Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene006081.t1 | XP_013469571.1 | 98.2 | 571 | 10 | 0 | 1 | 571 | 1 | 571 | 0.00E+00 | 1139.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene006081.t1 | Q9XIC5 | 42.8 | 593 | 268 | 17 | 4 | 567 | 1 | 551 | 2.8e-108 | 394.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene006081.t1 | A0A072VNK6 | 98.2 | 571 | 10 | 0 | 1 | 571 | 1 | 571 | 0.0e+00 | 1139.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene006081.t1 | TF | NAC |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene006081.t1 | MTR_1g097300 | 98.249 | 571 | 10 | 0 | 1 | 571 | 1 | 571 | 0.0 | 1178 |
MS.gene006081.t1 | MTR_1g097300 | 97.680 | 431 | 10 | 0 | 141 | 571 | 1 | 431 | 0.0 | 876 |
MS.gene006081.t1 | MTR_3g096140 | 52.261 | 199 | 90 | 1 | 13 | 211 | 1 | 194 | 1.02e-69 | 226 |
MS.gene006081.t1 | MTR_3g096140 | 52.261 | 199 | 90 | 1 | 13 | 211 | 1 | 194 | 9.94e-69 | 226 |
MS.gene006081.t1 | MTR_8g063550 | 56.000 | 175 | 77 | 0 | 20 | 194 | 7 | 181 | 2.16e-67 | 222 |
MS.gene006081.t1 | MTR_8g063550 | 56.000 | 175 | 77 | 0 | 20 | 194 | 7 | 181 | 4.74e-67 | 224 |
MS.gene006081.t1 | MTR_8g063550 | 56.000 | 175 | 77 | 0 | 20 | 194 | 7 | 181 | 6.98e-67 | 224 |
MS.gene006081.t1 | MTR_8g093580 | 54.857 | 175 | 79 | 0 | 20 | 194 | 7 | 181 | 3.16e-65 | 221 |
MS.gene006081.t1 | MTR_6g477900 | 59.006 | 161 | 66 | 0 | 21 | 181 | 8 | 168 | 1.15e-60 | 201 |
MS.gene006081.t1 | MTR_5g076850 | 61.728 | 162 | 61 | 1 | 21 | 181 | 8 | 169 | 1.29e-60 | 212 |
MS.gene006081.t1 | MTR_0036s0150 | 46.154 | 247 | 119 | 5 | 21 | 254 | 7 | 252 | 1.97e-59 | 207 |
MS.gene006081.t1 | MTR_3g064580 | 60.494 | 162 | 62 | 2 | 21 | 180 | 8 | 169 | 5.26e-59 | 208 |
MS.gene006081.t1 | MTR_1g090723 | 55.882 | 170 | 74 | 1 | 21 | 189 | 10 | 179 | 1.95e-58 | 206 |
MS.gene006081.t1 | MTR_3g096140 | 51.124 | 178 | 82 | 1 | 34 | 211 | 1 | 173 | 1.99e-58 | 198 |
MS.gene006081.t1 | MTR_2g064090 | 58.065 | 155 | 64 | 1 | 17 | 170 | 4 | 158 | 6.36e-58 | 197 |
MS.gene006081.t1 | MTR_1g090723 | 55.882 | 170 | 73 | 2 | 21 | 189 | 10 | 178 | 7.10e-58 | 204 |
MS.gene006081.t1 | MTR_1g090723 | 55.882 | 170 | 73 | 2 | 21 | 189 | 10 | 178 | 1.07e-57 | 204 |
MS.gene006081.t1 | MTR_1g090720 | 56.111 | 180 | 72 | 2 | 18 | 191 | 41 | 219 | 2.71e-57 | 199 |
MS.gene006081.t1 | MTR_5g014300 | 56.410 | 156 | 58 | 2 | 21 | 169 | 8 | 160 | 8.33e-53 | 183 |
MS.gene006081.t1 | MTR_4g098630 | 55.696 | 158 | 67 | 1 | 15 | 169 | 2 | 159 | 1.65e-52 | 182 |
MS.gene006081.t1 | MTR_3g093040 | 50.898 | 167 | 77 | 2 | 9 | 170 | 93 | 259 | 7.62e-52 | 180 |
MS.gene006081.t1 | MTR_3g093050 | 52.601 | 173 | 79 | 2 | 1 | 170 | 1 | 173 | 2.03e-50 | 183 |
MS.gene006081.t1 | MTR_3g093050 | 52.601 | 173 | 79 | 2 | 1 | 170 | 1 | 173 | 4.65e-50 | 182 |
MS.gene006081.t1 | MTR_5g069030 | 49.714 | 175 | 82 | 1 | 1 | 169 | 1 | 175 | 7.09e-48 | 177 |
MS.gene006081.t1 | MTR_4g036030 | 49.333 | 150 | 73 | 2 | 21 | 169 | 9 | 156 | 3.84e-47 | 168 |
MS.gene006081.t1 | MTR_2g086880 | 56.028 | 141 | 58 | 2 | 18 | 155 | 17 | 156 | 1.69e-46 | 171 |
MS.gene006081.t1 | MTR_2g086880 | 55.782 | 147 | 60 | 3 | 13 | 155 | 11 | 156 | 3.22e-46 | 171 |
MS.gene006081.t1 | MTR_2g062730 | 47.682 | 151 | 75 | 3 | 21 | 169 | 12 | 160 | 1.00e-45 | 164 |
MS.gene006081.t1 | MTR_5g021710 | 52.672 | 131 | 61 | 1 | 21 | 150 | 10 | 140 | 1.29e-45 | 164 |
MS.gene006081.t1 | MTR_6g032770 | 42.718 | 206 | 105 | 7 | 22 | 221 | 21 | 219 | 1.74e-45 | 165 |
MS.gene006081.t1 | MTR_4g108760 | 47.853 | 163 | 81 | 2 | 15 | 175 | 13 | 173 | 2.82e-45 | 164 |
MS.gene006081.t1 | MTR_4g101680 | 46.067 | 178 | 85 | 6 | 21 | 194 | 9 | 179 | 3.92e-45 | 164 |
MS.gene006081.t1 | MTR_2g078700 | 51.266 | 158 | 69 | 4 | 21 | 173 | 25 | 179 | 3.93e-45 | 164 |
MS.gene006081.t1 | MTR_8g076110 | 47.333 | 150 | 76 | 2 | 21 | 169 | 8 | 155 | 6.10e-45 | 161 |
MS.gene006081.t1 | MTR_4g035590 | 49.333 | 150 | 72 | 2 | 21 | 169 | 10 | 156 | 1.33e-44 | 162 |
MS.gene006081.t1 | MTR_3g435150 | 49.045 | 157 | 76 | 2 | 21 | 175 | 18 | 172 | 1.35e-44 | 160 |
MS.gene006081.t1 | MTR_5g041940 | 47.134 | 157 | 77 | 2 | 17 | 169 | 1 | 155 | 1.86e-44 | 159 |
MS.gene006081.t1 | MTR_6g011860 | 50.000 | 162 | 67 | 5 | 20 | 170 | 16 | 174 | 2.07e-44 | 162 |
MS.gene006081.t1 | MTR_5g012080 | 47.682 | 151 | 76 | 3 | 21 | 169 | 9 | 158 | 2.24e-44 | 161 |
MS.gene006081.t1 | MTR_2g079990 | 45.283 | 159 | 85 | 1 | 17 | 175 | 14 | 170 | 2.63e-44 | 161 |
MS.gene006081.t1 | MTR_8g467490 | 47.024 | 168 | 72 | 5 | 15 | 170 | 12 | 174 | 3.56e-44 | 162 |
MS.gene006081.t1 | MTR_4g081870 | 46.497 | 157 | 78 | 2 | 21 | 173 | 11 | 165 | 6.70e-44 | 157 |
MS.gene006081.t1 | MTR_4g134460 | 50.327 | 153 | 71 | 3 | 20 | 171 | 55 | 203 | 7.27e-44 | 162 |
MS.gene006081.t1 | MTR_7g085220 | 46.012 | 163 | 73 | 4 | 21 | 170 | 10 | 170 | 1.21e-43 | 159 |
MS.gene006081.t1 | MTR_6g012670 | 49.367 | 158 | 74 | 4 | 21 | 175 | 22 | 176 | 1.72e-43 | 158 |
MS.gene006081.t1 | MTR_5g040420 | 45.963 | 161 | 75 | 3 | 20 | 170 | 15 | 173 | 1.92e-43 | 159 |
MS.gene006081.t1 | MTR_3g109340 | 50.955 | 157 | 71 | 3 | 21 | 175 | 24 | 176 | 2.06e-43 | 159 |
MS.gene006081.t1 | MTR_1g096430 | 48.750 | 160 | 75 | 3 | 21 | 177 | 9 | 164 | 2.27e-43 | 158 |
MS.gene006081.t1 | MTR_3g088110 | 49.351 | 154 | 72 | 3 | 21 | 171 | 9 | 159 | 2.34e-43 | 156 |
MS.gene006081.t1 | MTR_3g070030 | 38.696 | 230 | 105 | 6 | 22 | 223 | 22 | 243 | 2.93e-43 | 158 |
MS.gene006081.t1 | MTR_2g080010 | 48.980 | 147 | 71 | 2 | 6 | 150 | 2 | 146 | 6.11e-43 | 157 |
MS.gene006081.t1 | MTR_6g084430 | 48.667 | 150 | 73 | 2 | 21 | 170 | 7 | 152 | 6.92e-43 | 156 |
MS.gene006081.t1 | MTR_7g085260 | 47.771 | 157 | 72 | 4 | 21 | 170 | 19 | 172 | 1.49e-42 | 157 |
MS.gene006081.t1 | MTR_2g079990 | 51.538 | 130 | 61 | 1 | 17 | 146 | 14 | 141 | 1.64e-42 | 157 |
MS.gene006081.t1 | MTR_4g075980 | 48.387 | 155 | 70 | 4 | 19 | 170 | 15 | 162 | 2.28e-42 | 154 |
MS.gene006081.t1 | MTR_4g089135 | 53.030 | 132 | 58 | 2 | 21 | 150 | 17 | 146 | 2.33e-42 | 155 |
MS.gene006081.t1 | MTR_8g094580 | 41.414 | 198 | 109 | 4 | 21 | 214 | 9 | 203 | 2.42e-42 | 154 |
MS.gene006081.t1 | MTR_8g024480 | 49.231 | 130 | 65 | 1 | 21 | 149 | 17 | 146 | 3.07e-42 | 157 |
MS.gene006081.t1 | MTR_8g059170 | 46.795 | 156 | 79 | 3 | 17 | 170 | 12 | 165 | 4.88e-42 | 154 |
MS.gene006081.t1 | MTR_3g096920 | 48.701 | 154 | 73 | 3 | 21 | 171 | 9 | 159 | 5.39e-42 | 153 |
MS.gene006081.t1 | MTR_2157s0010 | 45.509 | 167 | 75 | 4 | 21 | 174 | 10 | 173 | 7.34e-42 | 152 |
MS.gene006081.t1 | MTR_3g109340 | 49.367 | 158 | 73 | 4 | 21 | 175 | 24 | 177 | 9.95e-42 | 154 |
MS.gene006081.t1 | MTR_3g116070 | 50.311 | 161 | 70 | 6 | 21 | 174 | 25 | 182 | 1.58e-41 | 153 |
MS.gene006081.t1 | MTR_2g093810 | 49.635 | 137 | 65 | 2 | 21 | 155 | 16 | 150 | 2.01e-41 | 152 |
MS.gene006081.t1 | MTR_3g096920 | 54.762 | 126 | 54 | 2 | 21 | 146 | 9 | 131 | 3.62e-41 | 152 |
MS.gene006081.t1 | MTR_7g005280 | 48.171 | 164 | 70 | 5 | 21 | 179 | 17 | 170 | 1.02e-40 | 148 |
MS.gene006081.t1 | MTR_1g008740 | 49.375 | 160 | 71 | 6 | 21 | 175 | 15 | 169 | 2.63e-40 | 150 |
MS.gene006081.t1 | MTR_1g008740 | 49.375 | 160 | 71 | 6 | 21 | 175 | 29 | 183 | 4.12e-40 | 150 |
MS.gene006081.t1 | MTR_7g100990 | 43.312 | 157 | 81 | 3 | 21 | 171 | 13 | 167 | 1.59e-39 | 147 |
MS.gene006081.t1 | MTR_7g011130 | 51.538 | 130 | 61 | 1 | 22 | 151 | 22 | 149 | 4.58e-39 | 146 |
MS.gene006081.t1 | MTR_7g011120 | 43.529 | 170 | 84 | 3 | 22 | 181 | 11 | 178 | 1.94e-38 | 144 |
MS.gene006081.t1 | MTR_2g068880 | 42.169 | 166 | 80 | 4 | 20 | 170 | 23 | 187 | 6.72e-38 | 142 |
MS.gene006081.t1 | MTR_5g090970 | 44.444 | 162 | 76 | 4 | 20 | 169 | 19 | 178 | 3.07e-37 | 140 |
MS.gene006081.t1 | MTR_2g068920 | 48.855 | 131 | 62 | 2 | 20 | 146 | 22 | 151 | 3.90e-37 | 139 |
MS.gene006081.t1 | MTR_5g090970 | 43.827 | 162 | 76 | 4 | 20 | 169 | 19 | 177 | 1.05e-36 | 139 |
MS.gene006081.t1 | MTR_1g069805 | 45.033 | 151 | 75 | 3 | 21 | 169 | 12 | 156 | 4.11e-36 | 136 |
MS.gene006081.t1 | MTR_2g064470 | 51.181 | 127 | 58 | 3 | 21 | 147 | 13 | 135 | 5.43e-36 | 137 |
MS.gene006081.t1 | MTR_3g070040 | 43.636 | 165 | 81 | 4 | 23 | 181 | 12 | 170 | 2.85e-35 | 135 |
MS.gene006081.t1 | MTR_8g023840 | 53.968 | 126 | 54 | 3 | 22 | 144 | 14 | 138 | 5.16e-35 | 136 |
MS.gene006081.t1 | MTR_7g097090 | 44.966 | 149 | 74 | 3 | 21 | 167 | 12 | 154 | 7.33e-35 | 133 |
MS.gene006081.t1 | MTR_8g023860 | 47.368 | 152 | 70 | 6 | 13 | 155 | 5 | 155 | 4.26e-33 | 131 |
MS.gene006081.t1 | MTR_8g023900 | 45.223 | 157 | 74 | 6 | 13 | 158 | 5 | 160 | 3.32e-32 | 130 |
MS.gene006081.t1 | MTR_8g023900 | 42.857 | 147 | 75 | 5 | 22 | 160 | 196 | 341 | 1.38e-28 | 119 |
MS.gene006081.t1 | MTR_8g099750 | 47.656 | 128 | 61 | 2 | 21 | 146 | 16 | 139 | 2.88e-31 | 121 |
MS.gene006081.t1 | MTR_3g098810 | 40.719 | 167 | 85 | 3 | 21 | 177 | 16 | 178 | 4.94e-31 | 121 |
MS.gene006081.t1 | MTR_7g105170 | 42.236 | 161 | 81 | 6 | 21 | 170 | 6 | 165 | 4.45e-30 | 119 |
MS.gene006081.t1 | MTR_3g098810 | 43.421 | 152 | 77 | 3 | 21 | 167 | 16 | 163 | 4.76e-30 | 116 |
MS.gene006081.t1 | MTR_8g023930 | 42.759 | 145 | 74 | 5 | 22 | 158 | 27 | 170 | 1.45e-27 | 116 |
MS.gene006081.t1 | MTR_2g086690 | 39.752 | 161 | 89 | 5 | 19 | 171 | 4 | 164 | 2.12e-27 | 111 |
MS.gene006081.t1 | MTR_4g052620 | 44.961 | 129 | 65 | 4 | 21 | 144 | 7 | 134 | 3.41e-25 | 105 |
MS.gene006081.t1 | MTR_8g094580 | 37.671 | 146 | 86 | 3 | 73 | 214 | 5 | 149 | 1.21e-24 | 103 |
MS.gene006081.t1 | MTR_8g023880 | 39.394 | 165 | 76 | 7 | 15 | 158 | 2 | 163 | 7.28e-24 | 101 |
MS.gene006081.t1 | MTR_4g094302 | 39.062 | 128 | 66 | 4 | 21 | 146 | 13 | 130 | 1.05e-22 | 95.1 |
MS.gene006081.t1 | MTR_4g094302 | 39.062 | 128 | 66 | 4 | 21 | 146 | 13 | 130 | 1.98e-22 | 95.5 |
MS.gene006081.t1 | MTR_7g070140 | 47.368 | 76 | 38 | 1 | 74 | 147 | 17 | 92 | 1.47e-18 | 82.8 |
MS.gene006081.t1 | MTR_7g083330 | 31.361 | 169 | 106 | 5 | 3 | 168 | 2 | 163 | 3.43e-16 | 77.8 |
MS.gene006081.t1 | MTR_7g083360 | 31.746 | 126 | 82 | 3 | 22 | 146 | 13 | 135 | 8.77e-16 | 75.5 |
MS.gene006081.t1 | MTR_7g083370 | 29.231 | 130 | 88 | 3 | 22 | 150 | 13 | 139 | 1.30e-11 | 63.2 |
MS.gene006081.t1 | MTR_1g087190 | 58.696 | 46 | 18 | 1 | 21 | 65 | 7 | 52 | 2.46e-11 | 59.3 |
MS.gene006081.t1 | MTR_8g093790 | 33.333 | 126 | 66 | 5 | 21 | 146 | 12 | 119 | 4.18e-11 | 62.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene006081.t1 | AT1G34190 | 43.121 | 596 | 266 | 19 | 4 | 569 | 1 | 553 | 7.45e-139 | 414 |
MS.gene006081.t1 | AT1G34180 | 41.356 | 590 | 286 | 19 | 6 | 567 | 3 | 560 | 3.03e-125 | 380 |
MS.gene006081.t1 | AT1G34180 | 40.532 | 602 | 286 | 20 | 6 | 567 | 3 | 572 | 1.30e-121 | 370 |
MS.gene006081.t1 | AT1G34180 | 47.354 | 378 | 161 | 10 | 6 | 370 | 3 | 355 | 4.63e-99 | 308 |
MS.gene006081.t1 | AT1G34180 | 45.897 | 390 | 161 | 11 | 6 | 370 | 3 | 367 | 1.26e-95 | 300 |
MS.gene006081.t1 | AT1G32870 | 37.655 | 563 | 285 | 16 | 21 | 567 | 12 | 524 | 6.19e-86 | 276 |
MS.gene006081.t1 | AT1G32870 | 37.655 | 563 | 285 | 16 | 21 | 567 | 48 | 560 | 2.66e-85 | 276 |
MS.gene006081.t1 | AT5G09330 | 41.791 | 335 | 173 | 8 | 21 | 339 | 8 | 336 | 1.19e-72 | 241 |
MS.gene006081.t1 | AT5G09330 | 41.791 | 335 | 173 | 8 | 21 | 339 | 8 | 336 | 1.19e-72 | 241 |
MS.gene006081.t1 | AT5G09330 | 41.791 | 335 | 173 | 8 | 21 | 339 | 8 | 336 | 1.19e-72 | 241 |
MS.gene006081.t1 | AT5G09330 | 41.791 | 335 | 173 | 8 | 21 | 339 | 8 | 336 | 1.19e-72 | 241 |
MS.gene006081.t1 | AT5G09330 | 41.791 | 335 | 173 | 8 | 21 | 339 | 8 | 336 | 1.19e-72 | 241 |
MS.gene006081.t1 | AT1G32870 | 59.829 | 234 | 86 | 5 | 21 | 249 | 12 | 242 | 2.10e-70 | 236 |
MS.gene006081.t1 | AT1G32870 | 27.444 | 266 | 161 | 7 | 330 | 567 | 257 | 518 | 5.11e-13 | 72.0 |
MS.gene006081.t1 | AT5G04410 | 58.333 | 180 | 75 | 0 | 16 | 195 | 6 | 185 | 2.63e-69 | 234 |
MS.gene006081.t1 | AT5G64060 | 54.971 | 171 | 77 | 0 | 21 | 191 | 8 | 178 | 3.42e-66 | 219 |
MS.gene006081.t1 | AT3G10500 | 59.763 | 169 | 68 | 0 | 16 | 184 | 6 | 174 | 6.81e-65 | 221 |
MS.gene006081.t1 | AT3G10480 | 45.560 | 259 | 131 | 5 | 1 | 250 | 6 | 263 | 1.18e-62 | 213 |
MS.gene006081.t1 | AT3G10490 | 55.026 | 189 | 82 | 3 | 7 | 193 | 14 | 201 | 1.23e-61 | 204 |
MS.gene006081.t1 | AT3G10480 | 45.385 | 260 | 131 | 6 | 1 | 250 | 6 | 264 | 2.08e-61 | 209 |
MS.gene006081.t1 | AT1G65910 | 60.366 | 164 | 65 | 0 | 17 | 180 | 4 | 167 | 2.38e-61 | 214 |
MS.gene006081.t1 | AT3G17730 | 61.589 | 151 | 58 | 0 | 21 | 171 | 8 | 158 | 5.48e-61 | 202 |
MS.gene006081.t1 | AT3G10490 | 48.291 | 234 | 112 | 4 | 7 | 238 | 14 | 240 | 5.78e-61 | 209 |
MS.gene006081.t1 | AT5G17260 | 60.000 | 150 | 59 | 1 | 21 | 169 | 8 | 157 | 6.98e-58 | 201 |
MS.gene006081.t1 | AT3G03200 | 60.667 | 150 | 58 | 1 | 21 | 169 | 8 | 157 | 2.85e-57 | 199 |
MS.gene006081.t1 | AT3G10480 | 43.580 | 257 | 104 | 5 | 1 | 217 | 6 | 261 | 9.54e-56 | 196 |
MS.gene006081.t1 | AT1G54330 | 56.604 | 159 | 66 | 1 | 17 | 175 | 4 | 159 | 1.47e-52 | 182 |
MS.gene006081.t1 | AT1G33060 | 56.494 | 154 | 66 | 1 | 17 | 169 | 21 | 174 | 2.50e-51 | 187 |
MS.gene006081.t1 | AT1G33060 | 56.494 | 154 | 66 | 1 | 17 | 169 | 21 | 174 | 2.97e-51 | 187 |
MS.gene006081.t1 | AT5G46590 | 53.289 | 152 | 69 | 2 | 21 | 170 | 8 | 159 | 4.60e-51 | 177 |
MS.gene006081.t1 | AT4G35580 | 54.118 | 170 | 66 | 2 | 1 | 169 | 1 | 159 | 1.09e-50 | 182 |
MS.gene006081.t1 | AT4G35580 | 54.118 | 170 | 66 | 2 | 1 | 169 | 1 | 159 | 1.11e-50 | 183 |
MS.gene006081.t1 | AT4G35580 | 54.118 | 170 | 66 | 2 | 1 | 169 | 1 | 159 | 1.11e-50 | 183 |
MS.gene006081.t1 | AT1G32510 | 54.430 | 158 | 64 | 2 | 21 | 170 | 8 | 165 | 2.44e-50 | 175 |
MS.gene006081.t1 | AT4G17980 | 55.556 | 153 | 64 | 2 | 21 | 169 | 8 | 160 | 4.53e-50 | 174 |
MS.gene006081.t1 | AT5G46590 | 55.319 | 141 | 61 | 2 | 21 | 159 | 8 | 148 | 5.68e-50 | 174 |
MS.gene006081.t1 | AT4G17980 | 55.195 | 154 | 65 | 2 | 21 | 170 | 8 | 161 | 1.08e-49 | 174 |
MS.gene006081.t1 | AT3G49530 | 45.274 | 201 | 98 | 3 | 17 | 215 | 10 | 200 | 1.82e-48 | 174 |
MS.gene006081.t1 | AT5G24590 | 53.548 | 155 | 70 | 2 | 17 | 169 | 10 | 164 | 2.24e-48 | 174 |
MS.gene006081.t1 | AT2G27300 | 53.289 | 152 | 67 | 2 | 7 | 155 | 2 | 152 | 4.72e-48 | 171 |
MS.gene006081.t1 | AT3G49530 | 45.274 | 201 | 98 | 3 | 17 | 215 | 10 | 200 | 5.56e-48 | 174 |
MS.gene006081.t1 | AT1G62700 | 44.134 | 179 | 89 | 5 | 21 | 194 | 9 | 181 | 1.05e-47 | 171 |
MS.gene006081.t1 | AT1G62700 | 44.134 | 179 | 89 | 5 | 21 | 194 | 9 | 181 | 1.05e-47 | 171 |
MS.gene006081.t1 | AT3G44290 | 52.448 | 143 | 64 | 2 | 16 | 155 | 11 | 152 | 1.34e-47 | 166 |
MS.gene006081.t1 | AT5G22290 | 49.045 | 157 | 75 | 2 | 3 | 155 | 5 | 160 | 4.29e-47 | 168 |
MS.gene006081.t1 | AT2G18060 | 44.211 | 190 | 97 | 4 | 15 | 202 | 5 | 187 | 5.08e-47 | 169 |
MS.gene006081.t1 | AT2G18060 | 44.211 | 190 | 97 | 4 | 15 | 202 | 5 | 187 | 5.08e-47 | 169 |
MS.gene006081.t1 | AT3G44290 | 52.448 | 143 | 64 | 2 | 16 | 155 | 11 | 152 | 5.95e-47 | 167 |
MS.gene006081.t1 | AT4G36160 | 49.669 | 151 | 70 | 2 | 1 | 150 | 1 | 146 | 7.54e-47 | 169 |
MS.gene006081.t1 | AT1G33280 | 50.667 | 150 | 70 | 2 | 21 | 169 | 10 | 156 | 2.78e-46 | 165 |
MS.gene006081.t1 | AT1G12260 | 48.684 | 152 | 71 | 3 | 21 | 169 | 9 | 156 | 2.91e-46 | 166 |
MS.gene006081.t1 | AT1G12260 | 44.068 | 177 | 90 | 4 | 21 | 194 | 9 | 179 | 3.21e-46 | 167 |
MS.gene006081.t1 | AT4G36160 | 53.435 | 131 | 60 | 1 | 21 | 150 | 12 | 142 | 3.48e-46 | 167 |
MS.gene006081.t1 | AT4G36160 | 53.435 | 131 | 60 | 1 | 21 | 150 | 12 | 142 | 3.48e-46 | 167 |
MS.gene006081.t1 | AT1G69490 | 45.312 | 192 | 96 | 5 | 21 | 208 | 11 | 197 | 5.59e-46 | 163 |
MS.gene006081.t1 | AT5G66300 | 46.951 | 164 | 85 | 2 | 21 | 183 | 14 | 176 | 7.18e-46 | 163 |
MS.gene006081.t1 | AT4G27410 | 47.403 | 154 | 79 | 1 | 17 | 170 | 12 | 163 | 7.95e-46 | 163 |
MS.gene006081.t1 | AT5G07680 | 47.853 | 163 | 81 | 2 | 15 | 175 | 13 | 173 | 9.97e-46 | 164 |
MS.gene006081.t1 | AT4G10350 | 48.667 | 150 | 76 | 1 | 21 | 169 | 11 | 160 | 1.38e-45 | 164 |
MS.gene006081.t1 | AT5G07680 | 47.826 | 161 | 80 | 2 | 17 | 175 | 1 | 159 | 1.64e-45 | 163 |
MS.gene006081.t1 | AT5G61430 | 47.853 | 163 | 81 | 2 | 15 | 175 | 12 | 172 | 1.94e-45 | 164 |
MS.gene006081.t1 | AT5G39820 | 51.049 | 143 | 64 | 3 | 6 | 146 | 9 | 147 | 8.04e-45 | 162 |
MS.gene006081.t1 | AT1G01720 | 44.865 | 185 | 89 | 5 | 13 | 188 | 1 | 181 | 8.26e-45 | 160 |
MS.gene006081.t1 | AT5G39610 | 50.000 | 160 | 70 | 3 | 21 | 175 | 22 | 176 | 1.17e-44 | 160 |
MS.gene006081.t1 | AT5G62380 | 53.435 | 131 | 60 | 1 | 21 | 150 | 9 | 139 | 1.26e-44 | 162 |
MS.gene006081.t1 | AT5G62380 | 53.435 | 131 | 60 | 1 | 21 | 150 | 9 | 139 | 1.26e-44 | 162 |
MS.gene006081.t1 | AT1G71930 | 44.444 | 180 | 85 | 5 | 16 | 191 | 5 | 173 | 1.37e-44 | 161 |
MS.gene006081.t1 | AT1G71930 | 44.444 | 180 | 85 | 5 | 16 | 191 | 5 | 173 | 1.37e-44 | 161 |
MS.gene006081.t1 | AT3G15500 | 47.059 | 153 | 79 | 1 | 17 | 169 | 12 | 162 | 3.20e-44 | 160 |
MS.gene006081.t1 | AT1G79580 | 47.097 | 155 | 77 | 3 | 17 | 169 | 15 | 166 | 5.36e-44 | 160 |
MS.gene006081.t1 | AT1G79580 | 47.097 | 155 | 77 | 3 | 17 | 169 | 15 | 166 | 5.36e-44 | 160 |
MS.gene006081.t1 | AT1G79580 | 47.097 | 155 | 77 | 3 | 17 | 169 | 15 | 166 | 5.36e-44 | 160 |
MS.gene006081.t1 | AT1G79580 | 47.097 | 155 | 77 | 3 | 17 | 169 | 15 | 166 | 5.36e-44 | 160 |
MS.gene006081.t1 | AT1G79580 | 47.097 | 155 | 77 | 3 | 17 | 169 | 15 | 166 | 5.36e-44 | 160 |
MS.gene006081.t1 | AT3G29035 | 46.552 | 174 | 85 | 3 | 14 | 183 | 19 | 188 | 1.03e-43 | 158 |
MS.gene006081.t1 | AT3G04060 | 48.780 | 164 | 73 | 4 | 15 | 172 | 16 | 174 | 1.15e-43 | 159 |
MS.gene006081.t1 | AT5G18270 | 40.000 | 215 | 107 | 6 | 15 | 225 | 17 | 213 | 1.66e-43 | 158 |
MS.gene006081.t1 | AT5G18270 | 40.000 | 215 | 107 | 6 | 15 | 225 | 17 | 213 | 1.85e-43 | 158 |
MS.gene006081.t1 | AT2G17040 | 50.649 | 154 | 66 | 4 | 20 | 170 | 7 | 153 | 1.91e-43 | 156 |
MS.gene006081.t1 | AT1G52890 | 45.283 | 159 | 85 | 1 | 17 | 175 | 12 | 168 | 3.51e-43 | 157 |
MS.gene006081.t1 | AT4G27410 | 43.787 | 169 | 80 | 1 | 17 | 170 | 12 | 180 | 5.64e-43 | 156 |
MS.gene006081.t1 | AT2G02450 | 48.366 | 153 | 74 | 3 | 20 | 171 | 52 | 200 | 8.71e-43 | 157 |
MS.gene006081.t1 | AT2G24430 | 50.327 | 153 | 69 | 4 | 21 | 170 | 18 | 166 | 9.28e-43 | 155 |
MS.gene006081.t1 | AT2G24430 | 50.327 | 153 | 69 | 4 | 21 | 170 | 18 | 166 | 9.28e-43 | 155 |
MS.gene006081.t1 | AT1G77450 | 48.052 | 154 | 74 | 3 | 21 | 171 | 12 | 162 | 1.09e-42 | 154 |
MS.gene006081.t1 | AT2G02450 | 48.366 | 153 | 74 | 3 | 20 | 171 | 52 | 200 | 1.15e-42 | 158 |
MS.gene006081.t1 | AT3G18400 | 46.452 | 155 | 80 | 2 | 21 | 175 | 7 | 158 | 1.44e-42 | 155 |
MS.gene006081.t1 | AT2G43000 | 47.059 | 153 | 78 | 2 | 18 | 169 | 17 | 167 | 1.48e-42 | 154 |
MS.gene006081.t1 | AT1G61110 | 52.857 | 140 | 63 | 2 | 21 | 159 | 18 | 155 | 1.49e-42 | 155 |
MS.gene006081.t1 | AT2G46770 | 46.667 | 150 | 76 | 2 | 1 | 149 | 1 | 147 | 1.52e-42 | 156 |
MS.gene006081.t1 | AT3G61910 | 49.275 | 138 | 68 | 2 | 21 | 156 | 13 | 150 | 2.13e-42 | 155 |
MS.gene006081.t1 | AT1G76420 | 50.968 | 155 | 67 | 4 | 21 | 171 | 24 | 173 | 2.72e-42 | 155 |
MS.gene006081.t1 | AT3G15170 | 51.282 | 156 | 68 | 4 | 21 | 171 | 22 | 174 | 3.49e-42 | 154 |
MS.gene006081.t1 | AT1G32770 | 50.388 | 129 | 63 | 1 | 21 | 148 | 18 | 146 | 3.57e-42 | 155 |
MS.gene006081.t1 | AT1G26870 | 46.626 | 163 | 72 | 4 | 20 | 170 | 17 | 176 | 4.04e-42 | 157 |
MS.gene006081.t1 | AT5G63790 | 46.452 | 155 | 75 | 3 | 22 | 171 | 53 | 204 | 5.62e-42 | 154 |
MS.gene006081.t1 | AT5G63790 | 46.452 | 155 | 75 | 3 | 22 | 171 | 63 | 214 | 8.10e-42 | 153 |
MS.gene006081.t1 | AT5G53950 | 50.641 | 156 | 67 | 5 | 21 | 170 | 19 | 170 | 1.04e-41 | 154 |
MS.gene006081.t1 | AT5G08790 | 47.097 | 155 | 74 | 3 | 22 | 171 | 10 | 161 | 1.36e-41 | 152 |
MS.gene006081.t1 | AT5G13180 | 47.853 | 163 | 77 | 3 | 16 | 176 | 11 | 167 | 3.69e-41 | 149 |
MS.gene006081.t1 | AT3G04070 | 42.593 | 162 | 79 | 4 | 21 | 170 | 12 | 171 | 4.00e-41 | 152 |
MS.gene006081.t1 | AT3G15510 | 38.571 | 210 | 104 | 4 | 23 | 219 | 21 | 218 | 7.02e-41 | 152 |
MS.gene006081.t1 | AT3G04070 | 48.092 | 131 | 61 | 2 | 21 | 146 | 12 | 140 | 2.21e-40 | 150 |
MS.gene006081.t1 | AT2G33480 | 48.701 | 154 | 74 | 1 | 16 | 169 | 12 | 160 | 1.48e-39 | 145 |
MS.gene006081.t1 | AT2G33480 | 48.701 | 154 | 72 | 2 | 16 | 169 | 12 | 158 | 2.92e-39 | 145 |
MS.gene006081.t1 | AT3G12977 | 44.156 | 154 | 83 | 2 | 21 | 173 | 20 | 171 | 6.60e-38 | 141 |
MS.gene006081.t1 | AT1G56010 | 41.765 | 170 | 93 | 3 | 21 | 186 | 21 | 188 | 3.73e-37 | 140 |
MS.gene006081.t1 | AT5G04395 | 42.683 | 164 | 79 | 3 | 2 | 150 | 10 | 173 | 5.08e-35 | 130 |
MS.gene006081.t1 | AT1G52880 | 46.250 | 160 | 72 | 3 | 23 | 170 | 21 | 178 | 7.16e-35 | 134 |
MS.gene006081.t1 | AT3G12910 | 48.485 | 132 | 60 | 3 | 20 | 146 | 22 | 150 | 6.80e-34 | 131 |
MS.gene006081.t1 | AT4G28530 | 42.604 | 169 | 69 | 6 | 21 | 169 | 12 | 172 | 1.01e-31 | 126 |
MS.gene006081.t1 | AT5G61430 | 50.467 | 107 | 51 | 1 | 71 | 175 | 3 | 109 | 1.19e-30 | 121 |
MS.gene006081.t1 | AT3G44350 | 39.355 | 155 | 89 | 5 | 22 | 171 | 8 | 162 | 1.65e-28 | 114 |
MS.gene006081.t1 | AT4G01550 | 38.857 | 175 | 94 | 5 | 16 | 183 | 1 | 169 | 1.76e-28 | 119 |
MS.gene006081.t1 | AT5G22380 | 40.764 | 157 | 86 | 6 | 22 | 171 | 8 | 164 | 6.14e-28 | 112 |
MS.gene006081.t1 | AT3G44350 | 40.523 | 153 | 86 | 5 | 22 | 169 | 8 | 160 | 1.01e-27 | 109 |
MS.gene006081.t1 | AT3G10490 | 45.205 | 146 | 72 | 3 | 94 | 238 | 2 | 140 | 1.23e-27 | 114 |
MS.gene006081.t1 | AT3G10490 | 45.205 | 146 | 72 | 3 | 94 | 238 | 2 | 140 | 1.23e-27 | 114 |
MS.gene006081.t1 | AT4G10350 | 45.918 | 98 | 53 | 0 | 72 | 169 | 16 | 113 | 8.64e-27 | 110 |
MS.gene006081.t1 | AT1G56010 | 44.444 | 117 | 62 | 1 | 73 | 186 | 5 | 121 | 1.09e-26 | 109 |
MS.gene006081.t1 | AT3G04420 | 40.800 | 125 | 72 | 1 | 22 | 144 | 6 | 130 | 2.96e-26 | 109 |
MS.gene006081.t1 | AT3G12977 | 46.154 | 104 | 55 | 1 | 71 | 173 | 15 | 118 | 4.15e-26 | 107 |
MS.gene006081.t1 | AT3G04420 | 40.800 | 125 | 72 | 1 | 22 | 144 | 6 | 130 | 1.07e-25 | 108 |
MS.gene006081.t1 | AT4G01520 | 39.706 | 136 | 77 | 3 | 16 | 146 | 1 | 136 | 1.18e-24 | 105 |
MS.gene006081.t1 | AT4G01540 | 39.706 | 136 | 77 | 3 | 16 | 146 | 1 | 136 | 1.99e-24 | 106 |
MS.gene006081.t1 | AT4G01540 | 39.706 | 136 | 77 | 3 | 16 | 146 | 1 | 136 | 2.09e-24 | 106 |
MS.gene006081.t1 | AT4G01540 | 39.706 | 136 | 77 | 3 | 16 | 146 | 1 | 136 | 2.74e-24 | 106 |
MS.gene006081.t1 | AT4G01540 | 39.706 | 136 | 77 | 3 | 16 | 146 | 1 | 136 | 2.89e-24 | 105 |
MS.gene006081.t1 | AT5G64530 | 39.552 | 134 | 65 | 5 | 17 | 148 | 1 | 120 | 6.73e-23 | 95.9 |
MS.gene006081.t1 | AT5G64530 | 40.152 | 132 | 63 | 5 | 17 | 146 | 1 | 118 | 4.04e-22 | 94.7 |
MS.gene006081.t1 | AT1G02230 | 40.625 | 128 | 68 | 3 | 22 | 144 | 6 | 130 | 1.06e-21 | 97.4 |
MS.gene006081.t1 | AT1G02250 | 38.346 | 133 | 74 | 3 | 17 | 144 | 1 | 130 | 2.56e-21 | 96.3 |
MS.gene006081.t1 | AT2G33480 | 46.000 | 100 | 52 | 1 | 72 | 169 | 4 | 103 | 3.78e-21 | 92.4 |
MS.gene006081.t1 | AT1G02220 | 37.692 | 130 | 76 | 2 | 17 | 144 | 1 | 127 | 7.12e-20 | 92.4 |
MS.gene006081.t1 | AT4G28530 | 45.370 | 108 | 41 | 3 | 21 | 112 | 12 | 117 | 3.02e-19 | 89.4 |
MS.gene006081.t1 | AT1G01010 | 37.589 | 141 | 76 | 3 | 17 | 147 | 1 | 139 | 9.32e-18 | 86.3 |
MS.gene006081.t1 | AT5G14000 | 32.283 | 127 | 80 | 2 | 22 | 146 | 18 | 140 | 4.54e-17 | 79.0 |
MS.gene006081.t1 | AT5G22290 | 56.667 | 60 | 22 | 1 | 100 | 155 | 2 | 61 | 7.11e-17 | 80.9 |
MS.gene006081.t1 | AT2G18060 | 39.583 | 96 | 55 | 2 | 100 | 194 | 3 | 96 | 3.86e-16 | 79.3 |
MS.gene006081.t1 | AT3G56530 | 31.544 | 149 | 97 | 4 | 21 | 167 | 54 | 199 | 5.52e-16 | 79.7 |
MS.gene006081.t1 | AT5G14000 | 30.263 | 152 | 97 | 3 | 22 | 171 | 18 | 162 | 5.79e-16 | 77.4 |
MS.gene006081.t1 | AT2G43000 | 42.045 | 88 | 50 | 1 | 83 | 169 | 2 | 89 | 2.44e-15 | 75.5 |
MS.gene006081.t1 | AT3G55210 | 30.000 | 160 | 94 | 4 | 21 | 167 | 13 | 167 | 4.88e-15 | 76.3 |
MS.gene006081.t1 | AT1G28470 | 34.659 | 176 | 85 | 11 | 17 | 172 | 74 | 239 | 1.01e-11 | 66.6 |
Find 127 sgRNAs with CRISPR-Local
Find 246 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATTGGAAATTTAAGACTATT+AGG | 0.168141 | 1.3:-67715937 | MS.gene006081:CDS |
GCCCATTCTTCTTCTTTAAA+TGG | 0.196298 | 1.3:+67717748 | None:intergenic |
ACAGTTTGATTTGCGTCTTC+TGG | 0.203030 | 1.3:+67716695 | None:intergenic |
CCATACTGTTCACCGTTCTT+AGG | 0.238231 | 1.3:+67717775 | None:intergenic |
GAAATTGATGAAATCATTAA+AGG | 0.241716 | 1.3:-67717616 | MS.gene006081:CDS |
GATCGAGATGGGTGCGGTTT+CGG | 0.256333 | 1.3:-67719282 | None:intergenic |
ATCAAACTGTTGATGAATTC+TGG | 0.264215 | 1.3:-67716682 | MS.gene006081:CDS |
CTGAAAATCCCTTGGTAAAT+CGG | 0.287533 | 1.3:-67716128 | MS.gene006081:CDS |
GCTTTCTTGTGGGTTTCTAT+TGG | 0.323704 | 1.3:-67715955 | MS.gene006081:CDS |
GAACAATCTTTCCTGAAAAC+TGG | 0.333240 | 1.3:-67718217 | MS.gene006081:CDS |
TCCTCCCCGCTTTGAATGTT+CGG | 0.334586 | 1.3:+67716980 | None:intergenic |
TGCTTTATGTGCTTTCTTGT+GGG | 0.339931 | 1.3:-67715965 | MS.gene006081:CDS |
TTGGAAATTTAAGACTATTA+GGG | 0.350725 | 1.3:-67715936 | MS.gene006081:CDS |
TGATGAAGAAACACGAAATA+TGG | 0.352461 | 1.3:-67717161 | MS.gene006081:CDS |
GAGATGTTTCTTTGTGGCCT+GGG | 0.356280 | 1.3:-67716806 | MS.gene006081:CDS |
GCACATAAAGCAATAAGAAT+CGG | 0.388701 | 1.3:+67715976 | None:intergenic |
CACTCAACACATCTTCAAAC+TGG | 0.409957 | 1.3:+67716852 | None:intergenic |
TAAGACATGCCGTGATGTTA+AGG | 0.415877 | 1.3:-67717960 | MS.gene006081:intron |
ATCTGAAAAGGAAGATTTGT+GGG | 0.421125 | 1.3:-67719169 | MS.gene006081:CDS |
TTGATTTGCGTCTTCTGGAT+TGG | 0.421770 | 1.3:+67716700 | None:intergenic |
AGAGATGTTTCTTTGTGGCC+TGG | 0.424888 | 1.3:-67716807 | MS.gene006081:CDS |
GAAATGTGATATACAATTCT+CGG | 0.433492 | 1.3:-67718087 | MS.gene006081:CDS |
ATGAAGAGAGCAGGCAGAAA+GGG | 0.435247 | 1.3:-67716018 | MS.gene006081:CDS |
GTTGAAGTTCAACGTTATCA+AGG | 0.436333 | 1.3:-67719141 | MS.gene006081:CDS |
TTGCTTTATGTGCTTTCTTG+TGG | 0.443767 | 1.3:-67715966 | MS.gene006081:CDS |
CCTAAGAACGGTGAACAGTA+TGG | 0.447178 | 1.3:-67717775 | MS.gene006081:CDS |
CTTCTGGATTGGACAACAAC+TGG | 0.447857 | 1.3:+67716711 | None:intergenic |
CAATAAGAATCGGGAAGAAA+AGG | 0.454768 | 1.3:+67715986 | None:intergenic |
CACCATTTAAAGAAGAAGAA+TGG | 0.455058 | 1.3:-67717750 | MS.gene006081:CDS |
TGTATTTGAAAATGTAGATT+CGG | 0.456852 | 1.3:+67716907 | None:intergenic |
GATGCAGAGATGTTTCTTTG+TGG | 0.460432 | 1.3:-67716812 | MS.gene006081:CDS |
CACATAAAGCAATAAGAATC+GGG | 0.470798 | 1.3:+67715977 | None:intergenic |
AAATTGATGAAATCATTAAA+GGG | 0.472368 | 1.3:-67717615 | MS.gene006081:CDS |
TTAATGTAAATTCAGTTGAC+CGG | 0.472399 | 1.3:-67717705 | MS.gene006081:CDS |
TAGTGGTGAGCGAACTGATT+GGG | 0.473263 | 1.3:-67718017 | MS.gene006081:CDS |
GAGGTGATGTCGTCGATGCC+AGG | 0.473742 | 1.3:-67719233 | MS.gene006081:CDS |
TGAAAATCCCTTGGTAAATC+GGG | 0.476781 | 1.3:-67716127 | MS.gene006081:CDS |
TGGTTATGTTGACTTTCCTC+AGG | 0.478965 | 1.3:-67717551 | MS.gene006081:intron |
ACCATTTAAAGAAGAAGAAT+GGG | 0.480249 | 1.3:-67717749 | MS.gene006081:CDS |
TCTTTCTCTCTAACAAATCC+AGG | 0.483310 | 1.3:-67716611 | MS.gene006081:intron |
TGGTGATGTATTATCTGAAA+AGG | 0.485179 | 1.3:-67719181 | MS.gene006081:CDS |
AAAGAAACATCTCTGCATCT+TGG | 0.490156 | 1.3:+67716816 | None:intergenic |
GGACTATTATGCACTTTACA+AGG | 0.492066 | 1.3:-67717821 | MS.gene006081:CDS |
CGACTAGACCTTCCACCGTT+AGG | 0.494968 | 1.3:+67718151 | None:intergenic |
ATCGAATGTCTAGCTTCAGC+AGG | 0.496594 | 1.3:-67716098 | MS.gene006081:CDS |
ATCACCAACTCCTCATCTGT+TGG | 0.497258 | 1.3:+67719197 | None:intergenic |
CATGGCTACTGGAAAGCTAC+TGG | 0.501589 | 1.3:-67718118 | MS.gene006081:CDS |
TTGATGATTGAAGTCAAAGC+TGG | 0.501672 | 1.3:+67717054 | None:intergenic |
ACCTGCAGCAATGTTGTTGT+CGG | 0.505799 | 1.3:+67716059 | None:intergenic |
TATCTGAAAAGGAAGATTTG+TGG | 0.507777 | 1.3:-67719170 | MS.gene006081:CDS |
ACATTGTCAACAGCAGCCTC+TGG | 0.508902 | 1.3:+67717676 | None:intergenic |
CAAATACCAGGTAAATCCTC+AGG | 0.509072 | 1.3:+67719095 | None:intergenic |
AACATCTCTGCATCTTGGTA+AGG | 0.509554 | 1.3:+67716821 | None:intergenic |
AGGAAACTGATGTGTACAAG+TGG | 0.511941 | 1.3:-67719121 | MS.gene006081:CDS |
TTCGGAGTGGAAGTGACCTC+AGG | 0.519504 | 1.3:+67716998 | None:intergenic |
TAGATTCTCCTCAGCTCTGT+GGG | 0.520308 | 1.3:-67716190 | MS.gene006081:CDS |
TGCAGCAATGTTGTTGTCGG+TGG | 0.520896 | 1.3:+67716062 | None:intergenic |
CATAACCATTCACATGTTGC+TGG | 0.521973 | 1.3:+67717566 | None:intergenic |
GAGCAACTAGACATGGCTAC+TGG | 0.524027 | 1.3:-67718129 | MS.gene006081:CDS |
CAATCAGTTCGCTCACCACT+AGG | 0.525126 | 1.3:+67718019 | None:intergenic |
AGATGTTTCTTTGTGGCCTG+GGG | 0.525648 | 1.3:-67716805 | MS.gene006081:CDS |
CTTTCCTGAAAACTGGAGAC+AGG | 0.526319 | 1.3:-67718210 | MS.gene006081:CDS |
ATAACCTTCAGCTGGACTGC+GGG | 0.526602 | 1.3:+67716640 | None:intergenic |
GTTGGATGAAAGCGAAAACC+TGG | 0.526637 | 1.3:+67719215 | None:intergenic |
ACATGTTGCTGGTCAAGGAC+AGG | 0.530141 | 1.3:+67717577 | None:intergenic |
CTAGTGGTGAGCGAACTGAT+TGG | 0.530398 | 1.3:-67718018 | MS.gene006081:CDS |
GAACCATCATAACCTTCAGC+TGG | 0.532336 | 1.3:+67716632 | None:intergenic |
TCATCCAACAGATGAGGAGT+TGG | 0.537248 | 1.3:-67719201 | MS.gene006081:CDS |
ACTTGGATCAGGGAATATCA+TGG | 0.537254 | 1.3:+67717117 | None:intergenic |
CCACTCCGAACATTCAAAGC+GGG | 0.539242 | 1.3:-67716985 | MS.gene006081:CDS |
TCTTCTGATCGAGATGGGTG+CGG | 0.539716 | 1.3:-67719288 | None:intergenic |
GGTGTTGTGTGTGACTCTGT+CGG | 0.542109 | 1.3:-67716270 | MS.gene006081:CDS |
ATCAGCTGCTGAAAATCCCT+TGG | 0.543692 | 1.3:-67716136 | MS.gene006081:CDS |
TATGAAGAGAGCAGGCAGAA+AGG | 0.544360 | 1.3:-67716019 | MS.gene006081:CDS |
ATATACAATTCTCGGTCAGT+TGG | 0.550050 | 1.3:-67718079 | MS.gene006081:CDS |
CATGCATATATGAATAGCAC+TGG | 0.554571 | 1.3:-67716758 | MS.gene006081:CDS |
CTTAAGCTCATCTTCATCCA+TGG | 0.555126 | 1.3:+67717979 | None:intergenic |
ACCGACAACAACATTGCTGC+AGG | 0.564654 | 1.3:-67716060 | MS.gene006081:CDS |
TTTCTTCGTTAATAGACCCC+AGG | 0.566378 | 1.3:+67716789 | None:intergenic |
GCAGCTGATGCAGGAGTGGT+AGG | 0.567625 | 1.3:+67716150 | None:intergenic |
CATTCACATGTTGCTGGTCA+AGG | 0.569092 | 1.3:+67717572 | None:intergenic |
AGTCCAGCTGAAGGTTATGA+TGG | 0.570391 | 1.3:-67716635 | MS.gene006081:CDS |
GGTCATGGATCAATTCTATG+AGG | 0.570510 | 1.3:-67717140 | MS.gene006081:CDS |
TTCAGCAGCTGATGCAGGAG+TGG | 0.571280 | 1.3:+67716146 | None:intergenic |
CTTGACCAGCAACATGTGAA+TGG | 0.574283 | 1.3:-67717571 | MS.gene006081:CDS |
GTGTATTTCTGAAGCACCTG+AGG | 0.574286 | 1.3:-67717014 | MS.gene006081:CDS |
GGAAGTATCCTAACGGTGGA+AGG | 0.576876 | 1.3:-67718159 | MS.gene006081:CDS |
TGTTCACCGTTCTTAGGACC+CGG | 0.583775 | 1.3:+67717781 | None:intergenic |
GCAGCAATGTTGTTGTCGGT+GGG | 0.584407 | 1.3:+67716063 | None:intergenic |
TGAAGAGAGCAGGCAGAAAG+GGG | 0.585879 | 1.3:-67716017 | MS.gene006081:CDS |
TCGCTTTCATCCAACAGATG+AGG | 0.586681 | 1.3:-67719207 | MS.gene006081:CDS |
TTCAAAGCCCGATTTACCAA+GGG | 0.588762 | 1.3:+67716120 | None:intergenic |
TAATGTAAATTCAGTTGACC+GGG | 0.596335 | 1.3:-67717704 | MS.gene006081:CDS |
ATTCAAAGCCCGATTTACCA+AGG | 0.600157 | 1.3:+67716119 | None:intergenic |
CAGCAGCCTCTGGAACCTCC+CGG | 0.601016 | 1.3:+67717686 | None:intergenic |
ACTGCAACTATGAAGAGAGC+AGG | 0.602471 | 1.3:-67716027 | MS.gene006081:CDS |
TGAAAACTGGAGACAGGCAA+TGG | 0.602773 | 1.3:-67718204 | MS.gene006081:CDS |
TTTGGATTTACATATTCAAG+GGG | 0.609182 | 1.3:+67715903 | None:intergenic |
GAAATTTAAGACTATTAGGG+AGG | 0.609647 | 1.3:-67715933 | MS.gene006081:CDS |
CCCGCTTTGAATGTTCGGAG+TGG | 0.613926 | 1.3:+67716985 | None:intergenic |
AGAAACACGAAATATGGTCA+TGG | 0.614827 | 1.3:-67717155 | MS.gene006081:CDS |
AGTTGACCGGGAGGTTCCAG+AGG | 0.618649 | 1.3:-67717692 | MS.gene006081:CDS |
TGGGATCCTGAGGATTTACC+TGG | 0.620679 | 1.3:-67719101 | MS.gene006081:intron |
GTAGATTCTCCTCAGCTCTG+TGG | 0.621558 | 1.3:-67716191 | MS.gene006081:CDS |
TGTAAATTCAGTTGACCGGG+AGG | 0.624909 | 1.3:-67717701 | MS.gene006081:CDS |
CATAACCTTCAGCTGGACTG+CGG | 0.625001 | 1.3:+67716639 | None:intergenic |
AACACCCGCAGTCCAGCTGA+AGG | 0.628590 | 1.3:-67716644 | MS.gene006081:CDS |
TCAATTTCATCATCAAACAA+CGG | 0.629730 | 1.3:+67717631 | None:intergenic |
TTCTGCTGATTGTTTCAGTG+AGG | 0.630580 | 1.3:-67719252 | MS.gene006081:CDS |
AGTGGACCGGGTCCTAAGAA+CGG | 0.632315 | 1.3:-67717787 | MS.gene006081:CDS |
AACAAAGGCCCACAGAGCTG+AGG | 0.632369 | 1.3:+67716182 | None:intergenic |
TCTAGTCGAGCAACTAGACA+TGG | 0.640127 | 1.3:-67718136 | MS.gene006081:CDS |
TATCTTGGCAGAGCTCCTAG+TGG | 0.644063 | 1.3:-67718034 | MS.gene006081:CDS |
TCAACACATCTTCAAACTGG+AGG | 0.645209 | 1.3:+67716855 | None:intergenic |
TGATGATTGAAGTCAAAGCT+GGG | 0.651527 | 1.3:+67717055 | None:intergenic |
CACTCCGAACATTCAAAGCG+GGG | 0.660148 | 1.3:-67716984 | MS.gene006081:CDS |
AAGGTAATACCTTAACATCA+CGG | 0.661498 | 1.3:+67717951 | None:intergenic |
GGAAACTGATGTGTACAAGT+GGG | 0.664415 | 1.3:-67719120 | MS.gene006081:CDS |
GGTAGGTATTGAATCAACAA+AGG | 0.665588 | 1.3:+67716167 | None:intergenic |
AGAGATAGGAAGTATCCTAA+CGG | 0.667183 | 1.3:-67718166 | MS.gene006081:CDS |
GATAGGAAGTATCCTAACGG+TGG | 0.667673 | 1.3:-67718163 | MS.gene006081:CDS |
TCGAATGTCTAGCTTCAGCA+GGG | 0.672244 | 1.3:-67716097 | MS.gene006081:CDS |
GAAGAGAGCAGGCAGAAAGG+GGG | 0.676486 | 1.3:-67716016 | MS.gene006081:CDS |
TCCACTCCGAACATTCAAAG+CGG | 0.683841 | 1.3:-67716986 | MS.gene006081:CDS |
TCCGAACATTCAAAGCGGGG+AGG | 0.705397 | 1.3:-67716981 | MS.gene006081:CDS |
TGTGTACAAGTGGGATCCTG+AGG | 0.709821 | 1.3:-67719111 | MS.gene006081:CDS |
GGTTATGCATGAGTACACCA+TGG | 0.756724 | 1.3:-67717996 | MS.gene006081:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATTTATTTCCTTAAAATAA+TGG | - | chr1.3:67716833-67716852 | MS.gene006081:CDS | 10.0% |
!! | ATTTATTTCCTTAAAATAAT+GGG | - | chr1.3:67716834-67716853 | MS.gene006081:CDS | 10.0% |
!! | AAATTGATGAAATCATTAAA+GGG | - | chr1.3:67717578-67717597 | MS.gene006081:CDS | 15.0% |
!! | TTTGATATAAATTCATTATC+AGG | - | chr1.3:67717351-67717370 | MS.gene006081:intron | 15.0% |
!!! | AAGTTTTTTTTTTTGTCAAA+TGG | + | chr1.3:67717843-67717862 | None:intergenic | 15.0% |
!!! | AGTTTTTTTTTTTGTCAAAT+GGG | + | chr1.3:67717842-67717861 | None:intergenic | 15.0% |
!!! | TTTAAAATTATTGTTTCTGT+TGG | - | chr1.3:67717281-67717300 | MS.gene006081:intron | 15.0% |
!! | ACAAAATTTAAACTCCATAA+AGG | + | chr1.3:67718765-67718784 | None:intergenic | 20.0% |
!! | ATAACCAACAAAAAAAAACT+AGG | + | chr1.3:67716191-67716210 | None:intergenic | 20.0% |
!! | GAAATTGATGAAATCATTAA+AGG | - | chr1.3:67717577-67717596 | MS.gene006081:CDS | 20.0% |
!! | TGTATTTGAAAATGTAGATT+CGG | + | chr1.3:67718289-67718308 | None:intergenic | 20.0% |
!! | TTCATGTTATGACTTATAAT+TGG | - | chr1.3:67716506-67716525 | MS.gene006081:intron | 20.0% |
!!! | ATGTTTTTGGTTTTGTTTAA+TGG | - | chr1.3:67716278-67716297 | MS.gene006081:intron | 20.0% |
!!! | ATTGGAAATTTAAGACTATT+AGG | - | chr1.3:67719256-67719275 | MS.gene006081:CDS | 20.0% |
!!! | CATTTTTCCATGAATAATAT+AGG | - | chr1.3:67718005-67718024 | MS.gene006081:CDS | 20.0% |
!!! | GTTGGTTATATTAATGTTTT+TGG | - | chr1.3:67716234-67716253 | MS.gene006081:CDS | 20.0% |
!!! | TTGGAAATTTAAGACTATTA+GGG | - | chr1.3:67719257-67719276 | MS.gene006081:CDS | 20.0% |
!!! | TTGGTTATGTTTATGATTTT+TGG | - | chr1.3:67716203-67716222 | MS.gene006081:CDS | 20.0% |
!!! | TTTTAGAAAAAAAATACTCC+AGG | + | chr1.3:67717679-67717698 | None:intergenic | 20.0% |
! | AAAAAATAGATAAAGCTGAC+AGG | + | chr1.3:67716648-67716667 | None:intergenic | 25.0% |
! | AAAAACCTTATCGAAACAAA+TGG | + | chr1.3:67716446-67716465 | None:intergenic | 25.0% |
! | AAAAATAGATAAAGCTGACA+GGG | + | chr1.3:67716647-67716666 | None:intergenic | 25.0% |
! | AAAACAGATGATTACATACA+TGG | + | chr1.3:67717773-67717792 | None:intergenic | 25.0% |
! | AAATCAAAATAGTCAGTTGA+AGG | + | chr1.3:67717264-67717283 | None:intergenic | 25.0% |
! | ACCAAAAACTATGACAAATT+AGG | + | chr1.3:67718895-67718914 | None:intergenic | 25.0% |
! | ACCATTTAAAGAAGAAGAAT+GGG | - | chr1.3:67717444-67717463 | MS.gene006081:intron | 25.0% |
! | CAACAACAAAAAAGGAATAA+AGG | + | chr1.3:67717722-67717741 | None:intergenic | 25.0% |
! | CCAAAAACTATGACAAATTA+GGG | + | chr1.3:67718894-67718913 | None:intergenic | 25.0% |
! | CCAAAATATCAAATAAGCAT+AGG | + | chr1.3:67716387-67716406 | None:intergenic | 25.0% |
! | GAAATGTGATATACAATTCT+CGG | - | chr1.3:67717106-67717125 | MS.gene006081:CDS | 25.0% |
! | TCAATTTCATCATCAAACAA+CGG | + | chr1.3:67717565-67717584 | None:intergenic | 25.0% |
! | TGTACATAATATTCACAACA+AGG | + | chr1.3:67716341-67716360 | None:intergenic | 25.0% |
! | TTAATGTAAATTCAGTTGAC+CGG | - | chr1.3:67717488-67717507 | MS.gene006081:intron | 25.0% |
! | TTGAGAACCAAAAATATCTA+CGG | + | chr1.3:67716751-67716770 | None:intergenic | 25.0% |
!! | AAACTTTGCAGCTTTTTATA+AGG | - | chr1.3:67717857-67717876 | MS.gene006081:intron | 25.0% |
!! | AACTTTGCAGCTTTTTATAA+GGG | - | chr1.3:67717858-67717877 | MS.gene006081:intron | 25.0% |
!! | ATAATTGGTGTTTATTCGAT+GGG | - | chr1.3:67716521-67716540 | MS.gene006081:intron | 25.0% |
!! | CCTATGCTTATTTGATATTT+TGG | - | chr1.3:67716384-67716403 | MS.gene006081:intron | 25.0% |
!! | CTTGTATATGTTGGTAAATA+TGG | - | chr1.3:67716793-67716812 | MS.gene006081:CDS | 25.0% |
!! | TATAATTGGTGTTTATTCGA+TGG | - | chr1.3:67716520-67716539 | MS.gene006081:intron | 25.0% |
!! | TGATTTTACTTTCTTCGATT+TGG | - | chr1.3:67718650-67718669 | MS.gene006081:intron | 25.0% |
!! | TTACACTTCTTCATTTCTTT+TGG | - | chr1.3:67716921-67716940 | MS.gene006081:CDS | 25.0% |
!!! | AAGGTTTTTGTGTGTTATTT+GGG | - | chr1.3:67716457-67716476 | MS.gene006081:intron | 25.0% |
!!! | ATATTTTGGATGTGTTTTTC+AGG | - | chr1.3:67716398-67716417 | MS.gene006081:intron | 25.0% |
!!! | ATGTTTTTGGTTTTGTTTGT+TGG | - | chr1.3:67716247-67716266 | MS.gene006081:CDS | 25.0% |
!!! | GGTTTTGTTTAATGGTTATA+AGG | - | chr1.3:67716286-67716305 | MS.gene006081:intron | 25.0% |
!!! | GTCAGCTTTATCTATTTTTT+GGG | - | chr1.3:67716648-67716667 | MS.gene006081:CDS | 25.0% |
!!! | TAAGGTTTTTGTGTGTTATT+TGG | - | chr1.3:67716456-67716475 | MS.gene006081:intron | 25.0% |
!!! | TATTCCTTTTTTGTTGTTGT+GGG | - | chr1.3:67717723-67717742 | MS.gene006081:CDS | 25.0% |
!!! | TCAGCTTTATCTATTTTTTG+GGG | - | chr1.3:67716649-67716668 | MS.gene006081:CDS | 25.0% |
!!! | TCCAAAAACCCATTATTTTA+AGG | + | chr1.3:67716845-67716864 | None:intergenic | 25.0% |
!!! | TCCTTAAAATAATGGGTTTT+TGG | - | chr1.3:67716841-67716860 | MS.gene006081:CDS | 25.0% |
!!! | TGATTTTTGGTTTTGTTTGT+TGG | - | chr1.3:67716216-67716235 | MS.gene006081:CDS | 25.0% |
!!! | TGTCAGCTTTATCTATTTTT+TGG | - | chr1.3:67716647-67716666 | MS.gene006081:CDS | 25.0% |
!!! | TTATTCCTTTTTTGTTGTTG+TGG | - | chr1.3:67717722-67717741 | MS.gene006081:CDS | 25.0% |
!!! | TTGACCTAGTTTTTTTTTGT+TGG | - | chr1.3:67716184-67716203 | MS.gene006081:CDS | 25.0% |
AAGGTAATACCTTAACATCA+CGG | + | chr1.3:67717245-67717264 | None:intergenic | 30.0% | |
ACAAAATGACAATCACCAAT+CGG | + | chr1.3:67716165-67716184 | None:intergenic | 30.0% | |
ACCAATCGGAAAAACATAAA+AGG | + | chr1.3:67716151-67716170 | None:intergenic | 30.0% | |
ATCTGAAAAGGAAGATTTGT+GGG | - | chr1.3:67716024-67716043 | MS.gene006081:CDS | 30.0% | |
CACATAAAGCAATAAGAATC+GGG | + | chr1.3:67719219-67719238 | None:intergenic | 30.0% | |
CACCATTTAAAGAAGAAGAA+TGG | - | chr1.3:67717443-67717462 | MS.gene006081:intron | 30.0% | |
GAGATCAAAACTACAAAAAC+AGG | + | chr1.3:67717801-67717820 | None:intergenic | 30.0% | |
GCACATAAAGCAATAAGAAT+CGG | + | chr1.3:67719220-67719239 | None:intergenic | 30.0% | |
TAATGTAAATTCAGTTGACC+GGG | - | chr1.3:67717489-67717508 | MS.gene006081:intron | 30.0% | |
TATCTGAAAAGGAAGATTTG+TGG | - | chr1.3:67716023-67716042 | MS.gene006081:CDS | 30.0% | |
TCAGCAACCTATATTATTCA+TGG | + | chr1.3:67718015-67718034 | None:intergenic | 30.0% | |
TGATGAAGAAACACGAAATA+TGG | - | chr1.3:67718032-67718051 | MS.gene006081:CDS | 30.0% | |
TTCTGCTTAGAAAATGTCAT+AGG | - | chr1.3:67718864-67718883 | MS.gene006081:intron | 30.0% | |
! | ACCTTTTATGTTTTTCCGAT+TGG | - | chr1.3:67716147-67716166 | MS.gene006081:CDS | 30.0% |
! | ATCAAACTGTTGATGAATTC+TGG | - | chr1.3:67718511-67718530 | MS.gene006081:intron | 30.0% |
! | GAAATTTAAGACTATTAGGG+AGG | - | chr1.3:67719260-67719279 | MS.gene006081:CDS | 30.0% |
! | GTTGGTTATGTTCATGTTTT+TGG | - | chr1.3:67716265-67716284 | MS.gene006081:CDS | 30.0% |
! | TCTTTTTCTGTCATAGAGAT+AGG | - | chr1.3:67717013-67717032 | MS.gene006081:CDS | 30.0% |
! | TGGTGATGTATTATCTGAAA+AGG | - | chr1.3:67716012-67716031 | MS.gene006081:CDS | 30.0% |
!! | AAGACACTTGTTTTCTATCT+TGG | - | chr1.3:67717144-67717163 | MS.gene006081:CDS | 30.0% |
!! | ATGGTTATAAGGTGTTGATT+TGG | - | chr1.3:67716297-67716316 | MS.gene006081:intron | 30.0% |
!! | CCCTAATTTGTCATAGTTTT+TGG | - | chr1.3:67718891-67718910 | MS.gene006081:intron | 30.0% |
!! | TACAAGGTTTTCAAGAAAAG+TGG | - | chr1.3:67717388-67717407 | MS.gene006081:intron | 30.0% |
!! | TGGTTATAAGGTGTTGATTT+GGG | - | chr1.3:67716298-67716317 | MS.gene006081:intron | 30.0% |
!! | TTTACTTTCTTCGATTTGGA+TGG | - | chr1.3:67718654-67718673 | MS.gene006081:intron | 30.0% |
!!! | CATAGTTTTTGGTCATGTTT+AGG | - | chr1.3:67718902-67718921 | MS.gene006081:intron | 30.0% |
AAAGAAACATCTCTGCATCT+TGG | + | chr1.3:67718380-67718399 | None:intergenic | 35.0% | |
ACAAATCCAGGTATAGTCAT+TGG | - | chr1.3:67718594-67718613 | MS.gene006081:intron | 35.0% | |
AGAAACACGAAATATGGTCA+TGG | - | chr1.3:67718038-67718057 | MS.gene006081:CDS | 35.0% | |
AGAAGAACAATACTACGATC+AGG | + | chr1.3:67717929-67717948 | None:intergenic | 35.0% | |
ATATACAATTCTCGGTCAGT+TGG | - | chr1.3:67717114-67717133 | MS.gene006081:CDS | 35.0% | |
CAATAAGAATCGGGAAGAAA+AGG | + | chr1.3:67719210-67719229 | None:intergenic | 35.0% | |
CATGCATATATGAATAGCAC+TGG | - | chr1.3:67718435-67718454 | MS.gene006081:intron | 35.0% | |
CTGAAAATCCCTTGGTAAAT+CGG | - | chr1.3:67719065-67719084 | MS.gene006081:intron | 35.0% | |
GAACAATCTTTCCTGAAAAC+TGG | - | chr1.3:67716976-67716995 | MS.gene006081:CDS | 35.0% | |
GAAGAGCAAAATCAAATACC+AGG | + | chr1.3:67716113-67716132 | None:intergenic | 35.0% | |
GACTTCCATTTGTTTCGATA+AGG | - | chr1.3:67716438-67716457 | MS.gene006081:intron | 35.0% | |
GATGATCTGCTTGTATATGT+TGG | - | chr1.3:67716784-67716803 | MS.gene006081:CDS | 35.0% | |
GCCCATTCTTCTTCTTTAAA+TGG | + | chr1.3:67717448-67717467 | None:intergenic | 35.0% | |
GGACTATTATGCACTTTACA+AGG | - | chr1.3:67717372-67717391 | MS.gene006081:intron | 35.0% | |
GTTGAAGTTCAACGTTATCA+AGG | - | chr1.3:67716052-67716071 | MS.gene006081:CDS | 35.0% | |
TATGAGAGAAGACCAATAGA+AGG | + | chr1.3:67717962-67717981 | None:intergenic | 35.0% | |
TCTTTCTCTCTAACAAATCC+AGG | - | chr1.3:67718582-67718601 | MS.gene006081:intron | 35.0% | |
TGAAAATCCCTTGGTAAATC+GGG | - | chr1.3:67719066-67719085 | MS.gene006081:intron | 35.0% | |
TGATGATTGAAGTCAAAGCT+GGG | + | chr1.3:67718141-67718160 | None:intergenic | 35.0% | |
TGCTTTATGTGCTTTCTTGT+GGG | - | chr1.3:67719228-67719247 | MS.gene006081:CDS | 35.0% | |
TGTACAGTACTTAGCAATTC+AGG | - | chr1.3:67716355-67716374 | MS.gene006081:intron | 35.0% | |
TTGCTTTATGTGCTTTCTTG+TGG | - | chr1.3:67719227-67719246 | MS.gene006081:CDS | 35.0% | |
! | GATAGGTCCGTAGATATTTT+TGG | - | chr1.3:67716741-67716760 | MS.gene006081:CDS | 35.0% |
! | GCAGCTTTTTATAAGGGTTT+TGG | - | chr1.3:67717864-67717883 | MS.gene006081:intron | 35.0% |
! | TGATTTTCAGTGCTTTCAGT+AGG | + | chr1.3:67718953-67718972 | None:intergenic | 35.0% |
! | TTGAGATCTCTTGGTTGATA+TGG | - | chr1.3:67716676-67716695 | MS.gene006081:CDS | 35.0% |
! | TTGATGATTGAAGTCAAAGC+TGG | + | chr1.3:67718142-67718161 | None:intergenic | 35.0% |
!! | AGAGATAGGAAGTATCCTAA+CGG | - | chr1.3:67717027-67717046 | MS.gene006081:CDS | 35.0% |
!! | GGTAGGTATTGAATCAACAA+AGG | + | chr1.3:67719029-67719048 | None:intergenic | 35.0% |
!! | GTTTTTGAGCCAATTTCAAG+TGG | - | chr1.3:67718838-67718857 | MS.gene006081:intron | 35.0% |
!!! | CTAGATTGCTGTTTTTCACT+TGG | + | chr1.3:67718096-67718115 | None:intergenic | 35.0% |
!!! | CTCTCTTGTTTTCCTTCTAT+TGG | - | chr1.3:67717947-67717966 | MS.gene006081:intron | 35.0% |
!!! | CTTTTTTGTTGTTGTGGGTA+GGG | - | chr1.3:67717728-67717747 | MS.gene006081:CDS | 35.0% |
!!! | TTTTTTGTTGTTGTGGGTAG+GGG | - | chr1.3:67717729-67717748 | MS.gene006081:CDS | 35.0% |
AACATCTCTGCATCTTGGTA+AGG | + | chr1.3:67718375-67718394 | None:intergenic | 40.0% | |
AACTCGTACAAACAGATTCG+CGG | + | chr1.3:67716552-67716571 | None:intergenic | 40.0% | |
AAGCTACAATGTTGCTCAAC+TGG | - | chr1.3:67718620-67718639 | MS.gene006081:intron | 40.0% | |
ACTTGGATCAGGGAATATCA+TGG | + | chr1.3:67718079-67718098 | None:intergenic | 40.0% | |
AGGAAACTGATGTGTACAAG+TGG | - | chr1.3:67716072-67716091 | MS.gene006081:CDS | 40.0% | |
AGTTTCCTTCAGTGCATGAT+AGG | - | chr1.3:67716724-67716743 | MS.gene006081:CDS | 40.0% | |
ATTCAAAGCCCGATTTACCA+AGG | + | chr1.3:67719077-67719096 | None:intergenic | 40.0% | |
CAAATACCAGGTAAATCCTC+AGG | + | chr1.3:67716101-67716120 | None:intergenic | 40.0% | |
CAAATGGAAGTCAACTCTTG+AGG | + | chr1.3:67716430-67716449 | None:intergenic | 40.0% | |
CACTCAACACATCTTCAAAC+TGG | + | chr1.3:67718344-67718363 | None:intergenic | 40.0% | |
CATAACCATTCACATGTTGC+TGG | + | chr1.3:67717630-67717649 | None:intergenic | 40.0% | |
CATGGAAAAATGTCTGTCAG+CGG | + | chr1.3:67717997-67718016 | None:intergenic | 40.0% | |
CCTACCCACAACAACAAAAA+AGG | + | chr1.3:67717730-67717749 | None:intergenic | 40.0% | |
CTTAAGCTCATCTTCATCCA+TGG | + | chr1.3:67717217-67717236 | None:intergenic | 40.0% | |
GATGCAGAGATGTTTCTTTG+TGG | - | chr1.3:67718381-67718400 | MS.gene006081:intron | 40.0% | |
GCTTTCTTGTGGGTTTCTAT+TGG | - | chr1.3:67719238-67719257 | MS.gene006081:CDS | 40.0% | |
GGAAACTGATGTGTACAAGT+GGG | - | chr1.3:67716073-67716092 | MS.gene006081:CDS | 40.0% | |
GGTCATGGATCAATTCTATG+AGG | - | chr1.3:67718053-67718072 | MS.gene006081:CDS | 40.0% | |
TAAGACATGCCGTGATGTTA+AGG | - | chr1.3:67717233-67717252 | MS.gene006081:intron | 40.0% | |
TCAACACATCTTCAAACTGG+AGG | + | chr1.3:67718341-67718360 | None:intergenic | 40.0% | |
TGGTGATCAGTCTTACATCT+AGG | + | chr1.3:67716595-67716614 | None:intergenic | 40.0% | |
TTCAAAGCCCGATTTACCAA+GGG | + | chr1.3:67719076-67719095 | None:intergenic | 40.0% | |
TTTCTTCGTTAATAGACCCC+AGG | + | chr1.3:67718407-67718426 | None:intergenic | 40.0% | |
! | ATTGGTGTTTATTCGATGGG+TGG | - | chr1.3:67716524-67716543 | MS.gene006081:intron | 40.0% |
! | TTCTGCTGATTGTTTCAGTG+AGG | - | chr1.3:67715941-67715960 | MS.gene006081:CDS | 40.0% |
!! | ACAGTTTGATTTGCGTCTTC+TGG | + | chr1.3:67718501-67718520 | None:intergenic | 40.0% |
!! | GGTTTTCAAGAAAAGTGGAC+CGG | - | chr1.3:67717393-67717412 | MS.gene006081:intron | 40.0% |
!! | GTTTTCAAGAAAAGTGGACC+GGG | - | chr1.3:67717394-67717413 | MS.gene006081:intron | 40.0% |
!! | TGGTTATGTTGACTTTCCTC+AGG | - | chr1.3:67717642-67717661 | MS.gene006081:CDS | 40.0% |
!! | TTGATTTGCGTCTTCTGGAT+TGG | + | chr1.3:67718496-67718515 | None:intergenic | 40.0% |
!!! | CCTTTTTTGTTGTTGTGGGT+AGG | - | chr1.3:67717727-67717746 | MS.gene006081:CDS | 40.0% |
!!! | GCTGTTTTTCACTTGGATCA+GGG | + | chr1.3:67718089-67718108 | None:intergenic | 40.0% |
!!! | TGCTGTTTTTCACTTGGATC+AGG | + | chr1.3:67718090-67718109 | None:intergenic | 40.0% |
!!! | TTTTTGTTGTTGTGGGTAGG+GGG | - | chr1.3:67717730-67717749 | MS.gene006081:CDS | 40.0% |
ACCTGCAGCAATGTTGTTGT+CGG | + | chr1.3:67719137-67719156 | None:intergenic | 45.0% | |
ACTGCAACTATGAAGAGAGC+AGG | - | chr1.3:67719166-67719185 | MS.gene006081:CDS | 45.0% | |
AGAGATGTTTCTTTGTGGCC+TGG | - | chr1.3:67718386-67718405 | MS.gene006081:intron | 45.0% | |
AGATGTTTCTTTGTGGCCTG+GGG | - | chr1.3:67718388-67718407 | MS.gene006081:intron | 45.0% | |
AGTCCAGCTGAAGGTTATGA+TGG | - | chr1.3:67718558-67718577 | MS.gene006081:intron | 45.0% | |
ATCACCAACTCCTCATCTGT+TGG | + | chr1.3:67715999-67716018 | None:intergenic | 45.0% | |
ATCAGCTGCTGAAAATCCCT+TGG | - | chr1.3:67719057-67719076 | MS.gene006081:intron | 45.0% | |
ATGAAGAGAGCAGGCAGAAA+GGG | - | chr1.3:67719175-67719194 | MS.gene006081:CDS | 45.0% | |
CATTCACATGTTGCTGGTCA+AGG | + | chr1.3:67717624-67717643 | None:intergenic | 45.0% | |
CCATACTGTTCACCGTTCTT+AGG | + | chr1.3:67717421-67717440 | None:intergenic | 45.0% | |
CCTAAGAACGGTGAACAGTA+TGG | - | chr1.3:67717418-67717437 | MS.gene006081:intron | 45.0% | |
CTTGACCAGCAACATGTGAA+TGG | - | chr1.3:67717622-67717641 | MS.gene006081:CDS | 45.0% | |
CTTGTGCCAATGACTATACC+TGG | + | chr1.3:67718603-67718622 | None:intergenic | 45.0% | |
CTTTCCTGAAAACTGGAGAC+AGG | - | chr1.3:67716983-67717002 | MS.gene006081:CDS | 45.0% | |
GAACCATCATAACCTTCAGC+TGG | + | chr1.3:67718564-67718583 | None:intergenic | 45.0% | |
GAGATGTTTCTTTGTGGCCT+GGG | - | chr1.3:67718387-67718406 | MS.gene006081:intron | 45.0% | |
GAGCTCAGCAGAAATGAGAT+GGG | + | chr1.3:67718692-67718711 | None:intergenic | 45.0% | |
GCAGAAGAGCCACTTGAAAT+TGG | + | chr1.3:67718850-67718869 | None:intergenic | 45.0% | |
GGTTATGCATGAGTACACCA+TGG | - | chr1.3:67717197-67717216 | MS.gene006081:intron | 45.0% | |
GTTGGATGAAAGCGAAAACC+TGG | + | chr1.3:67715981-67716000 | None:intergenic | 45.0% | |
TAGATTCTCCTCAGCTCTGT+GGG | - | chr1.3:67719003-67719022 | MS.gene006081:intron | 45.0% | |
TAGTGGTGAGCGAACTGATT+GGG | - | chr1.3:67717176-67717195 | MS.gene006081:intron | 45.0% | |
TATGAAGAGAGCAGGCAGAA+AGG | - | chr1.3:67719174-67719193 | MS.gene006081:CDS | 45.0% | |
TCATCCAACAGATGAGGAGT+TGG | - | chr1.3:67715992-67716011 | MS.gene006081:CDS | 45.0% | |
TCCACTCCGAACATTCAAAG+CGG | - | chr1.3:67718207-67718226 | MS.gene006081:CDS | 45.0% | |
TCGCTTTCATCCAACAGATG+AGG | - | chr1.3:67715986-67716005 | MS.gene006081:CDS | 45.0% | |
TCTAGTCGAGCAACTAGACA+TGG | - | chr1.3:67717057-67717076 | MS.gene006081:CDS | 45.0% | |
TGAAAACTGGAGACAGGCAA+TGG | - | chr1.3:67716989-67717008 | MS.gene006081:CDS | 45.0% | |
TGGGGTATGTTGAGATCTCT+TGG | - | chr1.3:67716667-67716686 | MS.gene006081:CDS | 45.0% | |
TGTAAATTCAGTTGACCGGG+AGG | - | chr1.3:67717492-67717511 | MS.gene006081:intron | 45.0% | |
! | ATCGAATGTCTAGCTTCAGC+AGG | - | chr1.3:67719095-67719114 | MS.gene006081:intron | 45.0% |
! | ATTGCCTGTCTCCAGTTTTC+AGG | + | chr1.3:67716990-67717009 | None:intergenic | 45.0% |
! | CTCTTGGTTGATATGGTCAG+TGG | - | chr1.3:67716683-67716702 | MS.gene006081:CDS | 45.0% |
! | CTTCTGGATTGGACAACAAC+TGG | + | chr1.3:67718485-67718504 | None:intergenic | 45.0% |
! | CTTTTACGAGGAAGGCTTCT+TGG | - | chr1.3:67718242-67718261 | MS.gene006081:intron | 45.0% |
! | GAGCTTGTCTTTTACGAGGA+AGG | - | chr1.3:67718234-67718253 | MS.gene006081:intron | 45.0% |
! | TCGAATGTCTAGCTTCAGCA+GGG | - | chr1.3:67719096-67719115 | MS.gene006081:intron | 45.0% |
!! | GATAGGAAGTATCCTAACGG+TGG | - | chr1.3:67717030-67717049 | MS.gene006081:CDS | 45.0% |
!! | GTGTATTTCTGAAGCACCTG+AGG | - | chr1.3:67718179-67718198 | MS.gene006081:CDS | 45.0% |
AATGAACCCCACAAAGGGGA+GGG | + | chr1.3:67716622-67716641 | None:intergenic | 50.0% | |
ACATGTTGCTGGTCAAGGAC+AGG | + | chr1.3:67717619-67717638 | None:intergenic | 50.0% | |
ACATTGTCAACAGCAGCCTC+TGG | + | chr1.3:67717520-67717539 | None:intergenic | 50.0% | |
ACCGACAACAACATTGCTGC+AGG | - | chr1.3:67719133-67719152 | MS.gene006081:CDS | 50.0% | |
ACGGACCTATCATGCACTGA+AGG | + | chr1.3:67716732-67716751 | None:intergenic | 50.0% | |
AGGGTCAATGAACCCCACAA+AGG | + | chr1.3:67716628-67716647 | None:intergenic | 50.0% | |
ATAACCTTCAGCTGGACTGC+GGG | + | chr1.3:67718556-67718575 | None:intergenic | 50.0% | |
CAATCAGTTCGCTCACCACT+AGG | + | chr1.3:67717177-67717196 | None:intergenic | 50.0% | |
CACTCCGAACATTCAAAGCG+GGG | - | chr1.3:67718209-67718228 | MS.gene006081:CDS | 50.0% | |
CATAACCTTCAGCTGGACTG+CGG | + | chr1.3:67718557-67718576 | None:intergenic | 50.0% | |
CATGGCTACTGGAAAGCTAC+TGG | - | chr1.3:67717075-67717094 | MS.gene006081:CDS | 50.0% | |
CCACTCCGAACATTCAAAGC+GGG | - | chr1.3:67718208-67718227 | MS.gene006081:CDS | 50.0% | |
CGAGCTCAGCAGAAATGAGA+TGG | + | chr1.3:67718693-67718712 | None:intergenic | 50.0% | |
CTAGTGGTGAGCGAACTGAT+TGG | - | chr1.3:67717175-67717194 | MS.gene006081:intron | 50.0% | |
GAGCAACTAGACATGGCTAC+TGG | - | chr1.3:67717064-67717083 | MS.gene006081:CDS | 50.0% | |
GCAGCAATGTTGTTGTCGGT+GGG | + | chr1.3:67719133-67719152 | None:intergenic | 50.0% | |
GGGTCAATGAACCCCACAAA+GGG | + | chr1.3:67716627-67716646 | None:intergenic | 50.0% | |
GGTCAATGAACCCCACAAAG+GGG | + | chr1.3:67716626-67716645 | None:intergenic | 50.0% | |
GTAGATTCTCCTCAGCTCTG+TGG | - | chr1.3:67719002-67719021 | MS.gene006081:intron | 50.0% | |
TATCTTGGCAGAGCTCCTAG+TGG | - | chr1.3:67717159-67717178 | MS.gene006081:CDS | 50.0% | |
TCGTCACAGTTTACTGCTCC+TGG | - | chr1.3:67718710-67718729 | MS.gene006081:intron | 50.0% | |
TGAAGAGAGCAGGCAGAAAG+GGG | - | chr1.3:67719176-67719195 | MS.gene006081:CDS | 50.0% | |
TGCAGCAATGTTGTTGTCGG+TGG | + | chr1.3:67719134-67719153 | None:intergenic | 50.0% | |
TGGGATCCTGAGGATTTACC+TGG | - | chr1.3:67716092-67716111 | MS.gene006081:CDS | 50.0% | |
TGTGTACAAGTGGGATCCTG+AGG | - | chr1.3:67716082-67716101 | MS.gene006081:CDS | 50.0% | |
TGTTCACCGTTCTTAGGACC+CGG | + | chr1.3:67717415-67717434 | None:intergenic | 50.0% | |
! | GGAGGAGCTTGTCTTTTACG+AGG | - | chr1.3:67718230-67718249 | MS.gene006081:intron | 50.0% |
! | GGATTTTCAGCAGCTGATGC+AGG | + | chr1.3:67719055-67719074 | None:intergenic | 50.0% |
! | GGTGTTGTGTGTGACTCTGT+CGG | - | chr1.3:67718923-67718942 | MS.gene006081:intron | 50.0% |
! | TCCTCCCCGCTTTGAATGTT+CGG | + | chr1.3:67718216-67718235 | None:intergenic | 50.0% |
!! | GGAAGTATCCTAACGGTGGA+AGG | - | chr1.3:67717034-67717053 | MS.gene006081:CDS | 50.0% |
AACAAAGGCCCACAGAGCTG+AGG | + | chr1.3:67719014-67719033 | None:intergenic | 55.0% | |
AGTGGACCGGGTCCTAAGAA+CGG | - | chr1.3:67717406-67717425 | MS.gene006081:intron | 55.0% | |
ATGAACCCCACAAAGGGGAG+GGG | + | chr1.3:67716621-67716640 | None:intergenic | 55.0% | |
CAATGAACCCCACAAAGGGG+AGG | + | chr1.3:67716623-67716642 | None:intergenic | 55.0% | |
CGACTAGACCTTCCACCGTT+AGG | + | chr1.3:67717045-67717064 | None:intergenic | 55.0% | |
GAAGAGAGCAGGCAGAAAGG+GGG | - | chr1.3:67719177-67719196 | MS.gene006081:CDS | 55.0% | |
GCGCGTGGCAGAAACCTTTA+TGG | - | chr1.3:67718748-67718767 | MS.gene006081:intron | 55.0% | |
TCCGAACATTCAAAGCGGGG+AGG | - | chr1.3:67718212-67718231 | MS.gene006081:CDS | 55.0% | |
TTCAGCAGCTGATGCAGGAG+TGG | + | chr1.3:67719050-67719069 | None:intergenic | 55.0% | |
TTCGGAGTGGAAGTGACCTC+AGG | + | chr1.3:67718198-67718217 | None:intergenic | 55.0% | |
! | CCCGCTTTGAATGTTCGGAG+TGG | + | chr1.3:67718211-67718230 | None:intergenic | 55.0% |
! | TTGTTGTTGTGGGTAGGGGG+AGG | - | chr1.3:67717733-67717752 | MS.gene006081:CDS | 55.0% |
AACACCCGCAGTCCAGCTGA+AGG | - | chr1.3:67718549-67718568 | MS.gene006081:intron | 60.0% | |
ACCAGTTCCCCTCCCCTTTG+TGG | - | chr1.3:67716611-67716630 | MS.gene006081:intron | 60.0% | |
AGTTGACCGGGAGGTTCCAG+AGG | - | chr1.3:67717501-67717520 | MS.gene006081:intron | 60.0% | |
CAGTTCCCCTCCCCTTTGTG+GGG | - | chr1.3:67716613-67716632 | MS.gene006081:CDS | 60.0% | |
CCAGGCAGATCACACACCTG+AGG | + | chr1.3:67717661-67717680 | None:intergenic | 60.0% | |
CCAGTTCCCCTCCCCTTTGT+GGG | - | chr1.3:67716612-67716631 | MS.gene006081:CDS | 60.0% | |
CCTCAGGTGTGTGATCTGCC+TGG | - | chr1.3:67717658-67717677 | MS.gene006081:CDS | 60.0% | |
GAGGTGATGTCGTCGATGCC+AGG | - | chr1.3:67715960-67715979 | MS.gene006081:CDS | 60.0% | |
GCAGCTGATGCAGGAGTGGT+AGG | + | chr1.3:67719046-67719065 | None:intergenic | 60.0% | |
GGTTTCTGCCACGCGCAAGT+TGG | + | chr1.3:67718744-67718763 | None:intergenic | 60.0% | |
TTGACACGCCAACTTGCGCG+TGG | - | chr1.3:67718733-67718752 | MS.gene006081:intron | 60.0% | |
! | CGCAAGTTGGCGTGTCAACC+AGG | + | chr1.3:67718731-67718750 | None:intergenic | 60.0% |
CCCACAAAGGGGAGGGGAAC+TGG | + | chr1.3:67716615-67716634 | None:intergenic | 65.0% | |
!! | CAGCAGCCTCTGGAACCTCC+CGG | + | chr1.3:67717510-67717529 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.3 | gene | 67715918 | 67719297 | 67715918 | ID=MS.gene006081 |
chr1.3 | mRNA | 67715918 | 67719297 | 67715918 | ID=MS.gene006081.t1;Parent=MS.gene006081 |
chr1.3 | exon | 67719102 | 67719297 | 67719102 | ID=MS.gene006081.t1.exon1;Parent=MS.gene006081.t1 |
chr1.3 | CDS | 67719102 | 67719297 | 67719102 | ID=cds.MS.gene006081.t1;Parent=MS.gene006081.t1 |
chr1.3 | exon | 67717961 | 67718238 | 67717961 | ID=MS.gene006081.t1.exon2;Parent=MS.gene006081.t1 |
chr1.3 | CDS | 67717961 | 67718238 | 67717961 | ID=cds.MS.gene006081.t1;Parent=MS.gene006081.t1 |
chr1.3 | exon | 67717552 | 67717842 | 67717552 | ID=MS.gene006081.t1.exon3;Parent=MS.gene006081.t1 |
chr1.3 | CDS | 67717552 | 67717842 | 67717552 | ID=cds.MS.gene006081.t1;Parent=MS.gene006081.t1 |
chr1.3 | exon | 67716612 | 67717188 | 67716612 | ID=MS.gene006081.t1.exon4;Parent=MS.gene006081.t1 |
chr1.3 | CDS | 67716612 | 67717188 | 67716612 | ID=cds.MS.gene006081.t1;Parent=MS.gene006081.t1 |
chr1.3 | exon | 67715918 | 67716291 | 67715918 | ID=MS.gene006081.t1.exon5;Parent=MS.gene006081.t1 |
chr1.3 | CDS | 67715918 | 67716291 | 67715918 | ID=cds.MS.gene006081.t1;Parent=MS.gene006081.t1 |
Gene Sequence |
Protein sequence |