCC+AGG | - | chr1.1:67851841-67851860 | None:intergenic | 55.0% | |
| GCAACAGAACCACACTCCCT+TGG | - | chr1.1:67850563-67850582 | None:intergenic | 55.0% | |
| GCACCTGTATGGAATAGCCC+TGG | - | chr1.1:67851063-67851082 | None:intergenic | 55.0% | |
| GCAGCAAGGAAGGGGAATGA+TGG | + | chr1.1:67851795-67851814 | MS.gene005890:CDS | 55.0% | |
| GCTCGTAGCTTCCAGAGGAT+TGG | - | chr1.1:67850318-67850337 | None:intergenic | 55.0% | |
| GGAAGGCCTGGGATTCTAGT+GGG | + | chr1.1:67851832-67851851 | MS.gene005890:CDS | 55.0% | |
| GGAGCAACAACCACCATTGC+AGG | + | chr1.1:67851561-67851580 | MS.gene005890:CDS | 55.0% | |
| GGTTTCCGAGGGTTCTTCTG+GGG | + | chr1.1:67850595-67850614 | MS.gene005890:CDS | 55.0% | |
| GTTTCCGAGGGTTCTTCTGG+GGG | + | chr1.1:67850596-67850615 | MS.gene005890:CDS | 55.0% | |
| TCAACATGGCTCCCCGAAAG+AGG | - | chr1.1:67851025-67851044 | None:intergenic | 55.0% | |
| TCCCCGAAAGAGGAAGCTGA+TGG | - | chr1.1:67851015-67851034 | None:intergenic | 55.0% | |
| TGGAAGGCCTGGGATTCTAG+TGG | + | chr1.1:67851831-67851850 | MS.gene005890:CDS | 55.0% | |
| TGTTGTTGAGGCAGGCTCAG+TGG | + | chr1.1:67850217-67850236 | MS.gene005890:CDS | 55.0% | |
| TTGGCAAAGGCCTGCAATGG+TGG | - | chr1.1:67851574-67851593 | None:intergenic | 55.0% | |
| ! | GCTGCAGCTGATGTATTGGC+TGG | + | chr1.1:67849774-67849793 | MS.gene005890:CDS | 55.0% |
| !! | GTCAATGGAGTTGGCTTGGG+AGG | + | chr1.1:67850497-67850516 | MS.gene005890:CDS | 55.0% |
| !! | TGGGCTGGTTGAAGATCCGT+TGG | + | chr1.1:67849297-67849316 | MS.gene005890:CDS | 55.0% |
| AGGATCGTGCAGCGGTGTCT+CGG | + | chr1.1:67851855-67851874 | MS.gene005890:CDS | 60.0% | |
| AGGCCTGGGATTCTAGTGGG+AGG | + | chr1.1:67851835-67851854 | MS.gene005890:CDS | 60.0% | |
| CTAGTGGGAGGATCGTGCAG+CGG | + | chr1.1:67851847-67851866 | MS.gene005890:CDS | 60.0% | |
| GACAGGCTCGTAGCTTCCAG+AGG | - | chr1.1:67850323-67850342 | None:intergenic | 60.0% | |
| GCTGCGGCAAAGCTACTGAG+TGG | + | chr1.1:67849967-67849986 | MS.gene005890:CDS | 60.0% | |
| CAGCGGTGTCTCGGATCCTG+TGG | + | chr1.1:67851864-67851883 | MS.gene005890:CDS | 65.0% | |
| CGGTGTCTCGGATCCTGTGG+CGG | + | chr1.1:67851867-67851886 | MS.gene005890:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 67849127 | 67851933 | 67849127 | ID=MS.gene005890 |
| chr1.1 | mRNA | 67849127 | 67851933 | 67849127 | ID=MS.gene005890.t1;Parent=MS.gene005890 |
| chr1.1 | exon | 67849127 | 67849568 | 67849127 | ID=MS.gene005890.t1.exon1;Parent=MS.gene005890.t1 |
| chr1.1 | CDS | 67849127 | 67849568 | 67849127 | ID=cds.MS.gene005890.t1;Parent=MS.gene005890.t1 |
| chr1.1 | exon | 67849700 | 67851933 | 67849700 | ID=MS.gene005890.t1.exon2;Parent=MS.gene005890.t1 |
| chr1.1 | CDS | 67849700 | 67851933 | 67849700 | ID=cds.MS.gene005890.t1;Parent=MS.gene005890.t1 |
| Gene Sequence |
| Protein sequence |
