AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene005989

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene005989.t1 MTR_1g095570 94.896 1685 53 6 1 1682 1 1655 0.0 3279
MS.gene005989.t1 MTR_1g095570 93.935 1253 43 6 433 1682 1 1223 0.0 2399
MS.gene005989.t1 MTR_6g033340 49.346 764 334 17 1 736 1 739 0.0 635
MS.gene005989.t1 MTR_6g033350 44.080 853 328 25 721 1528 1 749 2.76e-165 521
MS.gene005989.t1 MTR_6g033345 47.737 243 120 6 894 1131 1 241 7.44e-45 163
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene005989.t1 AT3G52250 37.227 1053 579 26 129 1150 228 1229 6.93e-164 542
MS.gene005989.t1 AT3G52250 45.614 171 83 7 1 164 1 168 1.95e-31 135
MS.gene005989.t1 AT3G52250 39.456 147 63 7 1390 1531 1479 1604 1.83e-13 76.6
MS.gene005989.t1 AT3G52250 37.227 1053 579 26 129 1150 228 1229 6.93e-164 542
MS.gene005989.t1 AT3G52250 45.614 171 83 7 1 164 1 168 1.95e-31 135
MS.gene005989.t1 AT3G52250 39.456 147 63 7 1390 1531 1479 1604 1.83e-13 76.6

Find 426 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGTTTCACATCACCATTTC+TGG 0.099421 1.3:-66506304 None:intergenic
CATCAGTCTGTTTGACCTTT+TGG 0.147569 1.3:-66506236 None:intergenic
GACCATCAGCTTCCTCTTTC+CGG 0.172635 1.3:+66506096 MS.gene005989:CDS
AAAACGGTTTGAAAGATTTA+AGG 0.182155 1.3:+66503137 MS.gene005989:CDS
ACGGTTTCCGAGGGTTCTTC+TGG 0.182952 1.3:+66505679 MS.gene005989:CDS
TCCTACATCATCTTCCAATT+TGG 0.196155 1.3:+66506626 MS.gene005989:CDS
GAAAGAAGCCTAGGCTTAAT+TGG 0.205176 1.3:+66500814 MS.gene005989:CDS
CTGCATTTGGAAAAGATTTC+CGG 0.212447 1.3:+66504474 MS.gene005989:CDS
TCTGAAAATCCTGTAACTTT+TGG 0.231138 1.3:-66500972 None:intergenic
TTGAAGAAATTTGCTGCATT+TGG 0.231426 1.3:+66504461 MS.gene005989:CDS
CTTCAGGCTGTATCATCTTT+TGG 0.233706 1.3:+66505100 MS.gene005989:CDS
GTCCTCTACTTGTGATATTC+AGG 0.238661 1.3:+66506032 MS.gene005989:CDS
TCCACAAGTTCAGCCATTTA+TGG 0.251864 1.3:+66506782 MS.gene005989:CDS
CAAATGCCGTTCACTATTCT+TGG 0.252464 1.3:-66506676 None:intergenic
TCAAGGGTTGTTTGAATATA+GGG 0.252482 1.3:-66504982 None:intergenic
AGGCGTGGATGATAAATTAT+TGG 0.260719 1.3:+66502177 MS.gene005989:intron
TTGACTGGAAGCCGCTTAAA+TGG 0.260978 1.3:+66500598 MS.gene005989:CDS
CTGGGGCATCTTCACTGTAT+TGG 0.262238 1.3:-66502647 None:intergenic
CTTCGCTTCGCAGTCAAAAT+AGG 0.263813 1.3:-66506366 None:intergenic
CAGTGATGAGTTATGGTTAT+TGG 0.265739 1.3:+66506508 MS.gene005989:CDS
TGGGGCATCTTCACTGTATT+GGG 0.273880 1.3:-66502646 None:intergenic
TGTTGACTCCTTGAATAGTT+TGG 0.276071 1.3:+66502306 MS.gene005989:CDS
CTATTAATAAGTTGCTGATA+TGG 0.280369 1.3:+66502401 MS.gene005989:CDS
GAAGATGCCTGCATTAATAT+TGG 0.290191 1.3:+66504316 MS.gene005989:CDS
CAAATTGGGCTTTCCTTCAT+AGG 0.299329 1.3:-66500700 None:intergenic
AATGCTTTGTCCGCTGTAAT+AGG 0.300408 1.3:+66502848 MS.gene005989:CDS
GTTGACTCCTTGAATAGTTT+GGG 0.303473 1.3:+66502307 MS.gene005989:CDS
GAAAATAAGCATGTCTCCTT+TGG 0.304458 1.3:+66505898 MS.gene005989:CDS
GTCAAGGGTTGTTTGAATAT+AGG 0.304984 1.3:-66504983 None:intergenic
CTTGATTATCAGATGTTTAG+AGG 0.307171 1.3:+66506750 MS.gene005989:CDS
GAAAATATGGCAGGAGTAGT+AGG 0.326814 1.3:+66500304 MS.gene005989:CDS
CGATCCCAAGGCAATGGTTC+TGG 0.330566 1.3:-66499704 None:intergenic
ACCATCAGCTTCCTCTTTCC+GGG 0.330924 1.3:+66506097 MS.gene005989:CDS
GGTGTCAATGGGTTGGGAAC+AGG 0.330991 1.3:+66500540 MS.gene005989:CDS
GTCCCTTTGGGCAGAGAGAT+TGG 0.336105 1.3:+66500340 MS.gene005989:CDS
AGAAACGTTTACAATGTTCT+TGG 0.336514 1.3:-66505165 None:intergenic
GATCCAAGTTCTGACGATTC+TGG 0.340629 1.3:+66502361 MS.gene005989:CDS
ATATGCGCCTACTGTCTATT+AGG 0.342728 1.3:+66503211 MS.gene005989:CDS
TCATGTTCAGGATTGAGTTT+TGG 0.342826 1.3:+66505871 MS.gene005989:CDS
GAATTCTCTTTATCACATCT+TGG 0.343466 1.3:-66500564 None:intergenic
ATGTCATTGCAGGTAATAAA+AGG 0.343646 1.3:+66504720 MS.gene005989:CDS
AGTGATGAGTTATGGTTATT+GGG 0.344144 1.3:+66506509 MS.gene005989:CDS
ATCTTTGTCAACAACACATT+GGG 0.345105 1.3:-66505749 None:intergenic
TGTTGGACATCAACCATAAA+TGG 0.346605 1.3:-66506795 None:intergenic
CGGTTTCCGAGGGTTCTTCT+GGG 0.347689 1.3:+66505680 MS.gene005989:CDS
GGTTTCGTCTGCTGGTAATA+TGG 0.348787 1.3:+66500908 MS.gene005989:CDS
CCTGTGGTCAATTCATGTTC+AGG 0.350434 1.3:+66505859 MS.gene005989:CDS
TCACGGGGTGATGGAAAATA+TGG 0.350524 1.3:+66500291 MS.gene005989:CDS
GGAAGATTCCTTCTGGGATA+TGG 0.350979 1.3:+66504749 MS.gene005989:CDS
AGGAAAGATGTTGGTAAGCT+AGG 0.352515 1.3:+66504590 MS.gene005989:CDS
TCCACCAATTCTGACAAGTA+TGG 0.354865 1.3:+66506993 MS.gene005989:CDS
GATACGAGGAAGATTCCTTC+TGG 0.357872 1.3:+66504742 MS.gene005989:CDS
ACCACCATACTTGTCAGAAT+TGG 0.361162 1.3:-66506997 None:intergenic
GGCGTGGATGATAAATTATT+GGG 0.361765 1.3:+66502178 MS.gene005989:intron
GATAAAAGCCCAAAAGTTAC+AGG 0.362840 1.3:+66500963 MS.gene005989:CDS
ACTGCTGTTGAGTCGCATTC+AGG 0.363531 1.3:+66500738 MS.gene005989:CDS
CAGCAATGGTTCTCCGAATC+TGG 0.364374 1.3:+66500383 MS.gene005989:CDS
GGCTCTGATGTTAGTGGAGT+TGG 0.365232 1.3:+66505532 MS.gene005989:CDS
TCAGTCAATGGAGTTGGCTT+GGG 0.365440 1.3:+66505580 MS.gene005989:CDS
CTTCAGTTTCTCAAAACATT+CGG 0.369777 1.3:-66504567 None:intergenic
TTGTTGGAACCAAGCTTAGA+TGG 0.371390 1.3:-66504226 None:intergenic
TCACCGAGATTTCAATCGTT+GGG 0.372835 1.3:+66499805 MS.gene005989:CDS
GTCATGGTTATGGTGTTTCT+CGG 0.379599 1.3:+66500226 MS.gene005989:CDS
TGCGGCCTCCTCGCCAGATT+CGG 0.380223 1.3:-66500396 None:intergenic
AGCTGACATTTCGAAGGTAT+TGG 0.381521 1.3:+66502426 MS.gene005989:CDS
TGGTGGCTGTTGCTCCAAAT+TGG 0.382082 1.3:-66506640 None:intergenic
CAAATCATTATGGCATTCTT+CGG 0.383357 1.3:+66506266 MS.gene005989:CDS
GATAATAGAGGAGGTCCCTT+TGG 0.386002 1.3:+66500327 MS.gene005989:CDS
TGCAGCTAAAACTAACTTGA+TGG 0.386341 1.3:+66504622 MS.gene005989:CDS
ATGAATAGCGTTGGAAGGCC+TGG 0.388096 1.3:+66506906 MS.gene005989:CDS
AAAGAAGCCTAGGCTTAATT+GGG 0.388409 1.3:+66500815 MS.gene005989:CDS
GCGAAGCGAAGTGAAGAAAA+TGG 0.390029 1.3:+66506378 MS.gene005989:CDS
ATCTACCAAGTTGGGGCTGA+TGG 0.391811 1.3:-66500943 None:intergenic
CCGCTTAAATGGACCCGATC+TGG 0.394661 1.3:+66500609 MS.gene005989:CDS
TGGTCGGCCGTTGGTTTCAC+GGG 0.394681 1.3:+66500275 MS.gene005989:CDS
AGCGGGGATCCGTTAATTCC+AGG 0.395073 1.3:-66505235 None:intergenic
AGGTTGGGTGATGTTACCTT+TGG 0.397131 1.3:+66502928 MS.gene005989:CDS
TCAGCATTCTGTGAAATATC+AGG 0.398068 1.3:-66505007 None:intergenic
TGCTGGGAGCCCGATGCTAC+TGG 0.398205 1.3:-66502529 None:intergenic
AATTCTCTTTATCACATCTT+GGG 0.398318 1.3:-66500563 None:intergenic
GCTAAGACGGGTGGTGTCAA+TGG 0.398998 1.3:+66500528 MS.gene005989:CDS
GGAGCAACAGCCACCATTGC+AGG 0.399343 1.3:+66506647 MS.gene005989:CDS
CAAAGTTCATATCTAGTAAT+GGG 0.400546 1.3:+66504360 MS.gene005989:CDS
TTCAGTCAATGGAGTTGGCT+TGG 0.405379 1.3:+66505579 MS.gene005989:CDS
CGTTCACGGTTTACTTTCCC+TGG 0.406845 1.3:+66503318 MS.gene005989:CDS
TCTTTGTTTGATCCTGGATC+AGG 0.408096 1.3:-66500879 None:intergenic
TGTTAGAGATGATGAATCTT+GGG 0.408557 1.3:+66507034 MS.gene005989:CDS
GGAGTGTGGTTCTGTTGCTT+TGG 0.409009 1.3:+66505651 MS.gene005989:CDS
GAAACGTTTACAATGTTCTT+GGG 0.410705 1.3:-66505164 None:intergenic
GAAGAGCCTGGTCATGGTTA+TGG 0.412010 1.3:+66500216 MS.gene005989:CDS
AGGTGTATTGACATCATTAC+AGG 0.412605 1.3:-66502890 None:intergenic
TTCTGAAGGTCATGGTAAGC+AGG 0.412638 1.3:+66500173 MS.gene005989:intron
GAGGGTGAGAGGAATATGTT+GGG 0.413695 1.3:-66500455 None:intergenic
GATGAATCTTGGGGAGGGAA+AGG 0.415709 1.3:+66507044 MS.gene005989:CDS
AGCTAACAAGAAAGAAGAAT+CGG 0.415727 1.3:-66506577 None:intergenic
AACCCCATACCTGGAATTAA+CGG 0.417746 1.3:+66505226 MS.gene005989:CDS
CCTTCCTTGCTGCTGCAAGC+TGG 0.418008 1.3:-66506871 None:intergenic
GATGGCTCGGTTTCGTCTGC+TGG 0.419173 1.3:+66500900 MS.gene005989:CDS
ACATTCTTTGGGAACTAACT+TGG 0.419764 1.3:-66503040 None:intergenic
ATGGTCGGCCGTTGGTTTCA+CGG 0.422035 1.3:+66500274 MS.gene005989:CDS
GAGCCATCTTTGTTTGATCC+TGG 0.423467 1.3:-66500885 None:intergenic
ATGGTCATTTCAAATCATTA+TGG 0.423776 1.3:+66506256 MS.gene005989:CDS
AGAAGACTTGTTGTTCAACT+TGG 0.425156 1.3:-66506412 None:intergenic
AGCTTGTCTTCTCGAGGCTC+AGG 0.425759 1.3:+66500633 MS.gene005989:CDS
AATGGTGATGTGAAACTGTT+TGG 0.427428 1.3:+66506309 MS.gene005989:CDS
GTTTCCTTGTTACCATCTAC+AGG 0.428077 1.3:-66504941 None:intergenic
TGAGACTGTTAGTGTTCTCC+AGG 0.428385 1.3:+66506128 MS.gene005989:CDS
TTATCTTAACCTTGATAAGT+TGG 0.430042 1.3:+66502282 MS.gene005989:CDS
AAATTAATAATCTCTGTTGT+TGG 0.431752 1.3:-66504242 None:intergenic
ATCAATTGAACTTGTTATGC+AGG 0.433645 1.3:-66504918 None:intergenic
GTGGTTGATGCTGATAAGTC+TGG 0.434207 1.3:+66505322 MS.gene005989:CDS
AGTTCAATTGATCCTGTAGA+TGG 0.436874 1.3:+66504929 MS.gene005989:CDS
AGCAAGACTCGGAAATGTCT+TGG 0.437017 1.3:+66505190 MS.gene005989:CDS
ACCATAAATGGCTGAACTTG+TGG 0.437682 1.3:-66506783 None:intergenic
ATAATAGAGGAGGTCCCTTT+GGG 0.438287 1.3:+66500328 MS.gene005989:CDS
ACCGATCTTCCATTCGTTCA+CGG 0.438862 1.3:+66503304 MS.gene005989:CDS
TGCTGCTGCAGCTGATGTAT+TGG 0.439293 1.3:+66504856 MS.gene005989:CDS
TTGACTGATTCACCTGCTCC+TGG 0.441023 1.3:+66502235 MS.gene005989:CDS
TTGTTAGAGATGATGAATCT+TGG 0.442358 1.3:+66507033 MS.gene005989:CDS
ATGAATCTTGGGGAGGGAAA+GGG 0.443546 1.3:+66507045 MS.gene005989:CDS
CTGCAGTTGTCTTGTGATCA+AGG 0.444878 1.3:-66504511 None:intergenic
GACAAGTCTGGTTCAGTCAA+TGG 0.447114 1.3:+66505568 MS.gene005989:CDS
TGAGGGTGAGAGGAATATGT+TGG 0.447337 1.3:-66500456 None:intergenic
TCTCAAAACATTCGGATTTG+TGG 0.447544 1.3:-66504559 None:intergenic
ACGGGTGGTGTCAATGGGTT+GGG 0.447912 1.3:+66500534 MS.gene005989:CDS
TGAAGAGCCCAAACTATTCA+AGG 0.448312 1.3:-66502314 None:intergenic
GATAAATTATTGGGGAAGGC+TGG 0.449258 1.3:+66502187 MS.gene005989:CDS
GAGGGAAAGGGGACTTAGGC+AGG 0.449466 1.3:+66507057 MS.gene005989:CDS
GGAAAGATGTTGGTAAGCTA+GGG 0.450009 1.3:+66504591 MS.gene005989:CDS
AGTAGCTCGAGGAGCATGGC+TGG 0.453210 1.3:+66500669 MS.gene005989:CDS
AAAACTAACTTGATGGCATC+AGG 0.454263 1.3:+66504629 MS.gene005989:CDS
GAACTGCAGGCAACGGAAGA+TGG 0.455019 1.3:-66501014 None:intergenic
CTGACGATTCTGGTCTAGTT+CGG 0.455056 1.3:+66502371 MS.gene005989:CDS
AGAAGACAAGCTTCCAGATC+GGG 0.458937 1.3:-66500622 None:intergenic
ATTCTTTGAGTTCAATTGAC+TGG 0.459365 1.3:+66500583 MS.gene005989:CDS
GGATCCGTTAATTCCAGGTA+TGG 0.459531 1.3:-66505230 None:intergenic
CGTTGGCTATTGAGAAAGAA+AGG 0.460426 1.3:+66504396 MS.gene005989:CDS
CAGATTCGGAGAACCATTGC+TGG 0.462288 1.3:-66500382 None:intergenic
CTGCTGTTGAGTCGCATTCA+GGG 0.462388 1.3:+66500739 MS.gene005989:CDS
GCTCGTAGCTTCCAGAGGAT+TGG 0.462557 1.3:-66505401 None:intergenic
ACTGTCTATGAGTGATCTTC+AGG 0.462908 1.3:+66505939 MS.gene005989:CDS
GTGATGGCAGATGTCATTGC+AGG 0.463020 1.3:+66504710 MS.gene005989:CDS
GGATCGTAAGGACTTCTTCA+AGG 0.463484 1.3:+66499721 MS.gene005989:CDS
CAGTTTCTTCAAGTGATACC+AGG 0.465844 1.3:+66502773 MS.gene005989:CDS
GCAGCAAGGAAGGGGAATGA+TGG 0.468489 1.3:+66506881 MS.gene005989:CDS
ATTCATTTAATTTAGCAGAC+AGG 0.468724 1.3:-66505423 None:intergenic
AGGATCGTGCAGCGGTGTCT+CGG 0.469170 1.3:+66506941 MS.gene005989:CDS
ATCCCCAACGATTGAAATCT+CGG 0.472130 1.3:-66499808 None:intergenic
AAAGAAGAATCGGGCAAGGA+TGG 0.476975 1.3:-66506567 None:intergenic
TGTTGTTCAACTTGGGATGA+TGG 0.477023 1.3:-66506404 None:intergenic
AGACCAGAATCGTCAGAACT+TGG 0.478327 1.3:-66502364 None:intergenic
TGGAAGGCCTGGGATTCTAG+TGG 0.478834 1.3:+66506917 MS.gene005989:CDS
CCAGCTTGCAGCAGCAAGGA+AGG 0.479058 1.3:+66506871 MS.gene005989:CDS
GACGGGTGGTGTCAATGGGT+TGG 0.479711 1.3:+66500533 MS.gene005989:CDS
GACAAGTATGGTGGTCAAAA+CGG 0.480761 1.3:+66507005 MS.gene005989:CDS
AGAATACATCTTGTCGGTGT+TGG 0.482064 1.3:-66506812 None:intergenic
CAGCAACTTATTAATAGCAT+TGG 0.483219 1.3:-66502395 None:intergenic
CCGTTGGTTTCACGGGGTGA+TGG 0.483991 1.3:+66500282 MS.gene005989:CDS
GCCGCCAGAACCATTGCCTT+GGG 0.484019 1.3:+66499700 MS.gene005989:CDS
CAAACTTATGTTCTAGCTAC+GGG 0.485314 1.3:+66502953 MS.gene005989:CDS
AATTTAGAAGTTGCTGATCC+AGG 0.485527 1.3:-66502724 None:intergenic
TTGACACTCTTGGGGATGAA+AGG 0.487394 1.3:+66504828 MS.gene005989:CDS
ATCTCAGTGTCCAGTAGCAT+CGG 0.487814 1.3:+66502519 MS.gene005989:CDS
TTCTGTTGCTTTGGATAGAA+CGG 0.488429 1.3:+66505660 MS.gene005989:CDS
TTCATCATGGAATGTATTCA+AGG 0.488797 1.3:-66505377 None:intergenic
ATGAGTTATGGTTATTGGGA+AGG 0.489537 1.3:+66506513 MS.gene005989:CDS
GTTTCCTCTTCGACCCCAAA+AGG 0.490290 1.3:+66506221 MS.gene005989:CDS
TGCCGCCAGAACCATTGCCT+TGG 0.491813 1.3:+66499699 MS.gene005989:CDS
GCAATACAAAGTAGACAGTC+TGG 0.491815 1.3:+66506540 MS.gene005989:CDS
ACCATACTTGTCAGAATTGG+TGG 0.492167 1.3:-66506994 None:intergenic
GGTTATGGTGTTTCTCGGTC+CGG 0.492761 1.3:+66500231 MS.gene005989:CDS
TGCTACATAAATTAGTTGAC+TGG 0.493083 1.3:-66502666 None:intergenic
ACAAAGTTCATATCTAGTAA+TGG 0.493234 1.3:+66504359 MS.gene005989:CDS
CATTTGCATCATCATTCAGC+GGG 0.493721 1.3:-66505252 None:intergenic
AAGCTAGGCTCTGATGTTAG+TGG 0.494092 1.3:+66505526 MS.gene005989:CDS
GCAACGGAAGATGGAGTTGA+AGG 0.494684 1.3:-66501005 None:intergenic
TTGAACTGCTATCTGCCTGC+TGG 0.495512 1.3:-66502546 None:intergenic
AATAGTGAACGGCATTTGAC+TGG 0.496893 1.3:+66506681 MS.gene005989:CDS
TGACACTCTTGGGGATGAAA+GGG 0.497560 1.3:+66504829 MS.gene005989:CDS
ATCACCGAGATTTCAATCGT+TGG 0.498754 1.3:+66499804 MS.gene005989:CDS
ATACGAGGAAGATTCCTTCT+GGG 0.499616 1.3:+66504743 MS.gene005989:CDS
ATTCTGAGTGGAAGATGGAT+TGG 0.500553 1.3:-66506343 None:intergenic
GTTCTTCATATTACTGCTAC+AGG 0.501063 1.3:-66503283 None:intergenic
AAAGTTGATGTACCTGATCC+AGG 0.501734 1.3:+66500867 MS.gene005989:CDS
GAGATGATGAATCTTGGGGA+GGG 0.502192 1.3:+66507039 MS.gene005989:CDS
TGAATAGCGTTGGAAGGCCT+GGG 0.502795 1.3:+66506907 MS.gene005989:CDS
GATCCGTTAATTCCAGGTAT+GGG 0.503607 1.3:-66505229 None:intergenic
AGTAGCATCGGGCTCCCAGC+AGG 0.503651 1.3:+66502531 MS.gene005989:CDS
TATTAATGCAGGCATCTTCA+AGG 0.504328 1.3:-66504312 None:intergenic
CATCTTTGTCAACAACACAT+TGG 0.504959 1.3:-66505750 None:intergenic
ATGTGAGAAAACAGTTAGCC+AGG 0.506100 1.3:+66506002 MS.gene005989:CDS
GGTTAAGATAAAACTTCTGC+AGG 0.506275 1.3:-66502270 None:intergenic
CCATGATGAATCCAATCCTC+TGG 0.507935 1.3:+66505390 MS.gene005989:CDS
AGAACATAAGTTTGCTCCAA+AGG 0.508399 1.3:-66502944 None:intergenic
GCTGCAGCTGATGTATTGGC+TGG 0.508616 1.3:+66504860 MS.gene005989:CDS
CTCCAATCTCTCTGCCCAAA+GGG 0.509486 1.3:-66500342 None:intergenic
AATCTTGAAAACCCCATACC+TGG 0.511274 1.3:+66505217 MS.gene005989:CDS
TACAGAAGTAAAGGATAGGT+TGG 0.511708 1.3:+66502912 MS.gene005989:CDS
AAGTCTCTCAGAAGGTCATT+CGG 0.514342 1.3:+66502590 MS.gene005989:CDS
TGGGGAGGGAAAGGGGACTT+AGG 0.514968 1.3:+66507053 MS.gene005989:CDS
TGAATCTTGGGGAGGGAAAG+GGG 0.515480 1.3:+66507046 MS.gene005989:CDS
AACAGTCTCAACATGGCTCC+CGG 0.515507 1.3:-66506115 None:intergenic
TCGGTCCGGCGACAAGATGT+TGG 0.517924 1.3:+66500245 MS.gene005989:CDS
GTTTCCGAGGGTTCTTCTGG+GGG 0.518112 1.3:+66505682 MS.gene005989:CDS
TTGTGCACAACTGACAAGTC+TGG 0.519383 1.3:+66505556 MS.gene005989:CDS
TTCTCGTCCAATATTAATGC+AGG 0.519652 1.3:-66504323 None:intergenic
TCCTCTACTTGTGATATTCA+GGG 0.519734 1.3:+66506033 MS.gene005989:CDS
GTCTCTAAAATCTGAATCTG+TGG 0.520565 1.3:+66502492 MS.gene005989:CDS
AGCTTGCAGCAGCAAGGAAG+GGG 0.521568 1.3:+66506873 MS.gene005989:CDS
TCTCAGAGAATACATCTTGT+CGG 0.522774 1.3:-66506818 None:intergenic
AAGTAGAGGACAGTCGATCC+TGG 0.523476 1.3:-66506020 None:intergenic
CTAGAAGTTGCATCTTCAGA+CGG 0.523948 1.3:-66500792 None:intergenic
TGAGTTATGGTTATTGGGAA+GGG 0.524318 1.3:+66506514 MS.gene005989:CDS
GAAGACTTGTTGTTCAACTT+GGG 0.524646 1.3:-66506411 None:intergenic
ATGGTAATGTAAAAGCATCA+AGG 0.524753 1.3:+66504768 MS.gene005989:CDS
AGGAGGTCGGCTGCGAAACT+CGG 0.524874 1.3:-66499834 None:intergenic
GTTGCCTGCAGTTCCTCACC+AGG 0.525585 1.3:+66501023 MS.gene005989:CDS
GAGTTTCGCAGCCGACCTCC+TGG 0.525669 1.3:+66499836 MS.gene005989:CDS
TGCATTAATATTGGACGAGA+AGG 0.526316 1.3:+66504325 MS.gene005989:CDS
TTCTTTCCACAAGTGATGCA+AGG 0.527030 1.3:-66503187 None:intergenic
CAATACACCTACAGAAGTAA+AGG 0.527076 1.3:+66502903 MS.gene005989:CDS
AGTCAACATCCAACTTATCA+AGG 0.527155 1.3:-66502291 None:intergenic
ATAGACAGTGCTGACGTATG+AGG 0.527339 1.3:-66505925 None:intergenic
GCAACAGAACCACACTCCCT+TGG 0.527610 1.3:-66505646 None:intergenic
GGGGCTATGATAACTTATCA+AGG 0.527951 1.3:+66502794 MS.gene005989:CDS
CAATAACCATAACTCATCAC+TGG 0.528467 1.3:-66506507 None:intergenic
TGCAGGAGATTCTGAAAACC+AGG 0.528559 1.3:-66502253 None:intergenic
ATTAATGTTGAATCTAAGCT+AGG 0.529004 1.3:+66505511 MS.gene005989:CDS
AAAGGGGTATGATCAATCCT+TGG 0.529771 1.3:+66504414 MS.gene005989:CDS
GGTTTCCGAGGGTTCTTCTG+GGG 0.530133 1.3:+66505681 MS.gene005989:CDS
CTGTGAAATATCAGGTGTCA+AGG 0.530637 1.3:-66504999 None:intergenic
CGGTTGGCTCTGTGGCGAGA+TGG 0.532541 1.3:+66499768 MS.gene005989:CDS
ACCATTGCCTTGGGATCGTA+AGG 0.532809 1.3:+66499709 MS.gene005989:CDS
GACAAGATGTTGGAGGAAGA+TGG 0.532959 1.3:+66500255 MS.gene005989:CDS
GTCAATGGAGTTGGCTTGGG+AGG 0.533146 1.3:+66505583 MS.gene005989:CDS
TCAAAGCCTTGCATCACTTG+TGG 0.533178 1.3:+66503181 MS.gene005989:CDS
TCTGGTTCAGTCAATGGAGT+TGG 0.533428 1.3:+66505574 MS.gene005989:CDS
GCCTAGGCTTAATTGGGGCG+AGG 0.533789 1.3:+66500821 MS.gene005989:CDS
CCAGAGGATTGGATTCATCA+TGG 0.534328 1.3:-66505390 None:intergenic
GTTGTTCAACTTGGGATGAT+GGG 0.534350 1.3:-66506403 None:intergenic
ATAGGATTCTGAGTGGAAGA+TGG 0.534964 1.3:-66506348 None:intergenic
CCGTTCACTATTCTTGGCAA+AGG 0.535805 1.3:-66506670 None:intergenic
AACATTAATTGCACAAACAA+CGG 0.536070 1.3:-66505497 None:intergenic
GTTAAACATATAGCAGATGC+AGG 0.536991 1.3:+66505772 MS.gene005989:CDS
ATTGGACGAGAAGGAGAAGA+TGG 0.537020 1.3:+66504334 MS.gene005989:CDS
GCAAACTTATGTTCTAGCTA+CGG 0.537028 1.3:+66502952 MS.gene005989:CDS
TCTTTCTCTTCTGATGTCCA+AGG 0.537333 1.3:-66504431 None:intergenic
GAAGCACGAAAGGTCTGAAT+CGG 0.537437 1.3:+66499748 MS.gene005989:CDS
ATCCGTTAATTCCAGGTATG+GGG 0.537624 1.3:-66505228 None:intergenic
ACCGTGAACGAATGGAAGAT+CGG 0.538465 1.3:-66503305 None:intergenic
GAAGAGGATATCGATAGTCC+TGG 0.538876 1.3:+66502706 MS.gene005989:CDS
AGCTGGAAACCATCTAAGCT+TGG 0.539705 1.3:+66504217 MS.gene005989:intron
GGAGGAAGATGGTCGGCCGT+TGG 0.540003 1.3:+66500266 MS.gene005989:CDS
GAAAGACCAGCATGCTAAGA+CGG 0.540480 1.3:+66500515 MS.gene005989:CDS
AGGAGTAGTAGGGATAATAG+AGG 0.540574 1.3:+66500315 MS.gene005989:CDS
CAGCAAGGAAGGGGAATGAT+GGG 0.541066 1.3:+66506882 MS.gene005989:CDS
TGAACTGCTATCTGCCTGCT+GGG 0.541534 1.3:-66502545 None:intergenic
GCTGGGACAGATTCCTATGA+AGG 0.541730 1.3:+66500687 MS.gene005989:CDS
TCAACATGGCTCCCGGAAAG+AGG 0.542615 1.3:-66506108 None:intergenic
AAAATATGGCAGGAGTAGTA+GGG 0.544190 1.3:+66500305 MS.gene005989:CDS
TGCTCATTATTCATATCTTG+CGG 0.545208 1.3:-66500414 None:intergenic
GAGATTGGAGAGGTCATTCG+TGG 0.545466 1.3:+66500355 MS.gene005989:CDS
GCTAACAAGAAAGAAGAATC+GGG 0.545527 1.3:-66506576 None:intergenic
TTGGCAAAGGCCTGCAATGG+TGG 0.545722 1.3:-66506657 None:intergenic
GTTCATATCTAGTAATGGGC+TGG 0.546102 1.3:+66504364 MS.gene005989:CDS
AAGAAGAATCGGGCAAGGAT+GGG 0.548268 1.3:-66506566 None:intergenic
TTCCTCCAACATCTTGTCGC+CGG 0.549490 1.3:-66500250 None:intergenic
AAACTGAAGAGGAAAGATGT+TGG 0.549660 1.3:+66504581 MS.gene005989:CDS
TATTCAAGGCATCAGAAGGC+AGG 0.549966 1.3:-66505363 None:intergenic
CACCACCCGTCTTAGCATGC+TGG 0.550683 1.3:-66500521 None:intergenic
GTTGGCTATTGAGAAAGAAA+GGG 0.551049 1.3:+66504397 MS.gene005989:CDS
ACAGAAGTAAAGGATAGGTT+GGG 0.552164 1.3:+66502913 MS.gene005989:CDS
AAAGACCAGCATGCTAAGAC+GGG 0.552821 1.3:+66500516 MS.gene005989:CDS
GAAAGTAAACCGTGAACGAA+TGG 0.553046 1.3:-66503313 None:intergenic
GATATGCGGTGTCATAGCTC+TGG 0.553528 1.3:+66506063 MS.gene005989:CDS
TCTCAGTGTCCAGTAGCATC+GGG 0.555774 1.3:+66502520 MS.gene005989:CDS
AGATTCTGAAAACCAGGAGC+AGG 0.555784 1.3:-66502247 None:intergenic
GCACCTGCATGGAATAGCCC+TGG 0.557999 1.3:-66506146 None:intergenic
TAGTTCCATCAGCCCCAACT+TGG 0.558863 1.3:+66500938 MS.gene005989:CDS
ATGATGGGAATGAATAGCGT+TGG 0.559006 1.3:+66506897 MS.gene005989:CDS
GTGTTTACAAAATCAGAATG+AGG 0.559104 1.3:-66500474 None:intergenic
TGGTAATGTAAAAGCATCAA+GGG 0.559402 1.3:+66504769 MS.gene005989:CDS
CTTTCTTTCTCAATAGCCAA+CGG 0.560032 1.3:-66504395 None:intergenic
TTTACAGCTAGAGACATGAA+TGG 0.560221 1.3:+66506714 MS.gene005989:CDS
TCATGAAAATGACAAGGAAG+AGG 0.560363 1.3:+66502690 MS.gene005989:CDS
GGAAGGCCTGGGATTCTAGT+GGG 0.564767 1.3:+66506918 MS.gene005989:CDS
GATGTATTGGCTGGTATATG+TGG 0.564852 1.3:+66504869 MS.gene005989:CDS
CCTAGGCTTAATTGGGGCGA+GGG 0.565007 1.3:+66500822 MS.gene005989:CDS
TCTCCAGGGCTATTCCATGC+AGG 0.565245 1.3:+66506143 MS.gene005989:CDS
CTAAGACGGGTGGTGTCAAT+GGG 0.566536 1.3:+66500529 MS.gene005989:CDS
CCAGATCGGGTCCATTTAAG+CGG 0.567623 1.3:-66500609 None:intergenic
ATTTGTTGAGCCTCTGCCGT+TGG 0.567900 1.3:+66502744 MS.gene005989:CDS
AACGTTTCTTCAGCAAGACT+CGG 0.568747 1.3:+66505179 MS.gene005989:CDS
AATGTTCCAGTGATGAGTTA+TGG 0.569272 1.3:+66506501 MS.gene005989:CDS
TTGGATAGAACGGTTTCCGA+GGG 0.569559 1.3:+66505670 MS.gene005989:CDS
GTCTTGGAAATGAAGTGGAA+AGG 0.569665 1.3:+66505710 MS.gene005989:CDS
CAGCTTGCAGCAGCAAGGAA+GGG 0.571221 1.3:+66506872 MS.gene005989:CDS
GCTACATAAATTAGTTGACT+GGG 0.571883 1.3:-66502665 None:intergenic
GGATAAGTACTAAACGCAGC+AGG 0.572186 1.3:-66506606 None:intergenic
CAGATGTTTAGAGGTAGAGA+TGG 0.572342 1.3:+66506759 MS.gene005989:CDS
CATACCTGGTGAGGAACTGC+AGG 0.572791 1.3:-66501027 None:intergenic
GAGAAGACAAGCTTCCAGAT+CGG 0.573380 1.3:-66500623 None:intergenic
GTCTGAATCGGTTGGCTCTG+TGG 0.573553 1.3:+66499760 MS.gene005989:CDS
TTCAGAAATAATTAAACCAA+GGG 0.573712 1.3:+66505630 MS.gene005989:CDS
CTCAAGTAGCTCGAGGAGCA+TGG 0.574631 1.3:+66500665 MS.gene005989:CDS
CACGAAAGGTCTGAATCGGT+TGG 0.575571 1.3:+66499752 MS.gene005989:CDS
ATCTCCAGCTTGCAGCAGCA+AGG 0.576061 1.3:+66506867 MS.gene005989:CDS
GGATGATAAATTATTGGGGA+AGG 0.576556 1.3:+66502183 MS.gene005989:CDS
GATCCTCCCACTAGAATCCC+AGG 0.576654 1.3:-66506924 None:intergenic
TGATAAGTTATCATAGCCCC+TGG 0.578026 1.3:-66502791 None:intergenic
GATCCAGGATCAAACAAAGA+TGG 0.579395 1.3:+66500882 MS.gene005989:CDS
TGTCATAGCTCTGGTAGTAA+TGG 0.581340 1.3:+66506072 MS.gene005989:CDS
TCTTTGTCTTGGAAATGAAG+TGG 0.581912 1.3:+66505705 MS.gene005989:CDS
CATTCGTGGGAGGCCAGCAA+TGG 0.581955 1.3:+66500369 MS.gene005989:CDS
CCCTCGCCCCAATTAAGCCT+AGG 0.583891 1.3:-66500822 None:intergenic
GTAGCTCGAGGAGCATGGCT+GGG 0.584317 1.3:+66500670 MS.gene005989:CDS
TTGCACAATCAATGTATGAG+AGG 0.584557 1.3:-66503100 None:intergenic
GTCATGGTAAGCAGGGTGGT+TGG 0.584666 1.3:+66500181 MS.gene005989:CDS
GTCCGGCGACAAGATGTTGG+AGG 0.584756 1.3:+66500248 MS.gene005989:CDS
TCCTTACGATCCCAAGGCAA+TGG 0.584959 1.3:-66499710 None:intergenic
AAAATCAGAATGAGGGTGAG+AGG 0.585225 1.3:-66500466 None:intergenic
TCAAGGAGAGGAAGCACGAA+AGG 0.585365 1.3:+66499738 MS.gene005989:CDS
TCTCCAATCTCTCTGCCCAA+AGG 0.586606 1.3:-66500343 None:intergenic
TTCTTGGCAAAGGCCTGCAA+TGG 0.587230 1.3:-66506660 None:intergenic
CAACTTCTAGAAAGAAGCCT+AGG 0.590054 1.3:+66500805 MS.gene005989:CDS
TTACATTACCATATCCCAGA+AGG 0.590383 1.3:-66504757 None:intergenic
CGGTGTCTCGGATCCTGTGG+CGG 0.590515 1.3:+66506953 MS.gene005989:CDS
GATGCATGTGTTGTTGAGGC+AGG 0.590672 1.3:+66505295 MS.gene005989:CDS
GGGGTGATGGAAAATATGGC+AGG 0.591231 1.3:+66500295 MS.gene005989:CDS
CCATCACCCCGTGAAACCAA+CGG 0.591923 1.3:-66500282 None:intergenic
AGATTGGAGAGGTCATTCGT+GGG 0.591957 1.3:+66500356 MS.gene005989:CDS
CACCGAGATTTCAATCGTTG+GGG 0.593291 1.3:+66499806 MS.gene005989:CDS
CTCATCATCTGTCCACTCAG+TGG 0.594983 1.3:-66505065 None:intergenic
AGGATCAAACAAAGATGGCT+CGG 0.595068 1.3:+66500887 MS.gene005989:CDS
AGAGATGATGAATCTTGGGG+AGG 0.596236 1.3:+66507038 MS.gene005989:CDS
TCTGAAGGTCATGGTAAGCA+GGG 0.597082 1.3:+66500174 MS.gene005989:intron
AAATGTTTCATTCTCACCTG+TGG 0.598857 1.3:+66505843 MS.gene005989:CDS
TGGGCTGGTTGAAGATCCGT+TGG 0.599359 1.3:+66504379 MS.gene005989:CDS
TCCCAAGGCAATGGTTCTGG+CGG 0.600227 1.3:-66499701 None:intergenic
CTTCAGAAATAATTAAACCA+AGG 0.600296 1.3:+66505629 MS.gene005989:CDS
AACCTATCCTTTACTTCTGT+AGG 0.600634 1.3:-66502910 None:intergenic
ACTGCATTTACCAACGGCAG+AGG 0.601116 1.3:-66502754 None:intergenic
TTTGGATAGAACGGTTTCCG+AGG 0.601407 1.3:+66505669 MS.gene005989:CDS
TCCCTGAATATCACAAGTAG+AGG 0.605259 1.3:-66506034 None:intergenic
GCGTGTTGAAGTCTCTCAGA+AGG 0.606141 1.3:+66502582 MS.gene005989:CDS
GACAGGCTCGTAGCTTCCAG+AGG 0.607368 1.3:-66505406 None:intergenic
CCGCTGAATGATGATGCAAA+TGG 0.607469 1.3:+66505253 MS.gene005989:CDS
TGTGAAATATCAGGTGTCAA+GGG 0.607676 1.3:-66504998 None:intergenic
TGGTGAGGAACTGCAGGCAA+CGG 0.608204 1.3:-66501021 None:intergenic
GGTAATGTAAAAGCATCAAG+GGG 0.609046 1.3:+66504770 MS.gene005989:CDS
AATGTATTCAAGGCATCAGA+AGG 0.612851 1.3:-66505367 None:intergenic
ATAATTAAACCAAGGGAGTG+TGG 0.613524 1.3:+66505637 MS.gene005989:CDS
CAGCGGTGTCTCGGATCCTG+TGG 0.615518 1.3:+66506950 MS.gene005989:CDS
CCATTTGCATCATCATTCAG+CGG 0.616674 1.3:-66505253 None:intergenic
TCTGGAAGCTTGTCTTCTCG+AGG 0.616741 1.3:+66500627 MS.gene005989:CDS
TGCTGTTGAGTCGCATTCAG+GGG 0.617927 1.3:+66500740 MS.gene005989:CDS
CAAGAAAGAAGAATCGGGCA+AGG 0.618773 1.3:-66506571 None:intergenic
TTTGAGTGCTGCTTCAGTGA+TGG 0.619670 1.3:+66504694 MS.gene005989:CDS
GCGAAGATATCACGGTGTGT+AGG 0.619795 1.3:+66505133 MS.gene005989:CDS
ATGAATCAAGAGAAATCAGT+GGG 0.621536 1.3:+66505440 MS.gene005989:CDS
CAAAAGGTCAAACAGACTGA+TGG 0.622931 1.3:+66506237 MS.gene005989:CDS
AGTAGTAGGGATAATAGAGG+AGG 0.623417 1.3:+66500318 MS.gene005989:CDS
AATGTAAAAGCATCAAGGGG+GGG 0.626962 1.3:+66504773 MS.gene005989:CDS
GGCATTTCCTAATAGACAGT+AGG 0.627767 1.3:-66503218 None:intergenic
TGTTTACAAAATCAGAATGA+GGG 0.628247 1.3:-66500473 None:intergenic
AAGAAGTCCTTACGATCCCA+AGG 0.628497 1.3:-66499716 None:intergenic
GAGACTGTTAGTGTTCTCCA+GGG 0.628665 1.3:+66506129 MS.gene005989:CDS
TCCAAATTGGAAGATGATGT+AGG 0.628761 1.3:-66506627 None:intergenic
GAAGAAACTGCATTTACCAA+CGG 0.629023 1.3:-66502760 None:intergenic
AGTTTCTTCAAGTGATACCA+GGG 0.630530 1.3:+66502774 MS.gene005989:CDS
TGATCCTGTAGATGGTAACA+AGG 0.631294 1.3:+66504937 MS.gene005989:CDS
ATGGAAAGCTGACATTTCGA+AGG 0.635530 1.3:+66502420 MS.gene005989:CDS
CACCTACAGAAGTAAAGGAT+AGG 0.637651 1.3:+66502908 MS.gene005989:CDS
CCTGAACATGAATTGACCAC+AGG 0.638814 1.3:-66505859 None:intergenic
GTAAGGACTTCTTCAAGGAG+AGG 0.639071 1.3:+66499726 MS.gene005989:CDS
TGGGAATGAATAGCGTTGGA+AGG 0.639308 1.3:+66506901 MS.gene005989:CDS
ATGGTTCTCCGAATCTGGCG+AGG 0.639536 1.3:+66500388 MS.gene005989:CDS
GGGCTATGATAACTTATCAA+GGG 0.641049 1.3:+66502795 MS.gene005989:CDS
GCTACACAACATACCTGGTG+AGG 0.641555 1.3:-66501036 None:intergenic
GTTAGAGATGATGAATCTTG+GGG 0.642876 1.3:+66507035 MS.gene005989:CDS
TCCCGGAAAGAGGAAGCTGA+TGG 0.643772 1.3:-66506098 None:intergenic
AGAAGATGTCACACATGCAG+TGG 0.646177 1.3:-66500766 None:intergenic
GCTGCGGCGAAGCCACTGAG+TGG 0.646796 1.3:+66505053 MS.gene005989:CDS
TTGGGGCTGATGGAACTACA+AGG 0.647188 1.3:-66500933 None:intergenic
AGATGTTGGAGGAAGATGGT+CGG 0.648607 1.3:+66500259 MS.gene005989:CDS
GGTCGGCCGTTGGTTTCACG+GGG 0.649865 1.3:+66500276 MS.gene005989:CDS
TGTTGTTGAGGCAGGCTCAG+TGG 0.652601 1.3:+66505303 MS.gene005989:CDS
TAAGTCACTCAAGTAGCTCG+AGG 0.655086 1.3:+66500658 MS.gene005989:CDS
GAAACACCATAACCATGACC+AGG 0.655883 1.3:-66500222 None:intergenic
ACGGAAACTAACCAGGAGGT+CGG 0.656486 1.3:-66499847 None:intergenic
GTTCTCCGAATCTGGCGAGG+AGG 0.658080 1.3:+66500391 MS.gene005989:CDS
TTGGAGAGGTCATTCGTGGG+AGG 0.658095 1.3:+66500359 MS.gene005989:CDS
ACCAATTCTGACAAGTATGG+TGG 0.661106 1.3:+66506996 MS.gene005989:CDS
ATGTCTTGAAAATGTAGATG+TGG 0.663001 1.3:+66505471 MS.gene005989:CDS
TAATGTAAAAGCATCAAGGG+GGG 0.663923 1.3:+66504772 MS.gene005989:CDS
AAGATATGAATAATGAGCAG+AGG 0.665208 1.3:+66500418 MS.gene005989:CDS
TGACGTATGAGGCTTTCCAA+AGG 0.666473 1.3:-66505914 None:intergenic
AGATGATGCATGTGTTGTTG+AGG 0.666528 1.3:+66505291 MS.gene005989:CDS
TTGGCTATTGAGAAAGAAAG+GGG 0.666838 1.3:+66504398 MS.gene005989:CDS
AATGAATCAAGAGAAATCAG+TGG 0.670379 1.3:+66505439 MS.gene005989:CDS
AAGAAGCCTAGGCTTAATTG+GGG 0.672278 1.3:+66500816 MS.gene005989:CDS
GAACACTAACAGTCTCAACA+TGG 0.675115 1.3:-66506122 None:intergenic
GACCAGCATGCTAAGACGGG+TGG 0.676227 1.3:+66500519 MS.gene005989:CDS
AGGGTGAGAGGAATATGTTG+GGG 0.681702 1.3:-66500454 None:intergenic
GTCTGGAAATAAAACAGACG+AGG 0.684383 1.3:+66505339 MS.gene005989:CDS
GCGTGGATGATAAATTATTG+GGG 0.684514 1.3:+66502179 MS.gene005989:CDS
AGGTCGGCTGCGAAACTCGG+CGG 0.684701 1.3:-66499831 None:intergenic
CTACATAAATTAGTTGACTG+GGG 0.688710 1.3:-66502664 None:intergenic
ACTTGTTCAGATGAGAGCTG+CGG 0.689285 1.3:+66505037 MS.gene005989:CDS
GAAGGTCATGGTAAGCAGGG+TGG 0.689827 1.3:+66500177 MS.gene005989:intron
TCTTTGTCAACAACACATTG+GGG 0.691202 1.3:-66505748 None:intergenic
CCTTTGCCAAGAATAGTGAA+CGG 0.691999 1.3:+66506670 MS.gene005989:CDS
TAGCATTCATGAAAATGACA+AGG 0.692115 1.3:+66502684 MS.gene005989:CDS
CTAGTGGGAGGATCGTGCAG+CGG 0.694460 1.3:+66506933 MS.gene005989:CDS
TTCAGGGAGGTAGAGATATG+CGG 0.697830 1.3:+66506049 MS.gene005989:CDS
GTTTCTTCAAGTGATACCAG+GGG 0.700136 1.3:+66502775 MS.gene005989:CDS
GCAGGTAATAAAAGGATACG+AGG 0.700512 1.3:+66504728 MS.gene005989:CDS
AGGCCTGGGATTCTAGTGGG+AGG 0.700557 1.3:+66506921 MS.gene005989:CDS
GTAATGTAAAAGCATCAAGG+GGG 0.714706 1.3:+66504771 MS.gene005989:CDS
AAGTATGGTGGTCAAAACGG+AGG 0.720416 1.3:+66507008 MS.gene005989:CDS
TCTACTTGTGATATTCAGGG+AGG 0.726623 1.3:+66506036 MS.gene005989:CDS
CTGAATGATGATGCAAATGG+CGG 0.730584 1.3:+66505256 MS.gene005989:CDS
AAACTTATGTTCTAGCTACG+GGG 0.733759 1.3:+66502954 MS.gene005989:CDS
TTTGGGCAGAGAGATTGGAG+AGG 0.734229 1.3:+66500345 MS.gene005989:CDS
ATTTGCATCATCATTCAGCG+GGG 0.740297 1.3:-66505251 None:intergenic
AGTCAAAATAGGATTCTGAG+TGG 0.758621 1.3:-66506355 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr1.3 gene 66499698 66507082 66499698 ID=MS.gene005989
chr1.3 mRNA 66499698 66507082 66499698 ID=MS.gene005989.t1;Parent=MS.gene005989
chr1.3 exon 66499698 66499857 66499698 ID=MS.gene005989.t1.exon1;Parent=MS.gene005989.t1
chr1.3 CDS 66499698 66499857 66499698 ID=cds.MS.gene005989.t1;Parent=MS.gene005989.t1
chr1.3 exon 66500181 66501044 66500181 ID=MS.gene005989.t1.exon2;Parent=MS.gene005989.t1
chr1.3 CDS 66500181 66501044 66500181 ID=cds.MS.gene005989.t1;Parent=MS.gene005989.t1
chr1.3 exon 66502179 66503339 66502179 ID=MS.gene005989.t1.exon3;Parent=MS.gene005989.t1
chr1.3 CDS 66502179 66503339 66502179 ID=cds.MS.gene005989.t1;Parent=MS.gene005989.t1
chr1.3 exon 66504219 66507082 66504219 ID=MS.gene005989.t1.exon4;Parent=MS.gene005989.t1
chr1.3 CDS 66504219 66507082 66504219 ID=cds.MS.gene005989.t1;Parent=MS.gene005989.t1
Gene Sequence

>MS.gene005989

ATGCCGCCAGAACCATTGCCTTGGGATCGTAAGGACTTCTTCAAGGAGAGGAAGCACGAAAGGTCTGAATCGGTTGGCTCTGTGGCGAGATGGAGAGATTCTTCTCATCACCGAGATTTCAATCGTTGGGGATCCGCCGAGTTTCGCAGCCGACCTCCTGGTTAGTTTCCGTTCCTCCGCTCTCTTCCAATTCGTTATCTATGCTTTTGTTTAGTTTTTGCAGAAATTTGTTATTAGGTTTTGTTATTCTTTGCGTATTTGATATATTGTTGAAAATTTGAAACTGAAACCTGCGTTTAATTTTGAAGATCTGTGGCTATAGTTGTTTTCTTTAAGCTTTTTAAGAGAGGAGAGAATTTTTTTCAAGATTTCTTTGTTCTATTTTGTGTTTTTTTTTCCTTCTCTTTTTTTGTGGGTAGGAATATATACTTTGCTCGTGTTGATTTTTTTCTGTTTTCCTTTTTGTTCAAATATTTTCTGAAGGTCATGGTAAGCAGGGTGGTTGGCACATGTTTTCTGAAGAGCCTGGTCATGGTTATGGTGTTTCTCGGTCCGGCGACAAGATGTTGGAGGAAGATGGTCGGCCGTTGGTTTCACGGGGTGATGGAAAATATGGCAGGAGTAGTAGGGATAATAGAGGAGGTCCCTTTGGGCAGAGAGATTGGAGAGGTCATTCGTGGGAGGCCAGCAATGGTTCTCCGAATCTGGCGAGGAGGCCGCAAGATATGAATAATGAGCAGAGGTCAGTTGATGATTCCCCAACATATTCCTCTCACCCTCATTCTGATTTTGTAAACACTTGGGAGCAGCATAACTTGAAAGACCAGCATGCTAAGACGGGTGGTGTCAATGGGTTGGGAACAGGCCCAAGATGTGATAAAGAGAATTCTTTGAGTTCAATTGACTGGAAGCCGCTTAAATGGACCCGATCTGGAAGCTTGTCTTCTCGAGGCTCAGGTTTAAGTCACTCAAGTAGCTCGAGGAGCATGGCTGGGACAGATTCCTATGAAGGAAAGCCCAATTTGAAACACAAAAATGTCACTGCTGTTGAGTCGCATTCAGGGGAAGCCACTGCATGTGTGACATCTTCTATGCCGTCTGAAGATGCAACTTCTAGAAAGAAGCCTAGGCTTAATTGGGGCGAGGGACTCGCAAAGTACGAGAAGAAAAAAGTTGATGTACCTGATCCAGGATCAAACAAAGATGGCTCGGTTTCGTCTGCTGGTAATATGGAGCCTTGTAGTTCCATCAGCCCCAACTTGGTAGATAAAAGCCCAAAAGTTACAGGATTTTCAGACTGTGCATCTCCTTCAACTCCATCTTCCGTTGCCTGCAGTTCCTCACCAGGTATGTTGTGTAGCTTTCTTTACTACTGTGTCAGATCCTTCTGTTGTAAGAGCAAAATGACAATTTAACTTATAGAATTTACTACTAACATCTGTTCGTGCAATGATTAATGTCTTGTTGTATCACATATAGGACTGTGTTTTGCGACATTGTGGTGTTTATCTTGGTGTTCGTGAATAACTGTCTGAAAGAGTAGTCAGATATTAGTTGCAATACTCTTTAGTTTTCACCACTGCTTTTTTTAGTTGCAATTTTAAGATTGGATTAGGTGTCTTTTGCTTCATTGATGTTTTCCTTTAACCGTAGTGATTTTCTCTTACCCTGTTATCTATTTCTAATCATCTTCCCTTCTTAATGTGTTTCTTCCATTAATAAAAAACGATTTCTTTCGTTGATGTTTCATTGTCCAGTTATCTTCGATTTTTGTTTCCGTTAATTTTCACTTTTAGGATGATACGGTCTCTCAACATGCGTACTCTTAATATGCCTCATTTCTCTGGCTTAATGAATTTCTTCTTTTATTGAAGAAGAGCAGGTTTGCTATGCTCTTTTGTTTGAAAATGTTTTTTAGGTGTATTATTCATTTAATAAGGAAAAAAACACTTTGAGGAGTCTAAGTTGAGTGGAAATCTGTTTTGGGCATATTTAATTGATTTATGGTGTTCACTAGAACTGACACTTGAACAGTTTTATTGCTGCCTTCAGTTTTCAAGTGATATTTAGATGCTGATCCTTGAACATGTATTGTGTCCCGACCTCTGCTTTTAAAACTAGGTAGTTTGAATAGGAAAATTGTACCTCAGGATATATCTTCTACAAACGGATTTCTATTTCGAGATAACTTGTCGAATAGAATGGTTAAACAAGGTCAATCTACTGACAGTTATTAGACTATTTGTTCTTAATTGTAAATATGGTTTGACATGATCTCCTATAATTGTTAAAACTATTGTTTTGGTCTCTTTATACTCTTACTTTGGCACGATAATTTTTCCCTGAGCTTAGATGAGAGATGATAATTTTGATTTCTCATTTGATTTTCCTGTCATAGCAATTGATGTATTACATGTACTGCTTGTGTTTACCCTGCATATATTATTTTTATGCCAAAACCTAACTTCAACCTTATTGCAGGCGTGGATGATAAATTATTGGGGAAGGCTGGAAATGCAGACAATGATGTCAGTAATTTGACTGATTCACCTGCTCCTGGTTTTCAGAATCTCCTGCAGAAGTTTTATCTTAACCTTGATAAGTTGGATGTTGACTCCTTGAATAGTTTGGGCTCTTCAATTGTTGAGTTAGTACAGTCTGATGATCCAAGTTCTGACGATTCTGGTCTAGTTCGGACCAATGCTATTAATAAGTTGCTGATATGGAAAGCTGACATTTCGAAGGTATTGGAGATGACTGAATCTGAAATTGATTTGCTTGAAAATGAACTGAAGTCTCTAAAATCTGAATCTGTGGATAGATCTCAGTGTCCAGTAGCATCGGGCTCCCAGCAGGCAGATAGCAGTTCAAAGTTTTACGAACAGCGTGTTGAAGTCTCTCAGAAGGTCATTCGGCCAGTACCATTGAAAATTATTTCTTCTGATGAACCCAATACAGTGAAGATGCCCCAGTCAACTAATTTATGTAGCATTCATGAAAATGACAAGGAAGAGGATATCGATAGTCCTGGATCAGCAACTTCTAAATTTGTTGAGCCTCTGCCGTTGGTAAATGCAGTTTCTTCAAGTGATACCAGGGGCTATGATAACTTATCAAGGGACATGAATGCTGTTCAATCTACTATGATGAAATGCTTTGTCCGCTGTAATAGGAAAAATACTAGTGTATCTGCCTGTAATGATGTCAATACACCTACAGAAGTAAAGGATAGGTTGGGTGATGTTACCTTTGGAGCAAACTTATGTTCTAGCTACGGGGATACTTATAAGTCAATTATTGCTTCAAATAAAGAATCTGCAAACAGAGCGCACAAAGTATTTACCAAGTTAGTTCCCAAAGAATGTAAAAAGCATGGTAACATGGGAGTCAGCAATGATTCGTCCTCTCATACATTGATTGTGCAAAAATTTGCCGAGAAAAAACGGTTTGAAAGATTTAAGGAGAGAGTTATTGCACTCAAGTTCAAAGCCTTGCATCACTTGTGGAAAGAAGATATGCGCCTACTGTCTATTAGGAAATGCCGCCCAAGATCGCATAAGAAAAATGAACTAAATGTGCGAACTACCTGTAGCAGTAATATGAAGAACCGATCTTCCATTCGTTCACGGTTTACTTTCCCTGGTATAGATCTTTCCCCCAAATCTTTTGCTTAACTTATTCCGGTGAATGTGATTTTGCATTGTCTTTCAATTTGATGCAGTTCAGTTATGTCATGTAGTTTACGAATGAGAATAAAAGAAATAATGACAGGGTGGTTGTTGATGTACTGAAATAGGTTTGTTTATATTAAGTTTACCTAAATACTCTTCTTAAGAGTATAAGAGCTTTGCAAAACCTTTTCAATTTGATTTTAAGACCTTTGAGAGTCGGTAAATTCTTTTAATACTTATAGTGTAAAATTGTTTACATGATTATCTGGCATATTATTTTTTGGTAAAAACAGCATAGTTAAATTATTTTCCTGTGTTTGATGTGTTGATATTATTTGGCTTTCCGTTAATTGTTATGGTGTACAGTTATTTCCGCAATTGGTTTTCATTACAACATTCTTTTGCATATTACTTTTTGGTAAATTACCATAGTTAAATTATATTTTTGCTGTTTGATGTGATGAGGATCTATGACTCCGTAGTTGCTTTTTTGTTGTCAAATTCTGATGGAAATAATTAAATACGATCAAGTGGCTCTGTGATGCTGACATCTCTGTCACAAGATGTGACTGTCTGTTTTTCTTTACCATGCAGCTTTTATTTTTCGTATGAAAAAAAGATTCTTTCAATTCTAATGTTCATTTTAATGCTATTTATACCTTCGACATAATATAGGGTAGATATTTGACCCGGGCTTGTACAAGATGATTGTATGTAATTTTAGAGTGGTGATACCTGTGATGATGATGTTTTATTTTATAGTTGTTTGTTGAGTTCCTAAAATATCTAATCTTTTTGTTGTGATGATTACTAAGTATTTTTCTCATTCTTCATTTTCCAATGAATGCAGCTGGAAACCATCTAAGCTTGGTTCCAACAACAGAGATTATTAATTTCACAAGCAAACTTCTGTCAGAATCTCAAGCACAACTTCAGAGAAACACCTTGAAGATGCCTGCATTAATATTGGACGAGAAGGAGAAGATGGTTACAAAGTTCATATCTAGTAATGGGCTGGTTGAAGATCCGTTGGCTATTGAGAAAGAAAGGGGTATGATCAATCCTTGGACATCAGAAGAGAAAGAATTATTCTTGAAGAAATTTGCTGCATTTGGAAAAGATTTCCGGAAAATTGCTTCTTTCCTTGATCACAAGACAACTGCAGACTGCGTTGAGTTCTACTACAAGAACCACAAATCCGAATGTTTTGAGAAACTGAAGAGGAAAGATGTTGGTAAGCTAGGGAAGTCATATGCAGCTAAAACTAACTTGATGGCATCAGGTAAAAAATGGAATCATGAAGTTAATGTTTCTTCACTTGATATTTTGAGTGCTGCTTCAGTGATGGCAGATGTCATTGCAGGTAATAAAAGGATACGAGGAAGATTCCTTCTGGGATATGGTAATGTAAAAGCATCAAGGGGGGGCGAGGACAGCATTATAGAGAGATCAAACAGTTTTGACACTCTTGGGGATGAAAGGGAGACTGCTGCTGCAGCTGATGTATTGGCTGGTATATGTGGTTCATTTTCATCTGAGGCTATGAGTTCCTGCATAACAAGTTCAATTGATCCTGTAGATGGTAACAAGGAAACGAAGTTCTTGAAAGCAAACCCTATATTCAAACAACCCTTGACACCTGATATTTCACAGAATGCTGATGATGAGACTTGTTCAGATGAGAGCTGCGGCGAAGCCACTGAGTGGACAGATGATGAGACAGCAGCTTTTCTTCAGGCTGTATCATCTTTTGGTAAGGATTTTGCGAAGATATCACGGTGTGTAGGTACAAAGACCCAAGAACATTGTAAACGTTTCTTCAGCAAGACTCGGAAATGTCTTGGATTGAATCTTGAAAACCCCATACCTGGAATTAACGGATCCCCGCTGAATGATGATGCAAATGGCGGTGAGAGTGATACAGATGATGCATGTGTTGTTGAGGCAGGCTCAGTGGTTGATGCTGATAAGTCTGGAAATAAAACAGACGAGGACCTGCCTTCTGATGCCTTGAATACATTCCATGATGAATCCAATCCTCTGGAAGCTACGAGCCTGTCTGCTAAATTAAATGAATCAAGAGAAATCAGTGGGACCGAAGTATGTCTTGAAAATGTAGATGTGGCTTCCGTTGTTTGTGCAATTAATGTTGAATCTAAGCTAGGCTCTGATGTTAGTGGAGTTGGCTTGTGCACAACTGACAAGTCTGGTTCAGTCAATGGAGTTGGCTTGGGAGGTACAGTTAGAGAATCTATTTCTGCTTCAGAAATAATTAAACCAAGGGAGTGTGGTTCTGTTGCTTTGGATAGAACGGTTTCCGAGGGTTCTTCTGGGGGTCTTTGTCTTGGAAATGAAGTGGAAAGGCAAAGAGTGTCAGCACCCCAATGTGTTGTTGACAAAGATGTTAAACATATAGCAGATGCAGGTGTTGTAGTTGAGTTGAAAAGCTGTGTCTTAGAATCGAGCACTGCAGCAAATGTTTCATTCTCACCTGTGGTCAATTCATGTTCAGGATTGAGTTTTGGTTCTGAAAATAAGCATGTCTCCTTTGGAAAGCCTCATACGTCAGCACTGTCTATGAGTGATCTTCAGGCAACTGCAAATTCATTGTTGCTAAAAGCTGCCGCTGCTCAATGTGAGAAAACAGTTAGCCAGGATCGACTGTCCTCTACTTGTGATATTCAGGGAGGTAGAGATATGCGGTGTCATAGCTCTGGTAGTAATGGTGACCATCAGCTTCCTCTTTCCGGGAGCCATGTTGAGACTGTTAGTGTTCTCCAGGGCTATTCCATGCAGGTGCCCATAAAAAAAGAAGTGGATGGGGATGTGAATTGCAGCAGTTCAGCAGCTGAGTTTCCTCTTCGACCCCAAAAGGTCAAACAGACTGATGGTCATTTCAAATCATTATGGCATTCTTCGGATTCAGAAAAAACATCCAGAAATGGTGATGTGAAACTGTTTGGAAAGATATTAACCAATCCATCTTCCACTCAGAATCCTATTTTGACTGCGAAGCGAAGTGAAGAAAATGGTTCCCATCATCCCAAGTTGAACAACAAGTCTTCTAATCTGAATTTTACTGGCCATCAAAATTCTGATGAAAATTTAAAATTTTTGAAGTTTGGCCTTGAAAATGTTCCAGTGATGAGTTATGGTTATTGGGAAGGGAATGCAATACAAAGTAGACAGTCTGGTCTCCCATCCTTGCCCGATTCTTCTTTCTTGTTAGCTAAATATCCTGCTGCGTTTAGTACTTATCCTACATCATCTTCCAATTTGGAGCAACAGCCACCATTGCAGGCCTTTGCCAAGAATAGTGAACGGCATTTGACTGGTGCATCTACTTTTACAGCTAGAGACATGAATGGCAGCAATGCGATGCTTGATTATCAGATGTTTAGAGGTAGAGATGGTCCACAAGTTCAGCCATTTATGGTTGATGTCCAACACCGACAAGATGTATTCTCTGAGATGCAGAGAAGAAACAGTTTTGAAGCAATCTCCAGCTTGCAGCAGCAAGGAAGGGGAATGATGGGAATGAATAGCGTTGGAAGGCCTGGGATTCTAGTGGGAGGATCGTGCAGCGGTGTCTCGGATCCTGTGGCGGCAATTAAAATGCATTATTCCACCAATTCTGACAAGTATGGTGGTCAAAACGGAGGTGTTGTTAGAGATGATGAATCTTGGGGAGGGAAAGGGGACTTAGGCAGGTAG
Protein sequence

>MS.gene005989.t1

MPPEPLPWDRKDFFKERKHERSESVGSVARWRDSSHHRDFNRWGSAEFRSRPPGHGKQGGWHMFSEEPGHGYGVSRSGDKMLEEDGRPLVSRGDGKYGRSSRDNRGGPFGQRDWRGHSWEASNGSPNLARRPQDMNNEQRSVDDSPTYSSHPHSDFVNTWEQHNLKDQHAKTGGVNGLGTGPRCDKENSLSSIDWKPLKWTRSGSLSSRGSGLSHSSSSRSMAGTDSYEGKPNLKHKNVTAVESHSGEATACVTSSMPSEDATSRKKPRLNWGEGLAKYEKKKVDVPDPGSNKDGSVSSAGNMEPCSSISPNLVDKSPKVTGFSDCASPSTPSSVACSSSPGVDDKLLGKAGNADNDVSNLTDSPAPGFQNLLQKFYLNLDKLDVDSLNSLGSSIVELVQSDDPSSDDSGLVRTNAINKLLIWKADISKVLEMTESEIDLLENELKSLKSESVDRSQCPVASGSQQADSSSKFYEQRVEVSQKVIRPVPLKIISSDEPNTVKMPQSTNLCSIHENDKEEDIDSPGSATSKFVEPLPLVNAVSSSDTRGYDNLSRDMNAVQSTMMKCFVRCNRKNTSVSACNDVNTPTEVKDRLGDVTFGANLCSSYGDTYKSIIASNKESANRAHKVFTKLVPKECKKHGNMGVSNDSSSHTLIVQKFAEKKRFERFKERVIALKFKALHHLWKEDMRLLSIRKCRPRSHKKNELNVRTTCSSNMKNRSSIRSRFTFPAGNHLSLVPTTEIINFTSKLLSESQAQLQRNTLKMPALILDEKEKMVTKFISSNGLVEDPLAIEKERGMINPWTSEEKELFLKKFAAFGKDFRKIASFLDHKTTADCVEFYYKNHKSECFEKLKRKDVGKLGKSYAAKTNLMASGKKWNHEVNVSSLDILSAASVMADVIAGNKRIRGRFLLGYGNVKASRGGEDSIIERSNSFDTLGDERETAAAADVLAGICGSFSSEAMSSCITSSIDPVDGNKETKFLKANPIFKQPLTPDISQNADDETCSDESCGEATEWTDDETAAFLQAVSSFGKDFAKISRCVGTKTQEHCKRFFSKTRKCLGLNLENPIPGINGSPLNDDANGGESDTDDACVVEAGSVVDADKSGNKTDEDLPSDALNTFHDESNPLEATSLSAKLNESREISGTEVCLENVDVASVVCAINVESKLGSDVSGVGLCTTDKSGSVNGVGLGGTVRESISASEIIKPRECGSVALDRTVSEGSSGGLCLGNEVERQRVSAPQCVVDKDVKHIADAGVVVELKSCVLESSTAANVSFSPVVNSCSGLSFGSENKHVSFGKPHTSALSMSDLQATANSLLLKAAAAQCEKTVSQDRLSSTCDIQGGRDMRCHSSGSNGDHQLPLSGSHVETVSVLQGYSMQVPIKKEVDGDVNCSSSAAEFPLRPQKVKQTDGHFKSLWHSSDSEKTSRNGDVKLFGKILTNPSSTQNPILTAKRSEENGSHHPKLNNKSSNLNFTGHQNSDENLKFLKFGLENVPVMSYGYWEGNAIQSRQSGLPSLPDSSFLLAKYPAAFSTYPTSSSNLEQQPPLQAFAKNSERHLTGASTFTARDMNGSNAMLDYQMFRGRDGPQVQPFMVDVQHRQDVFSEMQRRNSFEAISSLQQQGRGMMGMNSVGRPGILVGGSCSGVSDPVAAIKMHYSTNSDKYGGQNGGVVRDDESWGGKGDLGR