Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene006043.t1 | XP_024641473.1 | 95.1 | 163 | 7 | 1 | 1 | 162 | 1 | 163 | 4.20E-85 | 323.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene006043.t1 | Q9C8W9 | 81.2 | 149 | 28 | 0 | 14 | 162 | 5 | 153 | 3.6e-69 | 262.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene006043.t1 | A0A396JTC2 | 95.1 | 163 | 7 | 1 | 1 | 162 | 1 | 163 | 3.1e-85 | 323.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene006043.t1 | TF | NAC |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene006043.t1 | MTR_1g096430 | 96.689 | 151 | 5 | 0 | 12 | 162 | 1 | 151 | 4.38e-110 | 317 |
MS.gene006043.t1 | MTR_5g021710 | 78.523 | 149 | 32 | 0 | 14 | 162 | 4 | 152 | 2.95e-89 | 265 |
MS.gene006043.t1 | MTR_8g076110 | 75.168 | 149 | 37 | 0 | 14 | 162 | 2 | 150 | 2.03e-85 | 253 |
MS.gene006043.t1 | MTR_4g036030 | 73.510 | 151 | 40 | 0 | 12 | 162 | 1 | 151 | 6.54e-82 | 246 |
MS.gene006043.t1 | MTR_4g101680 | 67.683 | 164 | 44 | 1 | 12 | 166 | 1 | 164 | 1.75e-79 | 240 |
MS.gene006043.t1 | MTR_5g012080 | 69.281 | 153 | 45 | 2 | 12 | 162 | 1 | 153 | 2.33e-74 | 226 |
MS.gene006043.t1 | MTR_8g024480 | 74.453 | 137 | 35 | 0 | 9 | 145 | 6 | 142 | 3.77e-72 | 223 |
MS.gene006043.t1 | MTR_4g035590 | 73.438 | 128 | 34 | 0 | 18 | 145 | 8 | 135 | 6.99e-69 | 213 |
MS.gene006043.t1 | MTR_2g062730 | 73.485 | 132 | 34 | 1 | 15 | 145 | 7 | 138 | 1.17e-68 | 212 |
MS.gene006043.t1 | MTR_6g477900 | 61.654 | 133 | 50 | 1 | 18 | 150 | 6 | 137 | 1.64e-58 | 182 |
MS.gene006043.t1 | MTR_2g064090 | 61.481 | 135 | 51 | 1 | 18 | 152 | 6 | 139 | 2.36e-58 | 185 |
MS.gene006043.t1 | MTR_5g076850 | 63.281 | 128 | 46 | 1 | 18 | 145 | 6 | 132 | 3.68e-56 | 186 |
MS.gene006043.t1 | MTR_3g064580 | 57.857 | 140 | 58 | 1 | 17 | 156 | 5 | 143 | 1.71e-54 | 182 |
MS.gene006043.t1 | MTR_3g435150 | 58.594 | 128 | 50 | 1 | 18 | 145 | 16 | 140 | 2.28e-52 | 169 |
MS.gene006043.t1 | MTR_2g064470 | 54.930 | 142 | 58 | 3 | 14 | 155 | 7 | 142 | 4.28e-52 | 168 |
MS.gene006043.t1 | MTR_6g084430 | 53.623 | 138 | 61 | 1 | 14 | 151 | 1 | 135 | 4.80e-52 | 169 |
MS.gene006043.t1 | MTR_5g041940 | 52.381 | 147 | 64 | 2 | 18 | 164 | 3 | 143 | 9.69e-52 | 166 |
MS.gene006043.t1 | MTR_4g081870 | 54.610 | 141 | 56 | 2 | 16 | 151 | 7 | 144 | 1.06e-51 | 166 |
MS.gene006043.t1 | MTR_4g108760 | 51.974 | 152 | 68 | 2 | 9 | 158 | 8 | 156 | 1.07e-51 | 169 |
MS.gene006043.t1 | MTR_2g078700 | 56.154 | 130 | 52 | 2 | 18 | 145 | 23 | 149 | 9.29e-51 | 167 |
MS.gene006043.t1 | MTR_7g085220 | 51.429 | 140 | 56 | 2 | 15 | 145 | 5 | 141 | 1.77e-50 | 165 |
MS.gene006043.t1 | MTR_5g014300 | 54.815 | 135 | 53 | 2 | 18 | 145 | 6 | 139 | 1.94e-50 | 165 |
MS.gene006043.t1 | MTR_1g008740 | 56.716 | 134 | 52 | 3 | 15 | 145 | 10 | 140 | 2.58e-50 | 165 |
MS.gene006043.t1 | MTR_6g012670 | 57.812 | 128 | 51 | 1 | 18 | 145 | 20 | 144 | 3.03e-50 | 164 |
MS.gene006043.t1 | MTR_1g008740 | 56.716 | 134 | 52 | 3 | 15 | 145 | 24 | 154 | 3.22e-50 | 165 |
MS.gene006043.t1 | MTR_3g070030 | 50.318 | 157 | 71 | 3 | 1 | 153 | 1 | 154 | 3.51e-50 | 164 |
MS.gene006043.t1 | MTR_7g097090 | 52.414 | 145 | 63 | 3 | 13 | 155 | 5 | 145 | 6.69e-50 | 162 |
MS.gene006043.t1 | MTR_4g098630 | 55.639 | 133 | 55 | 2 | 16 | 145 | 4 | 135 | 8.63e-50 | 162 |
MS.gene006043.t1 | MTR_7g085260 | 55.303 | 132 | 52 | 2 | 18 | 145 | 17 | 145 | 2.10e-49 | 163 |
MS.gene006043.t1 | MTR_4g089135 | 51.773 | 141 | 63 | 2 | 7 | 145 | 4 | 141 | 6.98e-49 | 161 |
MS.gene006043.t1 | MTR_3g116070 | 53.061 | 147 | 53 | 4 | 15 | 153 | 20 | 158 | 7.51e-49 | 161 |
MS.gene006043.t1 | MTR_7g011130 | 52.740 | 146 | 65 | 2 | 1 | 145 | 1 | 143 | 8.80e-49 | 161 |
MS.gene006043.t1 | MTR_3g096920 | 55.224 | 134 | 56 | 2 | 12 | 145 | 1 | 130 | 1.31e-48 | 159 |
MS.gene006043.t1 | MTR_1g090720 | 56.589 | 129 | 55 | 1 | 16 | 144 | 40 | 167 | 3.24e-48 | 162 |
MS.gene006043.t1 | MTR_3g096920 | 55.224 | 134 | 56 | 2 | 12 | 145 | 1 | 130 | 3.33e-48 | 159 |
MS.gene006043.t1 | MTR_1g069805 | 51.724 | 145 | 64 | 3 | 13 | 155 | 5 | 145 | 3.80e-48 | 157 |
MS.gene006043.t1 | MTR_3g088110 | 54.478 | 134 | 57 | 2 | 12 | 145 | 1 | 130 | 5.48e-48 | 157 |
MS.gene006043.t1 | MTR_2g079990 | 53.906 | 128 | 56 | 1 | 18 | 145 | 16 | 140 | 7.30e-48 | 159 |
MS.gene006043.t1 | MTR_7g005280 | 50.340 | 147 | 65 | 2 | 18 | 162 | 15 | 155 | 7.40e-48 | 156 |
MS.gene006043.t1 | MTR_2g080010 | 51.064 | 141 | 64 | 2 | 7 | 145 | 4 | 141 | 9.24e-48 | 158 |
MS.gene006043.t1 | MTR_8g094580 | 55.469 | 128 | 53 | 2 | 18 | 145 | 7 | 130 | 1.08e-47 | 156 |
MS.gene006043.t1 | MTR_2g079990 | 53.906 | 128 | 56 | 1 | 18 | 145 | 16 | 140 | 1.38e-47 | 159 |
MS.gene006043.t1 | MTR_3g109340 | 52.632 | 133 | 58 | 2 | 15 | 145 | 19 | 148 | 1.38e-47 | 158 |
MS.gene006043.t1 | MTR_3g109340 | 52.632 | 133 | 58 | 2 | 15 | 145 | 19 | 148 | 1.44e-47 | 158 |
MS.gene006043.t1 | MTR_8g059170 | 53.125 | 128 | 57 | 1 | 18 | 145 | 14 | 138 | 3.54e-47 | 156 |
MS.gene006043.t1 | MTR_6g032770 | 52.308 | 130 | 57 | 2 | 18 | 145 | 18 | 144 | 4.76e-47 | 157 |
MS.gene006043.t1 | MTR_2157s0010 | 51.825 | 137 | 60 | 2 | 18 | 151 | 8 | 141 | 5.73e-47 | 154 |
MS.gene006043.t1 | MTR_2g093810 | 54.264 | 129 | 54 | 2 | 19 | 145 | 15 | 140 | 2.75e-46 | 154 |
MS.gene006043.t1 | MTR_7g011120 | 56.000 | 125 | 52 | 1 | 21 | 145 | 11 | 132 | 1.02e-45 | 152 |
MS.gene006043.t1 | MTR_6g011860 | 51.079 | 139 | 62 | 3 | 20 | 155 | 17 | 152 | 1.82e-45 | 153 |
MS.gene006043.t1 | MTR_7g100990 | 50.365 | 137 | 63 | 2 | 15 | 149 | 8 | 141 | 3.25e-45 | 151 |
MS.gene006043.t1 | MTR_3g096140 | 49.640 | 139 | 66 | 2 | 20 | 155 | 9 | 146 | 5.37e-45 | 149 |
MS.gene006043.t1 | MTR_8g063550 | 55.469 | 128 | 52 | 2 | 20 | 145 | 8 | 132 | 8.16e-45 | 150 |
MS.gene006043.t1 | MTR_8g467490 | 50.746 | 134 | 61 | 2 | 14 | 145 | 10 | 140 | 1.15e-44 | 151 |
MS.gene006043.t1 | MTR_3g093040 | 51.128 | 133 | 64 | 1 | 18 | 150 | 108 | 239 | 1.17e-44 | 149 |
MS.gene006043.t1 | MTR_5g040420 | 48.571 | 140 | 67 | 2 | 8 | 145 | 4 | 140 | 1.41e-44 | 151 |
MS.gene006043.t1 | MTR_1g097300 | 50.676 | 148 | 69 | 2 | 6 | 150 | 4 | 150 | 2.15e-44 | 154 |
MS.gene006043.t1 | MTR_8g063550 | 54.615 | 130 | 54 | 2 | 20 | 147 | 8 | 134 | 3.70e-44 | 150 |
MS.gene006043.t1 | MTR_5g069030 | 55.469 | 128 | 56 | 1 | 18 | 145 | 25 | 151 | 4.46e-44 | 154 |
MS.gene006043.t1 | MTR_3g096140 | 49.640 | 139 | 66 | 2 | 20 | 155 | 9 | 146 | 4.68e-44 | 149 |
MS.gene006043.t1 | MTR_8g063550 | 55.469 | 128 | 52 | 2 | 20 | 145 | 8 | 132 | 8.27e-44 | 150 |
MS.gene006043.t1 | MTR_3g093050 | 53.906 | 128 | 58 | 1 | 18 | 145 | 22 | 148 | 6.53e-43 | 150 |
MS.gene006043.t1 | MTR_3g093050 | 52.632 | 133 | 62 | 1 | 18 | 150 | 22 | 153 | 7.03e-43 | 150 |
MS.gene006043.t1 | MTR_1g090723 | 51.181 | 127 | 60 | 2 | 20 | 145 | 10 | 135 | 1.41e-42 | 149 |
MS.gene006043.t1 | MTR_1g090723 | 51.181 | 127 | 60 | 2 | 20 | 145 | 10 | 135 | 1.49e-42 | 149 |
MS.gene006043.t1 | MTR_0036s0150 | 52.756 | 127 | 58 | 2 | 20 | 145 | 7 | 132 | 3.55e-42 | 147 |
MS.gene006043.t1 | MTR_4g134460 | 50.000 | 130 | 61 | 2 | 17 | 145 | 53 | 179 | 3.88e-42 | 145 |
MS.gene006043.t1 | MTR_2g086880 | 46.429 | 140 | 72 | 2 | 6 | 144 | 5 | 142 | 9.77e-42 | 146 |
MS.gene006043.t1 | MTR_2g086880 | 47.143 | 140 | 71 | 2 | 6 | 144 | 5 | 142 | 1.35e-41 | 146 |
MS.gene006043.t1 | MTR_4g075980 | 50.725 | 138 | 62 | 2 | 11 | 145 | 8 | 142 | 1.90e-41 | 140 |
MS.gene006043.t1 | MTR_2g068880 | 49.640 | 139 | 63 | 3 | 12 | 145 | 15 | 151 | 3.16e-41 | 140 |
MS.gene006043.t1 | MTR_8g093580 | 53.125 | 128 | 55 | 2 | 20 | 145 | 8 | 132 | 4.39e-41 | 144 |
MS.gene006043.t1 | MTR_4g052620 | 46.753 | 154 | 75 | 4 | 14 | 160 | 1 | 154 | 5.02e-41 | 138 |
MS.gene006043.t1 | MTR_1g090723 | 51.181 | 127 | 60 | 2 | 20 | 145 | 10 | 135 | 1.28e-40 | 144 |
MS.gene006043.t1 | MTR_2g068920 | 48.551 | 138 | 65 | 2 | 12 | 145 | 15 | 150 | 1.29e-40 | 138 |
MS.gene006043.t1 | MTR_8g099750 | 50.769 | 130 | 57 | 2 | 18 | 145 | 14 | 138 | 1.62e-40 | 136 |
MS.gene006043.t1 | MTR_5g090970 | 47.015 | 134 | 65 | 2 | 15 | 145 | 15 | 145 | 5.14e-39 | 134 |
MS.gene006043.t1 | MTR_3g070040 | 47.482 | 139 | 59 | 2 | 22 | 152 | 12 | 144 | 1.06e-38 | 134 |
MS.gene006043.t1 | MTR_5g090970 | 47.015 | 134 | 64 | 3 | 15 | 145 | 15 | 144 | 1.71e-37 | 130 |
MS.gene006043.t1 | MTR_3g098810 | 46.212 | 132 | 62 | 2 | 18 | 145 | 14 | 140 | 2.53e-37 | 126 |
MS.gene006043.t1 | MTR_2g086690 | 46.000 | 150 | 67 | 6 | 19 | 157 | 5 | 151 | 8.42e-37 | 127 |
MS.gene006043.t1 | MTR_3g098810 | 46.212 | 132 | 62 | 2 | 18 | 145 | 14 | 140 | 1.82e-36 | 126 |
MS.gene006043.t1 | MTR_3g096140 | 46.400 | 125 | 63 | 2 | 34 | 155 | 2 | 125 | 3.64e-35 | 125 |
MS.gene006043.t1 | MTR_8g023840 | 47.015 | 134 | 66 | 4 | 18 | 148 | 11 | 142 | 3.25e-34 | 124 |
MS.gene006043.t1 | MTR_4g094302 | 43.846 | 130 | 60 | 3 | 18 | 145 | 11 | 129 | 1.85e-33 | 116 |
MS.gene006043.t1 | MTR_4g094302 | 43.846 | 130 | 60 | 3 | 18 | 145 | 11 | 129 | 7.24e-33 | 115 |
MS.gene006043.t1 | MTR_8g023860 | 45.588 | 136 | 69 | 4 | 18 | 150 | 12 | 145 | 2.68e-31 | 116 |
MS.gene006043.t1 | MTR_7g105170 | 43.182 | 132 | 71 | 3 | 18 | 145 | 4 | 135 | 3.09e-30 | 110 |
MS.gene006043.t1 | MTR_8g023900 | 40.845 | 142 | 78 | 5 | 6 | 144 | 1 | 139 | 6.10e-29 | 110 |
MS.gene006043.t1 | MTR_8g023900 | 42.568 | 148 | 75 | 5 | 11 | 150 | 181 | 326 | 4.83e-28 | 108 |
MS.gene006043.t1 | MTR_8g023930 | 43.846 | 130 | 68 | 4 | 18 | 144 | 24 | 151 | 1.92e-28 | 109 |
MS.gene006043.t1 | MTR_8g094580 | 59.722 | 72 | 28 | 1 | 74 | 145 | 6 | 76 | 2.79e-26 | 99.8 |
MS.gene006043.t1 | MTR_8g023880 | 38.667 | 150 | 71 | 6 | 12 | 144 | 1 | 146 | 3.61e-25 | 97.8 |
MS.gene006043.t1 | MTR_7g070140 | 50.000 | 84 | 40 | 2 | 72 | 153 | 15 | 98 | 5.89e-24 | 91.3 |
MS.gene006043.t1 | MTR_8g093790 | 37.121 | 132 | 64 | 5 | 18 | 149 | 10 | 122 | 5.11e-18 | 77.4 |
MS.gene006043.t1 | MTR_7g083330 | 30.469 | 128 | 84 | 4 | 18 | 144 | 18 | 141 | 4.04e-15 | 69.7 |
MS.gene006043.t1 | MTR_3g096400 | 29.771 | 131 | 79 | 5 | 18 | 145 | 7 | 127 | 2.50e-14 | 68.2 |
MS.gene006043.t1 | MTR_7g083360 | 28.289 | 152 | 101 | 5 | 13 | 160 | 5 | 152 | 4.20e-14 | 66.2 |
MS.gene006043.t1 | MTR_7g083370 | 27.068 | 133 | 92 | 4 | 13 | 144 | 5 | 133 | 1.18e-12 | 62.0 |
MS.gene006043.t1 | MTR_7g070150 | 52.830 | 53 | 23 | 2 | 111 | 162 | 1 | 52 | 6.20e-12 | 58.9 |
MS.gene006043.t1 | MTR_1g087190 | 53.333 | 45 | 20 | 1 | 20 | 63 | 7 | 51 | 2.59e-11 | 56.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene006043.t1 | AT1G71930 | 81.208 | 149 | 28 | 0 | 14 | 162 | 5 | 153 | 2.90e-90 | 266 |
MS.gene006043.t1 | AT1G71930 | 81.208 | 149 | 28 | 0 | 14 | 162 | 5 | 153 | 2.90e-90 | 266 |
MS.gene006043.t1 | AT2G18060 | 76.000 | 150 | 35 | 1 | 14 | 162 | 4 | 153 | 1.26e-85 | 256 |
MS.gene006043.t1 | AT2G18060 | 76.000 | 150 | 35 | 1 | 14 | 162 | 4 | 153 | 1.26e-85 | 256 |
MS.gene006043.t1 | AT4G36160 | 73.026 | 152 | 41 | 0 | 11 | 162 | 7 | 158 | 2.93e-84 | 253 |
MS.gene006043.t1 | AT4G36160 | 73.026 | 152 | 41 | 0 | 11 | 162 | 3 | 154 | 3.13e-84 | 253 |
MS.gene006043.t1 | AT4G36160 | 73.026 | 152 | 41 | 0 | 11 | 162 | 3 | 154 | 3.13e-84 | 253 |
MS.gene006043.t1 | AT5G66300 | 69.536 | 151 | 45 | 1 | 13 | 162 | 7 | 157 | 7.86e-79 | 236 |
MS.gene006043.t1 | AT1G12260 | 68.874 | 151 | 47 | 0 | 12 | 162 | 1 | 151 | 3.08e-78 | 236 |
MS.gene006043.t1 | AT1G12260 | 68.874 | 151 | 47 | 0 | 12 | 162 | 1 | 151 | 8.34e-78 | 237 |
MS.gene006043.t1 | AT1G62700 | 70.199 | 151 | 45 | 0 | 12 | 162 | 1 | 151 | 2.62e-77 | 235 |
MS.gene006043.t1 | AT1G62700 | 70.199 | 151 | 45 | 0 | 12 | 162 | 1 | 151 | 2.62e-77 | 235 |
MS.gene006043.t1 | AT2G46770 | 74.820 | 139 | 35 | 0 | 7 | 145 | 5 | 143 | 4.13e-75 | 229 |
MS.gene006043.t1 | AT5G62380 | 67.550 | 151 | 47 | 1 | 14 | 162 | 1 | 151 | 2.73e-73 | 224 |
MS.gene006043.t1 | AT5G62380 | 67.550 | 151 | 47 | 1 | 14 | 162 | 1 | 151 | 2.73e-73 | 224 |
MS.gene006043.t1 | AT1G32770 | 71.724 | 145 | 39 | 1 | 1 | 145 | 1 | 143 | 1.21e-72 | 222 |
MS.gene006043.t1 | AT3G61910 | 70.504 | 139 | 41 | 0 | 11 | 149 | 4 | 142 | 9.41e-71 | 217 |
MS.gene006043.t1 | AT1G33280 | 71.324 | 136 | 39 | 0 | 18 | 153 | 8 | 143 | 2.62e-70 | 214 |
MS.gene006043.t1 | AT4G10350 | 69.784 | 139 | 40 | 1 | 18 | 156 | 9 | 145 | 4.41e-69 | 213 |
MS.gene006043.t1 | AT1G79580 | 70.370 | 135 | 39 | 1 | 18 | 151 | 17 | 151 | 1.46e-66 | 207 |
MS.gene006043.t1 | AT1G79580 | 70.370 | 135 | 39 | 1 | 18 | 151 | 17 | 151 | 1.46e-66 | 207 |
MS.gene006043.t1 | AT1G79580 | 70.370 | 135 | 39 | 1 | 18 | 151 | 17 | 151 | 1.46e-66 | 207 |
MS.gene006043.t1 | AT1G79580 | 70.370 | 135 | 39 | 1 | 18 | 151 | 17 | 151 | 1.46e-66 | 207 |
MS.gene006043.t1 | AT1G79580 | 70.370 | 135 | 39 | 1 | 18 | 151 | 17 | 151 | 1.46e-66 | 207 |
MS.gene006043.t1 | AT3G17730 | 60.432 | 139 | 54 | 1 | 18 | 156 | 6 | 143 | 2.21e-59 | 185 |
MS.gene006043.t1 | AT3G03200 | 61.029 | 136 | 52 | 1 | 18 | 153 | 6 | 140 | 1.26e-56 | 184 |
MS.gene006043.t1 | AT5G46590 | 61.069 | 131 | 49 | 2 | 16 | 145 | 4 | 133 | 1.28e-55 | 176 |
MS.gene006043.t1 | AT5G46590 | 61.069 | 131 | 49 | 2 | 16 | 145 | 4 | 133 | 1.56e-55 | 176 |
MS.gene006043.t1 | AT1G65910 | 60.902 | 133 | 51 | 1 | 18 | 150 | 6 | 137 | 2.47e-55 | 184 |
MS.gene006043.t1 | AT3G18400 | 54.745 | 137 | 59 | 1 | 14 | 150 | 1 | 134 | 7.67e-55 | 176 |
MS.gene006043.t1 | AT5G17260 | 58.824 | 136 | 55 | 1 | 18 | 153 | 6 | 140 | 9.73e-55 | 179 |
MS.gene006043.t1 | AT4G17980 | 59.848 | 132 | 50 | 2 | 16 | 145 | 4 | 134 | 3.80e-54 | 172 |
MS.gene006043.t1 | AT4G17980 | 59.848 | 132 | 50 | 2 | 16 | 145 | 4 | 134 | 9.57e-54 | 172 |
MS.gene006043.t1 | AT1G54330 | 62.500 | 128 | 47 | 1 | 18 | 145 | 6 | 132 | 1.99e-53 | 171 |
MS.gene006043.t1 | AT5G07680 | 53.846 | 143 | 61 | 2 | 18 | 158 | 3 | 142 | 2.24e-52 | 169 |
MS.gene006043.t1 | AT5G07680 | 52.703 | 148 | 65 | 2 | 13 | 158 | 12 | 156 | 2.48e-52 | 169 |
MS.gene006043.t1 | AT1G56010 | 53.247 | 154 | 66 | 3 | 2 | 153 | 3 | 152 | 6.77e-52 | 168 |
MS.gene006043.t1 | AT3G29035 | 55.556 | 144 | 60 | 2 | 3 | 145 | 8 | 148 | 9.75e-52 | 167 |
MS.gene006043.t1 | AT5G39610 | 59.375 | 128 | 49 | 1 | 18 | 145 | 20 | 144 | 9.89e-52 | 167 |
MS.gene006043.t1 | AT3G15170 | 56.391 | 133 | 53 | 2 | 15 | 145 | 17 | 146 | 4.36e-51 | 166 |
MS.gene006043.t1 | AT1G69490 | 54.074 | 135 | 59 | 1 | 15 | 149 | 6 | 137 | 6.38e-51 | 164 |
MS.gene006043.t1 | AT5G61430 | 53.147 | 143 | 62 | 2 | 18 | 158 | 16 | 155 | 8.33e-51 | 166 |
MS.gene006043.t1 | AT2G24430 | 55.639 | 133 | 54 | 2 | 15 | 145 | 13 | 142 | 1.23e-50 | 165 |
MS.gene006043.t1 | AT2G24430 | 55.639 | 133 | 54 | 2 | 15 | 145 | 13 | 142 | 1.23e-50 | 165 |
MS.gene006043.t1 | AT3G12977 | 52.381 | 147 | 67 | 1 | 1 | 147 | 1 | 144 | 1.37e-50 | 164 |
MS.gene006043.t1 | AT5G53950 | 58.462 | 130 | 49 | 2 | 18 | 145 | 17 | 143 | 5.47e-50 | 165 |
MS.gene006043.t1 | AT3G04070 | 52.143 | 140 | 59 | 2 | 11 | 145 | 3 | 139 | 5.84e-50 | 164 |
MS.gene006043.t1 | AT3G04070 | 52.143 | 140 | 59 | 2 | 11 | 145 | 3 | 139 | 9.61e-50 | 164 |
MS.gene006043.t1 | AT1G76420 | 57.895 | 133 | 51 | 2 | 15 | 145 | 19 | 148 | 4.53e-49 | 161 |
MS.gene006043.t1 | AT4G27410 | 51.449 | 138 | 62 | 2 | 17 | 152 | 13 | 147 | 5.61e-49 | 160 |
MS.gene006043.t1 | AT5G63790 | 54.478 | 134 | 57 | 2 | 12 | 145 | 44 | 173 | 1.41e-48 | 159 |
MS.gene006043.t1 | AT5G63790 | 54.478 | 134 | 57 | 2 | 12 | 145 | 54 | 183 | 1.41e-48 | 159 |
MS.gene006043.t1 | AT1G61110 | 53.488 | 129 | 56 | 2 | 18 | 145 | 16 | 141 | 1.70e-48 | 159 |
MS.gene006043.t1 | AT3G10490 | 49.664 | 149 | 71 | 2 | 7 | 152 | 16 | 163 | 2.15e-48 | 157 |
MS.gene006043.t1 | AT3G10480 | 53.957 | 139 | 63 | 1 | 7 | 145 | 16 | 153 | 4.67e-48 | 161 |
MS.gene006043.t1 | AT3G10480 | 53.957 | 139 | 63 | 1 | 7 | 145 | 16 | 153 | 5.10e-48 | 161 |
MS.gene006043.t1 | AT5G18270 | 55.039 | 129 | 54 | 2 | 18 | 145 | 21 | 146 | 5.69e-48 | 158 |
MS.gene006043.t1 | AT5G08790 | 54.478 | 134 | 57 | 2 | 12 | 145 | 1 | 130 | 8.27e-48 | 156 |
MS.gene006043.t1 | AT1G77450 | 55.906 | 127 | 52 | 2 | 19 | 145 | 11 | 133 | 1.18e-47 | 155 |
MS.gene006043.t1 | AT5G18270 | 54.264 | 129 | 55 | 2 | 18 | 145 | 21 | 146 | 1.18e-47 | 157 |
MS.gene006043.t1 | AT2G33480 | 51.493 | 134 | 59 | 1 | 18 | 151 | 15 | 142 | 1.24e-47 | 155 |
MS.gene006043.t1 | AT2G33480 | 51.493 | 134 | 59 | 1 | 18 | 151 | 15 | 142 | 1.41e-47 | 155 |
MS.gene006043.t1 | AT3G04060 | 51.389 | 144 | 64 | 3 | 18 | 158 | 20 | 160 | 1.95e-47 | 157 |
MS.gene006043.t1 | AT5G04410 | 54.615 | 130 | 58 | 1 | 16 | 145 | 7 | 135 | 2.33e-47 | 162 |
MS.gene006043.t1 | AT1G32510 | 51.825 | 137 | 58 | 2 | 16 | 145 | 4 | 139 | 3.09e-47 | 155 |
MS.gene006043.t1 | AT1G33060 | 51.316 | 152 | 69 | 3 | 7 | 155 | 14 | 163 | 1.03e-46 | 161 |
MS.gene006043.t1 | AT1G33060 | 51.316 | 152 | 69 | 3 | 7 | 155 | 14 | 163 | 1.08e-46 | 161 |
MS.gene006043.t1 | AT3G10500 | 53.846 | 130 | 59 | 1 | 16 | 145 | 7 | 135 | 1.13e-46 | 159 |
MS.gene006043.t1 | AT3G10490 | 49.664 | 149 | 71 | 2 | 7 | 152 | 16 | 163 | 1.16e-46 | 158 |
MS.gene006043.t1 | AT3G15500 | 51.938 | 129 | 59 | 1 | 17 | 145 | 13 | 138 | 1.49e-46 | 154 |
MS.gene006043.t1 | AT1G01720 | 53.906 | 128 | 55 | 2 | 18 | 145 | 7 | 130 | 1.71e-46 | 153 |
MS.gene006043.t1 | AT2G27300 | 49.286 | 140 | 65 | 2 | 16 | 155 | 12 | 145 | 3.55e-46 | 154 |
MS.gene006043.t1 | AT1G52890 | 51.163 | 129 | 60 | 1 | 17 | 145 | 13 | 138 | 4.45e-46 | 153 |
MS.gene006043.t1 | AT4G35580 | 54.074 | 135 | 60 | 2 | 11 | 145 | 3 | 135 | 6.10e-46 | 157 |
MS.gene006043.t1 | AT4G35580 | 54.074 | 135 | 60 | 2 | 11 | 145 | 3 | 135 | 8.03e-46 | 157 |
MS.gene006043.t1 | AT4G35580 | 54.074 | 135 | 60 | 2 | 11 | 145 | 3 | 135 | 9.55e-46 | 157 |
MS.gene006043.t1 | AT4G27410 | 48.344 | 151 | 62 | 4 | 18 | 152 | 14 | 164 | 2.96e-45 | 151 |
MS.gene006043.t1 | AT4G28530 | 51.316 | 152 | 51 | 4 | 13 | 145 | 5 | 152 | 5.40e-45 | 151 |
MS.gene006043.t1 | AT1G26870 | 50.746 | 134 | 61 | 2 | 14 | 145 | 12 | 142 | 7.99e-45 | 152 |
MS.gene006043.t1 | AT3G15510 | 53.968 | 126 | 53 | 2 | 22 | 145 | 21 | 143 | 8.17e-45 | 151 |
MS.gene006043.t1 | AT5G39820 | 51.128 | 133 | 60 | 2 | 15 | 145 | 17 | 146 | 1.63e-44 | 149 |
MS.gene006043.t1 | AT5G24590 | 55.072 | 138 | 56 | 3 | 13 | 145 | 4 | 140 | 1.79e-44 | 152 |
MS.gene006043.t1 | AT5G13180 | 53.077 | 130 | 53 | 2 | 18 | 145 | 14 | 137 | 2.39e-44 | 147 |
MS.gene006043.t1 | AT5G22290 | 46.429 | 140 | 72 | 2 | 6 | 144 | 8 | 145 | 6.46e-44 | 148 |
MS.gene006043.t1 | AT1G34180 | 46.575 | 146 | 77 | 1 | 7 | 152 | 5 | 149 | 9.21e-44 | 150 |
MS.gene006043.t1 | AT3G10480 | 43.275 | 171 | 65 | 1 | 7 | 145 | 16 | 186 | 2.49e-43 | 150 |
MS.gene006043.t1 | AT1G34180 | 46.575 | 146 | 77 | 1 | 7 | 152 | 5 | 149 | 2.93e-43 | 150 |
MS.gene006043.t1 | AT3G49530 | 51.049 | 143 | 65 | 3 | 4 | 145 | 2 | 140 | 3.53e-43 | 148 |
MS.gene006043.t1 | AT4G10350 | 70.213 | 94 | 26 | 1 | 63 | 156 | 7 | 98 | 4.33e-43 | 145 |
MS.gene006043.t1 | AT2G43000 | 51.587 | 126 | 58 | 1 | 20 | 145 | 20 | 142 | 7.04e-43 | 144 |
MS.gene006043.t1 | AT3G49530 | 51.049 | 143 | 65 | 3 | 4 | 145 | 2 | 140 | 7.62e-43 | 148 |
MS.gene006043.t1 | AT3G44290 | 48.000 | 125 | 63 | 1 | 20 | 144 | 16 | 138 | 8.30e-43 | 142 |
MS.gene006043.t1 | AT1G34180 | 45.000 | 160 | 71 | 3 | 7 | 152 | 5 | 161 | 1.49e-42 | 147 |
MS.gene006043.t1 | AT2G02450 | 47.482 | 139 | 66 | 3 | 17 | 151 | 50 | 185 | 2.68e-42 | 145 |
MS.gene006043.t1 | AT1G34190 | 49.630 | 135 | 63 | 2 | 20 | 152 | 18 | 149 | 3.36e-42 | 147 |
MS.gene006043.t1 | AT1G34180 | 47.619 | 147 | 60 | 3 | 20 | 152 | 18 | 161 | 4.33e-42 | 147 |
MS.gene006043.t1 | AT2G02450 | 47.482 | 139 | 66 | 3 | 17 | 151 | 50 | 185 | 4.69e-42 | 145 |
MS.gene006043.t1 | AT3G44290 | 48.000 | 125 | 63 | 1 | 20 | 144 | 16 | 138 | 1.32e-41 | 142 |
MS.gene006043.t1 | AT5G64060 | 50.000 | 126 | 62 | 1 | 20 | 145 | 8 | 132 | 2.88e-41 | 142 |
MS.gene006043.t1 | AT1G52880 | 52.344 | 128 | 54 | 2 | 22 | 145 | 21 | 145 | 7.07e-41 | 140 |
MS.gene006043.t1 | AT5G04395 | 45.098 | 153 | 71 | 3 | 15 | 154 | 25 | 177 | 3.17e-40 | 134 |
MS.gene006043.t1 | AT2G17040 | 46.512 | 129 | 63 | 2 | 20 | 145 | 8 | 133 | 2.69e-39 | 134 |
MS.gene006043.t1 | AT5G09330 | 50.000 | 126 | 62 | 1 | 20 | 145 | 8 | 132 | 3.30e-39 | 139 |
MS.gene006043.t1 | AT5G09330 | 50.000 | 126 | 62 | 1 | 20 | 145 | 8 | 132 | 3.30e-39 | 139 |
MS.gene006043.t1 | AT5G09330 | 50.000 | 126 | 62 | 1 | 20 | 145 | 8 | 132 | 3.30e-39 | 139 |
MS.gene006043.t1 | AT5G09330 | 50.000 | 126 | 62 | 1 | 20 | 145 | 8 | 132 | 3.30e-39 | 139 |
MS.gene006043.t1 | AT5G09330 | 50.000 | 126 | 62 | 1 | 20 | 145 | 8 | 132 | 3.30e-39 | 139 |
MS.gene006043.t1 | AT3G12910 | 46.667 | 150 | 69 | 5 | 11 | 154 | 14 | 158 | 2.83e-38 | 132 |
MS.gene006043.t1 | AT1G56010 | 65.385 | 78 | 27 | 0 | 76 | 153 | 8 | 85 | 3.48e-35 | 123 |
MS.gene006043.t1 | AT1G32870 | 48.120 | 133 | 66 | 2 | 18 | 150 | 10 | 139 | 4.22e-35 | 128 |
MS.gene006043.t1 | AT1G32870 | 48.120 | 133 | 66 | 2 | 18 | 150 | 10 | 139 | 4.38e-35 | 128 |
MS.gene006043.t1 | AT1G32870 | 48.120 | 133 | 66 | 2 | 18 | 150 | 46 | 175 | 5.10e-35 | 128 |
MS.gene006043.t1 | AT3G12977 | 68.056 | 72 | 23 | 0 | 76 | 147 | 20 | 91 | 4.68e-33 | 117 |
MS.gene006043.t1 | AT5G61430 | 57.471 | 87 | 35 | 1 | 74 | 158 | 6 | 92 | 1.71e-31 | 114 |
MS.gene006043.t1 | AT5G22380 | 43.478 | 138 | 68 | 4 | 14 | 144 | 1 | 135 | 1.30e-29 | 108 |
MS.gene006043.t1 | AT3G44350 | 41.221 | 131 | 68 | 4 | 21 | 145 | 8 | 135 | 9.31e-29 | 104 |
MS.gene006043.t1 | AT4G28530 | 48.276 | 116 | 39 | 3 | 13 | 111 | 5 | 116 | 2.09e-28 | 107 |
MS.gene006043.t1 | AT3G44350 | 41.221 | 131 | 68 | 4 | 21 | 145 | 8 | 135 | 2.37e-28 | 105 |
MS.gene006043.t1 | AT2G33480 | 53.846 | 78 | 36 | 0 | 74 | 151 | 8 | 85 | 9.41e-28 | 103 |
MS.gene006043.t1 | AT2G18060 | 70.312 | 64 | 19 | 0 | 99 | 162 | 2 | 65 | 1.28e-27 | 104 |
MS.gene006043.t1 | AT5G64530 | 39.535 | 129 | 61 | 5 | 18 | 144 | 3 | 116 | 2.95e-25 | 95.5 |
MS.gene006043.t1 | AT5G64530 | 39.535 | 129 | 61 | 5 | 18 | 144 | 3 | 116 | 1.08e-24 | 94.7 |
MS.gene006043.t1 | AT1G02230 | 44.526 | 137 | 64 | 8 | 19 | 149 | 4 | 134 | 4.32e-24 | 96.7 |
MS.gene006043.t1 | AT4G01520 | 38.346 | 133 | 72 | 5 | 19 | 144 | 5 | 134 | 2.26e-23 | 94.0 |
MS.gene006043.t1 | AT3G04420 | 39.695 | 131 | 70 | 4 | 19 | 144 | 4 | 130 | 1.68e-22 | 91.3 |
MS.gene006043.t1 | AT3G04420 | 39.695 | 131 | 70 | 4 | 19 | 144 | 4 | 130 | 2.24e-22 | 91.7 |
MS.gene006043.t1 | AT4G01540 | 37.692 | 130 | 73 | 4 | 21 | 144 | 7 | 134 | 2.91e-22 | 92.4 |
MS.gene006043.t1 | AT4G01540 | 37.405 | 131 | 74 | 4 | 21 | 145 | 7 | 135 | 3.12e-22 | 92.0 |
MS.gene006043.t1 | AT4G01540 | 37.692 | 130 | 73 | 4 | 21 | 144 | 7 | 134 | 3.42e-22 | 92.0 |
MS.gene006043.t1 | AT4G01540 | 37.405 | 131 | 74 | 4 | 21 | 145 | 7 | 135 | 3.99e-22 | 91.7 |
MS.gene006043.t1 | AT1G02250 | 40.152 | 132 | 68 | 5 | 19 | 144 | 4 | 130 | 8.55e-22 | 90.5 |
MS.gene006043.t1 | AT4G01550 | 40.310 | 129 | 70 | 5 | 21 | 144 | 7 | 133 | 1.12e-21 | 90.9 |
MS.gene006043.t1 | AT1G02220 | 37.879 | 132 | 70 | 5 | 18 | 144 | 3 | 127 | 3.16e-19 | 83.6 |
MS.gene006043.t1 | AT1G01010 | 36.496 | 137 | 72 | 6 | 21 | 146 | 6 | 138 | 6.05e-19 | 83.2 |
MS.gene006043.t1 | AT5G50820 | 34.559 | 136 | 74 | 5 | 18 | 149 | 17 | 141 | 4.54e-18 | 77.8 |
MS.gene006043.t1 | AT3G10490 | 57.692 | 52 | 22 | 0 | 94 | 145 | 2 | 53 | 8.34e-17 | 76.6 |
MS.gene006043.t1 | AT3G10490 | 57.692 | 52 | 22 | 0 | 94 | 145 | 2 | 53 | 8.34e-17 | 76.6 |
MS.gene006043.t1 | AT3G56530 | 29.412 | 136 | 92 | 2 | 17 | 150 | 51 | 184 | 1.87e-16 | 75.5 |
MS.gene006043.t1 | AT2G43000 | 52.381 | 63 | 30 | 0 | 83 | 145 | 2 | 64 | 2.35e-16 | 73.2 |
MS.gene006043.t1 | AT5G14000 | 30.233 | 129 | 83 | 2 | 18 | 144 | 15 | 138 | 7.08e-16 | 70.9 |
MS.gene006043.t1 | AT5G14000 | 30.233 | 129 | 83 | 2 | 18 | 144 | 15 | 138 | 2.35e-15 | 70.9 |
MS.gene006043.t1 | AT5G22290 | 60.000 | 45 | 18 | 0 | 100 | 144 | 2 | 46 | 2.41e-14 | 68.6 |
MS.gene006043.t1 | AT3G55210 | 26.531 | 147 | 93 | 4 | 18 | 151 | 11 | 155 | 2.84e-13 | 66.2 |
MS.gene006043.t1 | AT3G04430 | 34.815 | 135 | 71 | 6 | 24 | 145 | 6 | 136 | 6.91e-13 | 63.9 |
Find 37 sgRNAs with CRISPR-Local
Find 118 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GAGCCACTGCTGCTGGATTT+TGG | 0.210425 | 1.3:+67096103 | MS.gene006043:CDS |
TAGGATATTTCTTATCTTTG+TGG | 0.324009 | 1.3:-67096062 | None:intergenic |
GAGATCATCATCAATGGATA+TGG | 0.360587 | 1.3:+67095677 | MS.gene006043:intron |
CTATTAGTTCTTGTTCCTGT+AGG | 0.412771 | 1.3:-67096081 | None:intergenic |
TTGTAGGGTATTACCTCAAC+AGG | 0.423700 | 1.3:+67095748 | MS.gene006043:CDS |
ACTAATAGAGCCACTGCTGC+TGG | 0.441800 | 1.3:+67096096 | MS.gene006043:CDS |
AAGAAGGATGGGTTGTGTGC+AGG | 0.445621 | 1.3:+67096839 | MS.gene006043:CDS |
CCAACAGAAGAAGAACTTGT+AGG | 0.454094 | 1.3:+67095732 | MS.gene006043:CDS |
CCTACAAGTTCTTCTTCTGT+TGG | 0.464154 | 1.3:-67095732 | None:intergenic |
GTGAATTAATCTTCCTGTTG+AGG | 0.483860 | 1.3:-67095761 | None:intergenic |
TATTAATTACTGCAGGAAGA+AGG | 0.489259 | 1.3:+67096823 | MS.gene006043:intron |
CAAATGGAAGGAAAACTGAT+TGG | 0.489271 | 1.3:+67096214 | MS.gene006043:CDS |
TACAAGGGACGTGCCCCAAA+TGG | 0.490347 | 1.3:+67096198 | MS.gene006043:CDS |
AGAAGGATGGGTTGTGTGCA+GGG | 0.492807 | 1.3:+67096840 | MS.gene006043:CDS |
ATGGAATCATGTGTACCTCC+AGG | 0.502938 | 1.3:+67095696 | MS.gene006043:CDS |
ATTGAACCATGGGACATTCA+AGG | 0.504836 | 1.3:+67095828 | MS.gene006043:CDS |
AATGCAGATAGATGCAAGCT+AGG | 0.521793 | 1.3:+67096006 | MS.gene006043:intron |
CAACAGAAGAAGAACTTGTA+GGG | 0.533130 | 1.3:+67095733 | MS.gene006043:CDS |
AATTACTGCAGGAAGAAGGA+TGG | 0.543175 | 1.3:+67096827 | MS.gene006043:intron |
TCAGGAGAGATCATCATCAA+TGG | 0.553807 | 1.3:+67095671 | MS.gene006043:intron |
AAAGATAAGAAATATCCTAC+AGG | 0.562663 | 1.3:+67096066 | MS.gene006043:CDS |
ATTACTGCAGGAAGAAGGAT+GGG | 0.564101 | 1.3:+67096828 | MS.gene006043:intron |
CTAAAATAACTTGCCTGTGG+AGG | 0.564331 | 1.3:-67096276 | None:intergenic |
TTCTGAACATGGTCCTCCAC+AGG | 0.565416 | 1.3:+67096263 | MS.gene006043:CDS |
AAAACAGAATAATAGGAATG+AGG | 0.568492 | 1.3:+67096160 | MS.gene006043:CDS |
ATCTCTACAAAATTGAACCA+TGG | 0.574175 | 1.3:+67095817 | MS.gene006043:CDS |
TCTCTACAAAATTGAACCAT+GGG | 0.577975 | 1.3:+67095818 | MS.gene006043:CDS |
TGATCTAGATGTTATTGTTG+AGG | 0.597687 | 1.3:+67095791 | MS.gene006043:CDS |
AGGGACGTGCCCCAAATGGA+AGG | 0.600104 | 1.3:+67096202 | MS.gene006043:CDS |
TTTCCAAAATCCAGCAGCAG+TGG | 0.602768 | 1.3:-67096106 | None:intergenic |
GTTGGATGAAATCTAAACCC+TGG | 0.604289 | 1.3:-67095714 | None:intergenic |
AATGTACCTTGAATGTCCCA+TGG | 0.604436 | 1.3:-67095834 | None:intergenic |
TGGAATCATGTGTACCTCCA+GGG | 0.620854 | 1.3:+67095697 | MS.gene006043:CDS |
GATATGAGCAACAGAATGAG+TGG | 0.640331 | 1.3:+67096028 | MS.gene006043:CDS |
ATGCTAAAATAACTTGCCTG+TGG | 0.642241 | 1.3:-67096279 | None:intergenic |
AGACATCAAACTTCTGAACA+TGG | 0.653088 | 1.3:+67096252 | MS.gene006043:CDS |
GGATGAAATCTAAACCCTGG+AGG | 0.694839 | 1.3:-67095711 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAATAAAATTAGAATAGAA+AGG | - | chr1.3:67096387-67096406 | None:intergenic | 10.0% |
!! | AAAATGATTTATTTATCAAA+TGG | - | chr1.3:67094634-67094653 | None:intergenic | 10.0% |
!!! | ATTTGATAAATAAATCATTT+TGG | + | chr1.3:67094633-67094652 | MS.gene006043:intron | 10.0% |
!!! | TTTATTTTATCTTTTGTTAT+AGG | + | chr1.3:67096670-67096689 | MS.gene006043:intron | 10.0% |
!! | AAATGATTCATTATTTATGT+AGG | - | chr1.3:67095638-67095657 | None:intergenic | 15.0% |
!! | AAGGATATATATACTATATA+TGG | - | chr1.3:67094507-67094526 | None:intergenic | 15.0% |
!! | CTTGTTCTATATATTATTAA+TGG | + | chr1.3:67095329-67095348 | MS.gene006043:intron | 15.0% |
!! | TTCTATATATTATTAATGGT+GGG | + | chr1.3:67095333-67095352 | MS.gene006043:intron | 15.0% |
!! | TTGAGATAATAATATAATTG+AGG | - | chr1.3:67096755-67096774 | None:intergenic | 15.0% |
!!! | ATAAAAAACAACTTTTCTTA+GGG | + | chr1.3:67095259-67095278 | MS.gene006043:intron | 15.0% |
!!! | CTTAGTTTTCTAAATAAAAA+TGG | + | chr1.3:67094773-67094792 | MS.gene006043:intron | 15.0% |
!!! | TAAGAAAAGTTGTTTTTTAT+GGG | - | chr1.3:67095259-67095278 | None:intergenic | 15.0% |
!!! | TAATTTACATGTTTCTTTTT+TGG | - | chr1.3:67095585-67095604 | None:intergenic | 15.0% |
!! | AACTAACAAACAAGATATAT+AGG | - | chr1.3:67095304-67095323 | None:intergenic | 20.0% |
!! | GTTCTATATATTATTAATGG+TGG | + | chr1.3:67095332-67095351 | MS.gene006043:intron | 20.0% |
!! | TATTACTGAAATCAGTATTA+TGG | + | chr1.3:67094924-67094943 | MS.gene006043:intron | 20.0% |
!! | TATTTACTATTTACAGTCAA+AGG | - | chr1.3:67096794-67096813 | None:intergenic | 20.0% |
!! | TTAGAAAACCAAAACATATA+TGG | + | chr1.3:67095602-67095621 | MS.gene006043:intron | 20.0% |
!! | TTGAAATTATTAATTACTGC+AGG | + | chr1.3:67096816-67096835 | MS.gene006043:intron | 20.0% |
!!! | ATGTTTTGGTTTTTATCATT+TGG | + | chr1.3:67094808-67094827 | MS.gene006043:intron | 20.0% |
!!! | CAATTTTACCATATATGTTT+TGG | - | chr1.3:67095613-67095632 | None:intergenic | 20.0% |
!!! | CATAAAAAACAACTTTTCTT+AGG | + | chr1.3:67095258-67095277 | MS.gene006043:intron | 20.0% |
!!! | CTAAGAAAAGTTGTTTTTTA+TGG | - | chr1.3:67095260-67095279 | None:intergenic | 20.0% |
!!! | GATAAATAAATCATTTTGGT+TGG | + | chr1.3:67094637-67094656 | MS.gene006043:intron | 20.0% |
!!! | TAATATAATTGAGGTTTGTT+TGG | - | chr1.3:67096746-67096765 | None:intergenic | 20.0% |
!!! | TCATAATCAAAATTTGACTT+TGG | + | chr1.3:67095891-67095910 | MS.gene006043:intron | 20.0% |
! | AAAACAGAATAATAGGAATG+AGG | + | chr1.3:67096160-67096179 | MS.gene006043:CDS | 25.0% |
! | AAAGATAAGAAATATCCTAC+AGG | + | chr1.3:67096066-67096085 | MS.gene006043:CDS | 25.0% |
! | AACCAAAAAACTAATAGACA+TGG | - | chr1.3:67094707-67094726 | None:intergenic | 25.0% |
! | ACTTCCAAAAACAGAATAAT+AGG | + | chr1.3:67096153-67096172 | MS.gene006043:CDS | 25.0% |
! | AGTAAATTGAACAGAAAAGT+TGG | - | chr1.3:67095205-67095224 | None:intergenic | 25.0% |
! | ATAATAGTTACACAACACTA+AGG | - | chr1.3:67094526-67094545 | None:intergenic | 25.0% |
! | CATCATCATCATCATTATTA+TGG | + | chr1.3:67095431-67095450 | MS.gene006043:intron | 25.0% |
! | TAAATAAAAATGGAGTCTGA+TGG | + | chr1.3:67094783-67094802 | MS.gene006043:intron | 25.0% |
! | TAGGATATTTCTTATCTTTG+TGG | - | chr1.3:67096065-67096084 | None:intergenic | 25.0% |
! | TTATATCCTTATCAACCTTA+TGG | + | chr1.3:67095919-67095938 | MS.gene006043:intron | 25.0% |
!! | CATTCCTATTATTCTGTTTT+TGG | - | chr1.3:67096160-67096179 | None:intergenic | 25.0% |
!!! | ATCCATGTCTATTAGTTTTT+TGG | + | chr1.3:67094702-67094721 | MS.gene006043:intron | 25.0% |
!!! | CATTTTGTTTTGTTTCTTTC+AGG | + | chr1.3:67095653-67095672 | MS.gene006043:intron | 25.0% |
!!! | TGCAAATGCAACTTTAATTT+TGG | - | chr1.3:67095413-67095432 | None:intergenic | 25.0% |
!!! | TGTAATTTTTTAGAACTACG+AGG | + | chr1.3:67095481-67095500 | MS.gene006043:intron | 25.0% |
AAAAATTACACTAGCTAGCT+AGG | - | chr1.3:67095471-67095490 | None:intergenic | 30.0% | |
AAAATTACACTAGCTAGCTA+GGG | - | chr1.3:67095470-67095489 | None:intergenic | 30.0% | |
ACACAACACATAACATAGTA+TGG | - | chr1.3:67095065-67095084 | None:intergenic | 30.0% | |
ACTGAAATCAGTATTATGGA+TGG | + | chr1.3:67094928-67094947 | MS.gene006043:intron | 30.0% | |
ATCTCTACAAAATTGAACCA+TGG | + | chr1.3:67095817-67095836 | MS.gene006043:CDS | 30.0% | |
GTAGTGATAATTTATGTCCT+TGG | + | chr1.3:67094986-67095005 | MS.gene006043:intron | 30.0% | |
TACTTGTGCATGTTTGAAAA+TGG | - | chr1.3:67096541-67096560 | None:intergenic | 30.0% | |
TATTAATTACTGCAGGAAGA+AGG | + | chr1.3:67096823-67096842 | MS.gene006043:intron | 30.0% | |
TCTCTACAAAATTGAACCAT+GGG | + | chr1.3:67095818-67095837 | MS.gene006043:CDS | 30.0% | |
TGATCTAGATGTTATTGTTG+AGG | + | chr1.3:67095791-67095810 | MS.gene006043:CDS | 30.0% | |
TTAGTGTGAAAACAACCTTA+TGG | + | chr1.3:67095013-67095032 | MS.gene006043:intron | 30.0% | |
! | AAGACACTTGTCTTTTACAA+GGG | + | chr1.3:67096183-67096202 | MS.gene006043:CDS | 30.0% |
! | AATCAGTTTTCCTTCCATTT+GGG | - | chr1.3:67096215-67096234 | None:intergenic | 30.0% |
! | GTTTTCACACTAATTTTCCA+AGG | - | chr1.3:67095006-67095025 | None:intergenic | 30.0% |
!!! | GTATTTTTTTTCCACTGTTG+AGG | - | chr1.3:67094849-67094868 | None:intergenic | 30.0% |
AACAACCTTATGGTTATGAG+TGG | + | chr1.3:67095023-67095042 | MS.gene006043:intron | 35.0% | |
AAGTTCCACTCATAACCATA+AGG | - | chr1.3:67095031-67095050 | None:intergenic | 35.0% | |
AGACATCAAACTTCTGAACA+TGG | + | chr1.3:67096252-67096271 | MS.gene006043:CDS | 35.0% | |
AGCATGTGCAATTCCAAAAT+TGG | - | chr1.3:67095375-67095394 | None:intergenic | 35.0% | |
ATGCTGCCTTAATTACCATT+AGG | + | chr1.3:67095553-67095572 | MS.gene006043:intron | 35.0% | |
CAAATGGAAGGAAAACTGAT+TGG | + | chr1.3:67096214-67096233 | MS.gene006043:CDS | 35.0% | |
CAACAGAAGAAGAACTTGTA+GGG | + | chr1.3:67095733-67095752 | MS.gene006043:CDS | 35.0% | |
GAGATCATCATCAATGGATA+TGG | + | chr1.3:67095677-67095696 | MS.gene006043:intron | 35.0% | |
GTGAATTAATCTTCCTGTTG+AGG | - | chr1.3:67095764-67095783 | None:intergenic | 35.0% | |
TTCTCAGATGAGTCTGTTAA+AGG | + | chr1.3:67094571-67094590 | MS.gene006043:intron | 35.0% | |
TTGTGCATGTTTGAAAATGG+AGG | - | chr1.3:67096538-67096557 | None:intergenic | 35.0% | |
! | ATCAGTTTTCCTTCCATTTG+GGG | - | chr1.3:67096214-67096233 | None:intergenic | 35.0% |
! | ATGCTAAAATAACTTGCCTG+TGG | - | chr1.3:67096282-67096301 | None:intergenic | 35.0% |
! | CAATCAGTTTTCCTTCCATT+TGG | - | chr1.3:67096216-67096235 | None:intergenic | 35.0% |
! | CTATTAGTTCTTGTTCCTGT+AGG | - | chr1.3:67096084-67096103 | None:intergenic | 35.0% |
! | GAAGACACTTGTCTTTTACA+AGG | + | chr1.3:67096182-67096201 | MS.gene006043:CDS | 35.0% |
! | GACAGCAAAGTCAATCTTTT+CGG | + | chr1.3:67095179-67095198 | MS.gene006043:intron | 35.0% |
!! | ATTTTGGAAAGCTACTGGAA+GGG | + | chr1.3:67096119-67096138 | MS.gene006043:CDS | 35.0% |
!!! | ACATGTTTCTTTTTTGGCCA+AGG | - | chr1.3:67095579-67095598 | None:intergenic | 35.0% |
AATGCAGATAGATGCAAGCT+AGG | + | chr1.3:67096006-67096025 | MS.gene006043:intron | 40.0% | |
AATGTACCTTGAATGTCCCA+TGG | - | chr1.3:67095837-67095856 | None:intergenic | 40.0% | |
AATTACTGCAGGAAGAAGGA+TGG | + | chr1.3:67096827-67096846 | MS.gene006043:intron | 40.0% | |
ACATGACATCATGCTCCATA+AGG | - | chr1.3:67095937-67095956 | None:intergenic | 40.0% | |
ATTACTGCAGGAAGAAGGAT+GGG | + | chr1.3:67096828-67096847 | MS.gene006043:intron | 40.0% | |
ATTGAACCATGGGACATTCA+AGG | + | chr1.3:67095828-67095847 | MS.gene006043:CDS | 40.0% | |
CACTCTCTCAACACTTAAGT+TGG | - | chr1.3:67095128-67095147 | None:intergenic | 40.0% | |
CCAACAGAAGAAGAACTTGT+AGG | + | chr1.3:67095732-67095751 | MS.gene006043:CDS | 40.0% | |
CCAAGGCCTAATGGTAATTA+AGG | - | chr1.3:67095562-67095581 | None:intergenic | 40.0% | |
CCTACAAGTTCTTCTTCTGT+TGG | - | chr1.3:67095735-67095754 | None:intergenic | 40.0% | |
CCTTAATTACCATTAGGCCT+TGG | + | chr1.3:67095559-67095578 | MS.gene006043:intron | 40.0% | |
GATATGAGCAACAGAATGAG+TGG | + | chr1.3:67096028-67096047 | MS.gene006043:CDS | 40.0% | |
GTTGGATGAAATCTAAACCC+TGG | - | chr1.3:67095717-67095736 | None:intergenic | 40.0% | |
TATCATGATCTCCTCAACAG+TGG | + | chr1.3:67094835-67094854 | MS.gene006043:intron | 40.0% | |
TCAGGAGAGATCATCATCAA+TGG | + | chr1.3:67095671-67095690 | MS.gene006043:intron | 40.0% | |
! | AACGATTGTTTTCCACAGGA+AGG | + | chr1.3:67095089-67095108 | MS.gene006043:intron | 40.0% |
! | CTAAAATAACTTGCCTGTGG+AGG | - | chr1.3:67096279-67096298 | None:intergenic | 40.0% |
! | GATCAACGATTGTTTTCCAC+AGG | + | chr1.3:67095085-67095104 | MS.gene006043:intron | 40.0% |
! | GGAGTCTGATGGAAATGTTT+TGG | + | chr1.3:67094794-67094813 | MS.gene006043:intron | 40.0% |
! | TTGTAGGGTATTACCTCAAC+AGG | + | chr1.3:67095748-67095767 | MS.gene006043:CDS | 40.0% |
!! | CATGCTCCATAAGGTTGATA+AGG | - | chr1.3:67095928-67095947 | None:intergenic | 40.0% |
!! | GATTTTGGAAAGCTACTGGA+AGG | + | chr1.3:67096118-67096137 | MS.gene006043:CDS | 40.0% |
!! | TCTCTCAACACTTAAGTTGG+TGG | - | chr1.3:67095125-67095144 | None:intergenic | 40.0% |
ATGGAATCATGTGTACCTCC+AGG | + | chr1.3:67095696-67095715 | MS.gene006043:CDS | 45.0% | |
CAAAATTGGCAGACCATGTG+TGG | - | chr1.3:67095361-67095380 | None:intergenic | 45.0% | |
GCACATGCTGCACAATTGTT+GGG | + | chr1.3:67095386-67095405 | MS.gene006043:intron | 45.0% | |
GGATGAAATCTAAACCCTGG+AGG | - | chr1.3:67095714-67095733 | None:intergenic | 45.0% | |
TGCACATGCTGCACAATTGT+TGG | + | chr1.3:67095385-67095404 | MS.gene006043:intron | 45.0% | |
TGGAATCATGTGTACCTCCA+GGG | + | chr1.3:67095697-67095716 | MS.gene006043:CDS | 45.0% | |
TTTCCAAAATCCAGCAGCAG+TGG | - | chr1.3:67096109-67096128 | None:intergenic | 45.0% | |
! | CACACATGGTCTGCCAATTT+TGG | + | chr1.3:67095359-67095378 | MS.gene006043:intron | 45.0% |
! | TTAATGGTGGGATCCACACA+TGG | + | chr1.3:67095345-67095364 | MS.gene006043:intron | 45.0% |
!! | CTCAACACTTAAGTTGGTGG+TGG | - | chr1.3:67095122-67095141 | None:intergenic | 45.0% |
!! | GCTGGATTTTGGAAAGCTAC+TGG | + | chr1.3:67096114-67096133 | MS.gene006043:CDS | 45.0% |
!!! | CTTTTTTGGCCAAGGCCTAA+TGG | - | chr1.3:67095571-67095590 | None:intergenic | 45.0% |
ACTAATAGAGCCACTGCTGC+TGG | + | chr1.3:67096096-67096115 | MS.gene006043:CDS | 50.0% | |
TTCTGAACATGGTCCTCCAC+AGG | + | chr1.3:67096263-67096282 | MS.gene006043:CDS | 50.0% | |
!! | AAGAAGGATGGGTTGTGTGC+AGG | + | chr1.3:67096839-67096858 | MS.gene006043:CDS | 50.0% |
!! | AGAAGGATGGGTTGTGTGCA+GGG | + | chr1.3:67096840-67096859 | MS.gene006043:CDS | 50.0% |
GGTGGAGAAAGACCTTCCTG+TGG | - | chr1.3:67095104-67095123 | None:intergenic | 55.0% | |
TACAAGGGACGTGCCCCAAA+TGG | + | chr1.3:67096198-67096217 | MS.gene006043:CDS | 55.0% | |
! | GAGCCACTGCTGCTGGATTT+TGG | + | chr1.3:67096103-67096122 | MS.gene006043:CDS | 55.0% |
AGGGACGTGCCCCAAATGGA+AGG | + | chr1.3:67096202-67096221 | MS.gene006043:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.3 | gene | 67094448 | 67096869 | 67094448 | ID=MS.gene006043 |
chr1.3 | mRNA | 67094448 | 67096869 | 67094448 | ID=MS.gene006043.t1;Parent=MS.gene006043 |
chr1.3 | exon | 67094448 | 67094468 | 67094448 | ID=MS.gene006043.t1.exon1;Parent=MS.gene006043.t1 |
chr1.3 | CDS | 67094448 | 67094468 | 67094448 | ID=cds.MS.gene006043.t1;Parent=MS.gene006043.t1 |
chr1.3 | exon | 67095678 | 67095849 | 67095678 | ID=MS.gene006043.t1.exon2;Parent=MS.gene006043.t1 |
chr1.3 | CDS | 67095678 | 67095849 | 67095678 | ID=cds.MS.gene006043.t1;Parent=MS.gene006043.t1 |
chr1.3 | exon | 67096013 | 67096288 | 67096013 | ID=MS.gene006043.t1.exon3;Parent=MS.gene006043.t1 |
chr1.3 | CDS | 67096013 | 67096288 | 67096013 | ID=cds.MS.gene006043.t1;Parent=MS.gene006043.t1 |
chr1.3 | exon | 67096838 | 67096869 | 67096838 | ID=MS.gene006043.t1.exon4;Parent=MS.gene006043.t1 |
chr1.3 | CDS | 67096838 | 67096869 | 67096838 | ID=cds.MS.gene006043.t1;Parent=MS.gene006043.t1 |
Gene Sequence |
Protein sequence |