AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene006277

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene006277.t1 MTR_1g100970 97.242 979 27 0 1 979 1 979 0.0 1975
MS.gene006277.t1 MTR_1g100970 97.191 890 25 0 90 979 10 899 0.0 1790
MS.gene006277.t1 MTR_1g100970 96.226 689 26 0 291 979 3 691 0.0 1367
MS.gene006277.t1 MTR_0022s0430 69.535 709 181 9 1 691 1 692 0.0 976
MS.gene006277.t1 MTR_0022s0430 54.751 221 84 4 759 979 653 857 5.00e-58 215
MS.gene006277.t1 MTR_0022s0430 74.310 580 130 4 128 691 1 577 0.0 872
MS.gene006277.t1 MTR_0022s0430 54.751 221 84 4 759 979 538 742 1.12e-58 215
MS.gene006277.t1 MTR_3g115400 42.730 564 281 12 124 667 139 680 4.06e-136 431
MS.gene006277.t1 MTR_3g115400 47.297 74 38 1 886 958 818 891 1.16e-12 72.8
MS.gene006277.t1 MTR_2g099350 39.469 603 317 15 113 696 167 740 2.05e-118 386
MS.gene006277.t1 MTR_2g099350 45.745 94 50 1 884 977 865 957 2.76e-17 87.8
MS.gene006277.t1 MTR_4g068000 40.228 527 291 9 124 645 147 654 4.55e-114 373
MS.gene006277.t1 MTR_4g068000 43.902 82 45 1 885 966 826 906 4.24e-15 80.5
MS.gene006277.t1 MTR_5g099060 35.135 370 180 9 124 478 126 450 1.55e-55 209
MS.gene006277.t1 MTR_5g099060 65.657 99 27 1 564 662 607 698 1.53e-31 133
MS.gene006277.t1 MTR_2g040490 82.667 75 13 0 654 728 39 113 4.54e-34 127
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene006277.t1 AT4G24020 54.803 989 336 23 36 979 36 958 0.0 951
MS.gene006277.t1 AT1G64530 60.057 706 243 15 29 704 5 701 0.0 818
MS.gene006277.t1 AT1G64530 56.436 101 41 2 880 979 738 836 1.33e-27 120
MS.gene006277.t1 AT4G24020 53.898 744 255 19 258 979 1 678 0.0 690
MS.gene006277.t1 AT1G64530 62.454 546 181 9 179 704 5 546 0.0 676
MS.gene006277.t1 AT1G64530 57.576 99 39 2 882 979 585 681 1.41e-27 120
MS.gene006277.t1 AT1G76350 43.894 565 277 12 120 670 103 641 1.45e-137 432
MS.gene006277.t1 AT1G76350 34.286 105 52 2 855 958 698 786 6.41e-12 70.1
MS.gene006277.t1 AT1G76350 43.894 565 277 12 120 670 103 641 1.45e-137 432
MS.gene006277.t1 AT1G76350 34.286 105 52 2 855 958 698 786 6.41e-12 70.1
MS.gene006277.t1 AT1G76350 43.894 565 277 12 120 670 103 641 1.45e-137 432
MS.gene006277.t1 AT1G76350 34.286 105 52 2 855 958 698 786 6.41e-12 70.1
MS.gene006277.t1 AT1G76350 43.894 565 277 12 120 670 103 641 1.45e-137 432
MS.gene006277.t1 AT1G76350 34.286 105 52 2 855 958 698 786 6.41e-12 70.1
MS.gene006277.t1 AT1G20640 42.124 565 299 8 120 668 101 653 1.83e-129 412
MS.gene006277.t1 AT1G20640 42.124 565 299 8 120 668 101 653 1.83e-129 412
MS.gene006277.t1 AT1G20640 42.124 565 299 8 120 668 101 653 1.83e-129 412
MS.gene006277.t1 AT2G17150 39.799 598 292 15 124 673 124 701 4.69e-123 397
MS.gene006277.t1 AT2G17150 43.023 86 45 2 867 951 798 880 5.45e-14 77.0
MS.gene006277.t1 AT2G17150 39.799 598 292 15 124 673 124 701 4.69e-123 397
MS.gene006277.t1 AT2G17150 43.023 86 45 2 867 951 798 880 5.45e-14 77.0
MS.gene006277.t1 AT3G59580 39.548 531 287 9 124 647 106 609 6.79e-116 377
MS.gene006277.t1 AT3G59580 41.837 98 54 3 883 978 792 888 1.06e-15 82.8
MS.gene006277.t1 AT3G59580 39.548 531 287 9 124 647 106 609 6.79e-116 377
MS.gene006277.t1 AT3G59580 41.837 98 54 3 883 978 792 888 1.06e-15 82.8
MS.gene006277.t1 AT3G59580 39.548 531 287 9 124 647 106 609 6.79e-116 377
MS.gene006277.t1 AT3G59580 41.837 98 54 3 883 978 792 888 1.06e-15 82.8
MS.gene006277.t1 AT2G43500 36.661 611 348 10 47 646 81 663 1.06e-115 378
MS.gene006277.t1 AT2G43500 42.708 96 54 1 883 978 834 928 1.40e-18 92.0
MS.gene006277.t1 AT2G43500 36.661 611 348 10 47 646 81 663 1.06e-115 378
MS.gene006277.t1 AT2G43500 42.708 96 54 1 883 978 834 928 1.40e-18 92.0
MS.gene006277.t1 AT2G43500 36.661 611 348 10 47 646 81 663 1.06e-115 378
MS.gene006277.t1 AT2G43500 42.708 96 54 1 883 978 834 928 1.40e-18 92.0
MS.gene006277.t1 AT2G43500 36.661 611 348 10 47 646 81 663 1.06e-115 378
MS.gene006277.t1 AT2G43500 42.708 96 54 1 883 978 834 928 1.40e-18 92.0
MS.gene006277.t1 AT2G43500 36.661 611 348 10 47 646 81 663 1.06e-115 378
MS.gene006277.t1 AT2G43500 42.708 96 54 1 883 978 834 928 1.40e-18 92.0
MS.gene006277.t1 AT2G43500 36.661 611 348 10 47 646 81 663 1.06e-115 378
MS.gene006277.t1 AT2G43500 42.708 96 54 1 883 978 834 928 1.40e-18 92.0
MS.gene006277.t1 AT2G43500 36.661 611 348 10 47 646 81 663 1.06e-115 378
MS.gene006277.t1 AT2G43500 42.708 96 54 1 883 978 834 928 1.40e-18 92.0
MS.gene006277.t1 AT2G43500 36.661 611 348 10 47 646 81 663 1.06e-115 378
MS.gene006277.t1 AT2G43500 42.708 96 54 1 883 978 834 928 1.40e-18 92.0
MS.gene006277.t1 AT2G43500 36.058 624 347 11 47 646 81 676 1.96e-112 369
MS.gene006277.t1 AT2G43500 42.708 96 54 1 883 978 847 941 1.39e-18 92.0
MS.gene006277.t1 AT2G43500 36.058 624 347 11 47 646 81 676 1.96e-112 369
MS.gene006277.t1 AT2G43500 42.708 96 54 1 883 978 847 941 1.39e-18 92.0
MS.gene006277.t1 AT2G43500 35.737 624 349 11 47 646 81 676 3.32e-111 366
MS.gene006277.t1 AT2G43500 42.708 96 54 1 883 978 847 941 1.30e-18 92.0
MS.gene006277.t1 AT4G38340 35.985 528 265 11 124 647 43 501 3.15e-94 314
MS.gene006277.t1 AT4G38340 36.735 98 56 2 870 964 592 686 2.69e-14 77.8
MS.gene006277.t1 AT4G38340 35.795 528 266 12 124 647 114 572 1.95e-93 313
MS.gene006277.t1 AT4G38340 36.735 98 56 2 870 964 663 757 2.96e-14 77.8
MS.gene006277.t1 AT2G17150 36.750 517 269 13 124 595 124 627 4.75e-93 309
MS.gene006277.t1 AT2G17150 36.923 520 267 14 124 595 124 630 1.26e-92 308
MS.gene006277.t1 AT2G17150 36.923 520 267 14 124 595 124 630 1.26e-92 308
MS.gene006277.t1 AT4G35270 40.984 366 202 4 124 485 153 508 6.80e-85 294
MS.gene006277.t1 AT4G35270 60.345 116 39 1 560 675 635 743 5.05e-35 145
MS.gene006277.t1 AT4G35270 43.158 95 51 3 886 978 865 958 1.79e-15 82.0
MS.gene006277.t1 AT4G35270 40.984 366 202 4 124 485 153 508 6.80e-85 294
MS.gene006277.t1 AT4G35270 60.345 116 39 1 560 675 635 743 5.05e-35 145
MS.gene006277.t1 AT4G35270 43.158 95 51 3 886 978 865 958 1.79e-15 82.0
MS.gene006277.t1 AT4G35270 40.984 366 202 4 124 485 153 508 6.80e-85 294
MS.gene006277.t1 AT4G35270 60.345 116 39 1 560 675 635 743 5.05e-35 145
MS.gene006277.t1 AT4G35270 43.158 95 51 3 886 978 865 958 1.79e-15 82.0
MS.gene006277.t1 AT4G35270 40.984 366 202 4 124 485 153 508 6.80e-85 294
MS.gene006277.t1 AT4G35270 60.345 116 39 1 560 675 635 743 5.05e-35 145
MS.gene006277.t1 AT4G35270 43.158 95 51 3 886 978 865 958 1.79e-15 82.0
MS.gene006277.t1 AT2G17150 36.511 493 237 15 257 702 3 466 9.44e-77 265
MS.gene006277.t1 AT2G17150 43.023 86 45 2 867 951 543 625 4.57e-14 77.0

Find 228 sgRNAs with CRISPR-Local

Find 330 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTGCCACCAATAGAAAATT+TGG 0.126044 1.1:-72207639 MS.gene006277:CDS
ATATCGTAGATGCTCATTTA+TGG 0.198226 1.1:-72206410 MS.gene006277:CDS
GTTCATTATGCTCTCATGTT+TGG 0.230421 1.1:-72206258 MS.gene006277:CDS
TTCAGTAGCTGAGGCCATTT+TGG 0.234654 1.1:-72204667 MS.gene006277:CDS
GAGAAGATATCATAAGGTTT+AGG 0.254091 1.1:-72204494 MS.gene006277:CDS
CTGTTTCATTGTTGACAATA+TGG 0.260307 1.1:+72206113 None:intergenic
ACCCGATGCCTCACCAAATA+TGG 0.272048 1.1:-72205950 MS.gene006277:CDS
AACCTCAAGTTTCAATCTTC+TGG 0.273224 1.1:+72204428 None:intergenic
CTTGAGAAAGAAGTGATTAA+TGG 0.295335 1.1:-72205029 MS.gene006277:CDS
TTCATTATGCTCTCATGTTT+GGG 0.297926 1.1:-72206257 MS.gene006277:CDS
CTGTAGGCATAGGAGTGTTT+TGG 0.304108 1.1:-72206523 MS.gene006277:CDS
AGAAGAACATGGTTGTTCTA+TGG 0.308360 1.1:-72208575 MS.gene006277:CDS
AATGAAGACTGTAACTATTA+AGG 0.320892 1.1:-72204526 MS.gene006277:CDS
TGGTAAAGGCGTGACTATTC+AGG 0.321308 1.1:-72205009 MS.gene006277:CDS
AAGTTGTTACCACAAGCTTC+TGG 0.322668 1.1:+72204633 None:intergenic
TATCGTAGATGCTCATTTAT+GGG 0.324285 1.1:-72206409 MS.gene006277:CDS
GAATGTATTGGCTCAGGTTT+GGG 0.327805 1.1:-72207549 MS.gene006277:CDS
CATTGCTGGCTGGACTTATT+CGG 0.328442 1.1:+72205176 None:intergenic
GGAAGCTCCTGTGAGAGTTC+AGG 0.336945 1.1:-72204255 MS.gene006277:CDS
ATGATATCAATGCATTGTTT+AGG 0.337373 1.1:+72204585 None:intergenic
GCCTACAGGGAACCCATGTT+TGG 0.338019 1.1:+72206538 None:intergenic
AAGCAACATAATCCGGGTTT+TGG 0.339808 1.1:-72204301 MS.gene006277:CDS
ATCAACCTTCTTCTCCTCTA+TGG 0.342830 1.1:-72208459 MS.gene006277:CDS
GATTTAATAGATTGAGCAAT+AGG 0.344298 1.1:+72205982 None:intergenic
GTTTGTTTCTGATACTTTAG+AGG 0.346300 1.1:+72205100 None:intergenic
CACAACATGTTGTTCATTGT+TGG 0.348163 1.1:+72204851 None:intergenic
AGCATGTGATGCAGACCTTC+AGG 0.350853 1.1:-72204355 MS.gene006277:CDS
GGCGTGACTATTCAGGAAAT+TGG 0.356009 1.1:-72205002 MS.gene006277:CDS
TTTATGGTTGGAATTTCAAT+TGG 0.358415 1.1:+72204891 None:intergenic
AAATTGGAAAGGACCGAAAA+AGG 0.359121 1.1:-72204986 MS.gene006277:CDS
GCTTGTGGTAACAACTTTCC+AGG 0.361722 1.1:-72204627 MS.gene006277:CDS
AGAAGATATCATAAGGTTTA+GGG 0.363466 1.1:-72204493 MS.gene006277:CDS
TATTGCTTAACGAGCATTGC+TGG 0.371298 1.1:+72205162 None:intergenic
CAGATACGCTTCATTGTAGT+AGG 0.378516 1.1:+72205374 None:intergenic
TTTAGAAACACCATGGCCTT+TGG 0.382797 1.1:-72208539 MS.gene006277:CDS
TGAATGTATTGGCTCAGGTT+TGG 0.382919 1.1:-72207550 MS.gene006277:CDS
TGGAGCCAGATCCTCCAAAA+TGG 0.387883 1.1:+72204653 None:intergenic
TAACACGTTTGAGCTTAGAT+AGG 0.389963 1.1:+72205294 None:intergenic
CTCCATATTTGGTGAGGCAT+CGG 0.392508 1.1:+72205948 None:intergenic
CGGTATGTACTTACAACTTC+AGG 0.393209 1.1:-72207506 MS.gene006277:CDS
CAACATGGTCAAGGTGTTGC+GGG 0.395005 1.1:-72206354 MS.gene006277:CDS
CCGGAGGAAGCAACATAATC+CGG 0.406793 1.1:-72204308 MS.gene006277:CDS
TTATGGTTGGAATTTCAATT+GGG 0.410388 1.1:+72204892 None:intergenic
TTAGAATAGTACAGAACATT+GGG 0.411506 1.1:+72207335 None:intergenic
CTGGACTTATTCGGAGTAGA+AGG 0.413845 1.1:+72205185 None:intergenic
CTTTCCAGGTTCATCACATC+TGG 0.413983 1.1:-72204613 MS.gene006277:CDS
GATGGAACTCTAGGACTTCC+TGG 0.418289 1.1:-72207392 MS.gene006277:CDS
AAATATGGAGGAGGAGGAGG+AGG 0.419910 1.1:-72205935 MS.gene006277:CDS
TGGTCAAGGTGTTGCGGGGA+GGG 0.420611 1.1:-72206349 MS.gene006277:CDS
TGACATGGGATTGGTGATAA+AGG 0.425035 1.1:+72208507 None:intergenic
CCGGATTATGTTGCTTCCTC+CGG 0.426310 1.1:+72204308 None:intergenic
TAAATGAGCATCTACGATAT+AGG 0.426423 1.1:+72206413 None:intergenic
TTTGGTGAGGCATCGGGTCT+AGG 0.427870 1.1:+72205955 None:intergenic
GTTGATCCGATGTCTACCTT+AGG 0.428534 1.1:-72205862 MS.gene006277:CDS
CCTTGCAGGCAGTAAATTTG+AGG 0.428965 1.1:-72206970 MS.gene006277:intron
TCCATATTTGGTGAGGCATC+GGG 0.432185 1.1:+72205949 None:intergenic
GAAGCTCCTGTGAGAGTTCA+GGG 0.444633 1.1:-72204254 MS.gene006277:CDS
GGATGGATATTGTGTAATCA+AGG 0.447561 1.1:-72207618 MS.gene006277:CDS
GCAGAACTTCAAGAGCCGTT+TGG 0.448769 1.1:-72204744 MS.gene006277:CDS
TCAGGAAATGAACTAACAAT+TGG 0.451708 1.1:+72205209 None:intergenic
CCACAGAAAACATGTACATC+AGG 0.453576 1.1:+72207426 None:intergenic
CAGAGTCTTAACATTGCTGC+TGG 0.455084 1.1:-72206084 MS.gene006277:CDS
TTGTTGTCGTCTTTCTCCAC+CGG 0.456133 1.1:+72207680 None:intergenic
AAGTTCTGCTATCACATTGT+CGG 0.456387 1.1:+72204758 None:intergenic
AGGGCGTCAAAATGCATTAT+CGG 0.458489 1.1:-72206613 MS.gene006277:CDS
ACCAAATATGGAGGAGGAGG+AGG 0.458759 1.1:-72205938 MS.gene006277:CDS
TTGAGGGGATCGCCAGAGTC+GGG 0.458933 1.1:-72204828 MS.gene006277:CDS
AGTTCTGCTATCACATTGTC+GGG 0.459703 1.1:+72204759 None:intergenic
CTGCAAGACAGATTACCCTT+TGG 0.463297 1.1:-72206280 MS.gene006277:CDS
CACATTTGATATCAAGTACA+TGG 0.464870 1.1:-72204403 MS.gene006277:CDS
GGAGGAGGAGGGAGTACCAC+AGG 0.466897 1.1:-72205923 MS.gene006277:CDS
CATGACATAACATCAAATCT+TGG 0.469302 1.1:-72204276 MS.gene006277:CDS
AGCAATGCTCGTTAAGCAAT+AGG 0.471004 1.1:-72205160 MS.gene006277:CDS
GCGTTTGATTTGAATTCTCT+TGG 0.473199 1.1:-72205245 MS.gene006277:CDS
CTCTTTGAACTGTGGCATTG+TGG 0.474442 1.1:-72204469 MS.gene006277:CDS
TTAAATCAGATTTGCAATGA+AGG 0.476823 1.1:-72206633 MS.gene006277:intron
CACCTGTGAGGAATGGTAAT+CGG 0.477678 1.1:-72207526 MS.gene006277:CDS
CAAACGCTCCTTCAGCGCCT+TGG 0.478043 1.1:+72205261 None:intergenic
CATGAACAGAAGATGCTGTT+GGG 0.478576 1.1:-72206138 MS.gene006277:CDS
ATTATTGAAGCAACTGATGA+AGG 0.480520 1.1:-72206030 MS.gene006277:CDS
CCTTCGTTGCAGTCATGTAT+TGG 0.482068 1.1:-72207239 MS.gene006277:CDS
GGAGAGAACGATGGAACTCT+AGG 0.486383 1.1:-72207401 MS.gene006277:CDS
GTAATCTGTCTTGCAGAACT+TGG 0.486621 1.1:+72206287 None:intergenic
GGTGTTGAACTCGAGGAAAA+TGG 0.487027 1.1:-72206063 MS.gene006277:CDS
AGAACATTGGGAGACCATTC+TGG 0.493005 1.1:+72207347 None:intergenic
TAAATCAGATTTGCAATGAA+GGG 0.493978 1.1:-72206632 MS.gene006277:intron
GTCCTTGATCCACATAGTAA+TGG 0.494034 1.1:-72207473 MS.gene006277:CDS
TTCAGCAGAAACTACCAGAA+TGG 0.494743 1.1:-72207361 MS.gene006277:CDS
ATTAGAATAGTACAGAACAT+TGG 0.496307 1.1:+72207334 None:intergenic
CCTACAGGGAACCCATGTTT+GGG 0.498512 1.1:+72206539 None:intergenic
TGTAATGTTGAGCATGATCT+CGG 0.498840 1.1:+72207297 None:intergenic
TTTCCACGTTTCCTCTCTGA+GGG 0.500087 1.1:+72205820 None:intergenic
TGAACTGAATGTATTGGCTC+AGG 0.500170 1.1:-72207555 MS.gene006277:CDS
ACATGGACGATGATAATGAA+TGG 0.500704 1.1:-72204386 MS.gene006277:CDS
CATATAGAGAAGATATCATA+AGG 0.502450 1.1:-72204500 MS.gene006277:CDS
CCACCAATAGAAAATTTGGA+TGG 0.502580 1.1:-72207635 MS.gene006277:CDS
TTGAGCAATAGGAATAGATT+CGG 0.502794 1.1:+72205993 None:intergenic
AAAGTCCATAGAGGAGAAGA+AGG 0.508706 1.1:+72208454 None:intergenic
TGGCATGAACCATGAGAAGT+AGG 0.511685 1.1:+72204924 None:intergenic
AAAGAAGTGATTAATGGTAA+AGG 0.511717 1.1:-72205023 MS.gene006277:CDS
ATGTATGTTTCGAGATCATC+CGG 0.512068 1.1:-72204327 MS.gene006277:CDS
TTGATCCGATGTCTACCTTA+GGG 0.513112 1.1:-72205861 MS.gene006277:CDS
TTACAACGTTCGTGGAACCT+TGG 0.514560 1.1:-72207279 MS.gene006277:CDS
TCTTTCATCTGAGGCTCTGA+CGG 0.515877 1.1:+72205137 None:intergenic
TCATGAACAGAAGATGCTGT+TGG 0.516414 1.1:-72206139 MS.gene006277:CDS
TGCAACGAAGGTTCAAATAC+AGG 0.517092 1.1:+72207251 None:intergenic
CAAAACACTCCTATGCCTAC+AGG 0.518113 1.1:+72206524 None:intergenic
CTATCACATTGTCGGGCATA+CGG 0.518485 1.1:+72204766 None:intergenic
GCTTAACGAGCATTGCTGGC+TGG 0.519778 1.1:+72205166 None:intergenic
TCGGGCATACGGTGAGAAGT+TGG 0.519816 1.1:+72204777 None:intergenic
ATTTACCTCTAGCCCAAACA+TGG 0.520347 1.1:-72206551 MS.gene006277:CDS
GGAACCCATGTTTGGGCTAG+AGG 0.520691 1.1:+72206546 None:intergenic
AACAAACATACAGATTGTAA+TGG 0.521216 1.1:-72205084 MS.gene006277:CDS
GATGCTGCAAAGAGCCTTGG+CGG 0.522654 1.1:-72205739 MS.gene006277:intron
AATTCATTCTCTTTCATCTG+AGG 0.523018 1.1:+72205128 None:intergenic
CAGGATCCATCAGAGGTTCA+TGG 0.523226 1.1:-72205904 MS.gene006277:CDS
GCTCAACATTACAACGTTCG+TGG 0.526984 1.1:-72207287 MS.gene006277:CDS
CTATGTGGATCAAGGACAAA+GGG 0.527734 1.1:+72207479 None:intergenic
GTCGGCTGCATTCCCGACTC+TGG 0.528364 1.1:+72204816 None:intergenic
ATGTTGAGCATGATCTCGGC+GGG 0.529020 1.1:+72207301 None:intergenic
AAAGATGCTGCAAAGAGCCT+TGG 0.531341 1.1:-72205742 MS.gene006277:CDS
CATGGACGATGATAATGAAT+GGG 0.531492 1.1:-72204385 MS.gene006277:CDS
CGCTTCGTTACTTCAAAGAG+TGG 0.532079 1.1:-72207580 MS.gene006277:CDS
ATATCAATGCATTGTTTAGG+AGG 0.537877 1.1:+72204588 None:intergenic
GAATCTGTCCAAGGCGCTGA+AGG 0.539465 1.1:-72205269 MS.gene006277:CDS
AGCGTATCTGCAGGCAGCAT+GGG 0.541320 1.1:-72205361 MS.gene006277:CDS
CCAATACATGACTGCAACGA+AGG 0.542039 1.1:+72207239 None:intergenic
GTCCATTACTATGTGGATCA+AGG 0.542097 1.1:+72207471 None:intergenic
CATGGGTTCCCTGTAGGCAT+AGG 0.542933 1.1:-72206533 MS.gene006277:CDS
GAGGTTCATGGTGAAAATGT+AGG 0.543377 1.1:-72205892 MS.gene006277:CDS
CTCACCAAATATGGAGGAGG+AGG 0.544347 1.1:-72205941 MS.gene006277:CDS
TAAAAGAAACTCAACCTCTA+GGG 0.545210 1.1:+72207148 None:intergenic
AACACGTTTGAGCTTAGATA+GGG 0.545296 1.1:+72205295 None:intergenic
ATCGTAGATGCTCATTTATG+GGG 0.545393 1.1:-72206408 MS.gene006277:CDS
CTACAATGAAGCGTATCTGC+AGG 0.545803 1.1:-72205370 MS.gene006277:CDS
GAACTTCAAGAGCCGTTTGG+AGG 0.546170 1.1:-72204741 MS.gene006277:CDS
GTTTGGAGGATTGCTAATAG+AGG 0.548683 1.1:-72204727 MS.gene006277:CDS
GTGGACTGAACTGAATGTAT+TGG 0.548852 1.1:-72207561 MS.gene006277:CDS
GGAGAGTTTAAAGCATTAGT+CGG 0.550784 1.1:+72204798 None:intergenic
ACAACATGGTCAAGGTGTTG+CGG 0.552963 1.1:-72206355 MS.gene006277:CDS
GTAATGGAAAATCAATTGCT+AGG 0.555652 1.1:-72205068 MS.gene006277:CDS
AGAAGATTGAAACTTGAGGT+TGG 0.556154 1.1:-72204426 MS.gene006277:CDS
AAATTCAATAACTGAGAAGC+CGG 0.559695 1.1:-72207699 MS.gene006277:CDS
TCTATTAGCAATCCTCCAAA+CGG 0.561122 1.1:+72204729 None:intergenic
AAGCGTATCTGCAGGCAGCA+TGG 0.561590 1.1:-72205362 MS.gene006277:CDS
CTCCTCCTCCATATTTGGTG+AGG 0.561991 1.1:+72205942 None:intergenic
AGCACAAACCCTACTTCTCA+TGG 0.568994 1.1:-72204933 MS.gene006277:CDS
TGAACAACATGTTGTGTTGA+GGG 0.569993 1.1:-72204844 MS.gene006277:CDS
ACATGTTGTTCATTGTTGGA+TGG 0.570109 1.1:+72204855 None:intergenic
TTATTCGGAGTAGAAGGCTC+AGG 0.570221 1.1:+72205191 None:intergenic
GGAGCCAGATGTGATGAACC+TGG 0.570260 1.1:+72204609 None:intergenic
TCTATTGGTGGCAAAAGGGG+TGG 0.571210 1.1:+72207647 None:intergenic
ATGGTCAAGGTGTTGCGGGG+AGG 0.571632 1.1:-72206350 MS.gene006277:CDS
CGGAGGAAGCAACATAATCC+GGG 0.572590 1.1:-72204307 MS.gene006277:CDS
TTCCAGAAGATTGAAACTTG+AGG 0.573036 1.1:-72204430 MS.gene006277:CDS
TTCAAATACAGGCAAAGCCA+AGG 0.574356 1.1:+72207262 None:intergenic
ATGAGAGCATAATGAACCAA+AGG 0.574665 1.1:+72206264 None:intergenic
CCCAAACATGGGTTCCCTGT+AGG 0.575392 1.1:-72206539 MS.gene006277:CDS
AAAATACCTGAGTGAATGGA+TGG 0.576234 1.1:+72206930 None:intergenic
TCACTCCCCTGAACTCTCAC+AGG 0.578779 1.1:+72204248 None:intergenic
ACCTTGTTAATCTTTCGAGA+TGG 0.579070 1.1:+72205326 None:intergenic
AAAATGGCCTCAGCTACTGA+AGG 0.579468 1.1:+72204669 None:intergenic
TTATGTCATGCACCAAAACC+CGG 0.579981 1.1:+72204289 None:intergenic
TGAGAGCATAATGAACCAAA+GGG 0.580200 1.1:+72206265 None:intergenic
GTTGAGGGGATCGCCAGAGT+CGG 0.581271 1.1:-72204829 MS.gene006277:CDS
TTTGGACCATCCATTCACTC+AGG 0.581838 1.1:-72206936 MS.gene006277:intron
CTCAGGTTTGGGCACCTGTG+AGG 0.583880 1.1:-72207538 MS.gene006277:CDS
TGCCTCACCAAATATGGAGG+AGG 0.587748 1.1:-72205944 MS.gene006277:CDS
AAACATACATGCACTCCTGA+AGG 0.588299 1.1:+72204340 None:intergenic
GTTTGGGCACCTGTGAGGAA+TGG 0.588324 1.1:-72207533 MS.gene006277:CDS
GACATGTGATCCAAAGGCCA+TGG 0.591421 1.1:+72208529 None:intergenic
AAAACACTCCTATGCCTACA+GGG 0.592526 1.1:+72206525 None:intergenic
ACTTCTCATGGTTCATGCCA+CGG 0.596610 1.1:-72204921 MS.gene006277:CDS
AAAATCAATTGCTAGGAGGA+AGG 0.596853 1.1:-72205061 MS.gene006277:CDS
TATGGTTGGAATTTCAATTG+GGG 0.600606 1.1:+72204893 None:intergenic
TTATTCCCTAAGGTAGACAT+CGG 0.604395 1.1:+72205856 None:intergenic
TGCTGCTGGTGTTGAACTCG+AGG 0.610461 1.1:-72206070 MS.gene006277:CDS
CGTGTTATTGAATCTGTCCA+AGG 0.611341 1.1:-72205278 MS.gene006277:CDS
GTTTGAGCTTAGATAGGGAA+CGG 0.611978 1.1:+72205300 None:intergenic
GGCAGCATGGGATATCTCGT+TGG 0.612803 1.1:-72205349 MS.gene006277:CDS
TTTAGGGTCTCTTTGAACTG+TGG 0.613295 1.1:-72204477 MS.gene006277:CDS
TCATGAAATTCAGTAATCCC+AGG 0.614579 1.1:+72206156 None:intergenic
ATGGTTGGAATTTCAATTGG+GGG 0.615940 1.1:+72204894 None:intergenic
CACAGAAAACATGTACATCA+GGG 0.616371 1.1:+72207427 None:intergenic
ATAAAGGACATGTGATCCAA+AGG 0.617226 1.1:+72208523 None:intergenic
GACTATTCAGGAAATTGGAA+AGG 0.619669 1.1:-72204997 MS.gene006277:CDS
ATCTAGATTTAGAAACACCA+TGG 0.622079 1.1:-72208546 MS.gene006277:CDS
CCATCAGTAAAAGTCCATAG+AGG 0.625976 1.1:+72208445 None:intergenic
AGAGTATGAACGTACCGCCA+AGG 0.629334 1.1:+72205725 None:intergenic
TACCGATTACCATTCCTCAC+AGG 0.629926 1.1:+72207524 None:intergenic
ACTATGTGGATCAAGGACAA+AGG 0.631383 1.1:+72207478 None:intergenic
AAAGATTAACTATGCTCCTG+AGG 0.633444 1.1:-72207189 MS.gene006277:CDS
TTTGTGCCCTTCAGTAGCTG+AGG 0.634116 1.1:-72204676 MS.gene006277:CDS
TTCAATAACTGAGAAGCCGG+TGG 0.635214 1.1:-72207696 MS.gene006277:CDS
GGCATGAACCATGAGAAGTA+GGG 0.635585 1.1:+72204925 None:intergenic
ACATACAAGAGAAGATCTTG+TGG 0.635928 1.1:+72208383 None:intergenic
AGATACGCTTCATTGTAGTA+GGG 0.641314 1.1:+72205375 None:intergenic
AGTGTGCATGTCTACAACTG+AGG 0.643299 1.1:-72206442 MS.gene006277:CDS
TGATTGAGTCCATTACTATG+TGG 0.646033 1.1:+72207464 None:intergenic
TCATTGTTGGATGGAATGAA+CGG 0.648544 1.1:+72204864 None:intergenic
CGATGCCTCACCAAATATGG+AGG 0.650921 1.1:-72205947 MS.gene006277:CDS
AAAAGGAATAGAACTAGGAG+TGG 0.652567 1.1:-72204969 MS.gene006277:CDS
TTTACCTCTAGCCCAAACAT+GGG 0.653751 1.1:-72206550 MS.gene006277:CDS
ATGAACAACATGTTGTGTTG+AGG 0.654614 1.1:-72204845 MS.gene006277:CDS
TGGACTCAATCAGTATAGAA+CGG 0.656345 1.1:-72207453 MS.gene006277:CDS
AAATGGCCTCAGCTACTGAA+GGG 0.658026 1.1:+72204670 None:intergenic
GGTGAGGCATCGGGTCTAGG+TGG 0.659977 1.1:+72205958 None:intergenic
ATGGAAAATCAATTGCTAGG+AGG 0.664194 1.1:-72205065 MS.gene006277:CDS
AAACCCTCAGAGAGGAAACG+TGG 0.667434 1.1:-72205823 MS.gene006277:CDS
GTGCATGTCTACAACTGAGG+CGG 0.669875 1.1:-72206439 MS.gene006277:CDS
AACATGGTCAAGGTGTTGCG+GGG 0.672343 1.1:-72206353 MS.gene006277:CDS
GTCGAACATCACTTACAACA+TGG 0.677843 1.1:-72206369 MS.gene006277:CDS
GATCTTAGAGATATTGACAG+TGG 0.683127 1.1:-72206589 MS.gene006277:CDS
AAAACATCATTAGAAGAACA+TGG 0.686020 1.1:-72208586 MS.gene006277:CDS
GCCATCTCGAAAGATTAACA+AGG 0.686233 1.1:-72205327 MS.gene006277:CDS
GATCTGGCTCCAGAAGCTTG+TGG 0.687276 1.1:-72204642 MS.gene006277:CDS
AATGTTGAGCATGATCTCGG+CGG 0.687474 1.1:+72207300 None:intergenic
CATCACTTACAACATGGTCA+AGG 0.693887 1.1:-72206363 MS.gene006277:CDS
TCTGTGGATGGAGAGAACGA+TGG 0.695263 1.1:-72207410 MS.gene006277:CDS
AGTACCACAGGATCCATCAG+AGG 0.699060 1.1:-72205911 MS.gene006277:CDS
ACATAAAGAAACCCTCAGAG+AGG 0.705928 1.1:-72205831 MS.gene006277:CDS
TGAACCTCTGATGGATCCTG+TGG 0.708138 1.1:+72205907 None:intergenic
AAGCTCCTGTGAGAGTTCAG+GGG 0.712104 1.1:-72204253 MS.gene006277:CDS
GGATTGCTAATAGAGGACGC+TGG 0.717922 1.1:-72204720 MS.gene006277:CDS
TGTTGAGCATGATCTCGGCG+GGG 0.718991 1.1:+72207302 None:intergenic
GAACAACATGTTGTGTTGAG+GGG 0.732713 1.1:-72204843 MS.gene006277:CDS
TGAAATTCAGTAATCCCAGG+AGG 0.744471 1.1:+72206159 None:intergenic
TATGTTTCGAGATCATCCGG+AGG 0.758424 1.1:-72204324 MS.gene006277:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GAATTATAAAATGTTAATAT+TGG + chr1.1:72207241-72207260 None:intergenic 10.0%
!!! TTTTTATTTTTAGAGTTTAA+TGG - chr1.1:72205968-72205987 MS.gene006277:CDS 10.0%
!! ATAAACTCATTATACATTAA+GGG + chr1.1:72204692-72204711 None:intergenic 15.0%
!! TAAAAATAATTGGAAAATAC+TGG - chr1.1:72206080-72206099 MS.gene006277:CDS 15.0%
!! TATAAACTCATTATACATTA+AGG + chr1.1:72204693-72204712 None:intergenic 15.0%
!!! AACTGCATTTTAAAAATAAT+TGG - chr1.1:72206070-72206089 MS.gene006277:CDS 15.0%
!!! ATGATTTTTGAGTATTTATA+AGG - chr1.1:72204990-72205009 MS.gene006277:CDS 15.0%
!! ATAAGAAAACCATAAAACTT+AGG + chr1.1:72205771-72205790 None:intergenic 20.0%
!! ATACATGATAAAAACAAATC+AGG + chr1.1:72206137-72206156 None:intergenic 20.0%
!!! ATTTTATACCAAGTTTTCAA+TGG - chr1.1:72205828-72205847 MS.gene006277:CDS 20.0%
!!! TTATTTTTAGAGTTTAATGG+AGG - chr1.1:72205971-72205990 MS.gene006277:CDS 20.0%
!!! TTTAAAATGCAGTTACAAAT+AGG + chr1.1:72206064-72206083 None:intergenic 20.0%
!!! TTTTATGGTTTTCTTATGTT+TGG - chr1.1:72205774-72205793 MS.gene006277:CDS 20.0%
! AAAACATCATTAGAAGAACA+TGG - chr1.1:72204293-72204312 MS.gene006277:CDS 25.0%
! AAAGAAGTGATTAATGGTAA+AGG - chr1.1:72207856-72207875 MS.gene006277:intron 25.0%
! AACAAACATACAGATTGTAA+TGG - chr1.1:72207795-72207814 MS.gene006277:intron 25.0%
! AATAAAAATACCTGAGTGAA+TGG + chr1.1:72205956-72205975 None:intergenic 25.0%
! AATGAAGACTGTAACTATTA+AGG - chr1.1:72208353-72208372 MS.gene006277:intron 25.0%
! AGAAGATATCATAAGGTTTA+GGG - chr1.1:72208386-72208405 MS.gene006277:intron 25.0%
! ATGATATCAATGCATTGTTT+AGG + chr1.1:72208297-72208316 None:intergenic 25.0%
! ATTAGAATAGTACAGAACAT+TGG + chr1.1:72205548-72205567 None:intergenic 25.0%
! ATTATCTAGATATAACAGAC+TGG + chr1.1:72206168-72206187 None:intergenic 25.0%
! CAACATTCACAAGTAAAATT+AGG + chr1.1:72204720-72204739 None:intergenic 25.0%
! CATATAGAGAAGATATCATA+AGG - chr1.1:72208379-72208398 MS.gene006277:intron 25.0%
! GAGATGTTTGAAAACAAAAA+AGG + chr1.1:72204398-72204417 None:intergenic 25.0%
! GATTTAATAGATTGAGCAAT+AGG + chr1.1:72206900-72206919 None:intergenic 25.0%
! TAAATCAGATTTGCAATGAA+GGG - chr1.1:72206247-72206266 MS.gene006277:CDS 25.0%
! TAATCTTCAAATACTGTAGT+AGG + chr1.1:72204792-72204811 None:intergenic 25.0%
! TTAAATCAGATTTGCAATGA+AGG - chr1.1:72206246-72206265 MS.gene006277:CDS 25.0%
! TTAGAATAGTACAGAACATT+GGG + chr1.1:72205547-72205566 None:intergenic 25.0%
! TTATCTAGATATAACAGACT+GGG + chr1.1:72206167-72206186 None:intergenic 25.0%
! TTATGGTTGGAATTTCAATT+GGG + chr1.1:72207990-72208009 None:intergenic 25.0%
! TTTATGGTTGGAATTTCAAT+TGG + chr1.1:72207991-72208010 None:intergenic 25.0%
!! CTAATTTTACTTGTGAATGT+TGG - chr1.1:72204718-72204737 MS.gene006277:CDS 25.0%
!! TATCCATCCAAATTTTCTAT+TGG + chr1.1:72205250-72205269 None:intergenic 25.0%
!!! CTTTATGTTTTTATTCCCTA+AGG + chr1.1:72207036-72207055 None:intergenic 25.0%
!!! TCTAATGATGTTTTTGTCTT+GGG + chr1.1:72204287-72204306 None:intergenic 25.0%
!!! TTCTAATGATGTTTTTGTCT+TGG + chr1.1:72204288-72204307 None:intergenic 25.0%
AAATTCAATAACTGAGAAGC+CGG - chr1.1:72205180-72205199 MS.gene006277:CDS 30.0%
AATTCATTCTCTTTCATCTG+AGG + chr1.1:72207754-72207773 None:intergenic 30.0%
ACTGGATTATGAAAACTTCA+CGG + chr1.1:72205070-72205089 None:intergenic 30.0%
ATATCAATGCATTGTTTAGG+AGG + chr1.1:72208294-72208313 None:intergenic 30.0%
ATATCGTAGATGCTCATTTA+TGG - chr1.1:72206469-72206488 MS.gene006277:CDS 30.0%
ATCTAGATTTAGAAACACCA+TGG - chr1.1:72204333-72204352 MS.gene006277:CDS 30.0%
ATGTAGCATGTACTTGTATA+AGG + chr1.1:72204962-72204981 None:intergenic 30.0%
ATTATTGAAGCAACTGATGA+AGG - chr1.1:72206849-72206868 MS.gene006277:intron 30.0%
CACATTTGATATCAAGTACA+TGG - chr1.1:72208476-72208495 MS.gene006277:CDS 30.0%
CATGACATAACATCAAATCT+TGG - chr1.1:72208603-72208622 MS.gene006277:CDS 30.0%
CGATTACGTAATACATTCTT+CGG + chr1.1:72207358-72207377 None:intergenic 30.0%
CTGTTTCATTGTTGACAATA+TGG + chr1.1:72206769-72206788 None:intergenic 30.0%
CTTGAGAAAGAAGTGATTAA+TGG - chr1.1:72207850-72207869 MS.gene006277:intron 30.0%
GAAAACAAAAAAGGTGACAT+GGG + chr1.1:72204389-72204408 None:intergenic 30.0%
GAGAAGATATCATAAGGTTT+AGG - chr1.1:72208385-72208404 MS.gene006277:intron 30.0%
TAAAAGAAACTCAACCTCTA+GGG + chr1.1:72205734-72205753 None:intergenic 30.0%
TAAATGAGCATCTACGATAT+AGG + chr1.1:72206469-72206488 None:intergenic 30.0%
TATCGTAGATGCTCATTTAT+GGG - chr1.1:72206470-72206489 MS.gene006277:CDS 30.0%
TATGGTTGGAATTTCAATTG+GGG + chr1.1:72207989-72208008 None:intergenic 30.0%
TCAGGAAATGAACTAACAAT+TGG + chr1.1:72207673-72207692 None:intergenic 30.0%
TGAAAACAAAAAAGGTGACA+TGG + chr1.1:72204390-72204409 None:intergenic 30.0%
TGCGTTGTTAATTATGTAGA+AGG - chr1.1:72204823-72204842 MS.gene006277:CDS 30.0%
TTAAAAGAAACTCAACCTCT+AGG + chr1.1:72205735-72205754 None:intergenic 30.0%
TTCATTATGCTCTCATGTTT+GGG - chr1.1:72206622-72206641 MS.gene006277:CDS 30.0%
TTGAGCAATAGGAATAGATT+CGG + chr1.1:72206889-72206908 None:intergenic 30.0%
TTTGCCACCAATAGAAAATT+TGG - chr1.1:72205240-72205259 MS.gene006277:CDS 30.0%
! CATGTATTTTGCAGTTTATG+TGG - chr1.1:72205111-72205130 MS.gene006277:CDS 30.0%
! GCAATCTATCCTAAGTTTTA+TGG - chr1.1:72205759-72205778 MS.gene006277:CDS 30.0%
! GTAATGGAAAATCAATTGCT+AGG - chr1.1:72207811-72207830 MS.gene006277:intron 30.0%
!! AAAAGTTGTTCGAGTTTTGA+TGG - chr1.1:72206399-72206418 MS.gene006277:CDS 30.0%
!! AACTAAAGCTACTGTTTTTC+AGG - chr1.1:72205151-72205170 MS.gene006277:CDS 30.0%
!! AATTTTCTATTGGTGGCAAA+AGG + chr1.1:72205240-72205259 None:intergenic 30.0%
!! ATTTTCTATTGGTGGCAAAA+GGG + chr1.1:72205239-72205258 None:intergenic 30.0%
!! GTTTGTTTCTGATACTTTAG+AGG + chr1.1:72207782-72207801 None:intergenic 30.0%
!! TAGCTTTAACACAAACTTCT+TGG - chr1.1:72207458-72207477 MS.gene006277:CDS 30.0%
!! TTCTACAACGTTATTTTGCT+GGG - chr1.1:72207108-72207127 MS.gene006277:intron 30.0%
!! TTTACAAATTTGCTGCTATC+TGG - chr1.1:72207319-72207338 MS.gene006277:CDS 30.0%
!!! ATTTCTTTTCTAGCTGCAAA+AGG + chr1.1:72208336-72208355 None:intergenic 30.0%
!!! TCCTAGTTCTATTCCTTTTT+CGG + chr1.1:72207909-72207928 None:intergenic 30.0%
AAAAGGAATAGAACTAGGAG+TGG - chr1.1:72207910-72207929 MS.gene006277:intron 35.0%
AAAATACCTGAGTGAATGGA+TGG + chr1.1:72205952-72205971 None:intergenic 35.0%
AAAATCAATTGCTAGGAGGA+AGG - chr1.1:72207818-72207837 MS.gene006277:intron 35.0%
AAACCAAAAGCAGATCATTG+AGG + chr1.1:72205889-72205908 None:intergenic 35.0%
AAAGATTAACTATGCTCCTG+AGG - chr1.1:72205690-72205709 MS.gene006277:intron 35.0%
AAATTGGAAAGGACCGAAAA+AGG - chr1.1:72207893-72207912 MS.gene006277:intron 35.0%
AACACGTTTGAGCTTAGATA+GGG + chr1.1:72207587-72207606 None:intergenic 35.0%
AACCTCAAGTTTCAATCTTC+TGG + chr1.1:72208454-72208473 None:intergenic 35.0%
AAGTTCTGCTATCACATTGT+CGG + chr1.1:72208124-72208143 None:intergenic 35.0%
AATCTCTGCCATTGAAAACT+TGG + chr1.1:72205839-72205858 None:intergenic 35.0%
ACATACAAGAGAAGATCTTG+TGG + chr1.1:72204499-72204518 None:intergenic 35.0%
ACATGCATACTCTACTACAA+TGG - chr1.1:72207272-72207291 MS.gene006277:CDS 35.0%
ACATGTTGTTCATTGTTGGA+TGG + chr1.1:72208027-72208046 None:intergenic 35.0%
ACCGAAAAAGGAATAGAACT+AGG - chr1.1:72207905-72207924 MS.gene006277:intron 35.0%
ACCTTGTTAATCTTTCGAGA+TGG + chr1.1:72207556-72207575 None:intergenic 35.0%
AGAAGAACATGGTTGTTCTA+TGG - chr1.1:72204304-72204323 MS.gene006277:CDS 35.0%
AGAAGATTGAAACTTGAGGT+TGG - chr1.1:72208453-72208472 MS.gene006277:CDS 35.0%
AGATACGCTTCATTGTAGTA+GGG + chr1.1:72207507-72207526 None:intergenic 35.0%
ATAAAGGACATGTGATCCAA+AGG + chr1.1:72204359-72204378 None:intergenic 35.0%
ATCGTAGATGCTCATTTATG+GGG - chr1.1:72206471-72206490 MS.gene006277:CDS 35.0%
ATGAACAACATGTTGTGTTG+AGG - chr1.1:72208034-72208053 MS.gene006277:intron 35.0%
ATGGAAAATCAATTGCTAGG+AGG - chr1.1:72207814-72207833 MS.gene006277:intron 35.0%
ATGGTTGGAATTTCAATTGG+GGG + chr1.1:72207988-72208007 None:intergenic 35.0%
ATGTATGTTTCGAGATCATC+CGG - chr1.1:72208552-72208571 MS.gene006277:CDS 35.0%
ATTGAACAGCTGAAGTTTCA+TGG - chr1.1:72204892-72204911 MS.gene006277:CDS 35.0%
CACAACATGTTGTTCATTGT+TGG + chr1.1:72208031-72208050 None:intergenic 35.0%
CACAGAAAACATGTACATCA+GGG + chr1.1:72205455-72205474 None:intergenic 35.0%
CAGCTGTTCAATTTAGAAGA+GGG + chr1.1:72204884-72204903 None:intergenic 35.0%
CATTGCCAAGTTATATCTGT+GGG + chr1.1:72206223-72206242 None:intergenic 35.0%
CCACCAATAGAAAATTTGGA+TGG - chr1.1:72205244-72205263 MS.gene006277:CDS 35.0%
GACTATTCAGGAAATTGGAA+AGG - chr1.1:72207882-72207901 MS.gene006277:intron 35.0%
GATCTTAGAGATATTGACAG+TGG - chr1.1:72206290-72206309 MS.gene006277:CDS 35.0%
GGAAAATACTGGATTCTCAT+TGG - chr1.1:72206091-72206110 MS.gene006277:CDS 35.0%
GGATGGATATTGTGTAATCA+AGG - chr1.1:72205261-72205280 MS.gene006277:CDS 35.0%
GTTCATTATGCTCTCATGTT+TGG - chr1.1:72206621-72206640 MS.gene006277:CDS 35.0%
TAACACGTTTGAGCTTAGAT+AGG + chr1.1:72207588-72207607 None:intergenic 35.0%
TCAGCTGTTCAATTTAGAAG+AGG + chr1.1:72204885-72204904 None:intergenic 35.0%
TCATGAAATTCAGTAATCCC+AGG + chr1.1:72206726-72206745 None:intergenic 35.0%
TCATTGTTGGATGGAATGAA+CGG + chr1.1:72208018-72208037 None:intergenic 35.0%
TCTATTAGCAATCCTCCAAA+CGG + chr1.1:72208153-72208172 None:intergenic 35.0%
TGAACAACATGTTGTGTTGA+GGG - chr1.1:72208035-72208054 MS.gene006277:intron 35.0%
TGATTGAGTCCATTACTATG+TGG + chr1.1:72205418-72205437 None:intergenic 35.0%
TGGACTCAATCAGTATAGAA+CGG - chr1.1:72205426-72205445 MS.gene006277:intron 35.0%
TGTAATGTTGAGCATGATCT+CGG + chr1.1:72205585-72205604 None:intergenic 35.0%
TTATTCCCTAAGGTAGACAT+CGG + chr1.1:72207026-72207045 None:intergenic 35.0%
TTCCAGAAGATTGAAACTTG+AGG - chr1.1:72208449-72208468 MS.gene006277:CDS 35.0%
TTTATTAATCTGCTGCTAGC+TGG - chr1.1:72207203-72207222 MS.gene006277:CDS 35.0%
! AAGTCTTGATTTTCTTCCTC+AGG + chr1.1:72204260-72204279 None:intergenic 35.0%
! ACATGGACGATGATAATGAA+TGG - chr1.1:72208493-72208512 MS.gene006277:CDS 35.0%
! ACTTTTACTGATGGAGAAGA+TGG - chr1.1:72204443-72204462 MS.gene006277:CDS 35.0%
! ATGAACGGATCTTTTATGGT+TGG + chr1.1:72208003-72208022 None:intergenic 35.0%
! ATGAGAGCATAATGAACCAA+AGG + chr1.1:72206618-72206637 None:intergenic 35.0%
! ATGTACATGTTTTCTGTGGA+TGG - chr1.1:72205457-72205476 MS.gene006277:intron 35.0%
! ATTCCTCAATGATCTGCTTT+TGG - chr1.1:72205883-72205902 MS.gene006277:CDS 35.0%
! CATGGACGATGATAATGAAT+GGG - chr1.1:72208494-72208513 MS.gene006277:CDS 35.0%
! CCATCCAAATTTTCTATTGG+TGG + chr1.1:72205247-72205266 None:intergenic 35.0%
! GGAGAGTTTAAAGCATTAGT+CGG + chr1.1:72208084-72208103 None:intergenic 35.0%
! TGAGAGCATAATGAACCAAA+GGG + chr1.1:72206617-72206636 None:intergenic 35.0%
! TGGAATGAACGGATCTTTTA+TGG + chr1.1:72208007-72208026 None:intergenic 35.0%
!! AATGATGTTTTTGTCTTGGG+AGG + chr1.1:72204284-72204303 None:intergenic 35.0%
!! AGTTTTGATGGTAGTTGCAT+GGG - chr1.1:72206411-72206430 MS.gene006277:CDS 35.0%
!! GCGTTTGATTTGAATTCTCT+TGG - chr1.1:72207634-72207653 MS.gene006277:CDS 35.0%
!! GTTCTACAACGTTATTTTGC+TGG - chr1.1:72207107-72207126 MS.gene006277:intron 35.0%
!! TTTTCTATTGGTGGCAAAAG+GGG + chr1.1:72205238-72205257 None:intergenic 35.0%
!!! TTGCAGATTTTTTCAACCTC+AGG + chr1.1:72205709-72205728 None:intergenic 35.0%
AAAAATCTGCAAAGCCCTAG+AGG - chr1.1:72205717-72205736 MS.gene006277:intron 40.0%
AAAACACTCCTATGCCTACA+GGG + chr1.1:72206357-72206376 None:intergenic 40.0%
AAACATACATGCACTCCTGA+AGG + chr1.1:72208542-72208561 None:intergenic 40.0%
AAAGTCCATAGAGGAGAAGA+AGG + chr1.1:72204428-72204447 None:intergenic 40.0%
ACATAAAGAAACCCTCAGAG+AGG - chr1.1:72207048-72207067 MS.gene006277:intron 40.0%
ACTATGTGGATCAAGGACAA+AGG + chr1.1:72205404-72205423 None:intergenic 40.0%
ACTGGATTCTCATTGGATGT+TGG - chr1.1:72206098-72206117 MS.gene006277:CDS 40.0%
AGCAATGCTCGTTAAGCAAT+AGG - chr1.1:72207719-72207738 MS.gene006277:intron 40.0%
AGTTATATCTGTGGGAATCC+AGG + chr1.1:72206215-72206234 None:intergenic 40.0%
AGTTCTGCTATCACATTGTC+GGG + chr1.1:72208123-72208142 None:intergenic 40.0%
ATCAACCTTCTTCTCCTCTA+TGG - chr1.1:72204420-72204439 MS.gene006277:CDS 40.0%
ATTTACCTCTAGCCCAAACA+TGG - chr1.1:72206328-72206347 MS.gene006277:CDS 40.0%
CAAAAAAGGTGACATGGGAT+TGG + chr1.1:72204384-72204403 None:intergenic 40.0%
CAAGTGTGAATCATTGTCAC+TGG + chr1.1:72206032-72206051 None:intergenic 40.0%
CAGATACGCTTCATTGTAGT+AGG + chr1.1:72207508-72207527 None:intergenic 40.0%
CATCACTTACAACATGGTCA+AGG - chr1.1:72206516-72206535 MS.gene006277:CDS 40.0%
CATGAACAGAAGATGCTGTT+GGG - chr1.1:72206741-72206760 MS.gene006277:intron 40.0%
CCACAGAAAACATGTACATC+AGG + chr1.1:72205456-72205475 None:intergenic 40.0%
CCATCAGTAAAAGTCCATAG+AGG + chr1.1:72204437-72204456 None:intergenic 40.0%
CGGTATGTACTTACAACTTC+AGG - chr1.1:72205373-72205392 MS.gene006277:CDS 40.0%
CTATGTGGATCAAGGACAAA+GGG + chr1.1:72205403-72205422 None:intergenic 40.0%
GAACAACATGTTGTGTTGAG+GGG - chr1.1:72208036-72208055 MS.gene006277:intron 40.0%
GAGGTTCATGGTGAAAATGT+AGG - chr1.1:72206987-72207006 MS.gene006277:intron 40.0%
GCATTGCCAAGTTATATCTG+TGG + chr1.1:72206224-72206243 None:intergenic 40.0%
GCCATCTCGAAAGATTAACA+AGG - chr1.1:72207552-72207571 MS.gene006277:CDS 40.0%
GGATTCCCACAGATATAACT+TGG - chr1.1:72206215-72206234 MS.gene006277:CDS 40.0%
GTAATCTGTCTTGCAGAACT+TGG + chr1.1:72206595-72206614 None:intergenic 40.0%
GTCCATTACTATGTGGATCA+AGG + chr1.1:72205411-72205430 None:intergenic 40.0%
GTCCTTGATCCACATAGTAA+TGG - chr1.1:72205406-72205425 MS.gene006277:intron 40.0%
GTCGAACATCACTTACAACA+TGG - chr1.1:72206510-72206529 MS.gene006277:CDS 40.0%
GTTATATCTGTGGGAATCCA+GGG + chr1.1:72206214-72206233 None:intergenic 40.0%
GTTTGAGCTTAGATAGGGAA+CGG + chr1.1:72207582-72207601 None:intergenic 40.0%
GTTTGGAGGATTGCTAATAG+AGG - chr1.1:72208152-72208171 MS.gene006277:intron 40.0%
TAATCCAGTCCAATGTCATG+TGG - chr1.1:72205081-72205100 MS.gene006277:CDS 40.0%
TCATGAACAGAAGATGCTGT+TGG - chr1.1:72206740-72206759 MS.gene006277:intron 40.0%
TGAAATTCAGTAATCCCAGG+AGG + chr1.1:72206723-72206742 None:intergenic 40.0%
TGCAACGAAGGTTCAAATAC+AGG + chr1.1:72205631-72205650 None:intergenic 40.0%
TGCCTGGTAATTGCTTTCTT+GGG - chr1.1:72204930-72204949 MS.gene006277:CDS 40.0%
TGTTTAGCACCACATGACAT+TGG + chr1.1:72205093-72205112 None:intergenic 40.0%
TTATATCTGTGGGAATCCAG+GGG + chr1.1:72206213-72206232 None:intergenic 40.0%
TTATGTCATGCACCAAAACC+CGG + chr1.1:72208593-72208612 None:intergenic 40.0%
TTCAAATACAGGCAAAGCCA+AGG + chr1.1:72205620-72205639 None:intergenic 40.0%
TTCAGCAGAAACTACCAGAA+TGG - chr1.1:72205518-72205537 MS.gene006277:intron 40.0%
TTGATCCGATGTCTACCTTA+GGG - chr1.1:72207018-72207037 MS.gene006277:intron 40.0%
TTGCCTGGTAATTGCTTTCT+TGG - chr1.1:72204929-72204948 MS.gene006277:CDS 40.0%
TTTACCTCTAGCCCAAACAT+GGG - chr1.1:72206329-72206348 MS.gene006277:CDS 40.0%
TTTAGAAACACCATGGCCTT+TGG - chr1.1:72204340-72204359 MS.gene006277:CDS 40.0%
! AAGCAACATAATCCGGGTTT+TGG - chr1.1:72208578-72208597 MS.gene006277:CDS 40.0%
! AGGGCGTCAAAATGCATTAT+CGG - chr1.1:72206266-72206285 MS.gene006277:CDS 40.0%
! CCTCTATGGACTTTTACTGA+TGG - chr1.1:72204434-72204453 MS.gene006277:CDS 40.0%
! CCTGATGTACATGTTTTCTG+TGG - chr1.1:72205453-72205472 MS.gene006277:intron 40.0%
! CGTGTTATTGAATCTGTCCA+AGG - chr1.1:72207601-72207620 MS.gene006277:CDS 40.0%
! CTACAATGGAGTGCATCTTT+TGG - chr1.1:72207286-72207305 MS.gene006277:CDS 40.0%
! GTGGACTGAACTGAATGTAT+TGG - chr1.1:72205318-72205337 MS.gene006277:CDS 40.0%
! TATTGCTTAACGAGCATTGC+TGG + chr1.1:72207720-72207739 None:intergenic 40.0%
! TGACATGGGATTGGTGATAA+AGG + chr1.1:72204375-72204394 None:intergenic 40.0%
! TGTTTGCGGAGTTTTCATAC+AGG - chr1.1:72206666-72206685 MS.gene006277:intron 40.0%
! TTTAGGGTCTCTTTGAACTG+TGG - chr1.1:72208402-72208421 MS.gene006277:CDS 40.0%
! TTTGAGGAGCTCAGAGTTTT+TGG - chr1.1:72205925-72205944 MS.gene006277:CDS 40.0%
! TTTTCACCATGAACCTCTGA+TGG + chr1.1:72206984-72207003 None:intergenic 40.0%
!! GAATGTATTGGCTCAGGTTT+GGG - chr1.1:72205330-72205349 MS.gene006277:CDS 40.0%
!! GAGTTTTGATGGTAGTTGCA+TGG - chr1.1:72206410-72206429 MS.gene006277:CDS 40.0%
!! GCTGTTTTGCAATCTGTTTG+CGG - chr1.1:72206652-72206671 MS.gene006277:intron 40.0%
!! GTTTTGATGGTAGTTGCATG+GGG - chr1.1:72206412-72206431 MS.gene006277:CDS 40.0%
!! TGAACTGAATGTATTGGCTC+AGG - chr1.1:72205324-72205343 MS.gene006277:CDS 40.0%
!! TGAATGTATTGGCTCAGGTT+TGG - chr1.1:72205329-72205348 MS.gene006277:CDS 40.0%
!!! TAGAGTTTTTTCTGCCTCCT+GGG - chr1.1:72206706-72206725 MS.gene006277:intron 40.0%
!!! TTAGAGTTTTTTCTGCCTCC+TGG - chr1.1:72206705-72206724 MS.gene006277:intron 40.0%
AAAATGGCCTCAGCTACTGA+AGG + chr1.1:72208213-72208232 None:intergenic 45.0%
AAAGATGCTGCAAAGAGCCT+TGG - chr1.1:72207137-72207156 MS.gene006277:intron 45.0%
AAATGGCCTCAGCTACTGAA+GGG + chr1.1:72208212-72208231 None:intergenic 45.0%
AATGTTGAGCATGATCTCGG+CGG + chr1.1:72205582-72205601 None:intergenic 45.0%
ACTTCTCATGGTTCATGCCA+CGG - chr1.1:72207958-72207977 MS.gene006277:intron 45.0%
AGAACATTGGGAGACCATTC+TGG + chr1.1:72205535-72205554 None:intergenic 45.0%
AGCACAAACCCTACTTCTCA+TGG - chr1.1:72207946-72207965 MS.gene006277:intron 45.0%
AGCCCAAGAAAGCAATTACC+AGG + chr1.1:72204935-72204954 None:intergenic 45.0%
AGTGTGCATGTCTACAACTG+AGG - chr1.1:72206437-72206456 MS.gene006277:CDS 45.0%
ATTGTTCTATCGCTTACCCC+TGG - chr1.1:72206194-72206213 MS.gene006277:CDS 45.0%
CAAAACACTCCTATGCCTAC+AGG + chr1.1:72206358-72206377 None:intergenic 45.0%
CACCTGTGAGGAATGGTAAT+CGG - chr1.1:72205353-72205372 MS.gene006277:CDS 45.0%
CAGAGTCTTAACATTGCTGC+TGG - chr1.1:72206795-72206814 MS.gene006277:intron 45.0%
CCAATACATGACTGCAACGA+AGG + chr1.1:72205643-72205662 None:intergenic 45.0%
CCTCAAATTTACTGCCTGCA+AGG + chr1.1:72205912-72205931 None:intergenic 45.0%
CCTTCGTTGCAGTCATGTAT+TGG - chr1.1:72205640-72205659 MS.gene006277:intron 45.0%
CCTTGCAGGCAGTAAATTTG+AGG - chr1.1:72205909-72205928 MS.gene006277:CDS 45.0%
CGCTTCGTTACTTCAAAGAG+TGG - chr1.1:72205299-72205318 MS.gene006277:CDS 45.0%
CTACAATGAAGCGTATCTGC+AGG - chr1.1:72207509-72207528 MS.gene006277:CDS 45.0%
CTATCACATTGTCGGGCATA+CGG + chr1.1:72208116-72208135 None:intergenic 45.0%
CTCTTTGAACTGTGGCATTG+TGG - chr1.1:72208410-72208429 MS.gene006277:CDS 45.0%
CTGCAAGACAGATTACCCTT+TGG - chr1.1:72206599-72206618 MS.gene006277:CDS 45.0%
CTGGACTTATTCGGAGTAGA+AGG + chr1.1:72207697-72207716 None:intergenic 45.0%
CTTTCCAGGTTCATCACATC+TGG - chr1.1:72208266-72208285 MS.gene006277:intron 45.0%
GCTCAACATTACAACGTTCG+TGG - chr1.1:72205592-72205611 MS.gene006277:intron 45.0%
GCTGAAGTTTCATGGCTTCA+TGG - chr1.1:72204900-72204919 MS.gene006277:CDS 45.0%
GCTTGTGGTAACAACTTTCC+AGG - chr1.1:72208252-72208271 MS.gene006277:intron 45.0%
GGCATGAACCATGAGAAGTA+GGG + chr1.1:72207957-72207976 None:intergenic 45.0%
GGCGTGACTATTCAGGAAAT+TGG - chr1.1:72207877-72207896 MS.gene006277:intron 45.0%
GTTGATCCGATGTCTACCTT+AGG - chr1.1:72207017-72207036 MS.gene006277:intron 45.0%
TATGTTTCGAGATCATCCGG+AGG - chr1.1:72208555-72208574 MS.gene006277:CDS 45.0%
TGGCATGAACCATGAGAAGT+AGG + chr1.1:72207958-72207977 None:intergenic 45.0%
TTACAACGTTCGTGGAACCT+TGG - chr1.1:72205600-72205619 MS.gene006277:intron 45.0%
TTATTCGGAGTAGAAGGCTC+AGG + chr1.1:72207691-72207710 None:intergenic 45.0%
TTCAATAACTGAGAAGCCGG+TGG - chr1.1:72205183-72205202 MS.gene006277:CDS 45.0%
TTCTGCTGAAAAACTCGACC+AGG + chr1.1:72205508-72205527 None:intergenic 45.0%
TTGTTGTCGTCTTTCTCCAC+CGG + chr1.1:72205202-72205221 None:intergenic 45.0%
TTTCCACGTTTCCTCTCTGA+GGG + chr1.1:72207062-72207081 None:intergenic 45.0%
TTTGGACCATCCATTCACTC+AGG - chr1.1:72205943-72205962 MS.gene006277:CDS 45.0%
! CATTGCTGGCTGGACTTATT+CGG + chr1.1:72207706-72207725 None:intergenic 45.0%
! CTCCATATTTGGTGAGGCAT+CGG + chr1.1:72206934-72206953 None:intergenic 45.0%
! GGTGTTGAACTCGAGGAAAA+TGG - chr1.1:72206816-72206835 MS.gene006277:intron 45.0%
! TACCGATTACCATTCCTCAC+AGG + chr1.1:72205358-72205377 None:intergenic 45.0%
! TCCATATTTGGTGAGGCATC+GGG + chr1.1:72206933-72206952 None:intergenic 45.0%
! TCTTTCATCTGAGGCTCTGA+CGG + chr1.1:72207745-72207764 None:intergenic 45.0%
! TGGTAAAGGCGTGACTATTC+AGG - chr1.1:72207870-72207889 MS.gene006277:intron 45.0%
! TTCAGTAGCTGAGGCCATTT+TGG - chr1.1:72208212-72208231 MS.gene006277:intron 45.0%
! TTTTCCACGTTTCCTCTCTG+AGG + chr1.1:72207063-72207082 None:intergenic 45.0%
!! ACAACATGGTCAAGGTGTTG+CGG - chr1.1:72206524-72206543 MS.gene006277:CDS 45.0%
!!! CATAGGAGTGTTTTGGCTCA+TGG - chr1.1:72206363-72206382 MS.gene006277:CDS 45.0%
!!! CTGTAGGCATAGGAGTGTTT+TGG - chr1.1:72206356-72206375 MS.gene006277:CDS 45.0%
!!! TCTGCTTTTGGTTTCCTTGC+AGG - chr1.1:72205895-72205914 MS.gene006277:CDS 45.0%
AAACCCTCAGAGAGGAAACG+TGG - chr1.1:72207056-72207075 MS.gene006277:intron 50.0%
AAATATGGAGGAGGAGGAGG+AGG - chr1.1:72206944-72206963 MS.gene006277:CDS 50.0%
AAGCTCCTGTGAGAGTTCAG+GGG - chr1.1:72208626-72208645 MS.gene006277:CDS 50.0%
AATATGGAGGAGGAGGAGGA+GGG - chr1.1:72206945-72206964 MS.gene006277:CDS 50.0%
ACCAAATATGGAGGAGGAGG+AGG - chr1.1:72206941-72206960 MS.gene006277:CDS 50.0%
ACCCGATGCCTCACCAAATA+TGG - chr1.1:72206929-72206948 MS.gene006277:intron 50.0%
AGAGTATGAACGTACCGCCA+AGG + chr1.1:72207157-72207176 None:intergenic 50.0%
AGCACCACATGACATTGGAC+TGG + chr1.1:72205088-72205107 None:intergenic 50.0%
AGCATGTGATGCAGACCTTC+AGG - chr1.1:72208524-72208543 MS.gene006277:CDS 50.0%
AGTACCACAGGATCCATCAG+AGG - chr1.1:72206968-72206987 MS.gene006277:intron 50.0%
ATGTTGAGCATGATCTCGGC+GGG + chr1.1:72205581-72205600 None:intergenic 50.0%
CAGGATCCATCAGAGGTTCA+TGG - chr1.1:72206975-72206994 MS.gene006277:intron 50.0%
CCGGAGGAAGCAACATAATC+CGG - chr1.1:72208571-72208590 MS.gene006277:CDS 50.0%
CCTACAGGGAACCCATGTTT+GGG + chr1.1:72206343-72206362 None:intergenic 50.0%
CGATGCCTCACCAAATATGG+AGG - chr1.1:72206932-72206951 MS.gene006277:intron 50.0%
CGGAGGAAGCAACATAATCC+GGG - chr1.1:72208572-72208591 MS.gene006277:CDS 50.0%
CTCACCAAATATGGAGGAGG+AGG - chr1.1:72206938-72206957 MS.gene006277:CDS 50.0%
GAACTTCAAGAGCCGTTTGG+AGG - chr1.1:72208138-72208157 MS.gene006277:intron 50.0%
GAAGCTCCTGTGAGAGTTCA+GGG - chr1.1:72208625-72208644 MS.gene006277:CDS 50.0%
GACATGTGATCCAAAGGCCA+TGG + chr1.1:72204353-72204372 None:intergenic 50.0%
GCAGAACTTCAAGAGCCGTT+TGG - chr1.1:72208135-72208154 MS.gene006277:intron 50.0%
GGAGAGAACGATGGAACTCT+AGG - chr1.1:72205478-72205497 MS.gene006277:intron 50.0%
GGATTGCTAATAGAGGACGC+TGG - chr1.1:72208159-72208178 MS.gene006277:intron 50.0%
GTGCATGTCTACAACTGAGG+CGG - chr1.1:72206440-72206459 MS.gene006277:CDS 50.0%
TCCTCCTCCTCCTCCATATT+TGG + chr1.1:72206945-72206964 None:intergenic 50.0%
TCTGTGGATGGAGAGAACGA+TGG - chr1.1:72205469-72205488 MS.gene006277:intron 50.0%
TGCCTCACCAAATATGGAGG+AGG - chr1.1:72206935-72206954 MS.gene006277:intron 50.0%
TTTCAATTGGGGGACTACCG+TGG + chr1.1:72207978-72207997 None:intergenic 50.0%
TTTGTGCCCTTCAGTAGCTG+AGG - chr1.1:72208203-72208222 MS.gene006277:intron 50.0%
! CCGGATTATGTTGCTTCCTC+CGG + chr1.1:72208574-72208593 None:intergenic 50.0%
! CTCCTCCTCCATATTTGGTG+AGG + chr1.1:72206940-72206959 None:intergenic 50.0%
! TCTATTGGTGGCAAAAGGGG+TGG + chr1.1:72205235-72205254 None:intergenic 50.0%
! TGAACCTCTGATGGATCCTG+TGG + chr1.1:72206975-72206994 None:intergenic 50.0%
!! AACATGGTCAAGGTGTTGCG+GGG - chr1.1:72206526-72206545 MS.gene006277:CDS 50.0%
!! AGTAGCTGAGGCCATTTTGG+AGG - chr1.1:72208215-72208234 MS.gene006277:intron 50.0%
!! CAACATGGTCAAGGTGTTGC+GGG - chr1.1:72206525-72206544 MS.gene006277:CDS 50.0%
!! GATGGAACTCTAGGACTTCC+TGG - chr1.1:72205487-72205506 MS.gene006277:intron 50.0%
!! TGAGGCCATTTTGGAGGATC+TGG - chr1.1:72208221-72208240 MS.gene006277:intron 50.0%
!!! AGGAGTGTTTTGGCTCATGG+TGG - chr1.1:72206366-72206385 MS.gene006277:CDS 50.0%
!!! AGTGTTTTGGCTCATGGTGG+CGG - chr1.1:72206369-72206388 MS.gene006277:CDS 50.0%
AAGCGTATCTGCAGGCAGCA+TGG - chr1.1:72207517-72207536 MS.gene006277:CDS 55.0%
AGCGTATCTGCAGGCAGCAT+GGG - chr1.1:72207518-72207537 MS.gene006277:CDS 55.0%
CATGGGTTCCCTGTAGGCAT+AGG - chr1.1:72206346-72206365 MS.gene006277:CDS 55.0%
CCCAAACATGGGTTCCCTGT+AGG - chr1.1:72206340-72206359 MS.gene006277:CDS 55.0%
GATGCTGCAAAGAGCCTTGG+CGG - chr1.1:72207140-72207159 MS.gene006277:intron 55.0%
GCCTACAGGGAACCCATGTT+TGG + chr1.1:72206344-72206363 None:intergenic 55.0%
GCTTCATGGCTAGAGTTGCC+TGG - chr1.1:72204914-72204933 MS.gene006277:CDS 55.0%
GGAAGCTCCTGTGAGAGTTC+AGG - chr1.1:72208624-72208643 MS.gene006277:CDS 55.0%
GGAGCCAGATGTGATGAACC+TGG + chr1.1:72208273-72208292 None:intergenic 55.0%
GGCAGCATGGGATATCTCGT+TGG - chr1.1:72207530-72207549 MS.gene006277:CDS 55.0%
GTTTGGGCACCTGTGAGGAA+TGG - chr1.1:72205346-72205365 MS.gene006277:CDS 55.0%
TCACTCCCCTGAACTCTCAC+AGG + chr1.1:72208634-72208653 None:intergenic 55.0%
TCGGGCATACGGTGAGAAGT+TGG + chr1.1:72208105-72208124 None:intergenic 55.0%
TGTTGAGCATGATCTCGGCG+GGG + chr1.1:72205580-72205599 None:intergenic 55.0%
! GCTTAACGAGCATTGCTGGC+TGG + chr1.1:72207716-72207735 None:intergenic 55.0%
! GGAACCCATGTTTGGGCTAG+AGG + chr1.1:72206336-72206355 None:intergenic 55.0%
! TGCTGCTGGTGTTGAACTCG+AGG - chr1.1:72206809-72206828 MS.gene006277:intron 55.0%
!! GAATCTGTCCAAGGCGCTGA+AGG - chr1.1:72207610-72207629 MS.gene006277:CDS 55.0%
!! TTTGGTGAGGCATCGGGTCT+AGG + chr1.1:72206927-72206946 None:intergenic 55.0%
CAAACGCTCCTTCAGCGCCT+TGG + chr1.1:72207621-72207640 None:intergenic 60.0%
CTCAGGTTTGGGCACCTGTG+AGG - chr1.1:72205341-72205360 MS.gene006277:CDS 60.0%
GTTGAGGGGATCGCCAGAGT+CGG - chr1.1:72208050-72208069 MS.gene006277:intron 60.0%
TTGAGGGGATCGCCAGAGTC+GGG - chr1.1:72208051-72208070 MS.gene006277:intron 60.0%
!! ATGGTCAAGGTGTTGCGGGG+AGG - chr1.1:72206529-72206548 MS.gene006277:CDS 60.0%
!! TGGTCAAGGTGTTGCGGGGA+GGG - chr1.1:72206530-72206549 MS.gene006277:CDS 60.0%
GTCGGCTGCATTCCCGACTC+TGG + chr1.1:72208066-72208085 None:intergenic 65.0%
!! GGAGGAGGAGGGAGTACCAC+AGG - chr1.1:72206956-72206975 MS.gene006277:CDS 65.0%
!! GGTGAGGCATCGGGTCTAGG+TGG + chr1.1:72206924-72206943 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr1.1 gene 72204248 72208653 72204248 ID=MS.gene006277
chr1.1 mRNA 72204248 72208653 72204248 ID=MS.gene006277.t1;Parent=MS.gene006277
chr1.1 exon 72208389 72208653 72208389 ID=MS.gene006277.t1.exon1;Parent=MS.gene006277.t1
chr1.1 CDS 72208389 72208653 72208389 ID=cds.MS.gene006277.t1;Parent=MS.gene006277.t1
chr1.1 exon 72207163 72207728 72207163 ID=MS.gene006277.t1.exon2;Parent=MS.gene006277.t1
chr1.1 CDS 72207163 72207728 72207163 ID=cds.MS.gene006277.t1;Parent=MS.gene006277.t1
chr1.1 exon 72206937 72206984 72206937 ID=MS.gene006277.t1.exon3;Parent=MS.gene006277.t1
chr1.1 CDS 72206937 72206984 72206937 ID=cds.MS.gene006277.t1;Parent=MS.gene006277.t1
chr1.1 exon 72205740 72206646 72205740 ID=MS.gene006277.t1.exon4;Parent=MS.gene006277.t1
chr1.1 CDS 72205740 72206646 72205740 ID=cds.MS.gene006277.t1;Parent=MS.gene006277.t1
chr1.1 exon 72204248 72205401 72204248 ID=MS.gene006277.t1.exon5;Parent=MS.gene006277.t1
chr1.1 CDS 72204248 72205401 72204248 ID=cds.MS.gene006277.t1;Parent=MS.gene006277.t1
Gene Sequence

>MS.gene006277

ATGTCAGAACCTGAGGAAGAAAATCAAGACTTTCCTCCCAAGACAAAAACATCATTAGAAGAACATGGTTGTTCTATGGATTTTGATCTAGATTTAGAAACACCATGGCCTTTGGATCACATGTCCTTTATCACCAATCCCATGTCACCTTTTTTGTTTTCAAACATCTCTGATCAACCTTCTTCTCCTCTATGGACTTTTACTGATGGAGAAGATGGCAAACTTGCAGCTTCAGCTTTCTCTGATTGCCACAAGATCTTCTCTTGTATGTTTTGTTTTGTTTGATTCTTTTTCTGTTGACTTCAGTTTTGAAAGTTTTTTGAATCTTTTGAACTTGCTTAATTATTTCATAGTTGACTGTAACTTGATTTTGATGCAACAATTTTTGCTTTGTTTGATTTTATAATGTAATATGTGAATTTTAGAGTTTATAGTTATTTTCCCTTAATGTATAATGAGTTTATATGTGCCTAATTTTACTTGTGAATGTTGGTGTAGTGAAGAAACATTTTTTAATTAAAAAGAAAAATTATATTAATAACCTACTACAGTATTTGAAGATTAAGTTGATTATATGCGTTGTTAATTATGTAGAAGGACTTTATGTGATTGAAATTGAATTTGTTTTTGTCTCCCTCTTCTAAATTGAACAGCTGAAGTTTCATGGCTTCATGGCTAGAGTTGCCTGGTAATTGCTTTCTTGGGCTTTTACCTTATACAAGTACATGCTACATTTGTTATTATGATTTTTGAGTATTTATAAGGTTTGAAATTGAAAGTTCTAGATATACTTGTATTTTTGAGCTATTAATATAATAACCGTGAAGTTTTCATAATCCAGTCCAATGTCATGTGGTGCTAAACATGTATTTTGCAGTTTATGTGGAGAGCTGCATTTCTTCTAACTAAAGCTACTGTTTTTCAGGTGATTCAAATTCAATAACTGAGAAGCCGGTGGAGAAAGACGACAACAAAACACTTTTGCCACCCCTTTTGCCACCAATAGAAAATTTGGATGGATATTGTGTAATCAAGGAAAAGATGACACAAGCGCTTCGTTACTTCAAAGAGTGGACTGAACTGAATGTATTGGCTCAGGTTTGGGCACCTGTGAGGAATGGTAATCGGTATGTACTTACAACTTCAGGTCAACCCTTTGTCCTTGATCCACATAGTAATGGACTCAATCAGTATAGAACGGTTTCCCTGATGTACATGTTTTCTGTGGATGGAGAGAACGATGGAACTCTAGGACTTCCTGGTCGAGTTTTTCAGCAGAAACTACCAGAATGGTCTCCCAATGTTCTGTACTATTCTAATAAAGAGTATCCCCGCCGAGATCATGCTCAACATTACAACGTTCGTGGAACCTTGGCTTTGCCTGTATTTGAACCTTCGTTGCAGTCATGTATTGGTGTGATAGAGTTGATAATGACTTCACTAAAGATTAACTATGCTCCTGAGGTTGAAAAAATCTGCAAAGCCCTAGAGGTTGAGTTTCTTTTAACTTTGCAATCTATCCTAAGTTTTATGGTTTTCTTATGTTTGGTGATTACAATGTGACGAACTGATATTTATACATTTTATACCAAGTTTTCAATGGCAGAGATTTTGAATAACTATAAACATATTTAGATTCCTCAATGATCTGCTTTTGGTTTCCTTGCAGGCAGTAAATTTGAGGAGCTCAGAGTTTTTGGACCATCCATTCACTCAGGTATTTTTATTTTTAGAGTTTAATGGAGGTACGCAGTCAGTATAAATTTGTTTTGCACTGACAGCCAGTGACAATGATTCACACTTGCAACATAAGCCTATTTGTAACTGCATTTTAAAAATAATTGGAAAATACTGGATTCTCATTGGATGTTGGTGTAAATGCATATCCTGATTTGTTTTTATCATGTATGATGCATCCCAGTCTGTTATATCTAGATAATGTTGTTATTGTTCTATCGCTTACCCCTGGATTCCCACAGATATAACTTGGCAATGCTTTTAAATCAGATTTGCAATGAAGGGCGTCAAAATGCATTATCGGAGATCTTAGAGATATTGACAGTGGTGTGTGAAACTCATAATTTACCTCTAGCCCAAACATGGGTTCCCTGTAGGCATAGGAGTGTTTTGGCTCATGGTGGCGGTTTCAAGAAAAGTTGTTCGAGTTTTGATGGTAGTTGCATGGGGCAAGTGTGCATGTCTACAACTGAGGCGGCAGCCTATATCGTAGATGCTCATTTATGGGGTTTCAGAGAAGCATGTGTCGAACATCACTTACAACATGGTCAAGGTGTTGCGGGGAGGGCGTTTTTGTCTCAAAACATGTGCTTCTGCACAAACATTACCAAGTTCTGCAAGACAGATTACCCTTTGGTTCATTATGCTCTCATGTTTGGGTTAACAAGCTGTTTTGCAATCTGTTTGCGGAGTTTTCATACAGGAAATGATGATTATGTATTAGAGTTTTTTCTGCCTCCTGGGATTACTGAATTTCATGAACAGAAGATGCTGTTGGGATCCATATTGTCAACAATGAAACAGCATTTTCAGAGTCTTAACATTGCTGCTGGTGTTGAACTCGAGGAAAATGGTTCAATTGAAATTATTGAAGCAACTGATGAAGGCATTCGTCTTAGAACCGAATCTATTCCTATTGCTCAATCTATTAAATCACCACCTAGACCCGATGCCTCACCAAATATGGAGGAGGAGGAGGAGGGAGTACCACAGGATCCATCAGAGGTTCATGGTGAAAATGTAGGCAGAAGTGTTGATCCGATGTCTACCTTAGGGAATAAAAACATAAAGAAACCCTCAGAGAGGAAACGTGGAAAAACTGAGAAATCAATTAGTCTTGAAGTTCTACAACGTTATTTTGCTGGGAGTCTTAAAGATGCTGCAAAGAGCCTTGGCGGTACGTTCATACTCTGACATATAGTGTGATGTGATTTTATCTTTATTAATCTGCTGCTAGCTGGAAACATATTCATCCAATATTAACATTTTATAATTCTCTAAGAATACACATGCATACTCTACTACAATGGAGTGCATCTTTTGGTTATTTTATCTTTACAAATTTGCTGCTATCTGGAAATATACAATTACCGAAGAATGTATTACGTAATCGAAACATACAAACTGTATTTTTGTAAAAAAAAAAAAAAAAACAGTAGTAGTTTGTTATCTAAGAAACATGAAAGAAAGTAGTAGCTTTAACACAAACTTCTTGGATATATTCTTGTTGTACAGTTTGCCCTACTACAATGAAGCGTATCTGCAGGCAGCATGGGATATCTCGTTGGCCATCTCGAAAGATTAACAAGGTTAACCGTTCCCTATCTAAGCTCAAACGTGTTATTGAATCTGTCCAAGGCGCTGAAGGAGCGTTTGATTTGAATTCTCTTGGTAATAATCAACTTCCAATTGTTAGTTCATTTCCTGAGCCTTCTACTCCGAATAAGTCCAGCCAGCAATGCTCGTTAAGCAATAGGCCGTCAGAGCCTCAGATGAAAGAGAATGAATTTGATGCCTCTAAAGTATCAGAAACAAACATACAGATTGTAATGGAAAATCAATTGCTAGGAGGAAGGAAACATAGTCTTGAGAAAGAAGTGATTAATGGTAAAGGCGTGACTATTCAGGAAATTGGAAAGGACCGAAAAAGGAATAGAACTAGGAGTGGCTCGAGCGAAGATAGCACAAACCCTACTTCTCATGGTTCATGCCACGGTAGTCCCCCAATTGAAATTCCAACCATAAAAGATCCGTTCATTCCATCCAACAATGAACAACATGTTGTGTTGAGGGGATCGCCAGAGTCGGGAATGCAGCCGACTAATGCTTTAAACTCTCCAACTTCTCACCGTATGCCCGACAATGTGATAGCAGAACTTCAAGAGCCGTTTGGAGGATTGCTAATAGAGGACGCTGGAAGTTCGAAAGATTTGAGAAATTTGTGCCCTTCAGTAGCTGAGGCCATTTTGGAGGATCTGGCTCCAGAAGCTTGTGGTAACAACTTTCCAGGTTCATCACATCTGGCTCCTCCTAAACAATGCATTGATATCATTAATAATTCAGTGACGCCTTTTGCAGCTAGAAAAGAAATGAAGACTGTAACTATTAAGGCAACATATAGAGAAGATATCATAAGGTTTAGGGTCTCTTTGAACTGTGGCATTGTGGAATTGAAAGAAGAAGTTTCCAGAAGATTGAAACTTGAGGTTGGCACATTTGATATCAAGTACATGGACGATGATAATGAATGGGTTTTGATAGCATGTGATGCAGACCTTCAGGAGTGCATGTATGTTTCGAGATCATCCGGAGGAAGCAACATAATCCGGGTTTTGGTGCATGACATAACATCAAATCTTGGAAGCTCCTGTGAGAGTTCAGGGGAGTGA
Protein sequence

>MS.gene006277.t1

MSEPEEENQDFPPKTKTSLEEHGCSMDFDLDLETPWPLDHMSFITNPMSPFLFSNISDQPSSPLWTFTDGEDGKLAASAFSDCHKIFSCDSNSITEKPVEKDDNKTLLPPLLPPIENLDGYCVIKEKMTQALRYFKEWTELNVLAQVWAPVRNGNRYVLTTSGQPFVLDPHSNGLNQYRTVSLMYMFSVDGENDGTLGLPGRVFQQKLPEWSPNVLYYSNKEYPRRDHAQHYNVRGTLALPVFEPSLQSCIGVIELIMTSLKINYAPEVEKICKALEAVNLRSSEFLDHPFTQICNEGRQNALSEILEILTVVCETHNLPLAQTWVPCRHRSVLAHGGGFKKSCSSFDGSCMGQVCMSTTEAAAYIVDAHLWGFREACVEHHLQHGQGVAGRAFLSQNMCFCTNITKFCKTDYPLVHYALMFGLTSCFAICLRSFHTGNDDYVLEFFLPPGITEFHEQKMLLGSILSTMKQHFQSLNIAAGVELEENGSIEIIEATDEGIRLRTESIPIAQSIKSPPRPDASPNMEEEEEGVPQDPSEVHGENVGRSVDPMSTLGNKNIKKPSERKRGKTEKSISLEVLQRYFAGSLKDAAKSLGVCPTTMKRICRQHGISRWPSRKINKVNRSLSKLKRVIESVQGAEGAFDLNSLGNNQLPIVSSFPEPSTPNKSSQQCSLSNRPSEPQMKENEFDASKVSETNIQIVMENQLLGGRKHSLEKEVINGKGVTIQEIGKDRKRNRTRSGSSEDSTNPTSHGSCHGSPPIEIPTIKDPFIPSNNEQHVVLRGSPESGMQPTNALNSPTSHRMPDNVIAELQEPFGGLLIEDAGSSKDLRNLCPSVAEAILEDLAPEACGNNFPGSSHLAPPKQCIDIINNSVTPFAARKEMKTVTIKATYREDIIRFRVSLNCGIVELKEEVSRRLKLEVGTFDIKYMDDDNEWVLIACDADLQECMYVSRSSGGSNIIRVLVHDITSNLGSSCESSGE