Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005965.t1 | RHN81490.1 | 69.1 | 619 | 10 | 1 | 1 | 438 | 76 | 694 | 4.20E-233 | 817 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005965.t1 | Q93YR9 | 66.1 | 386 | 116 | 5 | 1 | 378 | 1 | 379 | 3.7e-145 | 516.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005965.t1 | G7I382 | 69.1 | 619 | 10 | 1 | 1 | 438 | 1 | 619 | 3.0e-233 | 817.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene005965.t1 | TF | B3-ARF |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005965.t1 | MTR_1g094960 | 98.413 | 378 | 6 | 0 | 1 | 378 | 1 | 378 | 0.0 | 793 |
| MS.gene005965.t1 | MTR_1g094960 | 94.915 | 59 | 3 | 0 | 380 | 438 | 561 | 619 | 8.15e-26 | 110 |
| MS.gene005965.t1 | MTR_2g094570 | 68.984 | 374 | 107 | 4 | 10 | 378 | 2 | 371 | 0.0 | 522 |
| MS.gene005965.t1 | MTR_2g094570 | 68.984 | 374 | 107 | 4 | 10 | 378 | 2 | 371 | 0.0 | 521 |
| MS.gene005965.t1 | MTR_2g094570 | 68.984 | 374 | 107 | 4 | 10 | 378 | 58 | 427 | 1.66e-180 | 522 |
| MS.gene005965.t1 | MTR_4g058930 | 69.291 | 381 | 104 | 8 | 8 | 378 | 1 | 378 | 6.70e-177 | 510 |
| MS.gene005965.t1 | MTR_4g058930 | 69.291 | 381 | 104 | 8 | 8 | 378 | 1 | 378 | 1.75e-176 | 510 |
| MS.gene005965.t1 | MTR_1g064430 | 64.829 | 381 | 113 | 6 | 13 | 378 | 21 | 395 | 9.51e-169 | 490 |
| MS.gene005965.t1 | MTR_1g064430 | 64.829 | 381 | 113 | 6 | 13 | 378 | 34 | 408 | 1.64e-168 | 490 |
| MS.gene005965.t1 | MTR_7g101280 | 58.701 | 385 | 139 | 8 | 10 | 378 | 22 | 402 | 1.18e-150 | 442 |
| MS.gene005965.t1 | MTR_0041s0110 | 58.701 | 385 | 139 | 8 | 10 | 378 | 22 | 402 | 1.18e-150 | 442 |
| MS.gene005965.t1 | MTR_7g101275 | 54.252 | 341 | 120 | 4 | 28 | 367 | 1 | 306 | 8.88e-126 | 370 |
| MS.gene005965.t1 | MTR_0041s0120 | 53.666 | 341 | 134 | 6 | 28 | 367 | 1 | 318 | 2.87e-119 | 354 |
| MS.gene005965.t1 | MTR_3g073420 | 46.543 | 376 | 173 | 6 | 16 | 378 | 16 | 376 | 1.16e-105 | 325 |
| MS.gene005965.t1 | MTR_5g061220 | 42.448 | 384 | 182 | 10 | 7 | 378 | 7 | 363 | 1.03e-89 | 282 |
| MS.gene005965.t1 | MTR_2g024430 | 40.533 | 375 | 149 | 9 | 16 | 374 | 17 | 333 | 1.03e-80 | 258 |
| MS.gene005965.t1 | MTR_4g124900 | 40.720 | 361 | 167 | 9 | 14 | 366 | 18 | 339 | 1.55e-80 | 269 |
| MS.gene005965.t1 | MTR_4g124900 | 40.720 | 361 | 167 | 9 | 14 | 366 | 18 | 339 | 2.02e-80 | 269 |
| MS.gene005965.t1 | MTR_5g076270 | 40.599 | 367 | 171 | 8 | 9 | 366 | 14 | 342 | 4.55e-80 | 264 |
| MS.gene005965.t1 | MTR_2g014770 | 38.734 | 395 | 188 | 9 | 15 | 398 | 51 | 402 | 9.43e-80 | 258 |
| MS.gene005965.t1 | MTR_2g014770 | 38.734 | 395 | 188 | 9 | 15 | 398 | 51 | 402 | 6.26e-79 | 258 |
| MS.gene005965.t1 | MTR_5g040880 | 39.211 | 380 | 164 | 9 | 11 | 378 | 3 | 327 | 6.72e-79 | 254 |
| MS.gene005965.t1 | MTR_3g064050 | 40.220 | 363 | 170 | 8 | 13 | 366 | 20 | 344 | 2.58e-77 | 257 |
| MS.gene005965.t1 | MTR_2g018690 | 39.344 | 366 | 177 | 7 | 9 | 366 | 13 | 341 | 1.41e-76 | 256 |
| MS.gene005965.t1 | MTR_4g088210 | 39.747 | 395 | 186 | 11 | 12 | 394 | 33 | 387 | 2.07e-76 | 252 |
| MS.gene005965.t1 | MTR_4g088210 | 39.747 | 395 | 186 | 11 | 12 | 394 | 33 | 387 | 2.50e-76 | 252 |
| MS.gene005965.t1 | MTR_8g079492 | 38.904 | 365 | 179 | 7 | 9 | 366 | 13 | 340 | 2.57e-75 | 253 |
| MS.gene005965.t1 | MTR_8g079492 | 38.904 | 365 | 179 | 7 | 9 | 366 | 13 | 340 | 2.65e-75 | 253 |
| MS.gene005965.t1 | MTR_1g024025 | 40.659 | 364 | 166 | 10 | 14 | 367 | 38 | 361 | 9.09e-74 | 251 |
| MS.gene005965.t1 | MTR_2g043250 | 39.167 | 360 | 174 | 8 | 14 | 366 | 18 | 339 | 5.53e-73 | 248 |
| MS.gene005965.t1 | MTR_5g082140 | 37.533 | 381 | 179 | 8 | 8 | 378 | 1 | 332 | 9.55e-73 | 236 |
| MS.gene005965.t1 | MTR_5g040740 | 38.978 | 372 | 156 | 9 | 16 | 372 | 9 | 324 | 1.80e-72 | 234 |
| MS.gene005965.t1 | MTR_2g093740 | 39.782 | 367 | 162 | 8 | 19 | 366 | 56 | 382 | 3.82e-72 | 240 |
| MS.gene005965.t1 | MTR_2g093740 | 39.782 | 367 | 162 | 8 | 19 | 366 | 56 | 382 | 1.36e-71 | 240 |
| MS.gene005965.t1 | MTR_2g093740 | 39.782 | 367 | 162 | 8 | 19 | 366 | 56 | 382 | 2.63e-71 | 240 |
| MS.gene005965.t1 | MTR_1g058210 | 36.074 | 377 | 192 | 6 | 8 | 378 | 1 | 334 | 2.99e-71 | 232 |
| MS.gene005965.t1 | MTR_8g101360 | 39.402 | 368 | 174 | 8 | 9 | 366 | 21 | 349 | 3.04e-70 | 241 |
| MS.gene005965.t1 | MTR_8g100050 | 37.401 | 377 | 189 | 7 | 10 | 378 | 50 | 387 | 2.17e-69 | 233 |
| MS.gene005965.t1 | MTR_8g100050 | 37.401 | 377 | 189 | 7 | 10 | 378 | 50 | 387 | 5.69e-69 | 234 |
| MS.gene005965.t1 | MTR_4g060460 | 38.564 | 376 | 154 | 9 | 19 | 366 | 54 | 380 | 1.04e-68 | 233 |
| MS.gene005965.t1 | MTR_4g060460 | 38.564 | 376 | 154 | 9 | 19 | 366 | 54 | 380 | 1.27e-68 | 233 |
| MS.gene005965.t1 | MTR_2g093740 | 38.421 | 380 | 162 | 9 | 19 | 366 | 56 | 395 | 1.91e-68 | 231 |
| MS.gene005965.t1 | MTR_2g093740 | 38.421 | 380 | 162 | 9 | 19 | 366 | 56 | 395 | 7.16e-68 | 230 |
| MS.gene005965.t1 | MTR_2g093740 | 38.421 | 380 | 162 | 9 | 19 | 366 | 56 | 395 | 1.28e-67 | 230 |
| MS.gene005965.t1 | MTR_2g005240 | 36.939 | 379 | 185 | 7 | 11 | 378 | 15 | 350 | 3.36e-66 | 224 |
| MS.gene005965.t1 | MTR_2g006270 | 36.413 | 368 | 178 | 11 | 19 | 378 | 13 | 332 | 2.61e-65 | 216 |
| MS.gene005965.t1 | MTR_4g021580 | 38.235 | 374 | 178 | 10 | 15 | 378 | 15 | 345 | 4.08e-65 | 220 |
| MS.gene005965.t1 | MTR_4g021580 | 38.235 | 374 | 178 | 10 | 15 | 378 | 15 | 345 | 5.88e-65 | 221 |
| MS.gene005965.t1 | MTR_8g027440 | 39.444 | 360 | 166 | 10 | 16 | 366 | 26 | 342 | 2.47e-59 | 206 |
| MS.gene005965.t1 | MTR_7g062540 | 36.927 | 371 | 179 | 10 | 8 | 367 | 3 | 329 | 6.28e-59 | 204 |
| MS.gene005965.t1 | MTR_8g079492 | 39.932 | 293 | 138 | 5 | 75 | 366 | 3 | 258 | 3.54e-58 | 204 |
| MS.gene005965.t1 | MTR_2g006380 | 33.773 | 379 | 181 | 13 | 19 | 384 | 20 | 341 | 3.09e-55 | 190 |
| MS.gene005965.t1 | MTR_5g061890 | 34.946 | 372 | 184 | 14 | 16 | 378 | 9 | 331 | 6.61e-54 | 185 |
| MS.gene005965.t1 | MTR_5g060780 | 34.677 | 372 | 185 | 14 | 16 | 378 | 9 | 331 | 9.75e-54 | 184 |
| MS.gene005965.t1 | MTR_2g093740 | 42.400 | 250 | 108 | 3 | 118 | 366 | 38 | 252 | 2.57e-53 | 188 |
| MS.gene005965.t1 | MTR_2g093740 | 42.400 | 250 | 108 | 3 | 118 | 366 | 38 | 252 | 4.37e-53 | 189 |
| MS.gene005965.t1 | MTR_5g460920 | 34.140 | 372 | 187 | 13 | 16 | 378 | 9 | 331 | 9.02e-53 | 182 |
| MS.gene005965.t1 | MTR_2g093740 | 40.304 | 263 | 108 | 4 | 118 | 366 | 38 | 265 | 1.17e-49 | 178 |
| MS.gene005965.t1 | MTR_2g093740 | 40.304 | 263 | 108 | 4 | 118 | 366 | 38 | 265 | 1.65e-49 | 179 |
| MS.gene005965.t1 | MTR_5g062970 | 40.796 | 201 | 100 | 3 | 16 | 206 | 35 | 226 | 2.01e-47 | 163 |
| MS.gene005965.t1 | MTR_8g446900 | 31.902 | 326 | 180 | 7 | 53 | 378 | 1 | 284 | 3.91e-45 | 161 |
| MS.gene005965.t1 | MTR_5g060630 | 32.250 | 400 | 192 | 16 | 16 | 378 | 9 | 366 | 1.33e-43 | 160 |
| MS.gene005965.t1 | MTR_5g460740 | 32.250 | 400 | 192 | 16 | 16 | 378 | 9 | 366 | 1.33e-43 | 160 |
| MS.gene005965.t1 | MTR_5g060770 | 34.667 | 150 | 87 | 4 | 63 | 212 | 6 | 144 | 8.74e-18 | 84.7 |
| MS.gene005965.t1 | MTR_5g062960 | 41.121 | 107 | 56 | 3 | 276 | 378 | 1 | 104 | 1.52e-16 | 78.2 |
| MS.gene005965.t1 | MTR_3g064050 | 45.000 | 80 | 42 | 2 | 288 | 366 | 29 | 107 | 3.33e-13 | 72.0 |
| MS.gene005965.t1 | MTR_5g032260 | 40.426 | 94 | 54 | 2 | 276 | 368 | 49 | 141 | 1.40e-12 | 69.3 |
| MS.gene005965.t1 | MTR_1g058350 | 35.780 | 109 | 67 | 2 | 113 | 218 | 71 | 179 | 2.80e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005965.t1 | AT4G30080 | 67.358 | 386 | 111 | 6 | 1 | 378 | 1 | 379 | 0.0 | 530 |
| MS.gene005965.t1 | AT2G28350 | 67.183 | 387 | 93 | 7 | 13 | 378 | 4 | 377 | 2.36e-175 | 506 |
| MS.gene005965.t1 | AT2G28350 | 67.183 | 387 | 93 | 7 | 13 | 378 | 4 | 377 | 4.12e-175 | 506 |
| MS.gene005965.t1 | AT1G77850 | 44.986 | 369 | 186 | 5 | 16 | 378 | 16 | 373 | 2.29e-106 | 327 |
| MS.gene005965.t1 | AT1G77850 | 44.986 | 369 | 186 | 5 | 16 | 378 | 16 | 373 | 2.70e-106 | 327 |
| MS.gene005965.t1 | AT5G37020 | 40.220 | 363 | 170 | 8 | 13 | 366 | 16 | 340 | 3.85e-79 | 261 |
| MS.gene005965.t1 | AT5G37020 | 40.220 | 363 | 170 | 8 | 13 | 366 | 16 | 340 | 7.71e-79 | 260 |
| MS.gene005965.t1 | AT1G19220 | 40.379 | 369 | 175 | 9 | 5 | 366 | 9 | 339 | 2.19e-77 | 260 |
| MS.gene005965.t1 | AT1G30330 | 40.217 | 368 | 172 | 9 | 9 | 366 | 14 | 343 | 3.79e-76 | 255 |
| MS.gene005965.t1 | AT1G30330 | 40.217 | 368 | 172 | 9 | 9 | 366 | 14 | 343 | 3.79e-76 | 255 |
| MS.gene005965.t1 | AT1G30330 | 39.669 | 363 | 172 | 8 | 13 | 366 | 17 | 341 | 6.82e-76 | 254 |
| MS.gene005965.t1 | AT2G33860 | 39.043 | 397 | 192 | 10 | 15 | 402 | 52 | 407 | 6.26e-75 | 246 |
| MS.gene005965.t1 | AT5G20730 | 39.394 | 363 | 171 | 10 | 13 | 366 | 18 | 340 | 2.78e-74 | 252 |
| MS.gene005965.t1 | AT1G19850 | 40.541 | 370 | 165 | 11 | 11 | 367 | 35 | 362 | 4.31e-74 | 249 |
| MS.gene005965.t1 | AT1G19850 | 40.541 | 370 | 165 | 11 | 11 | 367 | 46 | 373 | 5.25e-74 | 249 |
| MS.gene005965.t1 | AT5G20730 | 39.286 | 364 | 171 | 11 | 13 | 366 | 18 | 341 | 5.81e-73 | 249 |
| MS.gene005965.t1 | AT5G20730 | 39.286 | 364 | 171 | 11 | 13 | 366 | 18 | 341 | 7.40e-73 | 248 |
| MS.gene005965.t1 | AT5G60450 | 37.789 | 389 | 183 | 7 | 8 | 378 | 30 | 377 | 3.89e-72 | 241 |
| MS.gene005965.t1 | AT5G60450 | 38.259 | 379 | 175 | 7 | 18 | 378 | 64 | 401 | 6.89e-71 | 239 |
| MS.gene005965.t1 | AT5G62000 | 37.433 | 374 | 187 | 6 | 13 | 378 | 55 | 389 | 8.98e-69 | 234 |
| MS.gene005965.t1 | AT5G62000 | 37.433 | 374 | 187 | 6 | 13 | 378 | 55 | 389 | 9.55e-69 | 234 |
| MS.gene005965.t1 | AT5G62000 | 37.433 | 374 | 187 | 6 | 13 | 378 | 55 | 389 | 9.55e-69 | 234 |
| MS.gene005965.t1 | AT5G62000 | 37.433 | 374 | 187 | 6 | 13 | 378 | 55 | 389 | 9.55e-69 | 234 |
| MS.gene005965.t1 | AT5G62000 | 37.433 | 374 | 187 | 6 | 13 | 378 | 55 | 389 | 9.55e-69 | 234 |
| MS.gene005965.t1 | AT1G59750 | 37.903 | 372 | 183 | 7 | 15 | 378 | 18 | 349 | 3.72e-66 | 224 |
| MS.gene005965.t1 | AT1G59750 | 37.903 | 372 | 183 | 7 | 15 | 378 | 18 | 349 | 3.86e-66 | 224 |
| MS.gene005965.t1 | AT1G59750 | 37.903 | 372 | 183 | 7 | 15 | 378 | 18 | 349 | 3.86e-66 | 224 |
| MS.gene005965.t1 | AT1G59750 | 37.903 | 372 | 183 | 7 | 15 | 378 | 18 | 349 | 3.94e-66 | 224 |
| MS.gene005965.t1 | AT2G46530 | 38.933 | 375 | 171 | 13 | 16 | 378 | 18 | 346 | 8.39e-65 | 219 |
| MS.gene005965.t1 | AT2G46530 | 38.933 | 375 | 171 | 13 | 16 | 378 | 39 | 367 | 9.03e-65 | 219 |
| MS.gene005965.t1 | AT3G61830 | 35.392 | 421 | 214 | 11 | 7 | 414 | 13 | 388 | 6.93e-63 | 214 |
| MS.gene005965.t1 | AT4G23980 | 37.634 | 372 | 181 | 10 | 16 | 378 | 9 | 338 | 7.78e-63 | 214 |
| MS.gene005965.t1 | AT4G23980 | 36.049 | 405 | 200 | 11 | 16 | 403 | 9 | 371 | 8.39e-63 | 214 |
| MS.gene005965.t1 | AT1G35540 | 34.568 | 405 | 207 | 11 | 12 | 402 | 20 | 380 | 1.52e-55 | 194 |
| MS.gene005965.t1 | AT5G37020 | 39.576 | 283 | 131 | 6 | 86 | 366 | 1 | 245 | 5.50e-55 | 194 |
| MS.gene005965.t1 | AT1G35520 | 36.364 | 363 | 177 | 10 | 12 | 366 | 20 | 336 | 4.23e-54 | 190 |
| MS.gene005965.t1 | AT1G35240 | 35.714 | 364 | 178 | 11 | 12 | 366 | 20 | 336 | 9.17e-54 | 189 |
| MS.gene005965.t1 | AT2G33860 | 40.210 | 286 | 133 | 6 | 118 | 402 | 2 | 250 | 1.02e-53 | 186 |
| MS.gene005965.t1 | AT1G34310 | 36.517 | 356 | 172 | 9 | 19 | 366 | 27 | 336 | 2.88e-53 | 187 |
| MS.gene005965.t1 | AT1G34390 | 35.714 | 364 | 176 | 12 | 12 | 366 | 20 | 334 | 1.49e-52 | 186 |
| MS.gene005965.t1 | AT1G34170 | 33.938 | 386 | 191 | 13 | 19 | 386 | 25 | 364 | 4.83e-52 | 182 |
| MS.gene005965.t1 | AT1G34410 | 35.262 | 363 | 181 | 10 | 12 | 366 | 20 | 336 | 3.10e-51 | 182 |
| MS.gene005965.t1 | AT3G61830 | 36.011 | 361 | 180 | 10 | 60 | 414 | 22 | 337 | 3.95e-51 | 181 |
| MS.gene005965.t1 | AT2G46530 | 40.377 | 265 | 114 | 8 | 117 | 378 | 36 | 259 | 6.96e-47 | 169 |
| MS.gene005965.t1 | AT1G34170 | 32.383 | 386 | 171 | 13 | 19 | 386 | 25 | 338 | 2.21e-44 | 161 |
| MS.gene005965.t1 | AT1G34170 | 32.383 | 386 | 171 | 13 | 19 | 386 | 25 | 338 | 1.21e-43 | 160 |
| MS.gene005965.t1 | AT1G43950 | 40.654 | 214 | 108 | 7 | 12 | 217 | 20 | 222 | 3.46e-39 | 141 |
| MS.gene005965.t1 | AT2G36080 | 34.234 | 111 | 69 | 2 | 112 | 218 | 32 | 142 | 8.95e-12 | 63.9 |
| MS.gene005965.t1 | AT2G36080 | 34.234 | 111 | 69 | 2 | 112 | 218 | 32 | 142 | 8.95e-12 | 63.9 |
| MS.gene005965.t1 | AT3G25730 | 32.824 | 131 | 76 | 2 | 118 | 246 | 183 | 303 | 1.73e-11 | 65.5 |
| MS.gene005965.t1 | AT2G36080 | 34.234 | 111 | 69 | 2 | 112 | 218 | 32 | 142 | 1.78e-11 | 64.3 |
| MS.gene005965.t1 | AT2G36080 | 34.234 | 111 | 69 | 2 | 112 | 218 | 32 | 142 | 1.92e-11 | 64.3 |
| MS.gene005965.t1 | AT2G46870 | 34.906 | 106 | 62 | 2 | 110 | 215 | 27 | 125 | 5.29e-11 | 63.9 |
| MS.gene005965.t1 | AT1G01030 | 36.842 | 95 | 59 | 1 | 113 | 207 | 51 | 144 | 7.17e-11 | 63.9 |
| MS.gene005965.t1 | AT4G01500 | 33.654 | 104 | 66 | 1 | 118 | 221 | 36 | 136 | 7.48e-11 | 63.5 |
Find 84 sgRNAs with CRISPR-Local
Find 159 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTAGGATTAGTTGGTTTA+TGG | 0.157206 | 1.3:+66121745 | MS.gene005965:CDS |
| TTTGAAGAAGATTGTTTCTT+TGG | 0.183552 | 1.3:+66121044 | MS.gene005965:CDS |
| ACGTAGGCTTCATCAGTTTC+AGG | 0.222422 | 1.3:-66120981 | None:intergenic |
| GAGATCTTTGTGTTGGTATA+AGG | 0.249926 | 1.3:+66121381 | MS.gene005965:CDS |
| GAGAGGTGGAACACGGGTTT+TGG | 0.257788 | 1.3:-66120919 | None:intergenic |
| TTCTCCTTGGCGCCTTCTTC+AGG | 0.267828 | 1.3:+66121814 | MS.gene005965:CDS |
| TTGTTTGGTGGTGGTGGTTC+TGG | 0.287312 | 1.3:+66121482 | MS.gene005965:CDS |
| TTGAAACTGAGGATTCTTCT+AGG | 0.307810 | 1.3:+66121729 | MS.gene005965:CDS |
| TCTAGGATTAGTTGGTTTAT+GGG | 0.316818 | 1.3:+66121746 | MS.gene005965:CDS |
| GCTGTAAACTGTGCTGTTAA+TGG | 0.368748 | 1.3:+66121584 | MS.gene005965:CDS |
| TGGAGGCTCTCCTTGGTATA+AGG | 0.368842 | 1.3:+66123175 | MS.gene005965:CDS |
| TTTCTAATTCTTCTAGTACT+TGG | 0.397904 | 1.3:+66121444 | MS.gene005965:CDS |
| ATGCAAATTCAATGGTGTTC+TGG | 0.400255 | 1.3:+66121686 | MS.gene005965:CDS |
| GGAGAATCAGGCCAACGAAT+TGG | 0.402668 | 1.3:-66121797 | None:intergenic |
| CTTTGGAAACAATGGCTTAG+AGG | 0.405587 | 1.3:+66121061 | MS.gene005965:CDS |
| AGGATTCTTCTAGGATTAGT+TGG | 0.407748 | 1.3:+66121738 | MS.gene005965:CDS |
| TTCGTTGGCCTGATTCTCCT+TGG | 0.409284 | 1.3:+66121801 | MS.gene005965:CDS |
| AGAGCAAAGAAAGGTGGAAT+TGG | 0.414735 | 1.3:+66121404 | MS.gene005965:CDS |
| AGAAGGCGCCAAGGAGAATC+AGG | 0.419546 | 1.3:-66121809 | None:intergenic |
| CAACACAAGCCTGATCTTGT+TGG | 0.424795 | 1.3:+66123203 | MS.gene005965:CDS |
| CGTAGGCTTCATCAGTTTCA+GGG | 0.436090 | 1.3:-66120980 | None:intergenic |
| AAATGGTGGCAATGATTTGA+TGG | 0.436140 | 1.3:+66121532 | MS.gene005965:CDS |
| TTAGCAATAATTGTCTGAAC+AGG | 0.436415 | 1.3:-66121212 | None:intergenic |
| CCATCAGAAGAATTCTCAAC+TGG | 0.442393 | 1.3:-66123155 | None:intergenic |
| AATGTCTTTGCAAAAGAAGC+TGG | 0.444449 | 1.3:-66121095 | None:intergenic |
| GAAACCTTAACACAAAATTC+AGG | 0.450898 | 1.3:-66121647 | None:intergenic |
| ATAGTCTCAGCACAGTATCT+AGG | 0.458408 | 1.3:-66121158 | None:intergenic |
| CTTCTGATGGAGGCTCTCCT+TGG | 0.459576 | 1.3:+66123168 | MS.gene005965:CDS |
| TCACCTTTGTTTGGTGGTGG+TGG | 0.463200 | 1.3:+66121476 | MS.gene005965:CDS |
| AGTGCTTAGATTCACAACTA+TGG | 0.464164 | 1.3:+66120793 | MS.gene005965:CDS |
| AACCGTGTATCACCTTTGTT+TGG | 0.470136 | 1.3:+66121467 | MS.gene005965:CDS |
| AAATGTTACTGCATTGTGTA+TGG | 0.470847 | 1.3:+66123232 | MS.gene005965:CDS |
| GTTTGTAGTTATGGATTCCA+TGG | 0.477031 | 1.3:+66120755 | MS.gene005965:CDS |
| AAGTTTAGACATATCTATAG+AGG | 0.484340 | 1.3:+66121257 | MS.gene005965:CDS |
| AATCACAAGAAGCTTGTTGC+TGG | 0.491007 | 1.3:+66121326 | MS.gene005965:CDS |
| AATCTGCAATGCAAATTCAA+TGG | 0.492272 | 1.3:+66121678 | MS.gene005965:CDS |
| GAAGAATCCTCAGTTTCAAA+AGG | 0.493790 | 1.3:-66121725 | None:intergenic |
| AATTCAGGAGTACTAGCTCT+TGG | 0.500520 | 1.3:-66121632 | None:intergenic |
| GATTGTTTCTTTGGAAACAA+TGG | 0.500964 | 1.3:+66121053 | MS.gene005965:CDS |
| CGTGTATCACCTTTGTTTGG+TGG | 0.513472 | 1.3:+66121470 | MS.gene005965:CDS |
| ATAATATTGTTACCTGAAGA+AGG | 0.514309 | 1.3:-66121826 | None:intergenic |
| CAATGATTTGATGGGAAAAG+TGG | 0.515215 | 1.3:+66121541 | MS.gene005965:CDS |
| CAACTATGGCACGCATGTGC+TGG | 0.516615 | 1.3:+66120807 | MS.gene005965:CDS |
| TTTGGAAACAATGGCTTAGA+GGG | 0.516902 | 1.3:+66121062 | MS.gene005965:CDS |
| AAGAGTGGTTCTGTTTCTGA+AGG | 0.520431 | 1.3:+66123095 | MS.gene005965:CDS |
| AGTTCAAATATTTCAAAGAG+TGG | 0.525439 | 1.3:+66123080 | MS.gene005965:intron |
| GGTGGTTCTGGTTTCTTGTG+TGG | 0.526295 | 1.3:+66121494 | MS.gene005965:CDS |
| AGGATATGCATGGACAGTGT+TGG | 0.527527 | 1.3:+66121234 | MS.gene005965:CDS |
| GCAAAGAAAGGTGGAATTGG+TGG | 0.533246 | 1.3:+66121407 | MS.gene005965:CDS |
| CCAGTTGAGAATTCTTCTGA+TGG | 0.534523 | 1.3:+66123155 | MS.gene005965:CDS |
| GTATCACCTTTGTTTGGTGG+TGG | 0.534706 | 1.3:+66121473 | MS.gene005965:CDS |
| GAAAATGGAGATCTTTGTGT+TGG | 0.538803 | 1.3:+66121374 | MS.gene005965:CDS |
| TGTTCAGACAATTATTGCTA+AGG | 0.546499 | 1.3:+66121214 | MS.gene005965:CDS |
| TTCATAGCAGAGATTCTACA+AGG | 0.548674 | 1.3:-66120945 | None:intergenic |
| TGTTGTTGATCCTTATACCA+AGG | 0.550241 | 1.3:-66123185 | None:intergenic |
| GTTGTCAAAAGATGTCTCCT+TGG | 0.557297 | 1.3:-66121284 | None:intergenic |
| AAGAAAGGTGGAATTGGTGG+TGG | 0.559157 | 1.3:+66121410 | MS.gene005965:CDS |
| GCAATAATTGTCTGAACAGG+TGG | 0.564242 | 1.3:-66121209 | None:intergenic |
| GCACGCATGTGCTGGTGCCA+TGG | 0.574468 | 1.3:+66120815 | MS.gene005965:CDS |
| ATAAGGAGAGCAAAGAAAGG+TGG | 0.575173 | 1.3:+66121398 | MS.gene005965:CDS |
| AATGGTGGCAATGATTTGAT+GGG | 0.576109 | 1.3:+66121533 | MS.gene005965:CDS |
| GGTATAAGGAGAGCAAAGAA+AGG | 0.576664 | 1.3:+66121395 | MS.gene005965:CDS |
| ATTATTGCTAAGGATATGCA+TGG | 0.587806 | 1.3:+66121224 | MS.gene005965:CDS |
| ATGTTCAAGATCCAATTCGT+TGG | 0.592882 | 1.3:+66121786 | MS.gene005965:CDS |
| GTTGAGAATTCTTCTGATGG+AGG | 0.594043 | 1.3:+66123158 | MS.gene005965:CDS |
| GAGATTCTACAAGGGATGAG+AGG | 0.595750 | 1.3:-66120936 | None:intergenic |
| TCTGCTGAATAATCCAACCT+AGG | 0.603231 | 1.3:-66121185 | None:intergenic |
| GCATGTTCTGCATGACCTTG+TGG | 0.603875 | 1.3:-66120876 | None:intergenic |
| ATGTGAAATGTGTAAACCCT+TGG | 0.607377 | 1.3:+66122505 | MS.gene005965:CDS |
| AATCTCTGCTATGAAATACA+TGG | 0.608031 | 1.3:+66120953 | MS.gene005965:CDS |
| AAGGGATGAGAGGTGGAACA+CGG | 0.623921 | 1.3:-66120926 | None:intergenic |
| GAACCACCACCACCAAACAA+AGG | 0.625620 | 1.3:-66121479 | None:intergenic |
| CACCAAACAAAGGTGATACA+CGG | 0.628457 | 1.3:-66121469 | None:intergenic |
| ACACAATCTGATGCAAACAA+TGG | 0.631167 | 1.3:+66121119 | MS.gene005965:CDS |
| ATTCTACAAGGGATGAGAGG+TGG | 0.633006 | 1.3:-66120933 | None:intergenic |
| AATGATTTGATGGGAAAAGT+GGG | 0.649981 | 1.3:+66121542 | MS.gene005965:CDS |
| GTTACCTGAAGAAGGCGCCA+AGG | 0.651106 | 1.3:-66121818 | None:intergenic |
| GAGTGGTGGCATTTGAACCA+TGG | 0.651177 | 1.3:-66120832 | None:intergenic |
| AGGGATGAGAGGTGGAACAC+GGG | 0.668889 | 1.3:-66120925 | None:intergenic |
| AAAGTCTTCTACTTTCCACA+AGG | 0.669890 | 1.3:+66120861 | MS.gene005965:CDS |
| TCATAGCAGAGATTCTACAA+GGG | 0.672161 | 1.3:-66120944 | None:intergenic |
| TCTGATGCAAACAATGGTGG+TGG | 0.672693 | 1.3:+66121125 | MS.gene005965:CDS |
| CAATCTGATGCAAACAATGG+TGG | 0.683286 | 1.3:+66121122 | MS.gene005965:CDS |
| ATATCTATAGAGGAACACCA+AGG | 0.796890 | 1.3:+66121267 | MS.gene005965:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTCCAAATAACAAAATA+TGG | - | chr1.3:66123040-66123059 | None:intergenic | 15.0% |
| !! | CAAATAACAAAATATGGTTA+TGG | - | chr1.3:66123034-66123053 | None:intergenic | 20.0% |
| !! | TAATTTAATTCTTGCTTAAC+AGG | - | chr1.3:66122175-66122194 | None:intergenic | 20.0% |
| !!! | AAATCAGATGGATTATTATT+TGG | - | chr1.3:66122786-66122805 | None:intergenic | 20.0% |
| !!! | CATAACCATATTTTGTTATT+TGG | + | chr1.3:66123032-66123051 | MS.gene005965:intron | 20.0% |
| ! | AAAATATGGTTATGGTTATG+GGG | - | chr1.3:66123026-66123045 | None:intergenic | 25.0% |
| ! | AACTTAATAACTTTCTCTCA+AGG | - | chr1.3:66122363-66122382 | None:intergenic | 25.0% |
| ! | AAGTTTAGACATATCTATAG+AGG | + | chr1.3:66121257-66121276 | MS.gene005965:CDS | 25.0% |
| ! | ACAAAATATGGTTATGGTTA+TGG | - | chr1.3:66123028-66123047 | None:intergenic | 25.0% |
| ! | AGTTCAAATATTTCAAAGAG+TGG | + | chr1.3:66123080-66123099 | MS.gene005965:intron | 25.0% |
| ! | ATAATATTGTTACCTGAAGA+AGG | - | chr1.3:66121829-66121848 | None:intergenic | 25.0% |
| ! | CAAAATATGGTTATGGTTAT+GGG | - | chr1.3:66123027-66123046 | None:intergenic | 25.0% |
| ! | GTAATTGAGAAGATTAATGT+TGG | - | chr1.3:66122673-66122692 | None:intergenic | 25.0% |
| ! | TAAGTTTGTACCTACTTAAT+TGG | + | chr1.3:66122377-66122396 | MS.gene005965:intron | 25.0% |
| ! | TGATTTATGAGGTGAAAATA+TGG | - | chr1.3:66122615-66122634 | None:intergenic | 25.0% |
| ! | TTTCTAATTCTTCTAGTACT+TGG | + | chr1.3:66121444-66121463 | MS.gene005965:CDS | 25.0% |
| !! | AAATTCTGGTCAAAGTTTTA+AGG | + | chr1.3:66122977-66122996 | MS.gene005965:intron | 25.0% |
| !! | ATTGTTATTGATACTCTTGT+AGG | - | chr1.3:66122910-66122929 | None:intergenic | 25.0% |
| !! | TTGTTATTGATACTCTTGTA+GGG | - | chr1.3:66122909-66122928 | None:intergenic | 25.0% |
| !! | TTTGAAGAAGATTGTTTCTT+TGG | + | chr1.3:66121044-66121063 | MS.gene005965:CDS | 25.0% |
| !!! | TTCACATTTTGAAGTAAATC+TGG | - | chr1.3:66122492-66122511 | None:intergenic | 25.0% |
| AAATGTTACTGCATTGTGTA+TGG | + | chr1.3:66123232-66123251 | MS.gene005965:CDS | 30.0% | |
| AATCTCTGCTATGAAATACA+TGG | + | chr1.3:66120953-66120972 | MS.gene005965:CDS | 30.0% | |
| AATCTGCAATGCAAATTCAA+TGG | + | chr1.3:66121678-66121697 | MS.gene005965:CDS | 30.0% | |
| AATGAGAACAGAAAAAATGG+TGG | + | chr1.3:66121518-66121537 | MS.gene005965:CDS | 30.0% | |
| AATGATTTGATGGGAAAAGT+GGG | + | chr1.3:66121542-66121561 | MS.gene005965:CDS | 30.0% | |
| AATTCAGTGCATCAATAAGA+TGG | + | chr1.3:66122008-66122027 | MS.gene005965:intron | 30.0% | |
| AGACTAATTCAACTAACCAA+GGG | - | chr1.3:66122524-66122543 | None:intergenic | 30.0% | |
| AGATTAATGTTGGAGATTGA+TGG | - | chr1.3:66122663-66122682 | None:intergenic | 30.0% | |
| ATAAACCTTGGTTTCTTTCT+TGG | - | chr1.3:66122585-66122604 | None:intergenic | 30.0% | |
| ATTATTGCTAAGGATATGCA+TGG | + | chr1.3:66121224-66121243 | MS.gene005965:CDS | 30.0% | |
| GAAACCTTAACACAAAATTC+AGG | - | chr1.3:66121650-66121669 | None:intergenic | 30.0% | |
| GGAAATGAGAACAGAAAAAA+TGG | + | chr1.3:66121515-66121534 | MS.gene005965:CDS | 30.0% | |
| TATGGATCTTGAATAAACCT+TGG | - | chr1.3:66122597-66122616 | None:intergenic | 30.0% | |
| TGTTCAGACAATTATTGCTA+AGG | + | chr1.3:66121214-66121233 | MS.gene005965:CDS | 30.0% | |
| TTACTTCAAGCCAATTAAGT+AGG | - | chr1.3:66122390-66122409 | None:intergenic | 30.0% | |
| TTAGCAATAATTGTCTGAAC+AGG | - | chr1.3:66121215-66121234 | None:intergenic | 30.0% | |
| TTGAAGGGAATTAAATCAGA+TGG | - | chr1.3:66122798-66122817 | None:intergenic | 30.0% | |
| ! | CTAACTCGTTTTCTCTTAAA+GGG | - | chr1.3:66121022-66121041 | None:intergenic | 30.0% |
| ! | GATTGTTTCTTTGGAAACAA+TGG | + | chr1.3:66121053-66121072 | MS.gene005965:CDS | 30.0% |
| ! | TAACTCGTTTTCTCTTAAAG+GGG | - | chr1.3:66121021-66121040 | None:intergenic | 30.0% |
| ! | TACTCCTGAATTTTGTGTTA+AGG | + | chr1.3:66121643-66121662 | MS.gene005965:CDS | 30.0% |
| ! | TCTAACTCGTTTTCTCTTAA+AGG | - | chr1.3:66121023-66121042 | None:intergenic | 30.0% |
| ! | TGTTAATGGAAGATCTTTTG+AGG | + | chr1.3:66121598-66121617 | MS.gene005965:CDS | 30.0% |
| ! | TTTATGATGTCATGTTTTCC+AGG | + | chr1.3:66122452-66122471 | MS.gene005965:intron | 30.0% |
| !! | TCTAGGATTAGTTGGTTTAT+GGG | + | chr1.3:66121746-66121765 | MS.gene005965:CDS | 30.0% |
| !! | TTCTAGGATTAGTTGGTTTA+TGG | + | chr1.3:66121745-66121764 | MS.gene005965:CDS | 30.0% |
| AAAGTCTTCTACTTTCCACA+AGG | + | chr1.3:66120861-66120880 | MS.gene005965:CDS | 35.0% | |
| AAATGGTGGCAATGATTTGA+TGG | + | chr1.3:66121532-66121551 | MS.gene005965:CDS | 35.0% | |
| AATGGTGAGAGATTGAAGTT+TGG | - | chr1.3:66122555-66122574 | None:intergenic | 35.0% | |
| AATGGTGGCAATGATTTGAT+GGG | + | chr1.3:66121533-66121552 | MS.gene005965:CDS | 35.0% | |
| AATGTCTTTGCAAAAGAAGC+TGG | - | chr1.3:66121098-66121117 | None:intergenic | 35.0% | |
| ACACAATCTGATGCAAACAA+TGG | + | chr1.3:66121119-66121138 | MS.gene005965:CDS | 35.0% | |
| AGTGCTTAGATTCACAACTA+TGG | + | chr1.3:66120793-66120812 | MS.gene005965:CDS | 35.0% | |
| ATATCTATAGAGGAACACCA+AGG | + | chr1.3:66121267-66121286 | MS.gene005965:CDS | 35.0% | |
| ATCATCAACAACCGATAACT+AGG | + | chr1.3:66122871-66122890 | MS.gene005965:intron | 35.0% | |
| ATGCAAATTCAATGGTGTTC+TGG | + | chr1.3:66121686-66121705 | MS.gene005965:CDS | 35.0% | |
| ATGTGAAATGTGTAAACCCT+TGG | + | chr1.3:66122505-66122524 | MS.gene005965:CDS | 35.0% | |
| ATGTTCAAGATCCAATTCGT+TGG | + | chr1.3:66121786-66121805 | MS.gene005965:CDS | 35.0% | |
| ATTCTAGCAAGTAGCAACTA+TGG | - | chr1.3:66122331-66122350 | None:intergenic | 35.0% | |
| CAATGATTTGATGGGAAAAG+TGG | + | chr1.3:66121541-66121560 | MS.gene005965:CDS | 35.0% | |
| CTACAACAAGACATGTTTCT+TGG | + | chr1.3:66122825-66122844 | MS.gene005965:intron | 35.0% | |
| CTATGGTAGATAGTACTAGT+AGG | - | chr1.3:66122314-66122333 | None:intergenic | 35.0% | |
| GAAAATGGAGATCTTTGTGT+TGG | + | chr1.3:66121374-66121393 | MS.gene005965:CDS | 35.0% | |
| GAAGAATCCTCAGTTTCAAA+AGG | - | chr1.3:66121728-66121747 | None:intergenic | 35.0% | |
| GAGACTAATTCAACTAACCA+AGG | - | chr1.3:66122525-66122544 | None:intergenic | 35.0% | |
| GTTTGTAGTTATGGATTCCA+TGG | + | chr1.3:66120755-66120774 | MS.gene005965:CDS | 35.0% | |
| TCATAGCAGAGATTCTACAA+GGG | - | chr1.3:66120947-66120966 | None:intergenic | 35.0% | |
| TGTTGTTGATCCTTATACCA+AGG | - | chr1.3:66123188-66123207 | None:intergenic | 35.0% | |
| TTCATAGCAGAGATTCTACA+AGG | - | chr1.3:66120948-66120967 | None:intergenic | 35.0% | |
| TTGAAACTGAGGATTCTTCT+AGG | + | chr1.3:66121729-66121748 | MS.gene005965:CDS | 35.0% | |
| TTTGGAAACAATGGCTTAGA+GGG | + | chr1.3:66121062-66121081 | MS.gene005965:CDS | 35.0% | |
| ! | AGTTGCTACTTGCTAGAATT+TGG | + | chr1.3:66122332-66122351 | MS.gene005965:intron | 35.0% |
| ! | GAGATCTTTGTGTTGGTATA+AGG | + | chr1.3:66121381-66121400 | MS.gene005965:CDS | 35.0% |
| ! | GCATTGGAAGTTGATTTATG+AGG | - | chr1.3:66122626-66122645 | None:intergenic | 35.0% |
| ! | TAGAAGACTTTTGTGTTGAG+TGG | - | chr1.3:66120852-66120871 | None:intergenic | 35.0% |
| ! | TCTTTTGCATCAAGCATACA+GGG | + | chr1.3:66122738-66122757 | MS.gene005965:intron | 35.0% |
| ! | TGAATCTAAGCACTTTTCAG+AGG | - | chr1.3:66120787-66120806 | None:intergenic | 35.0% |
| ! | TTCTTTTGCATCAAGCATAC+AGG | + | chr1.3:66122737-66122756 | MS.gene005965:intron | 35.0% |
| ! | TTGGTAACTTGTCATTGTCA+AGG | + | chr1.3:66122844-66122863 | MS.gene005965:intron | 35.0% |
| ! | TTTTCTGTTCCAACAAGATC+AGG | - | chr1.3:66123215-66123234 | None:intergenic | 35.0% |
| !! | AGGATTCTTCTAGGATTAGT+TGG | + | chr1.3:66121738-66121757 | MS.gene005965:CDS | 35.0% |
| !! | ATTGATGGTGATGATGATGA+TGG | - | chr1.3:66122648-66122667 | None:intergenic | 35.0% |
| !! | CTTTTCAGAGGTTTTTTCCA+TGG | - | chr1.3:66120775-66120794 | None:intergenic | 35.0% |
| !! | GTGTTTTTGAGAGCAGAAAA+TGG | + | chr1.3:66121359-66121378 | MS.gene005965:CDS | 35.0% |
| !! | TGAGACTATTTTTCCTAGGT+TGG | + | chr1.3:66121172-66121191 | MS.gene005965:CDS | 35.0% |
| !! | TGTTGTAGTAGCTTGTTGAA+GGG | - | chr1.3:66122813-66122832 | None:intergenic | 35.0% |
| !! | TTGTTGTAGTAGCTTGTTGA+AGG | - | chr1.3:66122814-66122833 | None:intergenic | 35.0% |
| !!! | CAAAATGCCTTTTGAAACTG+AGG | + | chr1.3:66121718-66121737 | MS.gene005965:CDS | 35.0% |
| !!! | GGTTAGTTTCATTTTGACGT+AGG | - | chr1.3:66121000-66121019 | None:intergenic | 35.0% |
| AACCGTGTATCACCTTTGTT+TGG | + | chr1.3:66121467-66121486 | MS.gene005965:CDS | 40.0% | |
| AACCTTGGTTTCTTTCTTGG+AGG | - | chr1.3:66122582-66122601 | None:intergenic | 40.0% | |
| AGAGCAAAGAAAGGTGGAAT+TGG | + | chr1.3:66121404-66121423 | MS.gene005965:CDS | 40.0% | |
| ATAAGGAGAGCAAAGAAAGG+TGG | + | chr1.3:66121398-66121417 | MS.gene005965:CDS | 40.0% | |
| ATACTCTTGTAGGGTCCATA+AGG | - | chr1.3:66122900-66122919 | None:intergenic | 40.0% | |
| ATAGTCTCAGCACAGTATCT+AGG | - | chr1.3:66121161-66121180 | None:intergenic | 40.0% | |
| CAATCTGATGCAAACAATGG+TGG | + | chr1.3:66121122-66121141 | MS.gene005965:CDS | 40.0% | |
| CACCAAACAAAGGTGATACA+CGG | - | chr1.3:66121472-66121491 | None:intergenic | 40.0% | |
| CCAGTTGAGAATTCTTCTGA+TGG | + | chr1.3:66123155-66123174 | MS.gene005965:CDS | 40.0% | |
| CCATCAGAAGAATTCTCAAC+TGG | - | chr1.3:66123158-66123177 | None:intergenic | 40.0% | |
| GCAATAATTGTCTGAACAGG+TGG | - | chr1.3:66121212-66121231 | None:intergenic | 40.0% | |
| GGTATAAGGAGAGCAAAGAA+AGG | + | chr1.3:66121395-66121414 | MS.gene005965:CDS | 40.0% | |
| GTTGAGAATTCTTCTGATGG+AGG | + | chr1.3:66123158-66123177 | MS.gene005965:CDS | 40.0% | |
| GTTGTCAAAAGATGTCTCCT+TGG | - | chr1.3:66121287-66121306 | None:intergenic | 40.0% | |
| TCTGCTGAATAATCCAACCT+AGG | - | chr1.3:66121188-66121207 | None:intergenic | 40.0% | |
| TTGTTGAGTGTGGGAAATTC+TGG | + | chr1.3:66122963-66122982 | MS.gene005965:intron | 40.0% | |
| ! | AAGACTTTTGTGTTGAGTGG+TGG | - | chr1.3:66120849-66120868 | None:intergenic | 40.0% |
| ! | AGGAGACATCTTTTGACAAC+TGG | + | chr1.3:66121287-66121306 | MS.gene005965:CDS | 40.0% |
| ! | CTTTGGAAACAATGGCTTAG+AGG | + | chr1.3:66121061-66121080 | MS.gene005965:CDS | 40.0% |
| ! | GACATCTTTTGACAACTGGT+TGG | + | chr1.3:66121291-66121310 | MS.gene005965:CDS | 40.0% |
| ! | GCTGTAAACTGTGCTGTTAA+TGG | + | chr1.3:66121584-66121603 | MS.gene005965:CDS | 40.0% |
| ! | GGGTGCTTTTGCTTCAATAT+TGG | - | chr1.3:66123006-66123025 | None:intergenic | 40.0% |
| ! | TCATGTTTTCCAGGTAGTGT+GGG | + | chr1.3:66122461-66122480 | MS.gene005965:intron | 40.0% |
| ! | TTCTTTCTTGGAGGTGTGAA+TGG | - | chr1.3:66122573-66122592 | None:intergenic | 40.0% |
| ! | TTGTCTTGCTTGTTGAGTGT+GGG | + | chr1.3:66122954-66122973 | MS.gene005965:intron | 40.0% |
| !! | AAGAGTGGTTCTGTTTCTGA+AGG | + | chr1.3:66123095-66123114 | MS.gene005965:CDS | 40.0% |
| !! | AATCACAAGAAGCTTGTTGC+TGG | + | chr1.3:66121326-66121345 | MS.gene005965:CDS | 40.0% |
| !! | AATTCAGGAGTACTAGCTCT+TGG | - | chr1.3:66121635-66121654 | None:intergenic | 40.0% |
| !! | GTGCTGAGACTATTTTTCCT+AGG | + | chr1.3:66121168-66121187 | MS.gene005965:CDS | 40.0% |
| AAGAAAGGTGGAATTGGTGG+TGG | + | chr1.3:66121410-66121429 | MS.gene005965:CDS | 45.0% | |
| ACGTAGGCTTCATCAGTTTC+AGG | - | chr1.3:66120984-66121003 | None:intergenic | 45.0% | |
| AGGATATGCATGGACAGTGT+TGG | + | chr1.3:66121234-66121253 | MS.gene005965:CDS | 45.0% | |
| ATTCTACAAGGGATGAGAGG+TGG | - | chr1.3:66120936-66120955 | None:intergenic | 45.0% | |
| CAACACAAGCCTGATCTTGT+TGG | + | chr1.3:66123203-66123222 | MS.gene005965:CDS | 45.0% | |
| CACCTCCAAGAAAGAAACCA+AGG | + | chr1.3:66122577-66122596 | MS.gene005965:intron | 45.0% | |
| CCATAAGGAGGCCTAGTTAT+CGG | - | chr1.3:66122885-66122904 | None:intergenic | 45.0% | |
| CGTAGGCTTCATCAGTTTCA+GGG | - | chr1.3:66120983-66121002 | None:intergenic | 45.0% | |
| GAGATTCTACAAGGGATGAG+AGG | - | chr1.3:66120939-66120958 | None:intergenic | 45.0% | |
| GCAAAGAAAGGTGGAATTGG+TGG | + | chr1.3:66121407-66121426 | MS.gene005965:CDS | 45.0% | |
| TCTGATGCAAACAATGGTGG+TGG | + | chr1.3:66121125-66121144 | MS.gene005965:CDS | 45.0% | |
| ! | CGTGTATCACCTTTGTTTGG+TGG | + | chr1.3:66121470-66121489 | MS.gene005965:CDS | 45.0% |
| ! | CTTGTCTTGCTTGTTGAGTG+TGG | + | chr1.3:66122953-66122972 | MS.gene005965:intron | 45.0% |
| ! | GTATCACCTTTGTTTGGTGG+TGG | + | chr1.3:66121473-66121492 | MS.gene005965:CDS | 45.0% |
| ! | GTCATGTTTTCCAGGTAGTG+TGG | + | chr1.3:66122460-66122479 | MS.gene005965:intron | 45.0% |
| !! | GGTGATGATGATGATGGCAT+TGG | - | chr1.3:66122642-66122661 | None:intergenic | 45.0% |
| AAGGGATGAGAGGTGGAACA+CGG | - | chr1.3:66120929-66120948 | None:intergenic | 50.0% | |
| CCGATAACTAGGCCTCCTTA+TGG | + | chr1.3:66122882-66122901 | MS.gene005965:intron | 50.0% | |
| CTCTTGTAGGGTCCATAAGG+AGG | - | chr1.3:66122897-66122916 | None:intergenic | 50.0% | |
| GAACCACCACCACCAAACAA+AGG | - | chr1.3:66121482-66121501 | None:intergenic | 50.0% | |
| GAGTGGTGGCATTTGAACCA+TGG | - | chr1.3:66120835-66120854 | None:intergenic | 50.0% | |
| GCATGTTCTGCATGACCTTG+TGG | - | chr1.3:66120879-66120898 | None:intergenic | 50.0% | |
| GGAGAATCAGGCCAACGAAT+TGG | - | chr1.3:66121800-66121819 | None:intergenic | 50.0% | |
| TGGAGGCTCTCCTTGGTATA+AGG | + | chr1.3:66123175-66123194 | MS.gene005965:CDS | 50.0% | |
| TGGTCCAAATTGAGCATGCC+TGG | - | chr1.3:66122766-66122785 | None:intergenic | 50.0% | |
| ! | TTCGTTGGCCTGATTCTCCT+TGG | + | chr1.3:66121801-66121820 | MS.gene005965:CDS | 50.0% |
| !! | GGTGGTTCTGGTTTCTTGTG+TGG | + | chr1.3:66121494-66121513 | MS.gene005965:CDS | 50.0% |
| !! | TCACCTTTGTTTGGTGGTGG+TGG | + | chr1.3:66121476-66121495 | MS.gene005965:CDS | 50.0% |
| !! | TTGTTTGGTGGTGGTGGTTC+TGG | + | chr1.3:66121482-66121501 | MS.gene005965:CDS | 50.0% |
| AGGGATGAGAGGTGGAACAC+GGG | - | chr1.3:66120928-66120947 | None:intergenic | 55.0% | |
| CAACTATGGCACGCATGTGC+TGG | + | chr1.3:66120807-66120826 | MS.gene005965:CDS | 55.0% | |
| CATCAAGCATACAGGGAGCC+AGG | + | chr1.3:66122745-66122764 | MS.gene005965:intron | 55.0% | |
| CTGGTTCATCCCACACTACC+TGG | - | chr1.3:66122473-66122492 | None:intergenic | 55.0% | |
| CTTCTGATGGAGGCTCTCCT+TGG | + | chr1.3:66123168-66123187 | MS.gene005965:CDS | 55.0% | |
| GGAGCCAGGCATGCTCAATT+TGG | + | chr1.3:66122759-66122778 | MS.gene005965:intron | 55.0% | |
| TTCTCCTTGGCGCCTTCTTC+AGG | + | chr1.3:66121814-66121833 | MS.gene005965:CDS | 55.0% | |
| ! | GAGAGGTGGAACACGGGTTT+TGG | - | chr1.3:66120922-66120941 | None:intergenic | 55.0% |
| !! | AGAAGGCGCCAAGGAGAATC+AGG | - | chr1.3:66121812-66121831 | None:intergenic | 55.0% |
| !! | GTTACCTGAAGAAGGCGCCA+AGG | - | chr1.3:66121821-66121840 | None:intergenic | 55.0% |
| ! | GCACGCATGTGCTGGTGCCA+TGG | + | chr1.3:66120815-66120834 | MS.gene005965:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 66120753 | 66123262 | 66120753 | ID=MS.gene005965 |
| chr1.3 | mRNA | 66120753 | 66123262 | 66120753 | ID=MS.gene005965.t1;Parent=MS.gene005965 |
| chr1.3 | exon | 66120753 | 66121835 | 66120753 | ID=MS.gene005965.t1.exon1;Parent=MS.gene005965.t1 |
| chr1.3 | CDS | 66120753 | 66121835 | 66120753 | ID=cds.MS.gene005965.t1;Parent=MS.gene005965.t1 |
| chr1.3 | exon | 66122474 | 66122526 | 66122474 | ID=MS.gene005965.t1.exon2;Parent=MS.gene005965.t1 |
| chr1.3 | CDS | 66122474 | 66122526 | 66122474 | ID=cds.MS.gene005965.t1;Parent=MS.gene005965.t1 |
| chr1.3 | exon | 66123082 | 66123262 | 66123082 | ID=MS.gene005965.t1.exon3;Parent=MS.gene005965.t1 |
| chr1.3 | CDS | 66123082 | 66123262 | 66123082 | ID=cds.MS.gene005965.t1;Parent=MS.gene005965.t1 |
| Gene Sequence |
| Protein sequence |