Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene006220.t1 | AES62434.1 | 88.5 | 312 | 35 | 1 | 1 | 311 | 1 | 312 | 3.20E-126 | 461.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene006220.t1 | Q9FLX8 | 70.2 | 104 | 31 | 0 | 172 | 275 | 153 | 256 | 5.3e-37 | 156.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene006220.t1 | G7IDY1 | 88.5 | 312 | 35 | 1 | 1 | 311 | 1 | 312 | 2.3e-126 | 461.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene006220.t1 | TF | WRKY |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene006220.t1 | MTR_1g099600 | 94.872 | 312 | 15 | 1 | 1 | 311 | 1 | 312 | 0.0 | 516 |
MS.gene006220.t1 | MTR_8g028565 | 67.544 | 114 | 34 | 2 | 160 | 271 | 132 | 244 | 5.80e-46 | 159 |
MS.gene006220.t1 | MTR_2g032030 | 55.738 | 122 | 40 | 2 | 164 | 276 | 238 | 354 | 5.49e-38 | 139 |
MS.gene006220.t1 | MTR_2g032030 | 55.738 | 122 | 40 | 2 | 164 | 276 | 238 | 354 | 1.79e-37 | 139 |
MS.gene006220.t1 | MTR_8g098945 | 44.809 | 183 | 84 | 7 | 137 | 311 | 84 | 257 | 2.26e-35 | 129 |
MS.gene006220.t1 | MTR_2g024380 | 50.420 | 119 | 55 | 3 | 163 | 277 | 229 | 347 | 6.75e-32 | 124 |
MS.gene006220.t1 | MTR_7g109600 | 40.260 | 154 | 70 | 2 | 147 | 292 | 8 | 147 | 7.41e-32 | 119 |
MS.gene006220.t1 | MTR_8g069935 | 38.012 | 171 | 87 | 5 | 116 | 275 | 254 | 416 | 9.37e-30 | 117 |
MS.gene006220.t1 | MTR_2g024350 | 50.495 | 101 | 47 | 2 | 180 | 277 | 4 | 104 | 1.07e-28 | 110 |
MS.gene006220.t1 | MTR_8g067635 | 53.061 | 98 | 44 | 2 | 159 | 254 | 323 | 420 | 3.21e-28 | 114 |
MS.gene006220.t1 | MTR_8g087000 | 42.446 | 139 | 65 | 3 | 123 | 259 | 26 | 151 | 8.56e-28 | 108 |
MS.gene006220.t1 | MTR_8g087000 | 42.143 | 140 | 65 | 3 | 123 | 259 | 26 | 152 | 1.11e-27 | 108 |
MS.gene006220.t1 | MTR_8g067650 | 53.684 | 95 | 42 | 2 | 162 | 254 | 316 | 410 | 1.23e-27 | 112 |
MS.gene006220.t1 | MTR_2g016770 | 56.522 | 92 | 33 | 2 | 163 | 248 | 9 | 99 | 2.80e-27 | 106 |
MS.gene006220.t1 | MTR_2g016770 | 70.769 | 65 | 19 | 0 | 184 | 248 | 27 | 91 | 3.54e-27 | 105 |
MS.gene006220.t1 | MTR_6g053200 | 46.154 | 117 | 59 | 3 | 133 | 247 | 279 | 393 | 1.72e-26 | 109 |
MS.gene006220.t1 | MTR_5g016610 | 58.824 | 85 | 29 | 2 | 163 | 242 | 174 | 257 | 1.01e-25 | 103 |
MS.gene006220.t1 | MTR_4g094908 | 54.118 | 85 | 34 | 1 | 163 | 242 | 240 | 324 | 9.45e-25 | 102 |
MS.gene006220.t1 | MTR_2g083870 | 52.747 | 91 | 33 | 1 | 164 | 244 | 50 | 140 | 1.13e-24 | 100 |
MS.gene006220.t1 | MTR_1g070455 | 67.797 | 59 | 19 | 0 | 185 | 243 | 294 | 352 | 5.34e-23 | 97.8 |
MS.gene006220.t1 | MTR_4g127040 | 51.807 | 83 | 35 | 1 | 165 | 242 | 221 | 303 | 1.05e-22 | 96.3 |
MS.gene006220.t1 | MTR_1g009613 | 48.750 | 80 | 40 | 1 | 162 | 241 | 241 | 319 | 1.89e-21 | 93.2 |
MS.gene006220.t1 | MTR_0117s0040 | 37.931 | 116 | 67 | 3 | 129 | 241 | 18 | 131 | 5.05e-20 | 87.8 |
MS.gene006220.t1 | MTR_7g011820 | 45.652 | 92 | 49 | 1 | 158 | 249 | 384 | 474 | 1.21e-19 | 89.4 |
MS.gene006220.t1 | MTR_7g011820 | 43.077 | 65 | 35 | 2 | 180 | 244 | 224 | 286 | 1.44e-11 | 65.5 |
MS.gene006220.t1 | MTR_4g130900 | 45.783 | 83 | 43 | 2 | 166 | 247 | 340 | 421 | 8.41e-19 | 87.0 |
MS.gene006220.t1 | MTR_3g108960 | 44.578 | 83 | 45 | 1 | 159 | 241 | 290 | 371 | 9.80e-19 | 86.3 |
MS.gene006220.t1 | MTR_7g080020 | 44.048 | 84 | 45 | 2 | 166 | 248 | 474 | 556 | 1.74e-17 | 83.6 |
MS.gene006220.t1 | MTR_7g080020 | 45.205 | 73 | 38 | 2 | 172 | 244 | 268 | 338 | 1.44e-14 | 74.7 |
MS.gene006220.t1 | MTR_3g053330 | 38.835 | 103 | 61 | 1 | 181 | 281 | 248 | 350 | 4.52e-17 | 81.6 |
MS.gene006220.t1 | MTR_7g062220 | 51.429 | 70 | 31 | 2 | 172 | 241 | 114 | 180 | 1.48e-16 | 79.0 |
MS.gene006220.t1 | MTR_4g082580 | 45.455 | 77 | 40 | 2 | 172 | 247 | 265 | 340 | 3.14e-16 | 79.0 |
MS.gene006220.t1 | MTR_4g082580 | 41.176 | 68 | 39 | 1 | 177 | 244 | 138 | 204 | 1.19e-11 | 65.1 |
MS.gene006220.t1 | MTR_5g042920 | 44.156 | 77 | 41 | 2 | 172 | 247 | 307 | 382 | 3.88e-16 | 79.0 |
MS.gene006220.t1 | MTR_5g042920 | 42.647 | 68 | 37 | 2 | 177 | 244 | 144 | 209 | 2.01e-11 | 64.7 |
MS.gene006220.t1 | MTR_7g110720 | 46.575 | 73 | 39 | 0 | 182 | 254 | 187 | 259 | 4.38e-16 | 78.6 |
MS.gene006220.t1 | MTR_2g045360 | 43.678 | 87 | 49 | 0 | 184 | 270 | 211 | 297 | 4.57e-16 | 78.6 |
MS.gene006220.t1 | MTR_7g110720 | 46.575 | 73 | 39 | 0 | 182 | 254 | 214 | 286 | 4.86e-16 | 78.6 |
MS.gene006220.t1 | MTR_5g097490 | 40.217 | 92 | 53 | 2 | 170 | 260 | 237 | 327 | 5.84e-16 | 78.2 |
MS.gene006220.t1 | MTR_5g097490 | 39.080 | 87 | 51 | 2 | 158 | 244 | 66 | 150 | 9.91e-12 | 65.5 |
MS.gene006220.t1 | MTR_7g100510 | 44.737 | 76 | 40 | 2 | 179 | 254 | 184 | 257 | 6.72e-16 | 78.2 |
MS.gene006220.t1 | MTR_7g100510 | 40.816 | 98 | 42 | 3 | 162 | 244 | 324 | 420 | 2.37e-15 | 76.6 |
MS.gene006220.t1 | MTR_3g009470 | 42.353 | 85 | 47 | 2 | 166 | 249 | 476 | 559 | 7.61e-16 | 78.6 |
MS.gene006220.t1 | MTR_3g009470 | 49.315 | 73 | 34 | 3 | 183 | 254 | 279 | 349 | 4.33e-13 | 70.1 |
MS.gene006220.t1 | MTR_7g080000 | 41.667 | 84 | 47 | 2 | 165 | 247 | 412 | 494 | 1.10e-15 | 77.8 |
MS.gene006220.t1 | MTR_7g080000 | 45.205 | 73 | 38 | 2 | 172 | 244 | 222 | 292 | 4.31e-15 | 76.3 |
MS.gene006220.t1 | MTR_1g086790 | 49.275 | 69 | 33 | 2 | 185 | 252 | 159 | 226 | 1.64e-15 | 76.3 |
MS.gene006220.t1 | MTR_4g013260 | 42.169 | 83 | 46 | 2 | 166 | 247 | 317 | 398 | 2.29e-15 | 76.6 |
MS.gene006220.t1 | MTR_4g013260 | 32.000 | 125 | 69 | 2 | 185 | 309 | 185 | 293 | 2.90e-13 | 70.5 |
MS.gene006220.t1 | MTR_4g094588 | 48.649 | 74 | 37 | 1 | 185 | 258 | 179 | 251 | 3.08e-15 | 75.5 |
MS.gene006220.t1 | MTR_2g088000 | 50.000 | 64 | 32 | 0 | 181 | 244 | 346 | 409 | 7.15e-15 | 75.5 |
MS.gene006220.t1 | MTR_3g031220 | 38.542 | 96 | 57 | 2 | 166 | 260 | 346 | 440 | 7.24e-15 | 75.1 |
MS.gene006220.t1 | MTR_3g031220 | 44.444 | 63 | 33 | 2 | 183 | 245 | 197 | 257 | 2.74e-11 | 64.3 |
MS.gene006220.t1 | MTR_3g056100 | 49.206 | 63 | 31 | 1 | 185 | 247 | 403 | 464 | 7.49e-15 | 75.5 |
MS.gene006220.t1 | MTR_3g056100 | 38.961 | 77 | 45 | 2 | 177 | 253 | 236 | 310 | 4.21e-11 | 63.9 |
MS.gene006220.t1 | MTR_3g056100 | 35.345 | 116 | 62 | 3 | 181 | 287 | 255 | 366 | 7.64e-15 | 75.1 |
MS.gene006220.t1 | MTR_3g056100 | 38.961 | 77 | 45 | 2 | 177 | 253 | 92 | 166 | 4.92e-11 | 63.5 |
MS.gene006220.t1 | MTR_3g056100 | 49.206 | 63 | 31 | 1 | 185 | 247 | 416 | 477 | 7.86e-15 | 75.1 |
MS.gene006220.t1 | MTR_3g056100 | 38.961 | 77 | 45 | 2 | 177 | 253 | 236 | 310 | 4.45e-11 | 63.9 |
MS.gene006220.t1 | MTR_3g056100 | 35.345 | 116 | 62 | 3 | 181 | 287 | 268 | 379 | 8.35e-15 | 75.1 |
MS.gene006220.t1 | MTR_3g056100 | 38.961 | 77 | 45 | 2 | 177 | 253 | 92 | 166 | 5.42e-11 | 63.5 |
MS.gene006220.t1 | MTR_5g094430 | 46.479 | 71 | 34 | 2 | 185 | 252 | 365 | 434 | 8.50e-15 | 75.1 |
MS.gene006220.t1 | MTR_2g023930 | 49.206 | 63 | 32 | 0 | 182 | 244 | 303 | 365 | 1.06e-14 | 74.7 |
MS.gene006220.t1 | MTR_4g049760 | 45.205 | 73 | 40 | 0 | 182 | 254 | 288 | 360 | 1.10e-14 | 74.7 |
MS.gene006220.t1 | MTR_5g094430 | 46.479 | 71 | 34 | 2 | 185 | 252 | 253 | 322 | 1.13e-14 | 74.3 |
MS.gene006220.t1 | MTR_5g094430 | 46.479 | 71 | 34 | 2 | 185 | 252 | 231 | 300 | 1.15e-14 | 74.3 |
MS.gene006220.t1 | MTR_4g007060 | 41.333 | 75 | 44 | 0 | 182 | 256 | 126 | 200 | 1.19e-14 | 73.2 |
MS.gene006220.t1 | MTR_5g091390 | 52.459 | 61 | 28 | 1 | 185 | 245 | 158 | 217 | 1.20e-14 | 73.6 |
MS.gene006220.t1 | MTR_4g007060 | 41.333 | 75 | 44 | 0 | 182 | 256 | 160 | 234 | 1.36e-14 | 73.6 |
MS.gene006220.t1 | MTR_5g074400 | 41.176 | 85 | 48 | 2 | 166 | 249 | 401 | 484 | 1.67e-14 | 74.3 |
MS.gene006220.t1 | MTR_5g074400 | 48.387 | 62 | 30 | 2 | 183 | 244 | 242 | 301 | 8.31e-12 | 66.2 |
MS.gene006220.t1 | MTR_5g043880 | 42.222 | 90 | 44 | 3 | 158 | 241 | 93 | 180 | 1.70e-14 | 72.8 |
MS.gene006220.t1 | MTR_8g092010 | 39.759 | 83 | 47 | 2 | 164 | 244 | 86 | 167 | 1.72e-14 | 70.9 |
MS.gene006220.t1 | MTR_1g015140 | 52.632 | 57 | 26 | 1 | 185 | 241 | 103 | 158 | 2.08e-14 | 70.1 |
MS.gene006220.t1 | MTR_4g132430 | 34.351 | 131 | 73 | 2 | 185 | 303 | 128 | 257 | 2.45e-14 | 73.2 |
MS.gene006220.t1 | MTR_7g071120 | 37.624 | 101 | 60 | 3 | 163 | 262 | 302 | 400 | 2.83e-14 | 73.6 |
MS.gene006220.t1 | MTR_7g071120 | 45.161 | 62 | 32 | 2 | 183 | 244 | 165 | 224 | 1.12e-11 | 65.5 |
MS.gene006220.t1 | MTR_4g094412 | 52.632 | 57 | 27 | 0 | 189 | 245 | 239 | 295 | 2.94e-14 | 73.6 |
MS.gene006220.t1 | MTR_3g106060 | 38.824 | 85 | 52 | 0 | 185 | 269 | 139 | 223 | 3.07e-14 | 72.0 |
MS.gene006220.t1 | MTR_3g090860 | 52.632 | 57 | 25 | 1 | 185 | 239 | 134 | 190 | 3.08e-14 | 72.8 |
MS.gene006220.t1 | MTR_8g099350 | 41.176 | 85 | 43 | 2 | 162 | 239 | 105 | 189 | 3.18e-14 | 72.8 |
MS.gene006220.t1 | MTR_4g094412 | 50.820 | 61 | 30 | 0 | 185 | 245 | 244 | 304 | 3.36e-14 | 73.2 |
MS.gene006220.t1 | MTR_4g132430 | 38.053 | 113 | 56 | 3 | 185 | 283 | 262 | 374 | 4.47e-14 | 72.8 |
MS.gene006220.t1 | MTR_4g049790 | 43.836 | 73 | 41 | 0 | 182 | 254 | 310 | 382 | 5.72e-14 | 72.8 |
MS.gene006220.t1 | MTR_7g109800 | 40.860 | 93 | 53 | 2 | 185 | 276 | 146 | 237 | 8.56e-14 | 70.9 |
MS.gene006220.t1 | MTR_4g107970 | 40.449 | 89 | 48 | 2 | 156 | 244 | 155 | 238 | 8.71e-14 | 72.0 |
MS.gene006220.t1 | MTR_4g122530 | 45.902 | 61 | 32 | 1 | 185 | 245 | 209 | 268 | 9.66e-14 | 71.6 |
MS.gene006220.t1 | MTR_3g095040 | 46.667 | 60 | 31 | 1 | 185 | 244 | 119 | 177 | 1.02e-13 | 69.3 |
MS.gene006220.t1 | MTR_7g009730 | 38.835 | 103 | 58 | 2 | 152 | 254 | 192 | 289 | 1.33e-13 | 71.6 |
MS.gene006220.t1 | MTR_4g107970 | 50.000 | 60 | 30 | 0 | 185 | 244 | 256 | 315 | 1.50e-13 | 71.6 |
MS.gene006220.t1 | MTR_2g033820 | 47.541 | 61 | 31 | 1 | 185 | 245 | 204 | 263 | 1.80e-13 | 70.5 |
MS.gene006220.t1 | MTR_2g105060 | 34.615 | 104 | 65 | 1 | 182 | 285 | 92 | 192 | 2.13e-13 | 68.9 |
MS.gene006220.t1 | MTR_2g105060 | 35.644 | 101 | 62 | 1 | 185 | 285 | 170 | 267 | 3.19e-13 | 69.3 |
MS.gene006220.t1 | MTR_8g007270 | 40.506 | 79 | 45 | 2 | 165 | 242 | 134 | 211 | 3.64e-13 | 68.2 |
MS.gene006220.t1 | MTR_3g009470 | 49.315 | 73 | 34 | 3 | 183 | 254 | 279 | 349 | 3.76e-13 | 70.1 |
MS.gene006220.t1 | MTR_3g104750 | 50.877 | 57 | 27 | 1 | 185 | 241 | 105 | 160 | 4.30e-13 | 66.6 |
MS.gene006220.t1 | MTR_1g013760 | 36.842 | 76 | 48 | 0 | 185 | 260 | 141 | 216 | 4.92e-13 | 68.6 |
MS.gene006220.t1 | MTR_7g079010 | 43.750 | 64 | 35 | 1 | 178 | 241 | 135 | 197 | 5.32e-13 | 67.4 |
MS.gene006220.t1 | MTR_7g109600 | 39.326 | 89 | 40 | 1 | 204 | 292 | 7 | 81 | 6.43e-13 | 67.0 |
MS.gene006220.t1 | MTR_1g078260 | 42.553 | 94 | 43 | 5 | 172 | 255 | 234 | 326 | 6.90e-13 | 69.3 |
MS.gene006220.t1 | MTR_8g087000 | 51.786 | 56 | 27 | 0 | 204 | 259 | 35 | 90 | 1.10e-12 | 65.9 |
MS.gene006220.t1 | MTR_8g027860 | 35.514 | 107 | 57 | 3 | 163 | 257 | 110 | 216 | 1.35e-12 | 67.8 |
MS.gene006220.t1 | MTR_1g077780 | 44.615 | 65 | 35 | 1 | 181 | 245 | 59 | 122 | 1.59e-12 | 64.7 |
MS.gene006220.t1 | MTR_1g013790 | 33.962 | 106 | 68 | 2 | 185 | 289 | 102 | 206 | 1.82e-12 | 66.6 |
MS.gene006220.t1 | MTR_7g117200 | 44.928 | 69 | 32 | 2 | 185 | 247 | 119 | 187 | 4.32e-12 | 66.2 |
MS.gene006220.t1 | MTR_5g097500 | 44.286 | 70 | 38 | 1 | 178 | 247 | 224 | 292 | 4.91e-12 | 65.9 |
MS.gene006220.t1 | MTR_5g067680 | 50.877 | 57 | 26 | 1 | 185 | 239 | 203 | 259 | 5.28e-12 | 66.2 |
MS.gene006220.t1 | MTR_7g028415 | 42.623 | 61 | 34 | 1 | 181 | 241 | 90 | 149 | 7.88e-12 | 63.2 |
MS.gene006220.t1 | MTR_7g028710 | 42.623 | 61 | 34 | 1 | 181 | 241 | 90 | 149 | 7.88e-12 | 63.2 |
MS.gene006220.t1 | MTR_6g086555 | 49.180 | 61 | 29 | 2 | 185 | 244 | 207 | 266 | 1.07e-11 | 65.5 |
MS.gene006220.t1 | MTR_8g092140 | 46.552 | 58 | 30 | 1 | 185 | 242 | 161 | 217 | 1.24e-11 | 63.9 |
MS.gene006220.t1 | MTR_5g067700 | 41.250 | 80 | 40 | 2 | 162 | 239 | 89 | 163 | 1.55e-11 | 63.5 |
MS.gene006220.t1 | MTR_3g095080 | 46.552 | 58 | 30 | 1 | 185 | 242 | 169 | 225 | 2.09e-11 | 63.2 |
MS.gene006220.t1 | MTR_3g031220 | 44.444 | 63 | 33 | 2 | 183 | 245 | 197 | 257 | 2.09e-11 | 64.3 |
MS.gene006220.t1 | MTR_3g095080 | 46.552 | 58 | 30 | 1 | 185 | 242 | 145 | 201 | 2.36e-11 | 62.8 |
MS.gene006220.t1 | MTR_7g105000 | 58.333 | 48 | 20 | 0 | 157 | 204 | 293 | 340 | 4.52e-11 | 63.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene006220.t1 | AT5G52830 | 75.229 | 109 | 23 | 1 | 162 | 266 | 143 | 251 | 4.74e-53 | 177 |
MS.gene006220.t1 | AT4G01250 | 40.000 | 265 | 87 | 8 | 1 | 257 | 1 | 201 | 1.19e-47 | 162 |
MS.gene006220.t1 | AT4G23550 | 62.745 | 102 | 38 | 0 | 169 | 270 | 125 | 226 | 6.05e-39 | 139 |
MS.gene006220.t1 | AT1G30650 | 46.067 | 178 | 67 | 5 | 156 | 305 | 177 | 353 | 2.86e-36 | 135 |
MS.gene006220.t1 | AT2G34830 | 56.757 | 111 | 39 | 1 | 151 | 252 | 173 | 283 | 3.68e-36 | 135 |
MS.gene006220.t1 | AT2G34830 | 56.757 | 111 | 39 | 1 | 151 | 252 | 182 | 292 | 3.81e-36 | 135 |
MS.gene006220.t1 | AT5G45050 | 43.716 | 183 | 85 | 4 | 140 | 310 | 1003 | 1179 | 7.01e-33 | 129 |
MS.gene006220.t1 | AT5G45050 | 43.716 | 183 | 85 | 4 | 140 | 310 | 1142 | 1318 | 7.18e-33 | 129 |
MS.gene006220.t1 | AT5G45050 | 43.716 | 183 | 85 | 4 | 140 | 310 | 1114 | 1290 | 7.21e-33 | 129 |
MS.gene006220.t1 | AT1G29280 | 65.278 | 72 | 20 | 1 | 184 | 255 | 74 | 140 | 9.85e-26 | 103 |
MS.gene006220.t1 | AT4G24240 | 58.824 | 85 | 29 | 2 | 163 | 242 | 256 | 339 | 1.61e-25 | 104 |
MS.gene006220.t1 | AT3G58710 | 58.537 | 82 | 26 | 1 | 184 | 257 | 71 | 152 | 1.70e-25 | 103 |
MS.gene006220.t1 | AT3G58710 | 58.537 | 82 | 26 | 1 | 184 | 257 | 70 | 151 | 1.93e-25 | 102 |
MS.gene006220.t1 | AT2G23320 | 52.381 | 84 | 36 | 1 | 163 | 242 | 215 | 298 | 6.23e-25 | 102 |
MS.gene006220.t1 | AT5G28650 | 67.797 | 59 | 19 | 0 | 185 | 243 | 263 | 321 | 1.12e-23 | 99.4 |
MS.gene006220.t1 | AT5G45260 | 49.505 | 101 | 47 | 3 | 161 | 258 | 1185 | 1284 | 1.23e-23 | 102 |
MS.gene006220.t1 | AT3G04670 | 67.797 | 59 | 19 | 0 | 185 | 243 | 263 | 321 | 2.25e-23 | 98.6 |
MS.gene006220.t1 | AT2G24570 | 51.220 | 82 | 38 | 1 | 162 | 241 | 219 | 300 | 3.13e-22 | 95.1 |
MS.gene006220.t1 | AT4G31550 | 50.000 | 82 | 39 | 1 | 162 | 241 | 222 | 303 | 4.42e-22 | 94.7 |
MS.gene006220.t1 | AT4G31550 | 48.780 | 82 | 40 | 1 | 162 | 241 | 221 | 302 | 1.57e-21 | 93.2 |
MS.gene006220.t1 | AT2G30590 | 51.250 | 80 | 38 | 1 | 164 | 243 | 294 | 372 | 1.69e-20 | 91.3 |
MS.gene006220.t1 | AT4G30935 | 36.364 | 132 | 79 | 3 | 168 | 295 | 314 | 444 | 2.61e-18 | 85.5 |
MS.gene006220.t1 | AT2G04880 | 44.565 | 92 | 44 | 3 | 165 | 250 | 287 | 377 | 8.39e-18 | 84.0 |
MS.gene006220.t1 | AT2G04880 | 44.565 | 92 | 44 | 3 | 165 | 250 | 263 | 353 | 9.13e-18 | 84.0 |
MS.gene006220.t1 | AT4G26440 | 43.158 | 95 | 49 | 3 | 166 | 256 | 353 | 446 | 1.12e-16 | 80.9 |
MS.gene006220.t1 | AT4G26440 | 47.059 | 85 | 38 | 4 | 173 | 256 | 171 | 249 | 5.92e-15 | 75.9 |
MS.gene006220.t1 | AT3G01080 | 53.125 | 64 | 29 | 1 | 181 | 244 | 341 | 403 | 1.92e-16 | 79.7 |
MS.gene006220.t1 | AT3G01080 | 42.308 | 78 | 43 | 2 | 180 | 257 | 201 | 276 | 1.05e-13 | 71.6 |
MS.gene006220.t1 | AT3G01080 | 53.125 | 64 | 29 | 1 | 181 | 244 | 303 | 365 | 2.09e-16 | 79.7 |
MS.gene006220.t1 | AT3G01080 | 42.308 | 78 | 43 | 2 | 180 | 257 | 163 | 238 | 1.11e-13 | 71.6 |
MS.gene006220.t1 | AT5G56270 | 43.373 | 83 | 45 | 2 | 166 | 247 | 468 | 549 | 4.74e-16 | 79.0 |
MS.gene006220.t1 | AT5G56270 | 48.333 | 60 | 29 | 2 | 185 | 244 | 274 | 331 | 4.25e-12 | 67.0 |
MS.gene006220.t1 | AT4G04450 | 39.326 | 89 | 54 | 0 | 182 | 270 | 196 | 284 | 7.21e-16 | 78.2 |
MS.gene006220.t1 | AT1G13960 | 41.176 | 85 | 48 | 2 | 161 | 244 | 385 | 468 | 7.30e-16 | 78.2 |
MS.gene006220.t1 | AT1G13960 | 34.862 | 109 | 60 | 4 | 141 | 244 | 185 | 287 | 8.33e-13 | 68.9 |
MS.gene006220.t1 | AT1G13960 | 44.595 | 74 | 39 | 2 | 172 | 244 | 243 | 315 | 9.62e-16 | 77.4 |
MS.gene006220.t1 | AT1G13960 | 34.862 | 109 | 60 | 4 | 141 | 244 | 32 | 134 | 1.96e-12 | 67.4 |
MS.gene006220.t1 | AT2G38470 | 39.091 | 110 | 62 | 3 | 172 | 277 | 349 | 457 | 1.06e-15 | 77.8 |
MS.gene006220.t1 | AT2G38470 | 36.290 | 124 | 68 | 4 | 185 | 302 | 185 | 303 | 6.73e-13 | 69.3 |
MS.gene006220.t1 | AT1G69310 | 43.333 | 90 | 43 | 3 | 158 | 241 | 116 | 203 | 1.09e-15 | 76.3 |
MS.gene006220.t1 | AT1G69310 | 43.333 | 90 | 43 | 3 | 158 | 241 | 116 | 203 | 1.09e-15 | 76.3 |
MS.gene006220.t1 | AT1G69310 | 43.333 | 90 | 43 | 3 | 158 | 241 | 116 | 203 | 1.09e-15 | 76.3 |
MS.gene006220.t1 | AT4G04450 | 39.326 | 89 | 54 | 0 | 182 | 270 | 290 | 378 | 1.34e-15 | 77.4 |
MS.gene006220.t1 | AT2G03340 | 43.038 | 79 | 43 | 2 | 172 | 249 | 402 | 479 | 1.66e-15 | 77.4 |
MS.gene006220.t1 | AT2G03340 | 42.308 | 78 | 43 | 2 | 179 | 256 | 245 | 320 | 5.03e-13 | 69.7 |
MS.gene006220.t1 | AT3G62340 | 35.115 | 131 | 80 | 3 | 163 | 289 | 95 | 224 | 2.15e-15 | 75.5 |
MS.gene006220.t1 | AT5G07100 | 39.796 | 98 | 53 | 3 | 164 | 256 | 213 | 309 | 2.23e-15 | 75.9 |
MS.gene006220.t1 | AT5G07100 | 41.176 | 68 | 39 | 1 | 177 | 244 | 110 | 176 | 1.66e-12 | 67.4 |
MS.gene006220.t1 | AT5G07100 | 39.796 | 98 | 53 | 3 | 164 | 256 | 120 | 216 | 3.30e-15 | 73.6 |
MS.gene006220.t1 | AT5G07100 | 41.176 | 68 | 39 | 1 | 177 | 244 | 17 | 83 | 1.01e-12 | 66.6 |
MS.gene006220.t1 | AT5G07100 | 39.796 | 98 | 53 | 3 | 164 | 256 | 120 | 216 | 3.30e-15 | 73.6 |
MS.gene006220.t1 | AT5G07100 | 41.176 | 68 | 39 | 1 | 177 | 244 | 17 | 83 | 1.01e-12 | 66.6 |
MS.gene006220.t1 | AT5G07100 | 39.796 | 98 | 53 | 3 | 164 | 256 | 120 | 216 | 3.30e-15 | 73.6 |
MS.gene006220.t1 | AT5G07100 | 41.176 | 68 | 39 | 1 | 177 | 244 | 17 | 83 | 1.01e-12 | 66.6 |
MS.gene006220.t1 | AT5G07100 | 39.796 | 98 | 53 | 3 | 164 | 256 | 120 | 216 | 3.30e-15 | 73.6 |
MS.gene006220.t1 | AT5G07100 | 41.176 | 68 | 39 | 1 | 177 | 244 | 17 | 83 | 1.01e-12 | 66.6 |
MS.gene006220.t1 | AT2G21900 | 40.449 | 89 | 45 | 2 | 164 | 245 | 82 | 169 | 3.64e-15 | 73.2 |
MS.gene006220.t1 | AT4G22070 | 49.206 | 63 | 32 | 0 | 182 | 244 | 295 | 357 | 4.10e-15 | 76.3 |
MS.gene006220.t1 | AT4G22070 | 49.206 | 63 | 32 | 0 | 182 | 244 | 295 | 357 | 4.10e-15 | 76.3 |
MS.gene006220.t1 | AT4G22070 | 49.206 | 63 | 32 | 0 | 182 | 244 | 295 | 357 | 4.10e-15 | 76.3 |
MS.gene006220.t1 | AT4G22070 | 49.206 | 63 | 32 | 0 | 182 | 244 | 295 | 357 | 4.10e-15 | 76.3 |
MS.gene006220.t1 | AT1G29860 | 43.590 | 78 | 40 | 2 | 185 | 262 | 137 | 210 | 4.37e-15 | 74.7 |
MS.gene006220.t1 | AT2G40740 | 41.667 | 120 | 53 | 5 | 160 | 269 | 152 | 264 | 5.14e-15 | 74.7 |
MS.gene006220.t1 | AT2G40740 | 41.667 | 120 | 53 | 5 | 160 | 269 | 143 | 255 | 5.16e-15 | 74.3 |
MS.gene006220.t1 | AT1G68150 | 48.000 | 75 | 38 | 1 | 185 | 259 | 236 | 309 | 5.44e-15 | 75.1 |
MS.gene006220.t1 | AT4G01720 | 53.333 | 60 | 28 | 0 | 185 | 244 | 240 | 299 | 5.63e-15 | 75.5 |
MS.gene006220.t1 | AT2G37260 | 45.882 | 85 | 39 | 3 | 162 | 241 | 323 | 405 | 6.18e-15 | 75.5 |
MS.gene006220.t1 | AT2G37260 | 41.935 | 93 | 52 | 2 | 178 | 270 | 159 | 249 | 1.67e-14 | 73.9 |
MS.gene006220.t1 | AT5G26170 | 51.724 | 58 | 27 | 1 | 185 | 242 | 114 | 170 | 6.26e-15 | 72.0 |
MS.gene006220.t1 | AT2G37260 | 45.882 | 85 | 39 | 3 | 162 | 241 | 243 | 325 | 7.04e-15 | 74.7 |
MS.gene006220.t1 | AT2G37260 | 41.935 | 93 | 52 | 2 | 178 | 270 | 79 | 169 | 1.68e-14 | 73.6 |
MS.gene006220.t1 | AT1G62300 | 49.206 | 63 | 32 | 0 | 182 | 244 | 310 | 372 | 7.20e-15 | 75.5 |
MS.gene006220.t1 | AT2G37260 | 45.882 | 85 | 39 | 3 | 162 | 241 | 241 | 323 | 7.43e-15 | 74.7 |
MS.gene006220.t1 | AT2G37260 | 41.935 | 93 | 52 | 2 | 178 | 270 | 77 | 167 | 1.97e-14 | 73.2 |
MS.gene006220.t1 | AT5G46350 | 47.297 | 74 | 38 | 1 | 185 | 258 | 184 | 256 | 7.86e-15 | 74.3 |
MS.gene006220.t1 | AT5G49520 | 50.769 | 65 | 30 | 2 | 180 | 244 | 218 | 280 | 1.24e-14 | 74.3 |
MS.gene006220.t1 | AT5G15130 | 45.714 | 70 | 38 | 0 | 185 | 254 | 228 | 297 | 1.46e-14 | 74.3 |
MS.gene006220.t1 | AT5G43290 | 39.560 | 91 | 54 | 1 | 151 | 241 | 81 | 170 | 1.46e-14 | 72.8 |
MS.gene006220.t1 | AT4G18170 | 51.613 | 62 | 29 | 1 | 185 | 246 | 173 | 233 | 1.49e-14 | 73.6 |
MS.gene006220.t1 | AT5G15130 | 45.714 | 70 | 38 | 0 | 185 | 254 | 186 | 255 | 1.60e-14 | 74.3 |
MS.gene006220.t1 | AT3G01080 | 42.308 | 78 | 43 | 2 | 180 | 257 | 201 | 276 | 6.20e-14 | 71.6 |
MS.gene006220.t1 | AT4G26640 | 43.478 | 69 | 38 | 1 | 181 | 249 | 338 | 405 | 7.02e-14 | 72.4 |
MS.gene006220.t1 | AT4G23810 | 35.115 | 131 | 65 | 5 | 185 | 310 | 159 | 274 | 7.30e-14 | 71.6 |
MS.gene006220.t1 | AT4G26640 | 43.478 | 69 | 38 | 1 | 181 | 249 | 378 | 445 | 7.77e-14 | 72.4 |
MS.gene006220.t1 | AT4G26640 | 43.478 | 69 | 38 | 1 | 181 | 249 | 306 | 373 | 9.15e-14 | 72.0 |
MS.gene006220.t1 | AT1G69810 | 47.887 | 71 | 36 | 1 | 185 | 254 | 204 | 274 | 9.23e-14 | 71.6 |
MS.gene006220.t1 | AT4G26640 | 43.478 | 69 | 38 | 1 | 181 | 249 | 202 | 269 | 1.01e-13 | 71.6 |
MS.gene006220.t1 | AT4G26640 | 43.478 | 69 | 38 | 1 | 181 | 249 | 202 | 269 | 1.01e-13 | 71.6 |
MS.gene006220.t1 | AT4G26640 | 43.478 | 69 | 38 | 1 | 181 | 249 | 202 | 269 | 1.01e-13 | 71.6 |
MS.gene006220.t1 | AT4G26640 | 43.478 | 69 | 38 | 1 | 181 | 249 | 202 | 269 | 1.01e-13 | 71.6 |
MS.gene006220.t1 | AT1G80840 | 39.437 | 71 | 43 | 0 | 185 | 255 | 147 | 217 | 1.12e-13 | 70.9 |
MS.gene006220.t1 | AT1G69810 | 47.887 | 71 | 36 | 1 | 185 | 254 | 146 | 216 | 1.16e-13 | 70.9 |
MS.gene006220.t1 | AT2G30250 | 44.000 | 75 | 40 | 2 | 172 | 245 | 315 | 388 | 1.17e-13 | 71.2 |
MS.gene006220.t1 | AT2G25000 | 46.667 | 60 | 32 | 0 | 185 | 244 | 104 | 163 | 2.16e-13 | 68.9 |
MS.gene006220.t1 | AT2G25000 | 46.667 | 60 | 32 | 0 | 185 | 244 | 104 | 163 | 2.16e-13 | 68.9 |
MS.gene006220.t1 | AT2G25000 | 46.667 | 60 | 32 | 0 | 185 | 244 | 126 | 185 | 3.33e-13 | 68.6 |
MS.gene006220.t1 | AT2G44745 | 41.026 | 78 | 44 | 2 | 165 | 241 | 125 | 201 | 3.54e-13 | 68.2 |
MS.gene006220.t1 | AT4G31800 | 41.558 | 77 | 45 | 0 | 185 | 261 | 112 | 188 | 3.82e-13 | 68.6 |
MS.gene006220.t1 | AT1G18860 | 50.000 | 60 | 30 | 0 | 185 | 244 | 240 | 299 | 4.00e-13 | 70.1 |
MS.gene006220.t1 | AT2G40750 | 34.426 | 122 | 65 | 5 | 183 | 290 | 151 | 271 | 4.49e-13 | 69.3 |
MS.gene006220.t1 | AT1G55600 | 37.500 | 80 | 48 | 2 | 166 | 244 | 288 | 366 | 5.15e-13 | 69.7 |
MS.gene006220.t1 | AT2G25000 | 46.667 | 60 | 32 | 0 | 185 | 244 | 147 | 206 | 5.23e-13 | 68.6 |
MS.gene006220.t1 | AT5G64810 | 49.123 | 57 | 28 | 1 | 185 | 241 | 111 | 166 | 5.23e-13 | 67.0 |
MS.gene006220.t1 | AT4G31800 | 41.558 | 77 | 45 | 0 | 185 | 261 | 177 | 253 | 5.85e-13 | 68.6 |
MS.gene006220.t1 | AT2G46130 | 40.000 | 80 | 46 | 2 | 163 | 241 | 8 | 86 | 6.82e-13 | 64.7 |
MS.gene006220.t1 | AT5G41570 | 39.744 | 78 | 45 | 2 | 165 | 241 | 78 | 154 | 8.52e-13 | 66.2 |
MS.gene006220.t1 | AT1G64000 | 45.161 | 62 | 33 | 1 | 180 | 241 | 110 | 170 | 8.96e-13 | 66.6 |
MS.gene006220.t1 | AT2G46400 | 33.333 | 117 | 72 | 3 | 129 | 239 | 45 | 161 | 8.99e-13 | 68.2 |
MS.gene006220.t1 | AT2G47260 | 37.864 | 103 | 54 | 4 | 166 | 260 | 154 | 254 | 9.63e-13 | 68.2 |
MS.gene006220.t1 | AT3G56400 | 41.026 | 78 | 39 | 3 | 164 | 239 | 105 | 177 | 1.45e-12 | 67.4 |
MS.gene006220.t1 | AT3G01970 | 43.548 | 62 | 34 | 1 | 181 | 242 | 62 | 122 | 2.39e-12 | 63.9 |
MS.gene006220.t1 | AT5G13080 | 42.623 | 61 | 34 | 1 | 181 | 241 | 64 | 123 | 2.60e-12 | 63.9 |
MS.gene006220.t1 | AT4G11070 | 50.877 | 57 | 26 | 1 | 185 | 239 | 110 | 166 | 3.70e-12 | 66.2 |
MS.gene006220.t1 | AT4G11070 | 50.877 | 57 | 26 | 1 | 185 | 239 | 142 | 198 | 4.05e-12 | 66.2 |
MS.gene006220.t1 | AT5G24110 | 39.024 | 82 | 48 | 1 | 160 | 239 | 89 | 170 | 5.24e-12 | 65.9 |
MS.gene006220.t1 | AT4G39410 | 42.667 | 75 | 42 | 1 | 185 | 259 | 224 | 297 | 1.07e-11 | 65.1 |
Find 78 sgRNAs with CRISPR-Local
Find 99 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGGATGTGGAGAACCTTTAA+TGG | 0.267330 | 1.4:+77494686 | None:intergenic |
TGCAATATGAGGAGGGGAAT+TGG | 0.276980 | 1.4:+77495169 | None:intergenic |
TCTTGAAGCTCATTGGTTAT+AGG | 0.277524 | 1.4:+77495260 | None:intergenic |
GTGTTTGAGGCTGGATGCTT+TGG | 0.300180 | 1.4:+77494976 | None:intergenic |
CTTTCGCGCGGTACAACCTT+TGG | 0.306785 | 1.4:+77494445 | None:intergenic |
TTGTGGGCATGGCGAAAATA+TGG | 0.311492 | 1.4:-77494717 | MS.gene006220:CDS |
TGTTTGAGGCTGGATGCTTT+GGG | 0.315208 | 1.4:+77494977 | None:intergenic |
GTTATAGGTTGCACTACATT+AGG | 0.317458 | 1.4:+77495275 | None:intergenic |
TCTTTAGCACCAAACTCTTT+TGG | 0.322210 | 1.4:-77494242 | MS.gene006220:CDS |
GCAATATGAGGAGGGGAATT+GGG | 0.331773 | 1.4:+77495170 | None:intergenic |
TCTTCTTCACCAAAAGAGTT+TGG | 0.338560 | 1.4:+77494233 | None:intergenic |
CTACCACTTCCTCTTCCATT+TGG | 0.346152 | 1.4:-77495112 | MS.gene006220:CDS |
AAACACCTAGATCAAGAAAA+AGG | 0.350761 | 1.4:-77494959 | MS.gene006220:intron |
GGGTAAAAGATGTCAATAAT+TGG | 0.354816 | 1.4:+77495231 | None:intergenic |
AGGAAGTGGTAGGGACAAAA+TGG | 0.358832 | 1.4:+77495123 | None:intergenic |
TATAACAATGGCTGAGGATT+GGG | 0.363678 | 1.4:-77495441 | None:intergenic |
TCTGTTGTTGTTGTAATTGT+TGG | 0.364018 | 1.4:+77495039 | None:intergenic |
TTGATCTAGGTGTTTGAGGC+TGG | 0.368009 | 1.4:+77494967 | None:intergenic |
TGATTGGCAGCTTCGAACTA+TGG | 0.377700 | 1.4:+77495409 | None:intergenic |
TTTGCAATTAGAAGAGGAAA+TGG | 0.384615 | 1.4:+77495328 | None:intergenic |
TTTCTTGATCTAGGTGTTTG+AGG | 0.387303 | 1.4:+77494963 | None:intergenic |
GTTGTTGTAATTGTTGGTTA+TGG | 0.398557 | 1.4:+77495045 | None:intergenic |
GTTTAGATCTTGAAGCTCAT+TGG | 0.407230 | 1.4:+77495253 | None:intergenic |
GGATGTGGAGAACCTTTAAT+GGG | 0.413222 | 1.4:+77494687 | None:intergenic |
TTCTGTTGTGGATGTATTGG+TGG | 0.430239 | 1.4:+77495385 | None:intergenic |
GAAGTTTCTTGCACAATATG+AGG | 0.432485 | 1.4:+77495089 | None:intergenic |
TGGATGTATTGGTGGCTGAT+TGG | 0.440667 | 1.4:+77495393 | None:intergenic |
ATGTTCACTGTGACATATAC+AGG | 0.458166 | 1.4:-77494392 | MS.gene006220:CDS |
TTGCACAATATGAGGCCAAA+TGG | 0.465159 | 1.4:+77495097 | None:intergenic |
TTATAACAATGGCTGAGGAT+TGG | 0.466049 | 1.4:-77495442 | None:intergenic |
CAAGAAGAAGTTGAGCTGTT+GGG | 0.466337 | 1.4:+77494269 | None:intergenic |
CGGATGTGTCACCGGAGACT+TGG | 0.472713 | 1.4:+77494313 | None:intergenic |
AGACTTGGTTCGTGTACTTC+CGG | 0.473267 | 1.4:+77494328 | None:intergenic |
GCAAGAAGAAGTTGAGCTGT+TGG | 0.473676 | 1.4:+77494268 | None:intergenic |
TGCATTTATAACAATGGCTG+AGG | 0.489485 | 1.4:-77495447 | None:intergenic |
TTCTACTTTGCAATTAGAAG+AGG | 0.491486 | 1.4:+77495322 | None:intergenic |
AGAGGTTATCTGCGGTTACA+TGG | 0.495635 | 1.4:+77494748 | None:intergenic |
TAACCTCTCAACAGATTTGT+GGG | 0.500103 | 1.4:-77494733 | MS.gene006220:CDS |
AAAAGAGTTTGGTGCTAAAG+AGG | 0.510944 | 1.4:+77494244 | None:intergenic |
AGGCCAAATGGAAGAGGAAG+TGG | 0.511721 | 1.4:+77495109 | None:intergenic |
TTCCGGCTAGCGAGTTCCGA+TGG | 0.517215 | 1.4:+77494345 | None:intergenic |
TCCCTTGGTCCTGTTTAGGA+AGG | 0.518014 | 1.4:+77494152 | None:intergenic |
TTATATCTGTACCTTGGATG+TGG | 0.528855 | 1.4:+77494672 | None:intergenic |
ATAACCTCTCAACAGATTTG+TGG | 0.535451 | 1.4:-77494734 | MS.gene006220:CDS |
CTAGTAGTAGTGGTGATGGT+GGG | 0.535550 | 1.4:+77495209 | None:intergenic |
ACCCATCGGAACTCGCTAGC+CGG | 0.537516 | 1.4:-77494347 | MS.gene006220:CDS |
TCCGATGGGTAGGTCTTGCA+TGG | 0.545684 | 1.4:+77494360 | None:intergenic |
CCTCATATTGCAAAATACAT+TGG | 0.547832 | 1.4:-77495158 | MS.gene006220:CDS |
GAGGTGGTCGGATGTGTCAC+CGG | 0.563562 | 1.4:+77494305 | None:intergenic |
TAGTAGTAGTGGTGATGGTG+GGG | 0.565045 | 1.4:+77495210 | None:intergenic |
TTAGAAGAGGAAATGGAAGA+TGG | 0.565399 | 1.4:+77495335 | None:intergenic |
GTTTGAGGCTGGATGCTTTG+GGG | 0.566369 | 1.4:+77494978 | None:intergenic |
AATATGAGGCCAAATGGAAG+AGG | 0.570788 | 1.4:+77495103 | None:intergenic |
TGACTAGAAATTGAGGTGGT+CGG | 0.577828 | 1.4:+77494293 | None:intergenic |
GAATATGTTGAAGCTAGAAG+TGG | 0.578885 | 1.4:+77495067 | None:intergenic |
TCCGGCTAGCGAGTTCCGAT+GGG | 0.583330 | 1.4:+77494346 | None:intergenic |
AGTAGTAGTGGTGATGGTGG+GGG | 0.585398 | 1.4:+77495211 | None:intergenic |
TCTCAACAGATTTGTGGGCA+TGG | 0.588913 | 1.4:-77494728 | MS.gene006220:CDS |
GAAATTGAAACTGATGATGA+TGG | 0.590055 | 1.4:-77494194 | MS.gene006220:CDS |
GTTGGGTTGACTAGAAATTG+AGG | 0.607818 | 1.4:+77494286 | None:intergenic |
AAGTACACGAACCAAGTCTC+CGG | 0.613947 | 1.4:-77494324 | MS.gene006220:CDS |
TTAAAGGTTCTCCACATCCA+AGG | 0.614226 | 1.4:-77494683 | MS.gene006220:intron |
AAATGGAAGAGGAAGTGGTA+GGG | 0.618377 | 1.4:+77495114 | None:intergenic |
ACTATGACCACTAGTAGTAG+TGG | 0.620104 | 1.4:+77495199 | None:intergenic |
TATAGATGTAGCAGTTCCAA+AGG | 0.623205 | 1.4:-77494461 | MS.gene006220:CDS |
CAAATGGAAGAGGAAGTGGT+AGG | 0.623737 | 1.4:+77495113 | None:intergenic |
ACTAGTAGTAGTGGTGATGG+TGG | 0.627374 | 1.4:+77495208 | None:intergenic |
CCTTTCAACTTGCTTTCGCG+CGG | 0.627775 | 1.4:+77494433 | None:intergenic |
ATCTGTTGAGAGGTTATCTG+CGG | 0.627787 | 1.4:+77494740 | None:intergenic |
GCTAGCGAGTTCCGATGGGT+AGG | 0.628478 | 1.4:+77494350 | None:intergenic |
CCGCGCGAAAGCAAGTTGAA+AGG | 0.629161 | 1.4:-77494433 | MS.gene006220:CDS |
AGAAGAAGAGGACATCGACA+TGG | 0.634163 | 1.4:-77494216 | MS.gene006220:CDS |
ACCATCACCACTACTACTAG+TGG | 0.637150 | 1.4:-77495206 | MS.gene006220:CDS |
ACCACTAGTAGTAGTGGTGA+TGG | 0.637486 | 1.4:+77495205 | None:intergenic |
ATGCCCACAAATCTGTTGAG+AGG | 0.641173 | 1.4:+77494730 | None:intergenic |
AGATGGTATAGTATTTGTCG+TGG | 0.665737 | 1.4:+77495352 | None:intergenic |
ACCATGCAAGACCTACCCAT+CGG | 0.674071 | 1.4:-77494361 | MS.gene006220:CDS |
GGGTTGACTAGAAATTGAGG+TGG | 0.732424 | 1.4:+77494289 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AACTCTAATAAAAATTAATT+TGG | - | chr1.4:77494949-77494968 | MS.gene006220:intron | 10.0% |
!!! | AATCAATGTTTTAAAATTTT+TGG | + | chr1.4:77495019-77495038 | None:intergenic | 10.0% |
!!! | CACTTTTTTGTTGTATTATT+AGG | - | chr1.4:77495110-77495129 | MS.gene006220:CDS | 20.0% |
!!! | TAATACAACAAAAAAGTGTA+AGG | + | chr1.4:77495108-77495127 | None:intergenic | 20.0% |
! | ATGTACTATTATTTATGCCA+TGG | + | chr1.4:77494751-77494770 | None:intergenic | 25.0% |
! | TTTCTGTTGAATAGGAAAAA+AGG | + | chr1.4:77494808-77494827 | None:intergenic | 25.0% |
AAAAAGTCAACAAGGGAAAA+TGG | - | chr1.4:77494825-77494844 | MS.gene006220:intron | 30.0% | |
AAACACCTAGATCAAGAAAA+AGG | - | chr1.4:77494641-77494660 | MS.gene006220:intron | 30.0% | |
AGTATTTCCTGAGAAATTGA+TGG | + | chr1.4:77495080-77495099 | None:intergenic | 30.0% | |
CCTCATATTGCAAAATACAT+TGG | - | chr1.4:77494442-77494461 | MS.gene006220:CDS | 30.0% | |
GGGTAAAAGATGTCAATAAT+TGG | + | chr1.4:77494372-77494391 | None:intergenic | 30.0% | |
TACTATTATTTATGCCATGG+TGG | + | chr1.4:77494748-77494767 | None:intergenic | 30.0% | |
TATGGACAAAAACCCATTAA+AGG | - | chr1.4:77494901-77494920 | MS.gene006220:intron | 30.0% | |
TATTGAACCATCAATTTCTC+AGG | - | chr1.4:77495070-77495089 | MS.gene006220:CDS | 30.0% | |
TCAACAGAAAAAGTCAACAA+GGG | - | chr1.4:77494818-77494837 | MS.gene006220:intron | 30.0% | |
TTAGAGTTATATCTGTACCT+TGG | + | chr1.4:77494937-77494956 | None:intergenic | 30.0% | |
TTCAACAGAAAAAGTCAACA+AGG | - | chr1.4:77494817-77494836 | MS.gene006220:intron | 30.0% | |
TTCTACTTTGCAATTAGAAG+AGG | + | chr1.4:77494281-77494300 | None:intergenic | 30.0% | |
TTTGCAATTAGAAGAGGAAA+TGG | + | chr1.4:77494275-77494294 | None:intergenic | 30.0% | |
! | ATGTATTTTGCAATATGAGG+AGG | + | chr1.4:77494442-77494461 | None:intergenic | 30.0% |
! | ATTTTCTGTTGTGGATGTAT+TGG | + | chr1.4:77494221-77494240 | None:intergenic | 30.0% |
! | CCAATGTATTTTGCAATATG+AGG | + | chr1.4:77494445-77494464 | None:intergenic | 30.0% |
! | GAAATTGAAACTGATGATGA+TGG | - | chr1.4:77495406-77495425 | MS.gene006220:CDS | 30.0% |
! | GGTAAATGAATTTTCTGTTG+TGG | + | chr1.4:77494230-77494249 | None:intergenic | 30.0% |
! | GTTGTTGTAATTGTTGGTTA+TGG | + | chr1.4:77494558-77494577 | None:intergenic | 30.0% |
! | TACTACCTTTTTCTTGATCT+AGG | + | chr1.4:77494649-77494668 | None:intergenic | 30.0% |
! | TCTGTTGTTGTTGTAATTGT+TGG | + | chr1.4:77494564-77494583 | None:intergenic | 30.0% |
! | TGTATTTTGCAATATGAGGA+GGG | + | chr1.4:77494441-77494460 | None:intergenic | 30.0% |
!! | GTTGACTTTTTCTGTTGAAT+AGG | + | chr1.4:77494816-77494835 | None:intergenic | 30.0% |
AGACGTAGTGTCAAATCTTT+CGG | + | chr1.4:77494993-77495012 | None:intergenic | 35.0% | |
AGATGGTATAGTATTTGTCG+TGG | + | chr1.4:77494251-77494270 | None:intergenic | 35.0% | |
ATAACCTCTCAACAGATTTG+TGG | - | chr1.4:77494866-77494885 | MS.gene006220:intron | 35.0% | |
ATGTTCACTGTGACATATAC+AGG | - | chr1.4:77495208-77495227 | MS.gene006220:CDS | 35.0% | |
GAAGTTTCTTGCACAATATG+AGG | + | chr1.4:77494514-77494533 | None:intergenic | 35.0% | |
GAATATGTTGAAGCTAGAAG+TGG | + | chr1.4:77494536-77494555 | None:intergenic | 35.0% | |
GTTATAGGTTGCACTACATT+AGG | + | chr1.4:77494328-77494347 | None:intergenic | 35.0% | |
GTTTAGATCTTGAAGCTCAT+TGG | + | chr1.4:77494350-77494369 | None:intergenic | 35.0% | |
TAACCTCTCAACAGATTTGT+GGG | - | chr1.4:77494867-77494886 | MS.gene006220:intron | 35.0% | |
TATAGATGTAGCAGTTCCAA+AGG | - | chr1.4:77495139-77495158 | MS.gene006220:CDS | 35.0% | |
TCTTCTTCACCAAAAGAGTT+TGG | + | chr1.4:77495370-77495389 | None:intergenic | 35.0% | |
TTAGAAGAGGAAATGGAAGA+TGG | + | chr1.4:77494268-77494287 | None:intergenic | 35.0% | |
TTATATCTGTACCTTGGATG+TGG | + | chr1.4:77494931-77494950 | None:intergenic | 35.0% | |
TTTCTTGATCTAGGTGTTTG+AGG | + | chr1.4:77494640-77494659 | None:intergenic | 35.0% | |
! | GTATTTTGCAATATGAGGAG+GGG | + | chr1.4:77494440-77494459 | None:intergenic | 35.0% |
! | TCTTGAAGCTCATTGGTTAT+AGG | + | chr1.4:77494343-77494362 | None:intergenic | 35.0% |
! | TCTTTAGCACCAAACTCTTT+TGG | - | chr1.4:77495358-77495377 | MS.gene006220:CDS | 35.0% |
!! | AAAAGAGTTTGGTGCTAAAG+AGG | + | chr1.4:77495359-77495378 | None:intergenic | 35.0% |
AAATGGAAGAGGAAGTGGTA+GGG | + | chr1.4:77494489-77494508 | None:intergenic | 40.0% | |
AATATGAGGCCAAATGGAAG+AGG | + | chr1.4:77494500-77494519 | None:intergenic | 40.0% | |
ACTATGACCACTAGTAGTAG+TGG | + | chr1.4:77494404-77494423 | None:intergenic | 40.0% | |
ATCTGTTGAGAGGTTATCTG+CGG | + | chr1.4:77494863-77494882 | None:intergenic | 40.0% | |
CAAGAAGAAGTTGAGCTGTT+GGG | + | chr1.4:77495334-77495353 | None:intergenic | 40.0% | |
GGATGTGGAGAACCTTTAAT+GGG | + | chr1.4:77494916-77494935 | None:intergenic | 40.0% | |
TGACTAGAAATTGAGGTGGT+CGG | + | chr1.4:77495310-77495329 | None:intergenic | 40.0% | |
TGGATGTGGAGAACCTTTAA+TGG | + | chr1.4:77494917-77494936 | None:intergenic | 40.0% | |
TTAAAGGTTCTCCACATCCA+AGG | - | chr1.4:77494917-77494936 | MS.gene006220:intron | 40.0% | |
TTACATACACAAAGCCACCA+TGG | - | chr1.4:77494731-77494750 | MS.gene006220:CDS | 40.0% | |
TTCTGTTGTGGATGTATTGG+TGG | + | chr1.4:77494218-77494237 | None:intergenic | 40.0% | |
TTGCACAATATGAGGCCAAA+TGG | + | chr1.4:77494506-77494525 | None:intergenic | 40.0% | |
! | CTCTTTTGGTGAAGAAGAAG+AGG | - | chr1.4:77495372-77495391 | MS.gene006220:CDS | 40.0% |
!! | GTTGGGTTGACTAGAAATTG+AGG | + | chr1.4:77495317-77495336 | None:intergenic | 40.0% |
AAGTACACGAACCAAGTCTC+CGG | - | chr1.4:77495276-77495295 | MS.gene006220:CDS | 45.0% | |
ACCACTAGTAGTAGTGGTGA+TGG | + | chr1.4:77494398-77494417 | None:intergenic | 45.0% | |
ACCATCACCACTACTACTAG+TGG | - | chr1.4:77494394-77494413 | MS.gene006220:CDS | 45.0% | |
AGAAGAAGAGGACATCGACA+TGG | - | chr1.4:77495384-77495403 | MS.gene006220:CDS | 45.0% | |
AGAGGTTATCTGCGGTTACA+TGG | + | chr1.4:77494855-77494874 | None:intergenic | 45.0% | |
AGGAAGTGGTAGGGACAAAA+TGG | + | chr1.4:77494480-77494499 | None:intergenic | 45.0% | |
ATGCCCACAAATCTGTTGAG+AGG | + | chr1.4:77494873-77494892 | None:intergenic | 45.0% | |
CAAATGGAAGAGGAAGTGGT+AGG | + | chr1.4:77494490-77494509 | None:intergenic | 45.0% | |
CTACCACTTCCTCTTCCATT+TGG | - | chr1.4:77494488-77494507 | MS.gene006220:intron | 45.0% | |
GCAAGAAGAAGTTGAGCTGT+TGG | + | chr1.4:77495335-77495354 | None:intergenic | 45.0% | |
GCAATATGAGGAGGGGAATT+GGG | + | chr1.4:77494433-77494452 | None:intergenic | 45.0% | |
GGGTTGACTAGAAATTGAGG+TGG | + | chr1.4:77495314-77495333 | None:intergenic | 45.0% | |
TCTCAACAGATTTGTGGGCA+TGG | - | chr1.4:77494872-77494891 | MS.gene006220:intron | 45.0% | |
TGATTGGCAGCTTCGAACTA+TGG | + | chr1.4:77494194-77494213 | None:intergenic | 45.0% | |
TGCAATATGAGGAGGGGAAT+TGG | + | chr1.4:77494434-77494453 | None:intergenic | 45.0% | |
TTGTGGGCATGGCGAAAATA+TGG | - | chr1.4:77494883-77494902 | MS.gene006220:intron | 45.0% | |
! | AGACTTGGTTCGTGTACTTC+CGG | + | chr1.4:77495275-77495294 | None:intergenic | 45.0% |
! | TGGATGTATTGGTGGCTGAT+TGG | + | chr1.4:77494210-77494229 | None:intergenic | 45.0% |
! | TGTTTGAGGCTGGATGCTTT+GGG | + | chr1.4:77494626-77494645 | None:intergenic | 45.0% |
! | TTGATCTAGGTGTTTGAGGC+TGG | + | chr1.4:77494636-77494655 | None:intergenic | 45.0% |
!! | ACTAGTAGTAGTGGTGATGG+TGG | + | chr1.4:77494395-77494414 | None:intergenic | 45.0% |
!! | CTAGTAGTAGTGGTGATGGT+GGG | + | chr1.4:77494394-77494413 | None:intergenic | 45.0% |
!! | TAGTAGTAGTGGTGATGGTG+GGG | + | chr1.4:77494393-77494412 | None:intergenic | 45.0% |
ACCATGCAAGACCTACCCAT+CGG | - | chr1.4:77495239-77495258 | MS.gene006220:CDS | 50.0% | |
AGGCCAAATGGAAGAGGAAG+TGG | + | chr1.4:77494494-77494513 | None:intergenic | 50.0% | |
! | CCTTTCAACTTGCTTTCGCG+CGG | + | chr1.4:77495170-77495189 | None:intergenic | 50.0% |
! | GTGTTTGAGGCTGGATGCTT+TGG | + | chr1.4:77494627-77494646 | None:intergenic | 50.0% |
! | GTTTGAGGCTGGATGCTTTG+GGG | + | chr1.4:77494625-77494644 | None:intergenic | 50.0% |
!! | AGTAGTAGTGGTGATGGTGG+GGG | + | chr1.4:77494392-77494411 | None:intergenic | 50.0% |
CTTTCGCGCGGTACAACCTT+TGG | + | chr1.4:77495158-77495177 | None:intergenic | 55.0% | |
TCCGATGGGTAGGTCTTGCA+TGG | + | chr1.4:77495243-77495262 | None:intergenic | 55.0% | |
! | CCGCGCGAAAGCAAGTTGAA+AGG | - | chr1.4:77495167-77495186 | MS.gene006220:CDS | 55.0% |
ACCCATCGGAACTCGCTAGC+CGG | - | chr1.4:77495253-77495272 | MS.gene006220:CDS | 60.0% | |
CGGATGTGTCACCGGAGACT+TGG | + | chr1.4:77495290-77495309 | None:intergenic | 60.0% | |
GAGGTGGTCGGATGTGTCAC+CGG | + | chr1.4:77495298-77495317 | None:intergenic | 60.0% | |
GCTAGCGAGTTCCGATGGGT+AGG | + | chr1.4:77495253-77495272 | None:intergenic | 60.0% | |
TCCGGCTAGCGAGTTCCGAT+GGG | + | chr1.4:77495257-77495276 | None:intergenic | 60.0% | |
TTCCGGCTAGCGAGTTCCGA+TGG | + | chr1.4:77495258-77495277 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.4 | gene | 77494166 | 77495456 | 77494166 | ID=MS.gene006220 |
chr1.4 | mRNA | 77494166 | 77495456 | 77494166 | ID=MS.gene006220.t1;Parent=MS.gene006220 |
chr1.4 | exon | 77494960 | 77495456 | 77494960 | ID=MS.gene006220.t1.exon1;Parent=MS.gene006220.t1 |
chr1.4 | CDS | 77494960 | 77495456 | 77494960 | ID=cds.MS.gene006220.t1;Parent=MS.gene006220.t1 |
chr1.4 | exon | 77494684 | 77494797 | 77494684 | ID=MS.gene006220.t1.exon2;Parent=MS.gene006220.t1 |
chr1.4 | CDS | 77494684 | 77494797 | 77494684 | ID=cds.MS.gene006220.t1;Parent=MS.gene006220.t1 |
chr1.4 | exon | 77494166 | 77494490 | 77494166 | ID=MS.gene006220.t1.exon3;Parent=MS.gene006220.t1 |
chr1.4 | CDS | 77494166 | 77494490 | 77494166 | ID=cds.MS.gene006220.t1;Parent=MS.gene006220.t1 |
Gene Sequence |
Protein sequence |