Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006407.t1 | AKN91693.1 | 100 | 330 | 0 | 0 | 1 | 330 | 1 | 330 | 1.10E-172 | 615.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006407.t1 | Q7XA73 | 38.9 | 339 | 152 | 6 | 10 | 327 | 9 | 313 | 1.1e-48 | 195.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006407.t1 | A0A186XM88 | 100.0 | 330 | 0 | 0 | 1 | 330 | 1 | 330 | 7.7e-173 | 615.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene006407.t1 | TF | Tify |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006407.t1 | MTR_1g102900 | 96.970 | 330 | 10 | 0 | 1 | 330 | 1 | 330 | 0.0 | 662 |
| MS.gene006407.t1 | MTR_1g102900 | 96.364 | 330 | 10 | 1 | 1 | 330 | 1 | 328 | 0.0 | 654 |
| MS.gene006407.t1 | MTR_1g102900 | 95.732 | 328 | 12 | 1 | 1 | 328 | 1 | 326 | 0.0 | 646 |
| MS.gene006407.t1 | MTR_1g102900 | 96.484 | 256 | 9 | 0 | 1 | 256 | 1 | 256 | 0.0 | 517 |
| MS.gene006407.t1 | MTR_1g102900 | 96.154 | 234 | 9 | 0 | 1 | 234 | 1 | 234 | 2.87e-170 | 473 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006407.t1 | AT4G14720 | 43.648 | 307 | 123 | 6 | 1 | 285 | 1 | 279 | 9.04e-69 | 218 |
| MS.gene006407.t1 | AT4G14720 | 43.648 | 307 | 123 | 6 | 1 | 285 | 1 | 279 | 1.89e-68 | 217 |
| MS.gene006407.t1 | AT4G14713 | 43.098 | 297 | 121 | 5 | 10 | 285 | 9 | 278 | 1.02e-66 | 212 |
| MS.gene006407.t1 | AT4G14713 | 43.657 | 268 | 103 | 5 | 10 | 256 | 9 | 249 | 1.34e-58 | 189 |
| MS.gene006407.t1 | AT4G14713 | 39.919 | 248 | 101 | 5 | 10 | 236 | 9 | 229 | 5.78e-45 | 154 |
| MS.gene006407.t1 | AT4G14713 | 45.050 | 202 | 77 | 5 | 10 | 190 | 9 | 197 | 4.51e-42 | 145 |
| MS.gene006407.t1 | AT4G14713 | 45.050 | 202 | 77 | 5 | 10 | 190 | 9 | 197 | 4.51e-42 | 145 |
Find 103 sgRNAs with CRISPR-Local
Find 371 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCATTGATTTGAATGATAA+AGG | 0.266889 | 1.3:-70697875 | MS.gene006407:intron |
| CAGGGATGCGCAGGCCTTCC+TGG | 0.302807 | 1.3:-70702395 | MS.gene006407:CDS |
| TGGAATACCCTCTGCATTAC+AGG | 0.304356 | 1.3:-70699313 | MS.gene006407:CDS |
| TCAACCTCCGCCGAAGGCTT+TGG | 0.326869 | 1.3:-70702241 | MS.gene006407:CDS |
| CGCAGATTCCTCAAAGATAA+AGG | 0.351475 | 1.3:-70702693 | MS.gene006407:intron |
| GAGGTTGAGGAGGGTGGTGG+TGG | 0.353896 | 1.3:+70702256 | None:intergenic |
| ACCTTTATCATTCAAATCAA+TGG | 0.357456 | 1.3:+70697874 | None:intergenic |
| AAGAGGACTTCTTTATCAAT+AGG | 0.361087 | 1.3:+70700590 | None:intergenic |
| TGCACACCTAGTGGGTCATT+TGG | 0.371549 | 1.3:-70700866 | MS.gene006407:CDS |
| GAGGAGGGTGGTGGTGGTGA+TGG | 0.372920 | 1.3:+70702262 | None:intergenic |
| GATCGCCTGTGATTTGTTCC+AGG | 0.376842 | 1.3:+70702377 | None:intergenic |
| GTTAACAACGTTGGCATCAT+TGG | 0.378467 | 1.3:+70702152 | None:intergenic |
| TCCGTGGGTCTTTCAGAAAC+AGG | 0.382345 | 1.3:+70702177 | None:intergenic |
| GCACACCTAGTGGGTCATTT+GGG | 0.393611 | 1.3:-70700865 | MS.gene006407:CDS |
| GTGGTGGTGATGGCGGTGAA+TGG | 0.397278 | 1.3:+70702272 | None:intergenic |
| GTGAAGCTCCATGCCTCAAA+TGG | 0.403278 | 1.3:-70697992 | MS.gene006407:CDS |
| ACATCTTTACCCACCTTATC+CGG | 0.403564 | 1.3:+70700791 | None:intergenic |
| TACCTGTTTGAGCGACTTGA+AGG | 0.408154 | 1.3:+70700549 | None:intergenic |
| TCAATGGGAAGGGTAACTTT+TGG | 0.411767 | 1.3:+70697890 | None:intergenic |
| GCGGAGGTTGAGGAGGGTGG+TGG | 0.414332 | 1.3:+70702253 | None:intergenic |
| AAGGTCCAAAGCAGTATCTT+CGG | 0.420329 | 1.3:+70702215 | None:intergenic |
| TGATGGAGTTTCGCCGGATA+AGG | 0.423382 | 1.3:-70700804 | MS.gene006407:intron |
| TTTGAGGCATGGAGCTTCAC+TGG | 0.425496 | 1.3:+70697995 | None:intergenic |
| TATAAAAGATGTAGAGGGTC+AGG | 0.427753 | 1.3:-70698250 | MS.gene006407:intron |
| GGATCCCGAAGATACTGCTT+TGG | 0.428308 | 1.3:-70702220 | MS.gene006407:CDS |
| ACGACTTGAATTCCCATTTG+AGG | 0.447514 | 1.3:+70697979 | None:intergenic |
| ATCCTTCAAGTCGCTCAAAC+AGG | 0.448349 | 1.3:-70700551 | MS.gene006407:intron |
| AGTTGTTACCTTTATCTTTG+AGG | 0.457102 | 1.3:+70702685 | None:intergenic |
| AAAGCCTTCGGCGGAGGTTG+AGG | 0.462001 | 1.3:+70702243 | None:intergenic |
| GAGGGTGGTGGTGGTGATGG+CGG | 0.465413 | 1.3:+70702265 | None:intergenic |
| GCCAACGTTGTTAACCCTCC+CGG | 0.470865 | 1.3:-70702144 | MS.gene006407:CDS |
| CCTTTATCATTCAAATCAAT+GGG | 0.472367 | 1.3:+70697875 | None:intergenic |
| TGAAGGATTGTTGTGTCAGT+AGG | 0.473687 | 1.3:+70700566 | None:intergenic |
| TTTATTTGAAGGATTATCCT+GGG | 0.483950 | 1.3:+70700646 | None:intergenic |
| GGATCCAAAGCCTTCGGCGG+AGG | 0.495977 | 1.3:+70702237 | None:intergenic |
| GCCTTCGGCGGAGGTTGAGG+AGG | 0.498126 | 1.3:+70702246 | None:intergenic |
| GGAAGCACAACTCGTGATGC+TGG | 0.504564 | 1.3:-70699284 | MS.gene006407:intron |
| CTTTGAGAGAAATCACCTGC+TGG | 0.508162 | 1.3:+70702355 | None:intergenic |
| CTGGAAACTAGAGGCAGTCT+AGG | 0.512274 | 1.3:+70697932 | None:intergenic |
| AGGTCCAAAGCAGTATCTTC+GGG | 0.513512 | 1.3:+70702216 | None:intergenic |
| TATCATTCAAATCAATGGGA+AGG | 0.514085 | 1.3:+70697879 | None:intergenic |
| CCCTCCTCAACCTCCGCCGA+AGG | 0.515746 | 1.3:-70702247 | MS.gene006407:CDS |
| AAATGTCATCTTCAGTGAGT+TGG | 0.516724 | 1.3:+70702739 | None:intergenic |
| TTGAATTCCCATTTGAGGCA+TGG | 0.517522 | 1.3:+70697984 | None:intergenic |
| GTTGGCATCATTGGTTTCCG+TGG | 0.522851 | 1.3:+70702161 | None:intergenic |
| GTGATGGCGGTGAATGGCGG+AGG | 0.524011 | 1.3:+70702278 | None:intergenic |
| TCTTCAGTGAGTTGGTTAAG+AGG | 0.524819 | 1.3:+70702747 | None:intergenic |
| ACACCAACGCCGACGGTAGC+CGG | 0.528495 | 1.3:+70702303 | None:intergenic |
| TGAAGCTCCATGCCTCAAAT+GGG | 0.529697 | 1.3:-70697991 | MS.gene006407:CDS |
| TCGGCGGAGGTTGAGGAGGG+TGG | 0.532423 | 1.3:+70702250 | None:intergenic |
| AGGCATGGAGCTTCACTGGA+AGG | 0.532614 | 1.3:+70697999 | None:intergenic |
| CCTCTGCATTACAGGGAGAA+AGG | 0.534355 | 1.3:-70699305 | MS.gene006407:CDS |
| TCTTCGGGATCCAAAGCCTT+CGG | 0.534680 | 1.3:+70702231 | None:intergenic |
| GTGGTGATGGCGGTGAATGG+CGG | 0.537319 | 1.3:+70702275 | None:intergenic |
| CTTTCTCCCTGTAATGCAGA+GGG | 0.537471 | 1.3:+70699306 | None:intergenic |
| ATCATTCAAATCAATGGGAA+GGG | 0.540719 | 1.3:+70697880 | None:intergenic |
| GAAGGATTGTTGTGTCAGTA+GGG | 0.541726 | 1.3:+70700567 | None:intergenic |
| TTATCCTGGGGAAAGGAGGA+TGG | 0.548308 | 1.3:+70700659 | None:intergenic |
| ATGTCCATCCTCCTTTCCCC+AGG | 0.553018 | 1.3:-70700663 | MS.gene006407:CDS |
| GTTAAGAGGTCTGTCGAGGA+TGG | 0.553244 | 1.3:+70702761 | None:intergenic |
| TGAAGGATTATCCTGGGGAA+AGG | 0.554218 | 1.3:+70700652 | None:intergenic |
| CAAATCACAGGCGATCCAGC+AGG | 0.554699 | 1.3:-70702370 | MS.gene006407:CDS |
| GAGGTCTGTCGAGGATGGAT+CGG | 0.562371 | 1.3:+70702766 | None:intergenic |
| CCTTTCTCCCTGTAATGCAG+AGG | 0.565241 | 1.3:+70699305 | None:intergenic |
| GCCTGTGATTTGTTCCAGGA+AGG | 0.565338 | 1.3:+70702381 | None:intergenic |
| CCAACGTTGTTAACCCTCCC+GGG | 0.565503 | 1.3:-70702143 | MS.gene006407:intron |
| TGTCTATGATGGAGTTTCGC+CGG | 0.565522 | 1.3:-70700810 | MS.gene006407:CDS |
| TTGGCATCATTGGTTTCCGT+GGG | 0.565795 | 1.3:+70702162 | None:intergenic |
| ACACCGGCTACCGTCGGCGT+TGG | 0.567567 | 1.3:-70702306 | MS.gene006407:CDS |
| GCCTTCCTGGAACAAATCAC+AGG | 0.567775 | 1.3:-70702382 | MS.gene006407:CDS |
| TTGTTGTGTCAGTAGGGAAG+AGG | 0.573992 | 1.3:+70700573 | None:intergenic |
| CCTTCGGCGGAGGTTGAGGA+GGG | 0.574219 | 1.3:+70702247 | None:intergenic |
| ACCTGTTTCTGAAAGACCCA+CGG | 0.575091 | 1.3:-70702178 | MS.gene006407:CDS |
| GAGGATGGATCGGAAGGAAA+CGG | 0.575789 | 1.3:+70702776 | None:intergenic |
| TCGAAGGGCAAGAAACTGAC+TGG | 0.582148 | 1.3:-70698055 | MS.gene006407:CDS |
| GTGTTCGTACAGGGATGCGC+AGG | 0.586574 | 1.3:-70702404 | MS.gene006407:intron |
| GGTAAGGTGAATGTCTATGA+TGG | 0.592087 | 1.3:-70700821 | MS.gene006407:CDS |
| CACAGAGGGTGCACACCTAG+TGG | 0.593532 | 1.3:-70700875 | MS.gene006407:intron |
| AGGATTATCCTGGGGAAAGG+AGG | 0.594141 | 1.3:+70700655 | None:intergenic |
| AGAGGCAGTCTAGGCTGTGG+TGG | 0.596317 | 1.3:+70697941 | None:intergenic |
| GGAATACCCTCTGCATTACA+GGG | 0.598431 | 1.3:-70699312 | MS.gene006407:CDS |
| CAGGTGAAGTAGATTTCTGA+AGG | 0.607611 | 1.3:+70702196 | None:intergenic |
| TTATCAATAGGTAAGTTGCA+AGG | 0.614238 | 1.3:+70700602 | None:intergenic |
| TCTGTCGAGGATGGATCGGA+AGG | 0.617863 | 1.3:+70702770 | None:intergenic |
| ACCTACTGACGATGATACAC+CGG | 0.620314 | 1.3:-70702322 | MS.gene006407:CDS |
| ACTAGAGGCAGTCTAGGCTG+TGG | 0.622722 | 1.3:+70697938 | None:intergenic |
| CCGGAATCGGAAACGATGAA+CGG | 0.630536 | 1.3:-70702807 | None:intergenic |
| GCGATATCTTGAAAAGCGAA+AGG | 0.632146 | 1.3:-70698205 | MS.gene006407:CDS |
| GGAGGAGACACCAACGCCGA+CGG | 0.632850 | 1.3:+70702296 | None:intergenic |
| AATGGAGAACAGACCCGGGA+GGG | 0.635558 | 1.3:+70702130 | None:intergenic |
| CCCGGGAGGGTTAACAACGT+TGG | 0.637856 | 1.3:+70702143 | None:intergenic |
| AGACTGCCTCTAGTTTCCAG+TGG | 0.639013 | 1.3:-70697929 | MS.gene006407:CDS |
| GATGATACACCGGCTACCGT+CGG | 0.644121 | 1.3:-70702312 | MS.gene006407:CDS |
| ATCTTGAAAAGCGAAAGGAC+AGG | 0.644523 | 1.3:-70698200 | MS.gene006407:intron |
| ACAGAGGGTGCACACCTAGT+GGG | 0.649773 | 1.3:-70700874 | MS.gene006407:intron |
| TCGGGATCCAAAGCCTTCGG+CGG | 0.652180 | 1.3:+70702234 | None:intergenic |
| ATTTGCCCAAATGACCCACT+AGG | 0.656723 | 1.3:+70700860 | None:intergenic |
| TTATTTGAAGGATTATCCTG+GGG | 0.659271 | 1.3:+70700647 | None:intergenic |
| GCCGGTGTATCATCGTCAGT+AGG | 0.662569 | 1.3:+70702321 | None:intergenic |
| GCTGAGCCACTGGAAACTAG+AGG | 0.668085 | 1.3:+70697923 | None:intergenic |
| GTTGGTTAAGAGGTCTGTCG+AGG | 0.685077 | 1.3:+70702757 | None:intergenic |
| AAATGGAGAACAGACCCGGG+AGG | 0.721352 | 1.3:+70702129 | None:intergenic |
| GAATCGGAAACGATGAACGG+CGG | 0.745087 | 1.3:-70702804 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATAAAAAAAATGAAATGA+TGG | - | chr1.3:70697808-70697827 | MS.gene006407:intron | 10.0% |
| !!! | TATCTAAAGTAATAATTAAA+TGG | + | chr1.3:70698333-70698352 | None:intergenic | 10.0% |
| !!! | TTATTTATTTGTTTAGAATT+AGG | - | chr1.3:70697960-70697979 | MS.gene006407:CDS | 10.0% |
| !!! | TTTAATATCATCTATATTTT+GGG | - | chr1.3:70698196-70698215 | MS.gene006407:intron | 10.0% |
| !! | AAAAAAACATGAAAGAAAAA+TGG | + | chr1.3:70697660-70697679 | None:intergenic | 15.0% |
| !! | AACCTAAAAATAATCATTTA+GGG | + | chr1.3:70698400-70698419 | None:intergenic | 15.0% |
| !! | AATTTAATACATACATCAAA+AGG | + | chr1.3:70701303-70701322 | None:intergenic | 15.0% |
| !! | ATAATTAACAAAACTAACAT+TGG | + | chr1.3:70698834-70698853 | None:intergenic | 15.0% |
| !! | TAAAATTAACAAACAAATGA+AGG | - | chr1.3:70702326-70702345 | MS.gene006407:CDS | 15.0% |
| !! | TAACCTAAAAATAATCATTT+AGG | + | chr1.3:70698401-70698420 | None:intergenic | 15.0% |
| !!! | AAGATTTTTAACTTCATAAT+TGG | - | chr1.3:70700416-70700435 | MS.gene006407:intron | 15.0% |
| !!! | ATGATCATTTTGTATATTAA+AGG | - | chr1.3:70698424-70698443 | MS.gene006407:intron | 15.0% |
| !!! | CTTTAATATCATCTATATTT+TGG | - | chr1.3:70698195-70698214 | MS.gene006407:intron | 15.0% |
| !!! | GTATTGATATTTATTGTTTA+GGG | - | chr1.3:70702062-70702081 | MS.gene006407:intron | 15.0% |
| !!! | TCATATTTAATTGTTGTTTA+CGG | - | chr1.3:70698239-70698258 | MS.gene006407:CDS | 15.0% |
| !!! | TGTATTGATATTTATTGTTT+AGG | - | chr1.3:70702061-70702080 | MS.gene006407:intron | 15.0% |
| !!! | TGTATTGTCTTTTTATATAT+AGG | + | chr1.3:70702107-70702126 | None:intergenic | 15.0% |
| !!! | TTTTGATGTATGTATTAAAT+TGG | - | chr1.3:70701302-70701321 | MS.gene006407:intron | 15.0% |
| !!! | TTTTTACTCGTTTAAAATTA+TGG | - | chr1.3:70700376-70700395 | MS.gene006407:intron | 15.0% |
| !! | AATAAATATTACCGATACTT+AGG | + | chr1.3:70701494-70701513 | None:intergenic | 20.0% |
| !! | AGAGTAATAAAATAATTCAG+CGG | + | chr1.3:70701677-70701696 | None:intergenic | 20.0% |
| !! | AGATAGTATATGCTAAAAAA+GGG | + | chr1.3:70702165-70702184 | None:intergenic | 20.0% |
| !! | ATACAAGTATGGTTAATTAT+TGG | + | chr1.3:70699051-70699070 | None:intergenic | 20.0% |
| !! | ATTCCTTAAAACTTAAAAAG+TGG | + | chr1.3:70701652-70701671 | None:intergenic | 20.0% |
| !! | ATTGGAGTAGAAAAATTAAA+TGG | + | chr1.3:70697234-70697253 | None:intergenic | 20.0% |
| !! | TAATTCAAAAAATCGGTATT+CGG | + | chr1.3:70700072-70700091 | None:intergenic | 20.0% |
| !! | TACAAGTATGGTTAATTATT+GGG | + | chr1.3:70699050-70699069 | None:intergenic | 20.0% |
| !! | TATTCAATTAACCTAAAAAG+TGG | + | chr1.3:70702212-70702231 | None:intergenic | 20.0% |
| !! | TATTGTCTAATATTCATCTA+CGG | + | chr1.3:70702407-70702426 | None:intergenic | 20.0% |
| !! | TCTCAAAGTATATTAATTAG+AGG | - | chr1.3:70701999-70702018 | MS.gene006407:intron | 20.0% |
| !! | TTGAATTATGCAAAAATCAT+TGG | - | chr1.3:70700156-70700175 | MS.gene006407:intron | 20.0% |
| !!! | AAAATGAAATTTGATAATGC+AGG | + | chr1.3:70699808-70699827 | None:intergenic | 20.0% |
| !!! | AAATGAAATTTGATAATGCA+GGG | + | chr1.3:70699807-70699826 | None:intergenic | 20.0% |
| !!! | AACCCTAAATGATTATTTTT+AGG | - | chr1.3:70698395-70698414 | MS.gene006407:intron | 20.0% |
| !!! | AATTGGTTTTACAGATAAAA+TGG | - | chr1.3:70700433-70700452 | MS.gene006407:intron | 20.0% |
| !!! | CTTTTACTTGTTTAAAATCA+TGG | - | chr1.3:70700273-70700292 | MS.gene006407:intron | 20.0% |
| !!! | GAGCTTTTAATTCAAAAAAT+CGG | + | chr1.3:70700079-70700098 | None:intergenic | 20.0% |
| !!! | GTTTAATTATTTTGTTGTGT+TGG | - | chr1.3:70697687-70697706 | MS.gene006407:intron | 20.0% |
| !!! | TATTTGTTTAGAATTAGGTT+GGG | - | chr1.3:70697965-70697984 | MS.gene006407:CDS | 20.0% |
| !!! | TGATAGTGATTTATGTATTT+GGG | - | chr1.3:70701154-70701173 | MS.gene006407:intron | 20.0% |
| !!! | TGTTTTATAAAAGATGTAGA+GGG | - | chr1.3:70701514-70701533 | MS.gene006407:intron | 20.0% |
| !!! | TTACCACTTTTTAAGTTTTA+AGG | - | chr1.3:70701646-70701665 | MS.gene006407:intron | 20.0% |
| !!! | TTATTTGTTTAGAATTAGGT+TGG | - | chr1.3:70697964-70697983 | MS.gene006407:CDS | 20.0% |
| !!! | TTGATAGTGATTTATGTATT+TGG | - | chr1.3:70701153-70701172 | MS.gene006407:intron | 20.0% |
| !!! | TTGTTTTATAAAAGATGTAG+AGG | - | chr1.3:70701513-70701532 | MS.gene006407:intron | 20.0% |
| !!! | TTTGTTAATTTTACTTTCTC+TGG | + | chr1.3:70702319-70702338 | None:intergenic | 20.0% |
| !!! | TTTGTTATCTTTTGTTTCTT+GGG | - | chr1.3:70697731-70697750 | MS.gene006407:intron | 20.0% |
| ! | AAATAAAAATGCAGCAGTTT+GGG | - | chr1.3:70699139-70699158 | MS.gene006407:intron | 25.0% |
| ! | AAATTCCACATTAACAAAAC+TGG | + | chr1.3:70698544-70698563 | None:intergenic | 25.0% |
| ! | AACTTGTGATAAAAACAGAA+AGG | + | chr1.3:70699476-70699495 | None:intergenic | 25.0% |
| ! | AATATTTACAAGTTAGGAAC+TGG | - | chr1.3:70700297-70700316 | MS.gene006407:intron | 25.0% |
| ! | AATTATGAGAACCTAAGTAT+CGG | - | chr1.3:70701480-70701499 | MS.gene006407:intron | 25.0% |
| ! | ACATAAATCACTATCAATCT+CGG | + | chr1.3:70701150-70701169 | None:intergenic | 25.0% |
| ! | ACATGAATGATGGTTAAAAA+AGG | + | chr1.3:70700911-70700930 | None:intergenic | 25.0% |
| ! | ACCTTTATCATTCAAATCAA+TGG | + | chr1.3:70701898-70701917 | None:intergenic | 25.0% |
| ! | ATATTTACAAGTTAGGAACT+GGG | - | chr1.3:70700298-70700317 | MS.gene006407:intron | 25.0% |
| ! | ATGCTAAAAAAGGGTAAAAT+TGG | + | chr1.3:70702156-70702175 | None:intergenic | 25.0% |
| ! | CATTGAATAACTTATGTATC+TGG | + | chr1.3:70702262-70702281 | None:intergenic | 25.0% |
| ! | CCTTTATCATTCAAATCAAT+GGG | + | chr1.3:70701897-70701916 | None:intergenic | 25.0% |
| ! | CTAAAGTGTAAACCAATAAT+TGG | - | chr1.3:70702687-70702706 | MS.gene006407:intron | 25.0% |
| ! | CTATCAACAAATTATCTACT+TGG | + | chr1.3:70700594-70700613 | None:intergenic | 25.0% |
| ! | GAAATATGAAGAAATCTTGT+GGG | - | chr1.3:70701237-70701256 | MS.gene006407:intron | 25.0% |
| ! | GAGATAGTATATGCTAAAAA+AGG | + | chr1.3:70702166-70702185 | None:intergenic | 25.0% |
| ! | GAGTAATAAAATAATTCAGC+GGG | + | chr1.3:70701676-70701695 | None:intergenic | 25.0% |
| ! | GCATCAAGTAATAAATTGAA+TGG | + | chr1.3:70699434-70699453 | None:intergenic | 25.0% |
| ! | GGTGAAATTTAATTGATGTA+TGG | + | chr1.3:70699026-70699045 | None:intergenic | 25.0% |
| ! | GTTCGAATCAAATATTAGAT+CGG | + | chr1.3:70699968-70699987 | None:intergenic | 25.0% |
| ! | TGAAATATGAAGAAATCTTG+TGG | - | chr1.3:70701236-70701255 | MS.gene006407:intron | 25.0% |
| ! | TTATTGAAAATAGGTGTTCT+AGG | + | chr1.3:70699767-70699786 | None:intergenic | 25.0% |
| ! | TTGTTGACCATTTCTATAAA+TGG | - | chr1.3:70699846-70699865 | MS.gene006407:intron | 25.0% |
| ! | TTTAGATATCATGTTTGAAG+TGG | - | chr1.3:70698345-70698364 | MS.gene006407:intron | 25.0% |
| ! | TTTATTTGAAGGATTATCCT+GGG | + | chr1.3:70699126-70699145 | None:intergenic | 25.0% |
| ! | TTTGTGTAAAATATGACTGA+AGG | - | chr1.3:70698804-70698823 | MS.gene006407:intron | 25.0% |
| !! | ATATAGAAAGTATGAAGCAT+TGG | + | chr1.3:70697252-70697271 | None:intergenic | 25.0% |
| !! | GAGTTGATTATAGCATAATT+TGG | - | chr1.3:70697906-70697925 | MS.gene006407:CDS | 25.0% |
| !! | TCTTTTAGCCAAGTAATATA+CGG | + | chr1.3:70701192-70701211 | None:intergenic | 25.0% |
| !! | TTAGATATCATGTTTGAAGT+GGG | - | chr1.3:70698346-70698365 | MS.gene006407:intron | 25.0% |
| !! | TTTATTACTCTGCCTTTTTA+GGG | - | chr1.3:70701686-70701705 | MS.gene006407:intron | 25.0% |
| !! | TTTTATCTTGTGTTCTCTTT+TGG | - | chr1.3:70700551-70700570 | MS.gene006407:intron | 25.0% |
| !! | TTTTATTACTCTGCCTTTTT+AGG | - | chr1.3:70701685-70701704 | MS.gene006407:intron | 25.0% |
| !!! | AAGTGCAGTTTTTAGTTTAA+TGG | + | chr1.3:70698658-70698677 | None:intergenic | 25.0% |
| !!! | CAATGACTTGTTTAAAATCA+TGG | - | chr1.3:70700104-70700123 | MS.gene006407:intron | 25.0% |
| !!! | CTATTTTTCTACCTTAGTTT+TGG | - | chr1.3:70700850-70700869 | MS.gene006407:CDS | 25.0% |
| !!! | GTTTGTTATCTTTTGTTTCT+TGG | - | chr1.3:70697730-70697749 | MS.gene006407:intron | 25.0% |
| !!! | TCTAGATATTTGATAATGAC+AGG | + | chr1.3:70698166-70698185 | None:intergenic | 25.0% |
| !!! | TTTATAGCTTTATGTGAAGT+GGG | - | chr1.3:70698003-70698022 | MS.gene006407:CDS | 25.0% |
| !!! | TTTTATAGCTTTATGTGAAG+TGG | - | chr1.3:70698002-70698021 | MS.gene006407:CDS | 25.0% |
| !!! | TTTTATTTGAAGGATTATCC+TGG | + | chr1.3:70699127-70699146 | None:intergenic | 25.0% |
| !!! | TTTTTAGCATATACTATCTC+CGG | - | chr1.3:70702166-70702185 | MS.gene006407:CDS | 25.0% |
| !!! | TTTTTTCATGCATACTTTTC+TGG | - | chr1.3:70699313-70699332 | MS.gene006407:CDS | 25.0% |
| AAAACTATTGAACAGTGTAC+TGG | + | chr1.3:70702743-70702762 | None:intergenic | 30.0% | |
| AAATATCATCTGCTGTTAAC+TGG | + | chr1.3:70702654-70702673 | None:intergenic | 30.0% | |
| AAGAGGACTTCTTTATCAAT+AGG | + | chr1.3:70699182-70699201 | None:intergenic | 30.0% | |
| AAGTATGGTTAATTATTGGG+AGG | + | chr1.3:70699047-70699066 | None:intergenic | 30.0% | |
| AATTGTGCACAAATTGTCAA+CGG | + | chr1.3:70702355-70702374 | None:intergenic | 30.0% | |
| ACCAATGTTAAGAACTTGAA+TGG | + | chr1.3:70698857-70698876 | None:intergenic | 30.0% | |
| ACTAGATAAGATAGGAAACA+GGG | + | chr1.3:70700776-70700795 | None:intergenic | 30.0% | |
| ACTTAGGTTCTCATAATTTG+AGG | + | chr1.3:70701478-70701497 | None:intergenic | 30.0% | |
| AGCAGTAACTTTATAACACA+AGG | + | chr1.3:70700832-70700851 | None:intergenic | 30.0% | |
| AGTTGTTACCTTTATCTTTG+AGG | + | chr1.3:70697087-70697106 | None:intergenic | 30.0% | |
| ATCATTCAAATCAATGGGAA+GGG | + | chr1.3:70701892-70701911 | None:intergenic | 30.0% | |
| ATTAAATGGAAGTTGTTCTC+AGG | + | chr1.3:70697220-70697239 | None:intergenic | 30.0% | |
| ATTGACATATATTGCAACAG+AGG | + | chr1.3:70700985-70701004 | None:intergenic | 30.0% | |
| CAAATAAAAATGCAGCAGTT+TGG | - | chr1.3:70699138-70699157 | MS.gene006407:intron | 30.0% | |
| CATAAATCACTATCAATCTC+GGG | + | chr1.3:70701149-70701168 | None:intergenic | 30.0% | |
| CATGACTTCAACAATGAATA+TGG | - | chr1.3:70698508-70698527 | MS.gene006407:intron | 30.0% | |
| CATGGCAATATTTACAAGTT+AGG | - | chr1.3:70700291-70700310 | MS.gene006407:intron | 30.0% | |
| CTGGTAATAATCTAGCAATA+AGG | + | chr1.3:70702724-70702743 | None:intergenic | 30.0% | |
| GAATTTCTTTCAGTTCCAAT+CGG | - | chr1.3:70698558-70698577 | MS.gene006407:intron | 30.0% | |
| GAGTGGATGGAAAATATTTA+GGG | - | chr1.3:70698085-70698104 | MS.gene006407:intron | 30.0% | |
| GATGCCAAGAAAAAAAACAA+AGG | + | chr1.3:70700654-70700673 | None:intergenic | 30.0% | |
| GGTATCCAAGCTAAAAAAAA+AGG | + | chr1.3:70699413-70699432 | None:intergenic | 30.0% | |
| TAAAATTATGGCATCTAGTC+AGG | - | chr1.3:70700388-70700407 | MS.gene006407:intron | 30.0% | |
| TAAATATCAATACAGCAAGC+AGG | + | chr1.3:70702055-70702074 | None:intergenic | 30.0% | |
| TAATAATCTAGCAATAAGGC+TGG | + | chr1.3:70702720-70702739 | None:intergenic | 30.0% | |
| TAATGTTTAGTGAGAGTGAA+GGG | - | chr1.3:70697871-70697890 | MS.gene006407:intron | 30.0% | |
| TATCATTCAAATCAATGGGA+AGG | + | chr1.3:70701893-70701912 | None:intergenic | 30.0% | |
| TGACTATTATTACTACCGAT+TGG | + | chr1.3:70698576-70698595 | None:intergenic | 30.0% | |
| TTAACCATACTTGTATTTGC+AGG | - | chr1.3:70699055-70699074 | MS.gene006407:intron | 30.0% | |
| TTACAGATGATTCCATTAAG+CGG | - | chr1.3:70700627-70700646 | MS.gene006407:CDS | 30.0% | |
| TTATCAATAGGTAAGTTGCA+AGG | + | chr1.3:70699170-70699189 | None:intergenic | 30.0% | |
| TTATTTGAAGGATTATCCTG+GGG | + | chr1.3:70699125-70699144 | None:intergenic | 30.0% | |
| TTGTTCATTTACTAGATGCA+TGG | + | chr1.3:70700348-70700367 | None:intergenic | 30.0% | |
| ! | AACTTCACAACTATGGTTTT+GGG | + | chr1.3:70702544-70702563 | None:intergenic | 30.0% |
| ! | AATGTGTGTTGATATATGGA+AGG | - | chr1.3:70698048-70698067 | MS.gene006407:CDS | 30.0% |
| ! | ACCTATTTTCAATAACCACA+CGG | - | chr1.3:70699772-70699791 | MS.gene006407:intron | 30.0% |
| ! | CAAATGACAATTTTCTACTG+TGG | - | chr1.3:70698927-70698946 | MS.gene006407:intron | 30.0% |
| ! | CTTTTAGCCAAGTAATATAC+GGG | + | chr1.3:70701191-70701210 | None:intergenic | 30.0% |
| ! | CTTTTTCCACTAGATAAGAT+AGG | + | chr1.3:70700784-70700803 | None:intergenic | 30.0% |
| ! | GATGAATGTGTGTTGATATA+TGG | - | chr1.3:70698044-70698063 | MS.gene006407:CDS | 30.0% |
| ! | TCCATTCAAGTTCTTAACAT+TGG | - | chr1.3:70698853-70698872 | MS.gene006407:intron | 30.0% |
| ! | TTATTACTCTGCCTTTTTAG+GGG | - | chr1.3:70701687-70701706 | MS.gene006407:intron | 30.0% |
| ! | TTGTTGCTTATAACAGTAAC+CGG | + | chr1.3:70702188-70702207 | None:intergenic | 30.0% |
| !! | ACTGCTGCATTTTTATTTGA+AGG | + | chr1.3:70699137-70699156 | None:intergenic | 30.0% |
| !! | CCCATTGATTTGAATGATAA+AGG | - | chr1.3:70701894-70701913 | MS.gene006407:intron | 30.0% |
| !! | TGGTTTTACAGATAAAATGG+TGG | - | chr1.3:70700436-70700455 | MS.gene006407:intron | 30.0% |
| !! | TTAGAATTAGGTTGGGAAAT+TGG | - | chr1.3:70697972-70697991 | MS.gene006407:CDS | 30.0% |
| !!! | AATTGCCAGTTTTGTTAATG+TGG | - | chr1.3:70698536-70698555 | MS.gene006407:intron | 30.0% |
| !!! | AATTGCTACTTTTAGAGTAC+AGG | - | chr1.3:70700941-70700960 | MS.gene006407:intron | 30.0% |
| !!! | TAAGCAACAAACCACTTTTT+AGG | - | chr1.3:70702198-70702217 | MS.gene006407:CDS | 30.0% |
| !!! | TGTAGCCTTTTTTTTTAGCT+TGG | - | chr1.3:70699405-70699424 | MS.gene006407:intron | 30.0% |
| AAATGTCATCTTCAGTGAGT+TGG | + | chr1.3:70697033-70697052 | None:intergenic | 35.0% | |
| AACACAGTAGAAATACAGAC+AGG | - | chr1.3:70702450-70702469 | MS.gene006407:intron | 35.0% | |
| AACTATCACAATCCAATGCT+TGG | - | chr1.3:70699730-70699749 | MS.gene006407:intron | 35.0% | |
| AAGATCACAATAGCATGACT+CGG | + | chr1.3:70700677-70700696 | None:intergenic | 35.0% | |
| AATGGAGAACTTCACAACTA+TGG | + | chr1.3:70702551-70702570 | None:intergenic | 35.0% | |
| ACAATTTGTGCACAATTCCT+TGG | - | chr1.3:70702358-70702377 | MS.gene006407:CDS | 35.0% | |
| ACAGCAGATGATATTTGTGA+TGG | - | chr1.3:70702658-70702677 | MS.gene006407:intron | 35.0% | |
| ACTTAAAAAGTGGTAACACG+AGG | + | chr1.3:70701642-70701661 | None:intergenic | 35.0% | |
| ATATTCATCTACGGTTGGAA+TGG | + | chr1.3:70702398-70702417 | None:intergenic | 35.0% | |
| ATGCTATCAAGCTATCAAAC+TGG | + | chr1.3:70699943-70699962 | None:intergenic | 35.0% | |
| ATGGAAGCAAGAGATGTTAA+AGG | + | chr1.3:70698639-70698658 | None:intergenic | 35.0% | |
| ATGTTCACCCGTATATTACT+TGG | - | chr1.3:70701181-70701200 | MS.gene006407:intron | 35.0% | |
| CAAACAGGTAGTTAGCAATT+GGG | - | chr1.3:70699233-70699252 | MS.gene006407:intron | 35.0% | |
| CACTAGATAAGATAGGAAAC+AGG | + | chr1.3:70700777-70700796 | None:intergenic | 35.0% | |
| CATCCCAGTGATTTAAAAAC+CGG | + | chr1.3:70700021-70700040 | None:intergenic | 35.0% | |
| CATGGCAACATTTGTAAGTT+AGG | - | chr1.3:70700122-70700141 | MS.gene006407:intron | 35.0% | |
| CGCTTGACCATTTATAGAAA+TGG | + | chr1.3:70699856-70699875 | None:intergenic | 35.0% | |
| CTAATGTTTAGTGAGAGTGA+AGG | - | chr1.3:70697870-70697889 | MS.gene006407:intron | 35.0% | |
| CTGTTTCCTATCTTATCTAG+TGG | - | chr1.3:70700775-70700794 | MS.gene006407:intron | 35.0% | |
| CTTAAAAAGTGGTAACACGA+GGG | + | chr1.3:70701641-70701660 | None:intergenic | 35.0% | |
| CTTTCTGCTAGTCAATATGA+AGG | - | chr1.3:70702487-70702506 | MS.gene006407:intron | 35.0% | |
| GAAGAAGAAAGAGAAAGAGA+AGG | + | chr1.3:70697112-70697131 | None:intergenic | 35.0% | |
| GATAAATAAGCACTTGCAGA+AGG | - | chr1.3:70699363-70699382 | MS.gene006407:intron | 35.0% | |
| GGAGTGGATGGAAAATATTT+AGG | - | chr1.3:70698084-70698103 | MS.gene006407:intron | 35.0% | |
| GTCTAATATTCATCTACGGT+TGG | + | chr1.3:70702403-70702422 | None:intergenic | 35.0% | |
| TACAGATGATTCCATTAAGC+GGG | - | chr1.3:70700628-70700647 | MS.gene006407:CDS | 35.0% | |
| TATAAAAGATGTAGAGGGTC+AGG | - | chr1.3:70701519-70701538 | MS.gene006407:intron | 35.0% | |
| TCAAACAGGTAGTTAGCAAT+TGG | - | chr1.3:70699232-70699251 | MS.gene006407:intron | 35.0% | |
| TGAGATTGTCAGTACTTTGA+TGG | + | chr1.3:70698291-70698310 | None:intergenic | 35.0% | |
| TGTGACTATGTCAAAGTCAA+TGG | + | chr1.3:70699517-70699536 | None:intergenic | 35.0% | |
| TTACTGCAAGACATGAATGA+TGG | + | chr1.3:70700921-70700940 | None:intergenic | 35.0% | |
| TTATGCCATTCTTTGTTGGA+AGG | - | chr1.3:70698676-70698695 | MS.gene006407:intron | 35.0% | |
| TTTCTATAAATGGTCAAGCG+TGG | - | chr1.3:70699856-70699875 | MS.gene006407:intron | 35.0% | |
| ! | ACAGTAAGAATCTGCTACTT+AGG | + | chr1.3:70702619-70702638 | None:intergenic | 35.0% |
| ! | ACATGCATGGAATCTTTTGA+GGG | + | chr1.3:70701071-70701090 | None:intergenic | 35.0% |
| ! | ACGCATATTTTGTACATGCA+TGG | + | chr1.3:70701084-70701103 | None:intergenic | 35.0% |
| ! | AGTTTGATAGCTTGATAGCA+TGG | - | chr1.3:70699942-70699961 | MS.gene006407:intron | 35.0% |
| ! | CCTATTTTCAATAACCACAC+GGG | - | chr1.3:70699773-70699792 | MS.gene006407:intron | 35.0% |
| ! | GAACTTCACAACTATGGTTT+TGG | + | chr1.3:70702545-70702564 | None:intergenic | 35.0% |
| ! | GACAATTTTCTACTGTGGTA+AGG | - | chr1.3:70698932-70698951 | MS.gene006407:intron | 35.0% |
| ! | GGTTCTCATAATTTGAGGTA+TGG | + | chr1.3:70701473-70701492 | None:intergenic | 35.0% |
| ! | TACATGCATGGAATCTTTTG+AGG | + | chr1.3:70701072-70701091 | None:intergenic | 35.0% |
| ! | TTGAGCTTTTCTTTGTCACT+GGG | - | chr1.3:70698113-70698132 | MS.gene006407:intron | 35.0% |
| ! | TTTGAGCTTTTCTTTGTCAC+TGG | - | chr1.3:70698112-70698131 | MS.gene006407:intron | 35.0% |
| !! | AAGCCGGTTTTTAAATCACT+GGG | - | chr1.3:70700015-70700034 | MS.gene006407:intron | 35.0% |
| !! | CTGAAAAAAGTGTTGCGTTA+GGG | - | chr1.3:70698603-70698622 | MS.gene006407:intron | 35.0% |
| AAAAACAAAGGCCCGCTTAA+TGG | + | chr1.3:70700642-70700661 | None:intergenic | 40.0% | |
| AAATTTGATGCGAGCACAGA+GGG | - | chr1.3:70698880-70698899 | MS.gene006407:intron | 40.0% | |
| AAGCTCGTGAATTCCAAAGT+GGG | + | chr1.3:70700884-70700903 | None:intergenic | 40.0% | |
| AAGGTCCAAAGCAGTATCTT+CGG | + | chr1.3:70697557-70697576 | None:intergenic | 40.0% | |
| AATTGATCACGTGTCAGTAC+CGG | - | chr1.3:70701014-70701033 | MS.gene006407:intron | 40.0% | |
| ACATCTTTACCCACCTTATC+CGG | + | chr1.3:70698981-70699000 | None:intergenic | 40.0% | |
| ACGACTTGAATTCCCATTTG+AGG | + | chr1.3:70701793-70701812 | None:intergenic | 40.0% | |
| ACTGGGATGTATGTATTCTG+TGG | - | chr1.3:70698130-70698149 | MS.gene006407:intron | 40.0% | |
| AGAAAAATGGAGAACAGACC+CGG | + | chr1.3:70697647-70697666 | None:intergenic | 40.0% | |
| AGACTCCTTCCAACAAAGAA+TGG | + | chr1.3:70698684-70698703 | None:intergenic | 40.0% | |
| AGATCACAATAGCATGACTC+GGG | + | chr1.3:70700676-70700695 | None:intergenic | 40.0% | |
| AGGTATGGAAGCTTGATACA+GGG | + | chr1.3:70701458-70701477 | None:intergenic | 40.0% | |
| ATCGGTATTCGGAGTGAATT+TGG | + | chr1.3:70700061-70700080 | None:intergenic | 40.0% | |
| ATCTTGAAAAGCGAAAGGAC+AGG | - | chr1.3:70701569-70701588 | MS.gene006407:intron | 40.0% | |
| ATGGAAGGTGAATCTGTTTG+TGG | - | chr1.3:70698063-70698082 | MS.gene006407:CDS | 40.0% | |
| ATTCGAACCGATTATCCCTT+CGG | - | chr1.3:70699980-70699999 | MS.gene006407:intron | 40.0% | |
| ATTCTTTGTTGGAAGGAGTC+TGG | - | chr1.3:70698683-70698702 | MS.gene006407:intron | 40.0% | |
| CAGGTGAAGTAGATTTCTGA+AGG | + | chr1.3:70697576-70697595 | None:intergenic | 40.0% | |
| CAGTGATTTAAAAACCGGCT+TGG | + | chr1.3:70700016-70700035 | None:intergenic | 40.0% | |
| CCCGTGTGGTTATTGAAAAT+AGG | + | chr1.3:70699776-70699795 | None:intergenic | 40.0% | |
| CGCAGATTCCTCAAAGATAA+AGG | - | chr1.3:70697076-70697095 | MS.gene006407:intron | 40.0% | |
| GAAGGATTGTTGTGTCAGTA+GGG | + | chr1.3:70699205-70699224 | None:intergenic | 40.0% | |
| GATAGGAAACAGGGATCAAA+TGG | + | chr1.3:70700767-70700786 | None:intergenic | 40.0% | |
| GCACTTATGCCATTCTTTGT+TGG | - | chr1.3:70698672-70698691 | MS.gene006407:intron | 40.0% | |
| GCGATATCTTGAAAAGCGAA+AGG | - | chr1.3:70701564-70701583 | MS.gene006407:intron | 40.0% | |
| GCTAGATATCAACTGAGAGA+AGG | - | chr1.3:70698370-70698389 | MS.gene006407:intron | 40.0% | |
| GCTGGTGTATCACCAATTAT+TGG | + | chr1.3:70702702-70702721 | None:intergenic | 40.0% | |
| GGTAAGGTGAATGTCTATGA+TGG | - | chr1.3:70698948-70698967 | MS.gene006407:intron | 40.0% | |
| GTTAACAACGTTGGCATCAT+TGG | + | chr1.3:70697620-70697639 | None:intergenic | 40.0% | |
| GTTGAGCATGTTCATCTTCT+AGG | + | chr1.3:70700251-70700270 | None:intergenic | 40.0% | |
| TAAATTTGATGCGAGCACAG+AGG | - | chr1.3:70698879-70698898 | MS.gene006407:intron | 40.0% | |
| TAACTGCTGAATAGTAGCAC+CGG | + | chr1.3:70701036-70701055 | None:intergenic | 40.0% | |
| TCGGGTGAAAAAACACAACA+CGG | + | chr1.3:70701131-70701150 | None:intergenic | 40.0% | |
| TGAAGGATTGTTGTGTCAGT+AGG | + | chr1.3:70699206-70699225 | None:intergenic | 40.0% | |
| TGACTGTGTCAGTATCATTC+CGG | + | chr1.3:70697779-70697798 | None:intergenic | 40.0% | |
| TGGAACTACTATCGAAACCA+AGG | + | chr1.3:70702378-70702397 | None:intergenic | 40.0% | |
| TGGCAAGATATTCATGCAAG+AGG | + | chr1.3:70699006-70699025 | None:intergenic | 40.0% | |
| TTCTTTGTTGGAAGGAGTCT+GGG | - | chr1.3:70698684-70698703 | MS.gene006407:intron | 40.0% | |
| ! | AAATATACCAAGCGCTGTGT+TGG | - | chr1.3:70698469-70698488 | MS.gene006407:intron | 40.0% |
| ! | CATGCATGGAATCTTTTGAG+GGG | + | chr1.3:70701070-70701089 | None:intergenic | 40.0% |
| ! | GTGAAGTGGGAGATGATTTT+TGG | - | chr1.3:70698016-70698035 | MS.gene006407:CDS | 40.0% |
| ! | GTGCTACTATTCAGCAGTTA+CGG | - | chr1.3:70701036-70701055 | MS.gene006407:intron | 40.0% |
| ! | TCAATGGGAAGGGTAACTTT+TGG | + | chr1.3:70701882-70701901 | None:intergenic | 40.0% |
| ! | TTGAATTCCCATTTGAGGCA+TGG | + | chr1.3:70701788-70701807 | None:intergenic | 40.0% |
| ! | TTTTATCCTCTCATGCTCCA+TGG | - | chr1.3:70697185-70697204 | MS.gene006407:intron | 40.0% |
| !! | ATTTAAAAACCGGCTTGGAC+CGG | + | chr1.3:70700011-70700030 | None:intergenic | 40.0% |
| !! | CAAGCCGGTTTTTAAATCAC+TGG | - | chr1.3:70700014-70700033 | MS.gene006407:intron | 40.0% |
| !! | CAATCCAATGCTTGGTTTGT+TGG | - | chr1.3:70699738-70699757 | MS.gene006407:intron | 40.0% |
| !! | CCTGAAAAAAGTGTTGCGTT+AGG | - | chr1.3:70698602-70698621 | MS.gene006407:intron | 40.0% |
| !! | CTTTTTAGGGGAAGATCGAA+GGG | - | chr1.3:70701699-70701718 | MS.gene006407:intron | 40.0% |
| !! | TCTTCAGTGAGTTGGTTAAG+AGG | + | chr1.3:70697025-70697044 | None:intergenic | 40.0% |
| !!! | CCTAACGCAACACTTTTTTC+AGG | + | chr1.3:70698605-70698624 | None:intergenic | 40.0% |
| !!! | CGGGCCTTTGTTTTTTTTCT+TGG | - | chr1.3:70700647-70700666 | MS.gene006407:CDS | 40.0% |
| ACCTACTGACGATGATACAC+CGG | - | chr1.3:70697447-70697466 | MS.gene006407:intron | 45.0% | |
| AGCTCGTGAATTCCAAAGTG+GGG | + | chr1.3:70700883-70700902 | None:intergenic | 45.0% | |
| AGGTCCAAAGCAGTATCTTC+GGG | + | chr1.3:70697556-70697575 | None:intergenic | 45.0% | |
| AGGTGAATCTGTTTGTGGAG+TGG | - | chr1.3:70698068-70698087 | MS.gene006407:intron | 45.0% | |
| ATCCTTCAAGTCGCTCAAAC+AGG | - | chr1.3:70699218-70699237 | MS.gene006407:intron | 45.0% | |
| ATTTGCCCAAATGACCCACT+AGG | + | chr1.3:70698912-70698931 | None:intergenic | 45.0% | |
| CATTAAACCAACACAGCGCT+TGG | + | chr1.3:70698479-70698498 | None:intergenic | 45.0% | |
| CCATTTGTGACAAGCAGCAA+AGG | - | chr1.3:70702566-70702585 | MS.gene006407:intron | 45.0% | |
| CCTTCGATCTTCCCCTAAAA+AGG | + | chr1.3:70701701-70701720 | None:intergenic | 45.0% | |
| CGGGTGAAAAAACACAACAC+GGG | + | chr1.3:70701130-70701149 | None:intergenic | 45.0% | |
| CGTGCCTGCAAATACAAGTA+TGG | + | chr1.3:70699062-70699081 | None:intergenic | 45.0% | |
| CTTTCTCCCTGTAATGCAGA+GGG | + | chr1.3:70700466-70700485 | None:intergenic | 45.0% | |
| GAAAAATGGAGAACAGACCC+GGG | + | chr1.3:70697646-70697665 | None:intergenic | 45.0% | |
| GAAGCTCGTGAATTCCAAAG+TGG | + | chr1.3:70700885-70700904 | None:intergenic | 45.0% | |
| GAATCTGTTTGTGGAGTGGA+TGG | - | chr1.3:70698072-70698091 | MS.gene006407:intron | 45.0% | |
| GAGGTATGGAAGCTTGATAC+AGG | + | chr1.3:70701459-70701478 | None:intergenic | 45.0% | |
| GATTATCCCTTCGGTTCAAC+CGG | - | chr1.3:70699989-70700008 | MS.gene006407:intron | 45.0% | |
| GGAATACCCTCTGCATTACA+GGG | - | chr1.3:70700457-70700476 | MS.gene006407:intron | 45.0% | |
| GGTTGAACCGAAGGGATAAT+CGG | + | chr1.3:70699990-70700009 | None:intergenic | 45.0% | |
| GTCACCAACAAACCAAGCAT+TGG | + | chr1.3:70699745-70699764 | None:intergenic | 45.0% | |
| TACCTGTTTGAGCGACTTGA+AGG | + | chr1.3:70699223-70699242 | None:intergenic | 45.0% | |
| TCATACCATCATGTCAGTGC+AGG | + | chr1.3:70701371-70701390 | None:intergenic | 45.0% | |
| TCGACGAACCCAGTATAAAC+CGG | + | chr1.3:70699913-70699932 | None:intergenic | 45.0% | |
| TCTTTGTTGGAAGGAGTCTG+GGG | - | chr1.3:70698685-70698704 | MS.gene006407:intron | 45.0% | |
| TGAAGCTCCATGCCTCAAAT+GGG | - | chr1.3:70701778-70701797 | MS.gene006407:intron | 45.0% | |
| TGAAGGATTATCCTGGGGAA+AGG | + | chr1.3:70699120-70699139 | None:intergenic | 45.0% | |
| TGGAATACCCTCTGCATTAC+AGG | - | chr1.3:70700456-70700475 | MS.gene006407:intron | 45.0% | |
| TGTCAGTATCATTCCGGTGT+CGG | + | chr1.3:70697773-70697792 | None:intergenic | 45.0% | |
| TTGTTGTGTCAGTAGGGAAG+AGG | + | chr1.3:70699199-70699218 | None:intergenic | 45.0% | |
| TTTGTGACAAGCAGCAAAGG+AGG | - | chr1.3:70702569-70702588 | MS.gene006407:intron | 45.0% | |
| ! | CAAGCAGCAAAGGAGGATTT+TGG | - | chr1.3:70702576-70702595 | MS.gene006407:intron | 45.0% |
| ! | CCTTTGCTGCTTGTCACAAA+TGG | + | chr1.3:70702569-70702588 | None:intergenic | 45.0% |
| ! | CTTAACCTGCACTGACATGA+TGG | - | chr1.3:70701363-70701382 | MS.gene006407:intron | 45.0% |
| ! | CTTTGAGAGAAATCACCTGC+TGG | + | chr1.3:70697417-70697436 | None:intergenic | 45.0% |
| ! | TGTCTATGATGGAGTTTCGC+CGG | - | chr1.3:70698959-70698978 | MS.gene006407:intron | 45.0% |
| !! | ACCTGTTTCTGAAAGACCCA+CGG | - | chr1.3:70697591-70697610 | MS.gene006407:intron | 45.0% |
| !! | CCTTTTTAGGGGAAGATCGA+AGG | - | chr1.3:70701698-70701717 | MS.gene006407:intron | 45.0% |
| !! | TTGGCATCATTGGTTTCCGT+GGG | + | chr1.3:70697610-70697629 | None:intergenic | 45.0% |
| !! | TTAATGTAATTAAATTAATT+GGG | - | chr1.3:70697283-70697302 | MS.gene006407:intron | 5.0% |
| !! | TTTAATGTAATTAAATTAAT+TGG | - | chr1.3:70697282-70697301 | MS.gene006407:intron | 5.0% |
| !! | TTTATTGAATTTAAATTATT+TGG | + | chr1.3:70698784-70698803 | None:intergenic | 5.0% |
| AAGACGACACGTGTTCGTAC+AGG | - | chr1.3:70697355-70697374 | MS.gene006407:intron | 50.0% | |
| AGACGACACGTGTTCGTACA+GGG | - | chr1.3:70697356-70697375 | MS.gene006407:intron | 50.0% | |
| AGGATTATCCTGGGGAAAGG+AGG | + | chr1.3:70699117-70699136 | None:intergenic | 50.0% | |
| CACAACACGGGTATGAGTAC+TGG | + | chr1.3:70701118-70701137 | None:intergenic | 50.0% | |
| CACAACTCGTGATGCTGGTA+GGG | - | chr1.3:70700490-70700509 | MS.gene006407:intron | 50.0% | |
| CCTCTGCATTACAGGGAGAA+AGG | - | chr1.3:70700464-70700483 | MS.gene006407:intron | 50.0% | |
| CCTTTCTCCCTGTAATGCAG+AGG | + | chr1.3:70700467-70700486 | None:intergenic | 50.0% | |
| CTCTCATGCTCCATGGTTTC+CGG | - | chr1.3:70697192-70697211 | MS.gene006407:intron | 50.0% | |
| CTGGAAACTAGAGGCAGTCT+AGG | + | chr1.3:70701840-70701859 | None:intergenic | 50.0% | |
| GAGGATGGATCGGAAGGAAA+CGG | + | chr1.3:70696996-70697015 | None:intergenic | 50.0% | |
| GCCTTCCTGGAACAAATCAC+AGG | - | chr1.3:70697387-70697406 | MS.gene006407:intron | 50.0% | |
| GGATCCCGAAGATACTGCTT+TGG | - | chr1.3:70697549-70697568 | MS.gene006407:intron | 50.0% | |
| GGGGCTGACATCCAAAACTA+AGG | + | chr1.3:70700864-70700883 | None:intergenic | 50.0% | |
| GGTTTATACTGGGTTCGTCG+AGG | - | chr1.3:70699912-70699931 | MS.gene006407:intron | 50.0% | |
| GTGAAGCTCCATGCCTCAAA+TGG | - | chr1.3:70701777-70701796 | MS.gene006407:intron | 50.0% | |
| GTTAAGAGGTCTGTCGAGGA+TGG | + | chr1.3:70697011-70697030 | None:intergenic | 50.0% | |
| GTTGGTTAAGAGGTCTGTCG+AGG | + | chr1.3:70697015-70697034 | None:intergenic | 50.0% | |
| TCCGTGGGTCTTTCAGAAAC+AGG | + | chr1.3:70697595-70697614 | None:intergenic | 50.0% | |
| TCGAAGGGCAAGAAACTGAC+TGG | - | chr1.3:70701714-70701733 | MS.gene006407:intron | 50.0% | |
| TCTTCGGGATCCAAAGCCTT+CGG | + | chr1.3:70697541-70697560 | None:intergenic | 50.0% | |
| TGATGGAGTTTCGCCGGATA+AGG | - | chr1.3:70698965-70698984 | MS.gene006407:intron | 50.0% | |
| TGGAAGTTGTTCTCAGGAGC+CGG | + | chr1.3:70697214-70697233 | None:intergenic | 50.0% | |
| TTATCCTGGGGAAAGGAGGA+TGG | + | chr1.3:70699113-70699132 | None:intergenic | 50.0% | |
| TTTGGATGTCAGCCCCACTT+TGG | - | chr1.3:70700868-70700887 | MS.gene006407:CDS | 50.0% | |
| ! | AGACTGCCTCTAGTTTCCAG+TGG | - | chr1.3:70701840-70701859 | MS.gene006407:intron | 50.0% |
| ! | ATCATTCCGGTGTCGGAGTT+AGG | + | chr1.3:70697766-70697785 | None:intergenic | 50.0% |
| ! | GCACACCTAGTGGGTCATTT+GGG | - | chr1.3:70698904-70698923 | MS.gene006407:intron | 50.0% |
| ! | TCATTCCGGTGTCGGAGTTA+GGG | + | chr1.3:70697765-70697784 | None:intergenic | 50.0% |
| ! | TGCACACCTAGTGGGTCATT+TGG | - | chr1.3:70698903-70698922 | MS.gene006407:intron | 50.0% |
| ! | TGGGAAGGGTAACTTTTGGC+AGG | + | chr1.3:70701878-70701897 | None:intergenic | 50.0% |
| ! | TTTGAGGCATGGAGCTTCAC+TGG | + | chr1.3:70701777-70701796 | None:intergenic | 50.0% |
| !! | GATCGCCTGTGATTTGTTCC+AGG | + | chr1.3:70697395-70697414 | None:intergenic | 50.0% |
| !! | GCCTGTGATTTGTTCCAGGA+AGG | + | chr1.3:70697391-70697410 | None:intergenic | 50.0% |
| !! | GTTGGCATCATTGGTTTCCG+TGG | + | chr1.3:70697611-70697630 | None:intergenic | 50.0% |
| AAATGGAGAACAGACCCGGG+AGG | + | chr1.3:70697643-70697662 | None:intergenic | 55.0% | |
| AATGGAGAACAGACCCGGGA+GGG | + | chr1.3:70697642-70697661 | None:intergenic | 55.0% | |
| ACTAGAGGCAGTCTAGGCTG+TGG | + | chr1.3:70701834-70701853 | None:intergenic | 55.0% | |
| AGGCATGGAGCTTCACTGGA+AGG | + | chr1.3:70701773-70701792 | None:intergenic | 55.0% | |
| ATGTCCATCCTCCTTTCCCC+AGG | - | chr1.3:70699106-70699125 | MS.gene006407:intron | 55.0% | |
| CAAATCACAGGCGATCCAGC+AGG | - | chr1.3:70697399-70697418 | MS.gene006407:intron | 55.0% | |
| CCAACGTTGTTAACCCTCCC+GGG | - | chr1.3:70697626-70697645 | MS.gene006407:intron | 55.0% | |
| CCCAGTATAAACCGGCGACT+CGG | + | chr1.3:70699905-70699924 | None:intergenic | 55.0% | |
| CGAAACCCTAACTCCGACAC+CGG | - | chr1.3:70697757-70697776 | MS.gene006407:intron | 55.0% | |
| CGGAAACCATGGAGCATGAG+AGG | + | chr1.3:70697194-70697213 | None:intergenic | 55.0% | |
| CTTGGACCGGTTGAACCGAA+GGG | + | chr1.3:70699998-70700017 | None:intergenic | 55.0% | |
| GAGGTCTGTCGAGGATGGAT+CGG | + | chr1.3:70697006-70697025 | None:intergenic | 55.0% | |
| GCACAACTCGTGATGCTGGT+AGG | - | chr1.3:70700489-70700508 | MS.gene006407:intron | 55.0% | |
| GCCAACGTTGTTAACCCTCC+CGG | - | chr1.3:70697625-70697644 | MS.gene006407:intron | 55.0% | |
| GCCGGTGTATCATCGTCAGT+AGG | + | chr1.3:70697451-70697470 | None:intergenic | 55.0% | |
| GCTGAGCCACTGGAAACTAG+AGG | + | chr1.3:70701849-70701868 | None:intergenic | 55.0% | |
| GGAGTTTCGCCGGATAAGGT+GGG | - | chr1.3:70698969-70698988 | MS.gene006407:intron | 55.0% | |
| TAGGAAAACTGCCGAGTCGC+CGG | - | chr1.3:70699891-70699910 | MS.gene006407:intron | 55.0% | |
| TCTGTCGAGGATGGATCGGA+AGG | + | chr1.3:70697002-70697021 | None:intergenic | 55.0% | |
| TGGAGTTTCGCCGGATAAGG+TGG | - | chr1.3:70698968-70698987 | MS.gene006407:intron | 55.0% | |
| TTCTCAGGAGCCGGAAACCA+TGG | + | chr1.3:70697205-70697224 | None:intergenic | 55.0% | |
| ! | ACAGAGGGTGCACACCTAGT+GGG | - | chr1.3:70698895-70698914 | MS.gene006407:intron | 55.0% |
| ! | CAGGTTTTCAGCTGAGCCAC+TGG | + | chr1.3:70701859-70701878 | None:intergenic | 55.0% |
| ! | GATGATACACCGGCTACCGT+CGG | - | chr1.3:70697457-70697476 | MS.gene006407:intron | 55.0% |
| ! | GGAAGCACAACTCGTGATGC+TGG | - | chr1.3:70700485-70700504 | MS.gene006407:intron | 55.0% |
| ! | TTGGAAGGAGTCTGGGGTAG+TGG | - | chr1.3:70698691-70698710 | MS.gene006407:intron | 55.0% |
| !! | CCGAGTCGCCGGTTTATACT+GGG | - | chr1.3:70699902-70699921 | MS.gene006407:intron | 55.0% |
| !!! | AGCGTGGCTCAGCTGGTTTT+AGG | - | chr1.3:70699872-70699891 | MS.gene006407:intron | 55.0% |
| AAAGCCTTCGGCGGAGGTTG+AGG | + | chr1.3:70697529-70697548 | None:intergenic | 60.0% | |
| AGAGGCAGTCTAGGCTGTGG+TGG | + | chr1.3:70701831-70701850 | None:intergenic | 60.0% | |
| ATGGTCAAGCGTGGCTCAGC+TGG | - | chr1.3:70699865-70699884 | MS.gene006407:intron | 60.0% | |
| CCCGGGAGGGTTAACAACGT+TGG | + | chr1.3:70697629-70697648 | None:intergenic | 60.0% | |
| GCAGGGATCTTACTCCCGTG+TGG | + | chr1.3:70699790-70699809 | None:intergenic | 60.0% | |
| GCTTGGACCGGTTGAACCGA+AGG | + | chr1.3:70699999-70700018 | None:intergenic | 60.0% | |
| GTGTTCGTACAGGGATGCGC+AGG | - | chr1.3:70697365-70697384 | MS.gene006407:intron | 60.0% | |
| TCAACCTCCGCCGAAGGCTT+TGG | - | chr1.3:70697528-70697547 | MS.gene006407:intron | 60.0% | |
| TCGGGATCCAAAGCCTTCGG+CGG | + | chr1.3:70697538-70697557 | None:intergenic | 60.0% | |
| TCGGTTCAACCGGTCCAAGC+CGG | - | chr1.3:70699999-70700018 | MS.gene006407:intron | 60.0% | |
| ! | CACAGAGGGTGCACACCTAG+TGG | - | chr1.3:70698894-70698913 | MS.gene006407:intron | 60.0% |
| !! | GCCGAGTCGCCGGTTTATAC+TGG | - | chr1.3:70699901-70699920 | MS.gene006407:intron | 60.0% |
| !! | GTGGTGATGGCGGTGAATGG+CGG | + | chr1.3:70697497-70697516 | None:intergenic | 60.0% |
| !! | GTGGTGGTGATGGCGGTGAA+TGG | + | chr1.3:70697500-70697519 | None:intergenic | 60.0% |
| ACACCAACGCCGACGGTAGC+CGG | + | chr1.3:70697469-70697488 | None:intergenic | 65.0% | |
| CCTTCGGCGGAGGTTGAGGA+GGG | + | chr1.3:70697525-70697544 | None:intergenic | 65.0% | |
| GGAGGAGACACCAACGCCGA+CGG | + | chr1.3:70697476-70697495 | None:intergenic | 65.0% | |
| GGATCCAAAGCCTTCGGCGG+AGG | + | chr1.3:70697535-70697554 | None:intergenic | 65.0% | |
| ! | GAGGTTGAGGAGGGTGGTGG+TGG | + | chr1.3:70697516-70697535 | None:intergenic | 65.0% |
| !! | GAGGAGGGTGGTGGTGGTGA+TGG | + | chr1.3:70697510-70697529 | None:intergenic | 65.0% |
| !! | GAGGGTGGTGGTGGTGATGG+CGG | + | chr1.3:70697507-70697526 | None:intergenic | 65.0% |
| !! | GTGATGGCGGTGAATGGCGG+AGG | + | chr1.3:70697494-70697513 | None:intergenic | 65.0% |
| CAGGGATGCGCAGGCCTTCC+TGG | - | chr1.3:70697374-70697393 | MS.gene006407:intron | 70.0% | |
| CCCTCCTCAACCTCCGCCGA+AGG | - | chr1.3:70697522-70697541 | MS.gene006407:intron | 70.0% | |
| GCCTTCGGCGGAGGTTGAGG+AGG | + | chr1.3:70697526-70697545 | None:intergenic | 70.0% | |
| GCGGAGGTTGAGGAGGGTGG+TGG | + | chr1.3:70697519-70697538 | None:intergenic | 70.0% | |
| TCGGCGGAGGTTGAGGAGGG+TGG | + | chr1.3:70697522-70697541 | None:intergenic | 70.0% | |
| ! | ACACCGGCTACCGTCGGCGT+TGG | - | chr1.3:70697463-70697482 | MS.gene006407:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 70696977 | 70702814 | 70696977 | ID=MS.gene006407 |
| chr1.3 | mRNA | 70696977 | 70702814 | 70696977 | ID=MS.gene006407.t1;Parent=MS.gene006407 |
| chr1.3 | exon | 70702694 | 70702814 | 70702694 | ID=MS.gene006407.t1.exon1;Parent=MS.gene006407.t1 |
| chr1.3 | CDS | 70702694 | 70702814 | 70702694 | ID=cds.MS.gene006407.t1;Parent=MS.gene006407.t1 |
| chr1.3 | exon | 70702144 | 70702414 | 70702144 | ID=MS.gene006407.t1.exon2;Parent=MS.gene006407.t1 |
| chr1.3 | CDS | 70702144 | 70702414 | 70702144 | ID=cds.MS.gene006407.t1;Parent=MS.gene006407.t1 |
| chr1.3 | exon | 70700805 | 70700892 | 70700805 | ID=MS.gene006407.t1.exon3;Parent=MS.gene006407.t1 |
| chr1.3 | CDS | 70700805 | 70700892 | 70700805 | ID=cds.MS.gene006407.t1;Parent=MS.gene006407.t1 |
| chr1.3 | exon | 70700552 | 70700714 | 70700552 | ID=MS.gene006407.t1.exon4;Parent=MS.gene006407.t1 |
| chr1.3 | CDS | 70700552 | 70700714 | 70700552 | ID=cds.MS.gene006407.t1;Parent=MS.gene006407.t1 |
| chr1.3 | exon | 70699285 | 70699344 | 70699285 | ID=MS.gene006407.t1.exon5;Parent=MS.gene006407.t1 |
| chr1.3 | CDS | 70699285 | 70699344 | 70699285 | ID=cds.MS.gene006407.t1;Parent=MS.gene006407.t1 |
| chr1.3 | exon | 70698201 | 70698264 | 70698201 | ID=MS.gene006407.t1.exon6;Parent=MS.gene006407.t1 |
| chr1.3 | CDS | 70698201 | 70698264 | 70698201 | ID=cds.MS.gene006407.t1;Parent=MS.gene006407.t1 |
| chr1.3 | exon | 70697876 | 70698084 | 70697876 | ID=MS.gene006407.t1.exon7;Parent=MS.gene006407.t1 |
| chr1.3 | CDS | 70697876 | 70698084 | 70697876 | ID=cds.MS.gene006407.t1;Parent=MS.gene006407.t1 |
| chr1.3 | exon | 70696977 | 70696993 | 70696977 | ID=MS.gene006407.t1.exon8;Parent=MS.gene006407.t1 |
| chr1.3 | CDS | 70696977 | 70696993 | 70696977 | ID=cds.MS.gene006407.t1;Parent=MS.gene006407.t1 |
| Gene Sequence |
| Protein sequence |
