Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene006424.t1 | KEH43828.1 | 75 | 591 | 59 | 5 | 1 | 512 | 1 | 581 | 3.60E-214 | 754.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene006424.t1 | Q9LUI3 | 27.2 | 552 | 322 | 14 | 16 | 513 | 22 | 547 | 3.7e-26 | 121.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene006424.t1 | A0A072VQY2 | 75.0 | 591 | 59 | 5 | 1 | 512 | 1 | 581 | 2.6e-214 | 754.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene006424.t1 | TF | CPP |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene006424.t1 | MTR_1g103230 | 61.893 | 391 | 100 | 8 | 1 | 363 | 1 | 370 | 1.02e-143 | 431 |
MS.gene006424.t1 | MTR_1g103230 | 86.792 | 265 | 26 | 2 | 256 | 512 | 318 | 581 | 2.41e-143 | 429 |
MS.gene006424.t1 | MTR_5g006530 | 33.717 | 608 | 265 | 15 | 16 | 498 | 23 | 617 | 4.46e-77 | 260 |
MS.gene006424.t1 | MTR_5g006530 | 37.731 | 379 | 176 | 7 | 169 | 498 | 26 | 393 | 1.05e-63 | 219 |
MS.gene006424.t1 | MTR_1g103220 | 34.637 | 358 | 125 | 9 | 7 | 355 | 6 | 263 | 3.08e-41 | 150 |
MS.gene006424.t1 | MTR_1g103190 | 49.180 | 183 | 51 | 6 | 258 | 439 | 110 | 251 | 4.36e-34 | 130 |
MS.gene006424.t1 | MTR_1g012020 | 34.701 | 268 | 157 | 9 | 267 | 520 | 389 | 652 | 8.73e-33 | 135 |
MS.gene006424.t1 | MTR_1g103180 | 36.626 | 243 | 108 | 7 | 189 | 420 | 18 | 225 | 2.79e-28 | 117 |
MS.gene006424.t1 | MTR_1g103180 | 73.810 | 42 | 11 | 0 | 15 | 56 | 61 | 102 | 5.01e-13 | 71.2 |
MS.gene006424.t1 | MTR_8g103320 | 41.481 | 135 | 69 | 4 | 368 | 498 | 83 | 211 | 7.55e-23 | 102 |
MS.gene006424.t1 | MTR_6g087590 | 42.222 | 135 | 68 | 4 | 368 | 498 | 128 | 256 | 7.78e-23 | 103 |
MS.gene006424.t1 | MTR_3g110122 | 43.200 | 125 | 68 | 3 | 368 | 492 | 148 | 269 | 2.72e-21 | 98.6 |
MS.gene006424.t1 | MTR_2g049305 | 42.623 | 122 | 58 | 3 | 316 | 433 | 22 | 135 | 1.30e-18 | 87.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene006424.t1 | AT3G22780 | 55.975 | 159 | 67 | 2 | 352 | 508 | 385 | 542 | 6.77e-50 | 184 |
MS.gene006424.t1 | AT4G14770 | 55.263 | 152 | 63 | 2 | 347 | 498 | 338 | 484 | 3.67e-47 | 176 |
MS.gene006424.t1 | AT4G14770 | 55.263 | 152 | 63 | 2 | 347 | 498 | 339 | 485 | 3.86e-47 | 176 |
MS.gene006424.t1 | AT4G14770 | 55.263 | 152 | 63 | 2 | 347 | 498 | 358 | 504 | 4.38e-47 | 176 |
MS.gene006424.t1 | AT3G22760 | 52.500 | 160 | 74 | 2 | 352 | 510 | 188 | 346 | 1.02e-46 | 172 |
MS.gene006424.t1 | AT3G22760 | 52.500 | 160 | 74 | 2 | 352 | 510 | 311 | 469 | 5.25e-46 | 172 |
MS.gene006424.t1 | AT3G04850 | 49.286 | 140 | 70 | 1 | 365 | 504 | 450 | 588 | 6.73e-38 | 149 |
MS.gene006424.t1 | AT5G25790 | 40.000 | 150 | 80 | 4 | 368 | 517 | 95 | 234 | 2.76e-24 | 106 |
MS.gene006424.t1 | AT5G25790 | 38.000 | 150 | 87 | 3 | 368 | 517 | 95 | 238 | 1.59e-23 | 104 |
MS.gene006424.t1 | AT5G25790 | 38.000 | 150 | 87 | 3 | 368 | 517 | 95 | 238 | 2.55e-23 | 103 |
MS.gene006424.t1 | AT2G20110 | 42.636 | 129 | 64 | 4 | 368 | 492 | 119 | 241 | 4.69e-21 | 97.4 |
MS.gene006424.t1 | AT2G20110 | 42.636 | 129 | 64 | 4 | 368 | 492 | 119 | 241 | 4.80e-21 | 97.8 |
MS.gene006424.t1 | AT2G20110 | 42.636 | 129 | 64 | 4 | 368 | 492 | 119 | 241 | 5.24e-21 | 97.4 |
MS.gene006424.t1 | AT4G29000 | 38.931 | 131 | 78 | 2 | 368 | 498 | 132 | 260 | 2.35e-20 | 95.5 |
MS.gene006424.t1 | AT3G16160 | 42.276 | 123 | 66 | 3 | 368 | 490 | 66 | 183 | 1.88e-18 | 87.8 |
Find 108 sgRNAs with CRISPR-Local
Find 358 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCTTGCCAATGTTGCTTTAA+TGG | 0.092114 | 1.3:-70919674 | MS.gene006424:CDS |
TTGAGGGTGGAACAGATATT+TGG | 0.191323 | 1.3:-70914692 | MS.gene006424:CDS |
CCAGAATTCTTTCGAACTTT+AGG | 0.204484 | 1.3:+70917983 | None:intergenic |
CCTAAAGTTCGAAAGAATTC+TGG | 0.241815 | 1.3:-70917983 | MS.gene006424:CDS |
GACGAGTGAAGTGCAATTTA+AGG | 0.271122 | 1.3:-70918814 | MS.gene006424:CDS |
TTGCACTTCACTCGTCCTTT+TGG | 0.274158 | 1.3:+70918821 | None:intergenic |
CTTTGAAGCTGGAGCTTTGT+TGG | 0.274516 | 1.3:+70917850 | None:intergenic |
TCGATTGATCTAGTTTCTTC+TGG | 0.291859 | 1.3:-70918729 | MS.gene006424:CDS |
TACTGGTAGATTGTGGTAAC+AGG | 0.297737 | 1.3:+70919812 | None:intergenic |
GTTCCACCCTCAATTGGTTC+TGG | 0.307524 | 1.3:+70914702 | None:intergenic |
TTTGAAGCTGGAGCTTTGTT+GGG | 0.308021 | 1.3:+70917851 | None:intergenic |
TTTCTGTCTGTTGCGGCTAT+TGG | 0.313269 | 1.3:+70919712 | None:intergenic |
GAATATGGACTCGTCGTTAA+AGG | 0.316508 | 1.3:+70920229 | None:intergenic |
TTGAAGGTGGAACATTTATT+CGG | 0.321966 | 1.3:-70919888 | MS.gene006424:CDS |
ACTGTTGACCCACTTGCTTT+TGG | 0.345247 | 1.3:-70919769 | MS.gene006424:CDS |
CACCCTTCACATTTACAACT+TGG | 0.349859 | 1.3:+70917656 | None:intergenic |
CAAGTACCTCGTGAGGAATA+TGG | 0.357398 | 1.3:+70920214 | None:intergenic |
GCATCATCACTTGAGATTTG+AGG | 0.360494 | 1.3:+70919988 | None:intergenic |
CACCAATGGAGACACATTTA+CGG | 0.379389 | 1.3:-70918914 | MS.gene006424:CDS |
ACAGCCTCAGATGAAAGTTC+AGG | 0.391141 | 1.3:+70920087 | None:intergenic |
CTGCGTCGTCGCTTTGAAGC+TGG | 0.396100 | 1.3:+70917839 | None:intergenic |
TGAGGGTGGAACAGATATTT+GGG | 0.404561 | 1.3:-70914691 | MS.gene006424:CDS |
TGAAATTGAAGACAATCCTT+TGG | 0.408389 | 1.3:-70919737 | MS.gene006424:CDS |
AAGTCATCAGTTCACATTCC+TGG | 0.424450 | 1.3:-70918867 | MS.gene006424:CDS |
AATTGTGGCTGCTTTGCTGC+TGG | 0.427566 | 1.3:-70918121 | MS.gene006424:CDS |
AAGTATCTTCTTGAATTACT+TGG | 0.428004 | 1.3:-70919964 | MS.gene006424:CDS |
ATATCTGTTCCACCCTCAAT+TGG | 0.433921 | 1.3:+70914696 | None:intergenic |
AAGTTATTGTAATCACAATC+TGG | 0.434332 | 1.3:+70919859 | None:intergenic |
ACCCTTCACATTTACAACTT+GGG | 0.434704 | 1.3:+70917657 | None:intergenic |
TGAAGGTGGAACATTTATTC+GGG | 0.437173 | 1.3:-70919887 | MS.gene006424:CDS |
CTCTATGGAGGATTCGTCTC+AGG | 0.438498 | 1.3:-70914754 | MS.gene006424:CDS |
TAGTTTCTGACCACAATTTG+AGG | 0.447183 | 1.3:+70917953 | None:intergenic |
CCCTTCACATTTACAACTTG+GGG | 0.459373 | 1.3:+70917658 | None:intergenic |
CCTCGAATCTCAATTATTGA+AGG | 0.467619 | 1.3:-70914726 | MS.gene006424:CDS |
CTATACACAAGATGACTCTA+TGG | 0.468807 | 1.3:-70914769 | MS.gene006424:CDS |
AGTTAGATCAAAACATGAAA+AGG | 0.487287 | 1.3:-70918776 | MS.gene006424:CDS |
TTCTGGTTCAGAACATGTAA+AGG | 0.491375 | 1.3:-70918712 | MS.gene006424:CDS |
GTCACTATTGAAGAATTGCT+TGG | 0.491448 | 1.3:-70914792 | MS.gene006424:CDS |
TTCCATGTCGTGTGTTTGCA+TGG | 0.497663 | 1.3:-70914902 | MS.gene006424:CDS |
TCTTGTACATCCGTACCATC+TGG | 0.499848 | 1.3:+70919931 | None:intergenic |
TGAAGGGCCAGAACCAATTG+AGG | 0.500874 | 1.3:-70914709 | MS.gene006424:CDS |
GCTATCCATTAAAGCAACAT+TGG | 0.513739 | 1.3:+70919669 | None:intergenic |
TCTGTCAGAGTATCCGCAAA+AGG | 0.520220 | 1.3:-70918671 | MS.gene006424:CDS |
TGGTTCCTCACCTCAAATTG+TGG | 0.524835 | 1.3:-70917963 | MS.gene006424:intron |
GCAGAATACGATGCAAGTGC+AGG | 0.525356 | 1.3:-70917820 | MS.gene006424:CDS |
CGAACTTTAGGAACAAATGC+AGG | 0.526329 | 1.3:+70917995 | None:intergenic |
GGAACAAGTCAGATCTAACT+AGG | 0.530885 | 1.3:-70918533 | MS.gene006424:CDS |
CGAAAATATACATGGTAGGA+AGG | 0.533470 | 1.3:-70917633 | MS.gene006424:CDS |
TGCTTGATTTCTGTCTGTTG+CGG | 0.536356 | 1.3:+70919705 | None:intergenic |
AGAGTATCCGCAAAAGGAAG+AGG | 0.539876 | 1.3:-70918665 | MS.gene006424:CDS |
TTGAAGCTGGAGCTTTGTTG+GGG | 0.541047 | 1.3:+70917852 | None:intergenic |
AGAGAAATTCTAGAGAAAGA+AGG | 0.542831 | 1.3:+70914660 | None:intergenic |
GTTGCGGCTATTGGTTCCAA+AGG | 0.544179 | 1.3:+70919721 | None:intergenic |
TTAAAGGAGATAGAGTATTG+AGG | 0.545460 | 1.3:+70920339 | None:intergenic |
CCTCTTGTGAGTTGGAAACA+AGG | 0.546159 | 1.3:+70920599 | None:intergenic |
TTCAGAACATGTAAAGGAAG+AGG | 0.548580 | 1.3:-70918706 | MS.gene006424:CDS |
ATACAGTTCTGCAAGCTCGC+AGG | 0.548799 | 1.3:-70918039 | MS.gene006424:CDS |
CCTTGTTTCCAACTCACAAG+AGG | 0.548913 | 1.3:-70920599 | MS.gene006424:intron |
TCCGTCAGAGTACTCCCAAA+AGG | 0.555631 | 1.3:-70918836 | MS.gene006424:CDS |
ACTATGACGCTGAACTCACT+TGG | 0.558600 | 1.3:-70920287 | MS.gene006424:CDS |
ATCTCAAGTCTCTGCACCAA+TGG | 0.560130 | 1.3:-70918928 | MS.gene006424:CDS |
GCTGCTGGAGTCTACTGCAC+AGG | 0.566140 | 1.3:-70918106 | MS.gene006424:CDS |
CTCTGACGGAAATCTTCACC+AGG | 0.567030 | 1.3:+70918849 | None:intergenic |
AAACATGAAAAGGACGATGA+AGG | 0.570624 | 1.3:-70918766 | MS.gene006424:CDS |
CAGATCTAACTAGGAAAGGA+GGG | 0.570663 | 1.3:-70918524 | MS.gene006424:CDS |
AAGTCAGATCTAACTAGGAA+AGG | 0.571577 | 1.3:-70918528 | MS.gene006424:CDS |
CCTTCAATAATTGAGATTCG+AGG | 0.572237 | 1.3:+70914726 | None:intergenic |
AGCCGTAAATGTGTCTCCAT+TGG | 0.572557 | 1.3:+70918912 | None:intergenic |
CTCTTGTGAGTTGGAAACAA+GGG | 0.576484 | 1.3:+70920600 | None:intergenic |
GACGCTGAACTCACTTGGCA+TGG | 0.578891 | 1.3:-70920282 | MS.gene006424:CDS |
TTCCATGCAAACACACGACA+TGG | 0.579991 | 1.3:+70914900 | None:intergenic |
TCAGATCTAACTAGGAAAGG+AGG | 0.580562 | 1.3:-70918525 | MS.gene006424:CDS |
CTACAGATTCAACTCATGCA+TGG | 0.581951 | 1.3:-70920035 | MS.gene006424:CDS |
CAAGCAAGAACCAGATGGTA+CGG | 0.582545 | 1.3:-70919941 | MS.gene006424:CDS |
AGTATACAGATGAGCTGTCA+AGG | 0.583545 | 1.3:-70919097 | MS.gene006424:CDS |
TTGCTATTACTGGTAGATTG+TGG | 0.588055 | 1.3:+70919805 | None:intergenic |
AAATCCTGAACTTTCATCTG+AGG | 0.591883 | 1.3:-70920091 | MS.gene006424:CDS |
GGTGGAACATTTATTCGGGA+AGG | 0.592387 | 1.3:-70919883 | MS.gene006424:CDS |
ACATCGAGTGATGTGAAAAG+AGG | 0.592896 | 1.3:+70920254 | None:intergenic |
GAAGGGCCAGAACCAATTGA+GGG | 0.595745 | 1.3:-70914708 | MS.gene006424:CDS |
CAACTGAGAGTAGACTAAAG+AGG | 0.595867 | 1.3:+70914823 | None:intergenic |
ACGATGAAGGTGCATAGGAA+AGG | 0.596875 | 1.3:-70918753 | MS.gene006424:CDS |
GATAGCAATCAAATTAAGAG+AGG | 0.597084 | 1.3:-70919652 | MS.gene006424:CDS |
CAACAGACAGAAATCAAGCA+CGG | 0.597880 | 1.3:-70919702 | MS.gene006424:CDS |
TAGTCTACTCTCAGTTGAGG+AGG | 0.598023 | 1.3:-70914817 | MS.gene006424:CDS |
ATAGCAATCAAATTAAGAGA+GGG | 0.602322 | 1.3:-70919651 | MS.gene006424:CDS |
AAAGGACGATGAAGGTGCAT+AGG | 0.604624 | 1.3:-70918758 | MS.gene006424:CDS |
CTTTAGTCTACTCTCAGTTG+AGG | 0.606003 | 1.3:-70914820 | MS.gene006424:CDS |
CTCGAATCTCAATTATTGAA+GGG | 0.606141 | 1.3:-70914725 | MS.gene006424:CDS |
TCTGACCACAATTTGAGGTG+AGG | 0.607327 | 1.3:+70917958 | None:intergenic |
TCCCCAAGTTGTAAATGTGA+AGG | 0.615749 | 1.3:-70917659 | MS.gene006424:CDS |
CATGCATGAGTTGAATCTGT+AGG | 0.615864 | 1.3:+70920036 | None:intergenic |
GGTGCGAAAATATACATGGT+AGG | 0.616427 | 1.3:-70917637 | MS.gene006424:CDS |
GTCACAGATGTAGTTGAAGG+TGG | 0.621901 | 1.3:-70919901 | MS.gene006424:CDS |
AGGAATGTGAACTGATGACT+TGG | 0.627401 | 1.3:+70918869 | None:intergenic |
ACTTTAGGAACAAATGCAGG+TGG | 0.632470 | 1.3:+70917998 | None:intergenic |
ACTGGTAGATTGTGGTAACA+GGG | 0.636581 | 1.3:+70919813 | None:intergenic |
TCTGTCACAGATGTAGTTGA+AGG | 0.639278 | 1.3:-70919904 | MS.gene006424:CDS |
AATTAAGAGAGGGGATGATG+AGG | 0.639810 | 1.3:-70919641 | MS.gene006424:intron |
AGATCTAACTAGGAAAGGAG+GGG | 0.643115 | 1.3:-70918523 | MS.gene006424:CDS |
GAAGGGTGCGAAAATATACA+TGG | 0.643125 | 1.3:-70917641 | MS.gene006424:CDS |
CTTGGCAAGCAAGAACCAGA+TGG | 0.652633 | 1.3:-70919946 | MS.gene006424:CDS |
AAGCAGTCTTGACATGAGCA+AGG | 0.654291 | 1.3:+70918082 | None:intergenic |
GGGCCAGAACCAATTGAGGG+TGG | 0.654960 | 1.3:-70914705 | MS.gene006424:CDS |
TAGCAATCAAATTAAGAGAG+GGG | 0.656836 | 1.3:-70919650 | MS.gene006424:CDS |
CCCCAAGTTGTAAATGTGAA+GGG | 0.657560 | 1.3:-70917658 | MS.gene006424:CDS |
TACACAAGATGACTCTATGG+AGG | 0.667611 | 1.3:-70914766 | MS.gene006424:CDS |
ACGAGTCCATATTCCTCACG+AGG | 0.713943 | 1.3:-70920220 | MS.gene006424:intron |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATATCAATATCATTAATAT+AGG | + | chr1.3:70917391-70917410 | None:intergenic | 10.0% |
!! | ATAATAATATGAATTACAAT+GGG | - | chr1.3:70917565-70917584 | MS.gene006424:intron | 10.0% |
!! | TAAAAACTAACATTTAATAA+TGG | + | chr1.3:70916686-70916705 | None:intergenic | 10.0% |
!! | TAACAACATAAAAAATAAAA+CGG | - | chr1.3:70918776-70918795 | MS.gene006424:CDS | 10.0% |
!! | TATAATAATATGAATTACAA+TGG | - | chr1.3:70917564-70917583 | MS.gene006424:intron | 10.0% |
!!! | CAAAAGAAATTTAATTTTAA+CGG | + | chr1.3:70918495-70918514 | None:intergenic | 10.0% |
!!! | TTAATGTGTTTATTTTTATA+AGG | + | chr1.3:70919537-70919556 | None:intergenic | 10.0% |
!! | AACAAAATAAGGTTAAAAAA+AGG | + | chr1.3:70917998-70918017 | None:intergenic | 15.0% |
!! | GCAATTATTATAACAAAATA+AGG | + | chr1.3:70918009-70918028 | None:intergenic | 15.0% |
!! | TTATAAAATTGAAACAAATC+TGG | + | chr1.3:70918813-70918832 | None:intergenic | 15.0% |
!!! | AAAAATAAAACGGATTTTTA+TGG | - | chr1.3:70918786-70918805 | MS.gene006424:CDS | 15.0% |
!!! | AAAATAAAACGGATTTTTAT+GGG | - | chr1.3:70918787-70918806 | MS.gene006424:CDS | 15.0% |
!!! | AATTTTCTGTATGTTTAATA+AGG | - | chr1.3:70918530-70918549 | MS.gene006424:CDS | 15.0% |
!!! | AGATTTGTTTCAATTTTATA+AGG | - | chr1.3:70918812-70918831 | MS.gene006424:CDS | 15.0% |
!!! | ATTTTTCATATTTTTATTGC+AGG | - | chr1.3:70914897-70914916 | MS.gene006424:CDS | 15.0% |
!!! | GATTTGTTTCAATTTTATAA+GGG | - | chr1.3:70918813-70918832 | MS.gene006424:CDS | 15.0% |
!!! | TGAAAGTAATTTTATATCTA+GGG | + | chr1.3:70916972-70916991 | None:intergenic | 15.0% |
!! | AAAAAGATACTTATTTGAGA+TGG | + | chr1.3:70918172-70918191 | None:intergenic | 20.0% |
!! | AAACATACAGAAAATTTGAA+TGG | + | chr1.3:70918526-70918545 | None:intergenic | 20.0% |
!! | AAACATAGAAACTAAGAAAA+TGG | + | chr1.3:70920091-70920110 | None:intergenic | 20.0% |
!! | AACATAGAAACTAAGAAAAT+GGG | + | chr1.3:70920090-70920109 | None:intergenic | 20.0% |
!! | AAGCAAAAAAAGTAAACAAA+AGG | + | chr1.3:70917127-70917146 | None:intergenic | 20.0% |
!! | AATAAAAACCAAGAAAATCA+AGG | + | chr1.3:70914777-70914796 | None:intergenic | 20.0% |
!! | ACATAAAAAGAAAATAGGAA+TGG | + | chr1.3:70919765-70919784 | None:intergenic | 20.0% |
!! | ATATAAAATTACTTTCACCA+AGG | - | chr1.3:70916975-70916994 | MS.gene006424:intron | 20.0% |
!! | ATGTTTCTTTCAAAATTCTT+TGG | - | chr1.3:70920021-70920040 | MS.gene006424:CDS | 20.0% |
!! | ATTAAAAATGTGATGTTGTA+GGG | + | chr1.3:70918886-70918905 | None:intergenic | 20.0% |
!! | CATACATAATATGTAAACAA+TGG | + | chr1.3:70917530-70917549 | None:intergenic | 20.0% |
!! | TATTAAAAATGTGATGTTGT+AGG | + | chr1.3:70918887-70918906 | None:intergenic | 20.0% |
!! | TGACAAACTAAATAAAATTG+CGG | + | chr1.3:70919387-70919406 | None:intergenic | 20.0% |
!!! | ATAAAACTTGTTCCTTTTTT+TGG | - | chr1.3:70916828-70916847 | MS.gene006424:intron | 20.0% |
!!! | ATTTAAGCTTTGACAATAAT+TGG | - | chr1.3:70917080-70917099 | MS.gene006424:intron | 20.0% |
!!! | CATTTTATAATTGCTATTAC+TGG | + | chr1.3:70915486-70915505 | None:intergenic | 20.0% |
!!! | GAAAGTAATTTTATATCTAG+GGG | + | chr1.3:70916971-70916990 | None:intergenic | 20.0% |
!!! | GTCACATTTTAATAATTTTG+AGG | + | chr1.3:70920181-70920200 | None:intergenic | 20.0% |
!!! | GTGAAAGTAATTTTATATCT+AGG | + | chr1.3:70916973-70916992 | None:intergenic | 20.0% |
!!! | TAAAACTTGTTCCTTTTTTT+GGG | - | chr1.3:70916829-70916848 | MS.gene006424:intron | 20.0% |
!!! | TAAATATTTCTGTAAGTCAA+GGG | - | chr1.3:70916319-70916338 | MS.gene006424:intron | 20.0% |
!!! | TGCTAAACTATTTTGATTTT+GGG | + | chr1.3:70918279-70918298 | None:intergenic | 20.0% |
!!! | TTAAATATTTCTGTAAGTCA+AGG | - | chr1.3:70916318-70916337 | MS.gene006424:intron | 20.0% |
!!! | TTCTTTTGTTACATTACAAT+AGG | - | chr1.3:70917936-70917955 | MS.gene006424:intron | 20.0% |
!!! | TTTAAGCTTTGACAATAATT+GGG | - | chr1.3:70917081-70917100 | MS.gene006424:intron | 20.0% |
!!! | TTTTACATTCTTTAGGTTTA+GGG | - | chr1.3:70920227-70920246 | MS.gene006424:CDS | 20.0% |
! | AAAAGAAAATAGGAATGGTT+AGG | + | chr1.3:70919760-70919779 | None:intergenic | 25.0% |
! | AAACAAAAATAATCTCTCCA+GGG | - | chr1.3:70919121-70919140 | MS.gene006424:intron | 25.0% |
! | AAACAAAAGGTTAATCTGAA+AGG | + | chr1.3:70917114-70917133 | None:intergenic | 25.0% |
! | AAAGAAAATAGGAATGGTTA+GGG | + | chr1.3:70919759-70919778 | None:intergenic | 25.0% |
! | AAGCAAAATATGACAAATCA+AGG | + | chr1.3:70919350-70919369 | None:intergenic | 25.0% |
! | AAGTATCTTCTTGAATTACT+TGG | - | chr1.3:70915314-70915333 | MS.gene006424:intron | 25.0% |
! | AAGTTATTGTAATCACAATC+TGG | + | chr1.3:70915422-70915441 | None:intergenic | 25.0% |
! | AGTTAGATCAAAACATGAAA+AGG | - | chr1.3:70916502-70916521 | MS.gene006424:intron | 25.0% |
! | ATAATATGAATTACAATGGG+TGG | - | chr1.3:70917568-70917587 | MS.gene006424:CDS | 25.0% |
! | ATAGAAAGAAAAACATTGCT+AGG | + | chr1.3:70919425-70919444 | None:intergenic | 25.0% |
! | ATAGCAATCAAATTAAGAGA+GGG | - | chr1.3:70915627-70915646 | MS.gene006424:intron | 25.0% |
! | ATGGAGATTAATCATATCTA+AGG | + | chr1.3:70914857-70914876 | None:intergenic | 25.0% |
! | CAAATTGATGCAAATAAAGA+TGG | + | chr1.3:70919788-70919807 | None:intergenic | 25.0% |
! | CATTATATTATCAGAGTTCA+AGG | - | chr1.3:70918921-70918940 | MS.gene006424:CDS | 25.0% |
! | CTTGAACTCTGATAATATAA+TGG | + | chr1.3:70918923-70918942 | None:intergenic | 25.0% |
! | GATATTGATATTCTTCTTGT+AGG | - | chr1.3:70917399-70917418 | MS.gene006424:intron | 25.0% |
! | GATGGACATAAAAAGAAAAT+AGG | + | chr1.3:70919770-70919789 | None:intergenic | 25.0% |
! | GTATATACCGAAAAAAACAA+AGG | - | chr1.3:70918062-70918081 | MS.gene006424:CDS | 25.0% |
! | GTTTACTGGAAAATCAAAAT+CGG | - | chr1.3:70918649-70918668 | MS.gene006424:intron | 25.0% |
! | TAAACAAAAATAATCTCTCC+AGG | - | chr1.3:70919120-70919139 | MS.gene006424:intron | 25.0% |
! | TAAATGCAATAAGAATACCA+TGG | + | chr1.3:70914876-70914895 | None:intergenic | 25.0% |
! | TAATAATATCCTCTAGTAAG+TGG | - | chr1.3:70919635-70919654 | MS.gene006424:intron | 25.0% |
! | TAGAAAGAAAAACATTGCTA+GGG | + | chr1.3:70919424-70919443 | None:intergenic | 25.0% |
! | TCCTTAAAGAAGTAATACTA+GGG | - | chr1.3:70918994-70919013 | MS.gene006424:intron | 25.0% |
! | TTAGATATGATTAATCTCCA+TGG | - | chr1.3:70914856-70914875 | MS.gene006424:CDS | 25.0% |
! | TTATATCGATATAACACCAT+GGG | + | chr1.3:70918230-70918249 | None:intergenic | 25.0% |
! | TTCACAACAATGTTGTTAAA+CGG | - | chr1.3:70919049-70919068 | MS.gene006424:intron | 25.0% |
! | TTGGATAAATTGAAGTTTAC+TGG | - | chr1.3:70918635-70918654 | MS.gene006424:intron | 25.0% |
! | TTTACTGGAAAATCAAAATC+GGG | - | chr1.3:70918650-70918669 | MS.gene006424:intron | 25.0% |
! | TTTATGTTGTTACGACAATT+CGG | + | chr1.3:70918768-70918787 | None:intergenic | 25.0% |
! | TTTCTTTCAGTATATGATTG+AGG | - | chr1.3:70917972-70917991 | MS.gene006424:CDS | 25.0% |
!! | ATAATTGAAGCTGTACATTT+TGG | + | chr1.3:70918039-70918058 | None:intergenic | 25.0% |
!! | GATTTAACTTCTGCAATAAT+AGG | - | chr1.3:70920297-70920316 | MS.gene006424:CDS | 25.0% |
!! | TAAACGTTGTGAATGTTTTA+AGG | - | chr1.3:70917498-70917517 | MS.gene006424:intron | 25.0% |
!! | TTAAACACCAAAAAGTATGT+TGG | - | chr1.3:70914958-70914977 | MS.gene006424:intron | 25.0% |
!! | TTACAGCTTTTACATTCTTT+AGG | - | chr1.3:70920220-70920239 | MS.gene006424:intron | 25.0% |
!! | TTTTATGCTTGAAAATATGC+AGG | - | chr1.3:70920410-70920429 | MS.gene006424:intron | 25.0% |
!!! | ACATACTTTTTGGTGTTTAA+AGG | + | chr1.3:70914958-70914977 | None:intergenic | 25.0% |
!!! | ATCAAAGCCTTTGTTTTTTT+CGG | + | chr1.3:70918072-70918091 | None:intergenic | 25.0% |
!!! | CTGTATTTTTTATGTCCATT+CGG | - | chr1.3:70915790-70915809 | MS.gene006424:intron | 25.0% |
!!! | CTTTTACATTCTTTAGGTTT+AGG | - | chr1.3:70920226-70920245 | MS.gene006424:CDS | 25.0% |
!!! | GTGCTAAACTATTTTGATTT+TGG | + | chr1.3:70918280-70918299 | None:intergenic | 25.0% |
!!! | GTTTTAATCCAGATTTAGAT+GGG | - | chr1.3:70920138-70920157 | MS.gene006424:intron | 25.0% |
!!! | TAGTATCAACGTTTTTTCTT+GGG | - | chr1.3:70919661-70919680 | MS.gene006424:CDS | 25.0% |
!!! | TCAGTTTAACCTGTTATTTT+AGG | - | chr1.3:70915917-70915936 | MS.gene006424:intron | 25.0% |
!!! | TGTTTTAATCCAGATTTAGA+TGG | - | chr1.3:70920137-70920156 | MS.gene006424:intron | 25.0% |
!!! | TTTAACCTGTTATTTTAGGT+GGG | - | chr1.3:70915921-70915940 | MS.gene006424:intron | 25.0% |
!!! | TTTTGATTCGACATTTTTCA+GGG | - | chr1.3:70918720-70918739 | MS.gene006424:CDS | 25.0% |
!!! | TTTTGTTTCTTCACAGTTTA+AGG | - | chr1.3:70920275-70920294 | MS.gene006424:CDS | 25.0% |
AAACCAGCTTACTAAAATGA+AGG | + | chr1.3:70916897-70916916 | None:intergenic | 30.0% | |
AAACTAAATAAAATTGCGGC+GGG | + | chr1.3:70919383-70919402 | None:intergenic | 30.0% | |
AACAGGTTAAACTGATATGT+TGG | + | chr1.3:70915912-70915931 | None:intergenic | 30.0% | |
AAGAAAATAGGAATGGTTAG+GGG | + | chr1.3:70919758-70919777 | None:intergenic | 30.0% | |
AAGTACAGTCTATACAAAGT+AGG | - | chr1.3:70915867-70915886 | MS.gene006424:intron | 30.0% | |
AATCAAAAGTCTCCAAAAAC+AGG | + | chr1.3:70918708-70918727 | None:intergenic | 30.0% | |
AGTACAGTCTATACAAAGTA+GGG | - | chr1.3:70915868-70915887 | MS.gene006424:intron | 30.0% | |
ATATCTTAAAATAAGCCCCA+TGG | - | chr1.3:70918211-70918230 | MS.gene006424:intron | 30.0% | |
ATGAAAAGATGTCTTCTCAA+AGG | - | chr1.3:70916265-70916284 | MS.gene006424:intron | 30.0% | |
ATTACTATAGACTGTTGGAT+TGG | + | chr1.3:70919157-70919176 | None:intergenic | 30.0% | |
ATTGCCATTCTTATTCATTG+CGG | + | chr1.3:70918417-70918436 | None:intergenic | 30.0% | |
ATTTAAGCACGAGATCTTTA+CGG | + | chr1.3:70917788-70917807 | None:intergenic | 30.0% | |
CAAACTAAATAAAATTGCGG+CGG | + | chr1.3:70919384-70919403 | None:intergenic | 30.0% | |
CATTTCAGATTGGAATTCTT+AGG | + | chr1.3:70918959-70918978 | None:intergenic | 30.0% | |
CCAATTGATGAATAACGTAA+TGG | + | chr1.3:70917761-70917780 | None:intergenic | 30.0% | |
CCATTACGTTATTCATCAAT+TGG | - | chr1.3:70917758-70917777 | MS.gene006424:intron | 30.0% | |
CGAATGGACATAAAAAATAC+AGG | + | chr1.3:70915792-70915811 | None:intergenic | 30.0% | |
CTAAGAATTCCAATCTGAAA+TGG | - | chr1.3:70918957-70918976 | MS.gene006424:intron | 30.0% | |
CTATGAACAAATGAAGTTGA+CGG | + | chr1.3:70919277-70919296 | None:intergenic | 30.0% | |
CTCCTTAAAGAAGTAATACT+AGG | - | chr1.3:70918993-70919012 | MS.gene006424:intron | 30.0% | |
CTCGAATCTCAATTATTGAA+GGG | - | chr1.3:70920553-70920572 | MS.gene006424:intron | 30.0% | |
CTGTACTTTCAAAGTAACAA+TGG | + | chr1.3:70915855-70915874 | None:intergenic | 30.0% | |
GAATAAAGATTATCAAGCAG+AGG | + | chr1.3:70916664-70916683 | None:intergenic | 30.0% | |
GATAACATAACAAACTCTTC+TGG | + | chr1.3:70919462-70919481 | None:intergenic | 30.0% | |
GATAGCAATCAAATTAAGAG+AGG | - | chr1.3:70915626-70915645 | MS.gene006424:intron | 30.0% | |
GTTATATCGATATAACACCA+TGG | + | chr1.3:70918231-70918250 | None:intergenic | 30.0% | |
TACTCTATTATGACATGCAA+TGG | + | chr1.3:70916026-70916045 | None:intergenic | 30.0% | |
TAGCAATCAAATTAAGAGAG+GGG | - | chr1.3:70915628-70915647 | MS.gene006424:intron | 30.0% | |
TAGTTACATGTACTCACTTA+GGG | - | chr1.3:70918127-70918146 | MS.gene006424:intron | 30.0% | |
TATATCGATATAACACCATG+GGG | + | chr1.3:70918229-70918248 | None:intergenic | 30.0% | |
TATGCCTTCGTAATGATTTA+AGG | + | chr1.3:70916241-70916260 | None:intergenic | 30.0% | |
TCACTTTCTCTTCAAAATTG+AGG | + | chr1.3:70919587-70919606 | None:intergenic | 30.0% | |
TCCCTAGTATTACTTCTTTA+AGG | + | chr1.3:70918998-70919017 | None:intergenic | 30.0% | |
TCTCTCTATTATTCATTGCT+AGG | - | chr1.3:70915144-70915163 | MS.gene006424:intron | 30.0% | |
TGAAATTGAAGACAATCCTT+TGG | - | chr1.3:70915541-70915560 | MS.gene006424:intron | 30.0% | |
TTACAATAGGAGCTATGTTT+AGG | - | chr1.3:70917949-70917968 | MS.gene006424:intron | 30.0% | |
TTAGTTACATGTACTCACTT+AGG | - | chr1.3:70918126-70918145 | MS.gene006424:intron | 30.0% | |
TTATGTTGTTACGACAATTC+GGG | + | chr1.3:70918767-70918786 | None:intergenic | 30.0% | |
TTCTGATTACTATAGACTGT+TGG | + | chr1.3:70919162-70919181 | None:intergenic | 30.0% | |
TTGAAGGTGGAACATTTATT+CGG | - | chr1.3:70915390-70915409 | MS.gene006424:intron | 30.0% | |
TTGTGAAAGTGACTTAAGAT+TGG | - | chr1.3:70918616-70918635 | MS.gene006424:intron | 30.0% | |
TTTAAAGAATAAGTGCAGCT+CGG | + | chr1.3:70916303-70916322 | None:intergenic | 30.0% | |
TTTATATCTAGGGGATGTAA+AGG | + | chr1.3:70916962-70916981 | None:intergenic | 30.0% | |
! | AGAGAAATTCTAGAGAAAGA+AGG | + | chr1.3:70920621-70920640 | None:intergenic | 30.0% |
! | AGATACTTATTTGAGATGGA+AGG | + | chr1.3:70918168-70918187 | None:intergenic | 30.0% |
! | GTTTCTTGAAGTTTTCTCTT+TGG | - | chr1.3:70920064-70920083 | MS.gene006424:CDS | 30.0% |
! | TCTATCAACCTTGATTTTCT+TGG | - | chr1.3:70914766-70914785 | MS.gene006424:CDS | 30.0% |
! | TTTGGTTTCACTATCGAATT+GGG | - | chr1.3:70920039-70920058 | MS.gene006424:CDS | 30.0% |
!! | AAGAAAATCAAGGTTGATAG+AGG | + | chr1.3:70914767-70914786 | None:intergenic | 30.0% |
!! | CTTTTGATTCGACATTTTTC+AGG | - | chr1.3:70918719-70918738 | MS.gene006424:CDS | 30.0% |
!! | TTAAAGGAGATAGAGTATTG+AGG | + | chr1.3:70914942-70914961 | None:intergenic | 30.0% |
!! | TTACCTTCATTTTAGTAAGC+TGG | - | chr1.3:70916891-70916910 | MS.gene006424:intron | 30.0% |
!! | TTTATTCTAGTTCCAGGAAA+AGG | - | chr1.3:70919561-70919580 | MS.gene006424:intron | 30.0% |
!!! | AAGTCTTTTATTCTAGTTCC+AGG | - | chr1.3:70919555-70919574 | MS.gene006424:intron | 30.0% |
!!! | AATGGTCTTTTTGTTTTCTG+TGG | - | chr1.3:70920252-70920271 | MS.gene006424:CDS | 30.0% |
!!! | GATCTCGTGCTTAAATTTTT+TGG | - | chr1.3:70917792-70917811 | MS.gene006424:CDS | 30.0% |
!!! | GTAGTATCAACGTTTTTTCT+TGG | - | chr1.3:70919660-70919679 | MS.gene006424:CDS | 30.0% |
!!! | GTTTAACCTGTTATTTTAGG+TGG | - | chr1.3:70915920-70915939 | MS.gene006424:intron | 30.0% |
!!! | TGCTTCTTTTTCAGTAATTG+TGG | - | chr1.3:70917142-70917161 | MS.gene006424:intron | 30.0% |
!!! | TTAACCTGTTATTTTAGGTG+GGG | - | chr1.3:70915922-70915941 | MS.gene006424:intron | 30.0% |
AAACATGAAAAGGACGATGA+AGG | - | chr1.3:70916512-70916531 | MS.gene006424:intron | 35.0% | |
AAATCCTGAACTTTCATCTG+AGG | - | chr1.3:70915187-70915206 | MS.gene006424:intron | 35.0% | |
AAATGCAGCATTGTGATACA+AGG | + | chr1.3:70914711-70914730 | None:intergenic | 35.0% | |
AAGTCAGATCTAACTAGGAA+AGG | - | chr1.3:70916750-70916769 | MS.gene006424:intron | 35.0% | |
AATGGCAATGTGTACATTTC+GGG | - | chr1.3:70918428-70918447 | MS.gene006424:intron | 35.0% | |
ACATATCCAGATCACAAAAG+CGG | + | chr1.3:70919949-70919968 | None:intergenic | 35.0% | |
ACCAAAGACAGATAGATATG+AGG | + | chr1.3:70919234-70919253 | None:intergenic | 35.0% | |
ACCCTTCACATTTACAACTT+GGG | + | chr1.3:70917624-70917643 | None:intergenic | 35.0% | |
ACTTGTTTAGCATTACACCT+CGG | - | chr1.3:70918565-70918584 | MS.gene006424:intron | 35.0% | |
ATATCTATCTGTCTTTGGTC+TGG | - | chr1.3:70919235-70919254 | MS.gene006424:intron | 35.0% | |
ATGAAATGCAGCAAAGTGAA+AGG | + | chr1.3:70919840-70919859 | None:intergenic | 35.0% | |
CAGTAACTCAAACTTGTGAA+TGG | + | chr1.3:70915826-70915845 | None:intergenic | 35.0% | |
CATCAAAACCCATCTAAATC+TGG | + | chr1.3:70920149-70920168 | None:intergenic | 35.0% | |
CCAGAATTCTTTCGAACTTT+AGG | + | chr1.3:70917298-70917317 | None:intergenic | 35.0% | |
CCTAAAGTTCGAAAGAATTC+TGG | - | chr1.3:70917295-70917314 | MS.gene006424:intron | 35.0% | |
CCTCGAATCTCAATTATTGA+AGG | - | chr1.3:70920552-70920571 | MS.gene006424:intron | 35.0% | |
CCTTCAATAATTGAGATTCG+AGG | + | chr1.3:70920555-70920574 | None:intergenic | 35.0% | |
CGAAAATATACATGGTAGGA+AGG | - | chr1.3:70917645-70917664 | MS.gene006424:CDS | 35.0% | |
CTATACACAAGATGACTCTA+TGG | - | chr1.3:70920509-70920528 | MS.gene006424:intron | 35.0% | |
CTCCAAAAACAGGCAAAATT+CGG | + | chr1.3:70918698-70918717 | None:intergenic | 35.0% | |
CTGTTGCAATAAGAATACCA+TGG | + | chr1.3:70920347-70920366 | None:intergenic | 35.0% | |
CTTGTGGAATCAAATGCTAT+CGG | - | chr1.3:70917832-70917851 | MS.gene006424:CDS | 35.0% | |
GAAACAAACCACTTCTAACT+TGG | + | chr1.3:70919728-70919747 | None:intergenic | 35.0% | |
GAATGGCAATGTGTACATTT+CGG | - | chr1.3:70918427-70918446 | MS.gene006424:intron | 35.0% | |
GAATGGTTTGAGTAAAGGAA+AGG | - | chr1.3:70919083-70919102 | MS.gene006424:CDS | 35.0% | |
GCTATCCATTAAAGCAACAT+TGG | + | chr1.3:70915612-70915631 | None:intergenic | 35.0% | |
GTACAGTCTATACAAAGTAG+GGG | - | chr1.3:70915869-70915888 | MS.gene006424:intron | 35.0% | |
GTCACTATTGAAGAATTGCT+TGG | - | chr1.3:70920486-70920505 | MS.gene006424:intron | 35.0% | |
GTTTGAGTAAAGGAAAGGAA+GGG | - | chr1.3:70919088-70919107 | MS.gene006424:CDS | 35.0% | |
TAACGACTCTTTCTGTGAAA+CGG | + | chr1.3:70915988-70916007 | None:intergenic | 35.0% | |
TAATATCCTCTAGTAAGTGG+TGG | - | chr1.3:70919638-70919657 | MS.gene006424:intron | 35.0% | |
TAGTTTCTGACCACAATTTG+AGG | + | chr1.3:70917328-70917347 | None:intergenic | 35.0% | |
TCCAAAAACAGGCAAAATTC+GGG | + | chr1.3:70918697-70918716 | None:intergenic | 35.0% | |
TGAAGGTGGAACATTTATTC+GGG | - | chr1.3:70915391-70915410 | MS.gene006424:intron | 35.0% | |
TTCAGAACATGTAAAGGAAG+AGG | - | chr1.3:70916572-70916591 | MS.gene006424:intron | 35.0% | |
TTGCCATTCTTATTCATTGC+GGG | + | chr1.3:70918416-70918435 | None:intergenic | 35.0% | |
TTGCGTATTAAATTCAACCG+AGG | + | chr1.3:70918585-70918604 | None:intergenic | 35.0% | |
TTGTGCTATCACCCAAAAAA+AGG | + | chr1.3:70916843-70916862 | None:intergenic | 35.0% | |
TTTCACTTTGCTGCATTTCA+TGG | - | chr1.3:70919839-70919858 | MS.gene006424:CDS | 35.0% | |
! | AATGGGTGGTTTTCTTTTGA+AGG | - | chr1.3:70917582-70917601 | MS.gene006424:CDS | 35.0% |
! | ACCAAAAAGTATGTTGGAGT+TGG | - | chr1.3:70914964-70914983 | MS.gene006424:intron | 35.0% |
! | ACGAGGTACTTGTAAAATCT+TGG | - | chr1.3:70915075-70915094 | MS.gene006424:intron | 35.0% |
! | AGAATTCCAATCTGAAATGG+TGG | - | chr1.3:70918960-70918979 | MS.gene006424:intron | 35.0% |
! | ATGGGTGGTTTTCTTTTGAA+GGG | - | chr1.3:70917583-70917602 | MS.gene006424:CDS | 35.0% |
! | CTTTGGTTTCACTATCGAAT+TGG | - | chr1.3:70920038-70920057 | MS.gene006424:CDS | 35.0% |
! | GAAGAGAAAGTGAAGTGTTA+GGG | - | chr1.3:70919594-70919613 | MS.gene006424:intron | 35.0% |
! | GAATAACGTAATGGAAGCAA+TGG | + | chr1.3:70917752-70917771 | None:intergenic | 35.0% |
! | TCCAACTCCAACATACTTTT+TGG | + | chr1.3:70914968-70914987 | None:intergenic | 35.0% |
! | TCGATTGATCTAGTTTCTTC+TGG | - | chr1.3:70916549-70916568 | MS.gene006424:intron | 35.0% |
! | TGAAGAGAAAGTGAAGTGTT+AGG | - | chr1.3:70919593-70919612 | MS.gene006424:intron | 35.0% |
! | TTCTTTAGGTTTAGGGTCAA+TGG | - | chr1.3:70920234-70920253 | MS.gene006424:CDS | 35.0% |
! | TTGCTATTACTGGTAGATTG+TGG | + | chr1.3:70915476-70915495 | None:intergenic | 35.0% |
!! | AATGGATTAAACGATCCGAA+TGG | + | chr1.3:70915808-70915827 | None:intergenic | 35.0% |
!! | TCTTGCCAATGTTGCTTTAA+TGG | - | chr1.3:70915604-70915623 | MS.gene006424:intron | 35.0% |
!! | TTCTGGTTCAGAACATGTAA+AGG | - | chr1.3:70916566-70916585 | MS.gene006424:intron | 35.0% |
!! | TTTTAGAGACAGCAAAACCT+GGG | - | chr1.3:70918840-70918859 | MS.gene006424:CDS | 35.0% |
AACGACTCTTTCTGTGAAAC+GGG | + | chr1.3:70915987-70916006 | None:intergenic | 40.0% | |
AAGACAGATAGATATGAGGC+TGG | + | chr1.3:70919230-70919249 | None:intergenic | 40.0% | |
AAGTCATCAGTTCACATTCC+TGG | - | chr1.3:70916411-70916430 | MS.gene006424:intron | 40.0% | |
AATTAAGAGAGGGGATGATG+AGG | - | chr1.3:70915637-70915656 | MS.gene006424:intron | 40.0% | |
ACAGTAGCATCACACTTGTT+TGG | - | chr1.3:70918386-70918405 | MS.gene006424:intron | 40.0% | |
ACATCGAGTGATGTGAAAAG+AGG | + | chr1.3:70915027-70915046 | None:intergenic | 40.0% | |
ACCACTTCTAACTTGGAAAC+AGG | + | chr1.3:70919721-70919740 | None:intergenic | 40.0% | |
ACCTGGGACTTGTAAAGATT+AGG | - | chr1.3:70918856-70918875 | MS.gene006424:CDS | 40.0% | |
ACTGGTAGATTGTGGTAACA+GGG | + | chr1.3:70915468-70915487 | None:intergenic | 40.0% | |
AGACCCGCAATGAATAAGAA+TGG | - | chr1.3:70918410-70918429 | MS.gene006424:intron | 40.0% | |
AGATCTAACTAGGAAAGGAG+GGG | - | chr1.3:70916755-70916774 | MS.gene006424:intron | 40.0% | |
AGGAACTCGACATTAGAATG+AGG | - | chr1.3:70917901-70917920 | MS.gene006424:intron | 40.0% | |
AGGAATGTGAACTGATGACT+TGG | + | chr1.3:70916412-70916431 | None:intergenic | 40.0% | |
AGTATACAGATGAGCTGTCA+AGG | - | chr1.3:70916181-70916200 | MS.gene006424:intron | 40.0% | |
ATACTACCACCACTTACTAG+AGG | + | chr1.3:70919647-70919666 | None:intergenic | 40.0% | |
ATATCTGTTCCACCCTCAAT+TGG | + | chr1.3:70920585-70920604 | None:intergenic | 40.0% | |
ATTTGATTCCACAAGCTCGT+TGG | + | chr1.3:70917827-70917846 | None:intergenic | 40.0% | |
CAACAGACAGAAATCAAGCA+CGG | - | chr1.3:70915576-70915595 | MS.gene006424:intron | 40.0% | |
CAACTGAGAGTAGACTAAAG+AGG | + | chr1.3:70920458-70920477 | None:intergenic | 40.0% | |
CACCAATGGAGACACATTTA+CGG | - | chr1.3:70916364-70916383 | MS.gene006424:intron | 40.0% | |
CACCCTTCACATTTACAACT+TGG | + | chr1.3:70917625-70917644 | None:intergenic | 40.0% | |
CAGATCTAACTAGGAAAGGA+GGG | - | chr1.3:70916754-70916773 | MS.gene006424:intron | 40.0% | |
CCAGCCTTAAATCATTACGA+AGG | - | chr1.3:70916234-70916253 | MS.gene006424:intron | 40.0% | |
CCCCAAGTTGTAAATGTGAA+GGG | - | chr1.3:70917620-70917639 | MS.gene006424:CDS | 40.0% | |
CCCTTCACATTTACAACTTG+GGG | + | chr1.3:70917623-70917642 | None:intergenic | 40.0% | |
CTACAGATTCAACTCATGCA+TGG | - | chr1.3:70915243-70915262 | MS.gene006424:intron | 40.0% | |
CTATCACCACCATTTCAGAT+TGG | + | chr1.3:70918969-70918988 | None:intergenic | 40.0% | |
CTTTAGTCTACTCTCAGTTG+AGG | - | chr1.3:70920458-70920477 | MS.gene006424:intron | 40.0% | |
GAAAGGAAAATGCTGCAGAA+AGG | + | chr1.3:70919823-70919842 | None:intergenic | 40.0% | |
GAATATGGACTCGTCGTTAA+AGG | + | chr1.3:70915052-70915071 | None:intergenic | 40.0% | |
GACGAGTGAAGTGCAATTTA+AGG | - | chr1.3:70916464-70916483 | MS.gene006424:intron | 40.0% | |
GCATCATCACTTGAGATTTG+AGG | + | chr1.3:70915293-70915312 | None:intergenic | 40.0% | |
GCCTCATATCTATCTGTCTT+TGG | - | chr1.3:70919230-70919249 | MS.gene006424:intron | 40.0% | |
GGAAAAAACCTCTTGTGAGT+TGG | + | chr1.3:70914690-70914709 | None:intergenic | 40.0% | |
GGAACAAGTCAGATCTAACT+AGG | - | chr1.3:70916745-70916764 | MS.gene006424:intron | 40.0% | |
GGTGCGAAAATATACATGGT+AGG | - | chr1.3:70917641-70917660 | MS.gene006424:CDS | 40.0% | |
GGTTTGAGTAAAGGAAAGGA+AGG | - | chr1.3:70919087-70919106 | MS.gene006424:CDS | 40.0% | |
TACACAAGATGACTCTATGG+AGG | - | chr1.3:70920512-70920531 | MS.gene006424:intron | 40.0% | |
TACTGGTAGATTGTGGTAAC+AGG | + | chr1.3:70915469-70915488 | None:intergenic | 40.0% | |
TCAGATCTAACTAGGAAAGG+AGG | - | chr1.3:70916753-70916772 | MS.gene006424:intron | 40.0% | |
TCCCCAAGTTGTAAATGTGA+AGG | - | chr1.3:70917619-70917638 | MS.gene006424:CDS | 40.0% | |
TCCTAATCTTTACAAGTCCC+AGG | + | chr1.3:70918860-70918879 | None:intergenic | 40.0% | |
TCCTGTTTCCAAGTTAGAAG+TGG | - | chr1.3:70919717-70919736 | MS.gene006424:CDS | 40.0% | |
TCTGTCACAGATGTAGTTGA+AGG | - | chr1.3:70915374-70915393 | MS.gene006424:intron | 40.0% | |
TGAGGGTGGAACAGATATTT+GGG | - | chr1.3:70920587-70920606 | MS.gene006424:intron | 40.0% | |
TGCTTGATTTCTGTCTGTTG+CGG | + | chr1.3:70915576-70915595 | None:intergenic | 40.0% | |
TTCACCCCACCTAAAATAAC+AGG | + | chr1.3:70915929-70915948 | None:intergenic | 40.0% | |
TTGAGGGTGGAACAGATATT+TGG | - | chr1.3:70920586-70920605 | MS.gene006424:intron | 40.0% | |
! | ACACTTTCCTCTTCCTTTTG+CGG | + | chr1.3:70916623-70916642 | None:intergenic | 40.0% |
! | ACTTTAGGAACAAATGCAGG+TGG | + | chr1.3:70917283-70917302 | None:intergenic | 40.0% |
! | CATGCATGAGTTGAATCTGT+AGG | + | chr1.3:70915245-70915264 | None:intergenic | 40.0% |
! | CCTTCGTAATGATTTAAGGC+TGG | + | chr1.3:70916237-70916256 | None:intergenic | 40.0% |
! | CGAACTTTAGGAACAAATGC+AGG | + | chr1.3:70917286-70917305 | None:intergenic | 40.0% |
! | CTCTTGTGAGTTGGAAACAA+GGG | + | chr1.3:70914681-70914700 | None:intergenic | 40.0% |
! | GAAGGGTGCGAAAATATACA+TGG | - | chr1.3:70917637-70917656 | MS.gene006424:CDS | 40.0% |
! | GATTTTACAAGTACCTCGTG+AGG | + | chr1.3:70915074-70915093 | None:intergenic | 40.0% |
! | TCAAAATTGAGGCCTTTTCC+TGG | + | chr1.3:70919576-70919595 | None:intergenic | 40.0% |
!! | ATTTTAGGTGGGGTGAATTG+AGG | - | chr1.3:70915932-70915951 | MS.gene006424:intron | 40.0% |
!! | CAAAGTCGAACTTTGGTGTT+AGG | + | chr1.3:70916723-70916742 | None:intergenic | 40.0% |
!! | CTTTTAGAGACAGCAAAACC+TGG | - | chr1.3:70918839-70918858 | MS.gene006424:CDS | 40.0% |
!! | GGTTGATAGAGGAAAGAGAA+AGG | + | chr1.3:70914756-70914775 | None:intergenic | 40.0% |
!! | GTTTTGAGCCAAAAGCAAGT+GGG | + | chr1.3:70915520-70915539 | None:intergenic | 40.0% |
!! | TGTTTTGAGCCAAAAGCAAG+TGG | + | chr1.3:70915521-70915540 | None:intergenic | 40.0% |
!! | TTTGAAGCTGGAGCTTTGTT+GGG | + | chr1.3:70917430-70917449 | None:intergenic | 40.0% |
!!! | ACGTTTTTTCTTGGGCACTA+TGG | - | chr1.3:70919669-70919688 | MS.gene006424:CDS | 40.0% |
AAATCAAAATCGGGCCCGAA+TGG | - | chr1.3:70918659-70918678 | MS.gene006424:intron | 45.0% | |
AAGCAGTCTTGACATGAGCA+AGG | + | chr1.3:70917199-70917218 | None:intergenic | 45.0% | |
ACACCAAAGTTCGACTTTGC+AGG | - | chr1.3:70916724-70916743 | MS.gene006424:intron | 45.0% | |
ACAGCCTCAGATGAAAGTTC+AGG | + | chr1.3:70915194-70915213 | None:intergenic | 45.0% | |
ACTATGACGCTGAACTCACT+TGG | - | chr1.3:70914991-70915010 | MS.gene006424:intron | 45.0% | |
AGCCGTAAATGTGTCTCCAT+TGG | + | chr1.3:70916369-70916388 | None:intergenic | 45.0% | |
AGGGCTCGAATGGTCAAAAT+CGG | - | chr1.3:70918739-70918758 | MS.gene006424:CDS | 45.0% | |
ATCCAAAACCAACGAGCTTG+TGG | - | chr1.3:70917816-70917835 | MS.gene006424:CDS | 45.0% | |
ATCTCAAGTCTCTGCACCAA+TGG | - | chr1.3:70916350-70916369 | MS.gene006424:intron | 45.0% | |
ATGTTGTTAAACGGAAGCCG+CGG | - | chr1.3:70919058-70919077 | MS.gene006424:intron | 45.0% | |
ATTAGACTCGAGTAGAGCCT+TGG | + | chr1.3:70916995-70917014 | None:intergenic | 45.0% | |
CAAGCAAGAACCAGATGGTA+CGG | - | chr1.3:70915337-70915356 | MS.gene006424:intron | 45.0% | |
CAAGTACCTCGTGAGGAATA+TGG | + | chr1.3:70915067-70915086 | None:intergenic | 45.0% | |
CAGTCTATACAAAGTAGGGG+TGG | - | chr1.3:70915872-70915891 | MS.gene006424:intron | 45.0% | |
CCATGGAGACTAATCACATC+AGG | + | chr1.3:70920330-70920349 | None:intergenic | 45.0% | |
GGTGGAACATTTATTCGGGA+AGG | - | chr1.3:70915395-70915414 | MS.gene006424:intron | 45.0% | |
GTCACAGATGTAGTTGAAGG+TGG | - | chr1.3:70915377-70915396 | MS.gene006424:intron | 45.0% | |
GTTCCTGCAAAGTCGAACTT+TGG | + | chr1.3:70916730-70916749 | None:intergenic | 45.0% | |
TAGTCTACTCTCAGTTGAGG+AGG | - | chr1.3:70920461-70920480 | MS.gene006424:intron | 45.0% | |
TCTTGTACATCCGTACCATC+TGG | + | chr1.3:70915350-70915369 | None:intergenic | 45.0% | |
TGGTTCCTCACCTCAAATTG+TGG | - | chr1.3:70917315-70917334 | MS.gene006424:intron | 45.0% | |
TTCCATGCAAACACACGACA+TGG | + | chr1.3:70920381-70920400 | None:intergenic | 45.0% | |
TTCCATGTCGTGTGTTTGCA+TGG | - | chr1.3:70920376-70920395 | MS.gene006424:intron | 45.0% | |
TTGGATCCTACCACTCAAGT+TGG | - | chr1.3:70915957-70915976 | MS.gene006424:intron | 45.0% | |
TTTCTGTCTGTTGCGGCTAT+TGG | + | chr1.3:70915569-70915588 | None:intergenic | 45.0% | |
TTTCTTGGGCACTATGGAGA+TGG | - | chr1.3:70919675-70919694 | MS.gene006424:CDS | 45.0% | |
! | AAAGGACGATGAAGGTGCAT+AGG | - | chr1.3:70916520-70916539 | MS.gene006424:intron | 45.0% |
! | ACAAATGAAGTTGACGGACG+TGG | + | chr1.3:70919271-70919290 | None:intergenic | 45.0% |
! | ACGATGAAGGTGCATAGGAA+AGG | - | chr1.3:70916525-70916544 | MS.gene006424:intron | 45.0% |
! | ACTGTTGACCCACTTGCTTT+TGG | - | chr1.3:70915509-70915528 | MS.gene006424:intron | 45.0% |
! | AGAGTATCCGCAAAAGGAAG+AGG | - | chr1.3:70916613-70916632 | MS.gene006424:intron | 45.0% |
! | CAAATGAAGTTGACGGACGT+GGG | + | chr1.3:70919270-70919289 | None:intergenic | 45.0% |
! | CCTCTTGTGAGTTGGAAACA+AGG | + | chr1.3:70914682-70914701 | None:intergenic | 45.0% |
! | CCTTGTTTCCAACTCACAAG+AGG | - | chr1.3:70914679-70914698 | MS.gene006424:CDS | 45.0% |
! | GCCCGAATTTTGCCTGTTTT+TGG | - | chr1.3:70918693-70918712 | MS.gene006424:CDS | 45.0% |
! | TCTGACCACAATTTGAGGTG+AGG | + | chr1.3:70917323-70917342 | None:intergenic | 45.0% |
! | TCTGTCAGAGTATCCGCAAA+AGG | - | chr1.3:70916607-70916626 | MS.gene006424:intron | 45.0% |
! | TGCACTTCACTCGTCCTTTT+GGG | + | chr1.3:70916459-70916478 | None:intergenic | 45.0% |
! | TTAAGGCTGGAAGTGCATAC+TGG | + | chr1.3:70916224-70916243 | None:intergenic | 45.0% |
! | TTGCACTTCACTCGTCCTTT+TGG | + | chr1.3:70916460-70916479 | None:intergenic | 45.0% |
!! | CCTGATGTGATTAGTCTCCA+TGG | - | chr1.3:70920327-70920346 | MS.gene006424:CDS | 45.0% |
!! | CTTTGAAGCTGGAGCTTTGT+TGG | + | chr1.3:70917431-70917450 | None:intergenic | 45.0% |
!! | GAAACAGGAGTGTTCTTCTC+TGG | + | chr1.3:70919706-70919725 | None:intergenic | 45.0% |
!! | GATGATCCGCTTTTGTGATC+TGG | - | chr1.3:70919940-70919959 | MS.gene006424:CDS | 45.0% |
!! | GGTGGTTTTCTTTTGAAGGG+TGG | - | chr1.3:70917586-70917605 | MS.gene006424:CDS | 45.0% |
!! | TTGAAGCTGGAGCTTTGTTG+GGG | + | chr1.3:70917429-70917448 | None:intergenic | 45.0% |
!!! | GACATTTTTCAGGGCTCGAA+TGG | - | chr1.3:70918729-70918748 | MS.gene006424:CDS | 45.0% |
!!! | TCCTTTTGGGAGTACTCTGA+CGG | + | chr1.3:70916446-70916465 | None:intergenic | 45.0% |
!!! | TTCCACAAGCTCGTTGGTTT+TGG | + | chr1.3:70917821-70917840 | None:intergenic | 45.0% |
!!! | TTATTTTATTTTTTTACTTT+TGG | - | chr1.3:70917358-70917377 | MS.gene006424:intron | 5.0% |
AACGGGTGAACCAACTTGAG+TGG | + | chr1.3:70915970-70915989 | None:intergenic | 50.0% | |
ACGAGTCCATATTCCTCACG+AGG | - | chr1.3:70915058-70915077 | MS.gene006424:intron | 50.0% | |
ATACAGTTCTGCAAGCTCGC+AGG | - | chr1.3:70917239-70917258 | MS.gene006424:intron | 50.0% | |
CGGCGGAATGGTTTGAGTAA+AGG | - | chr1.3:70919078-70919097 | MS.gene006424:CDS | 50.0% | |
CTCTATGGAGGATTCGTCTC+AGG | - | chr1.3:70920524-70920543 | MS.gene006424:intron | 50.0% | |
CTCTGACGGAAATCTTCACC+AGG | + | chr1.3:70916432-70916451 | None:intergenic | 50.0% | |
CTTGGCAAGCAAGAACCAGA+TGG | - | chr1.3:70915332-70915351 | MS.gene006424:intron | 50.0% | |
GAAGGGCCAGAACCAATTGA+GGG | - | chr1.3:70920570-70920589 | MS.gene006424:intron | 50.0% | |
GCAGAATACGATGCAAGTGC+AGG | - | chr1.3:70917458-70917477 | MS.gene006424:intron | 50.0% | |
GGATTGGATTCTACAAGCCC+TGG | + | chr1.3:70919141-70919160 | None:intergenic | 50.0% | |
GGTGAACCAACTTGAGTGGT+AGG | + | chr1.3:70915966-70915985 | None:intergenic | 50.0% | |
TGAAGGGCCAGAACCAATTG+AGG | - | chr1.3:70920569-70920588 | MS.gene006424:intron | 50.0% | |
TGAGTATCTCCTACTCGCAG+TGG | - | chr1.3:70917874-70917893 | MS.gene006424:intron | 50.0% | |
TTACTCAAACCATTCCGCCG+CGG | + | chr1.3:70919078-70919097 | None:intergenic | 50.0% | |
! | AATTGTGGCTGCTTTGCTGC+TGG | - | chr1.3:70917157-70917176 | MS.gene006424:intron | 50.0% |
! | GGTGGGGTGAATTGAGGTTT+TGG | - | chr1.3:70915938-70915957 | MS.gene006424:intron | 50.0% |
! | GTTCCACCCTCAATTGGTTC+TGG | + | chr1.3:70920579-70920598 | None:intergenic | 50.0% |
! | TAAGTGCAGCTCGGTGATTC+AGG | + | chr1.3:70916294-70916313 | None:intergenic | 50.0% |
! | TCCGTCAGAGTACTCCCAAA+AGG | - | chr1.3:70916442-70916461 | MS.gene006424:intron | 50.0% |
!! | GTTGCGGCTATTGGTTCCAA+AGG | + | chr1.3:70915560-70915579 | None:intergenic | 50.0% |
AACAGGCAAAATTCGGGCCC+CGG | + | chr1.3:70918691-70918710 | None:intergenic | 55.0% | |
GACGCTGAACTCACTTGGCA+TGG | - | chr1.3:70914996-70915015 | MS.gene006424:intron | 55.0% | |
GTATCTCCTACTCGCAGTGG+TGG | - | chr1.3:70917877-70917896 | MS.gene006424:intron | 55.0% | |
TTGTTAAACGGAAGCCGCGG+CGG | - | chr1.3:70919061-70919080 | MS.gene006424:intron | 55.0% | |
GCTGCTGGAGTCTACTGCAC+AGG | - | chr1.3:70917172-70917191 | MS.gene006424:intron | 60.0% | |
GGGCCAGAACCAATTGAGGG+TGG | - | chr1.3:70920573-70920592 | MS.gene006424:intron | 60.0% | |
TTCCTGCCACCACTGCGAGT+AGG | + | chr1.3:70917886-70917905 | None:intergenic | 60.0% | |
!! | CTGCGTCGTCGCTTTGAAGC+TGG | + | chr1.3:70917442-70917461 | None:intergenic | 60.0% |
AAACGGAAGCCGCGGCGGAA+TGG | - | chr1.3:70919066-70919085 | MS.gene006424:intron | 65.0% | |
CTCCTACTCGCAGTGGTGGC+AGG | - | chr1.3:70917881-70917900 | MS.gene006424:intron | 65.0% | |
GGCCCCGGACAACACCATTC+GGG | + | chr1.3:70918676-70918695 | None:intergenic | 65.0% | |
GGGCCCCGGACAACACCATT+CGG | + | chr1.3:70918677-70918696 | None:intergenic | 65.0% | |
!! | CGGGCCCGAATGGTGTTGTC+CGG | - | chr1.3:70918669-70918688 | MS.gene006424:CDS | 65.0% |
!! | GGCCCGAATGGTGTTGTCCG+GGG | - | chr1.3:70918671-70918690 | MS.gene006424:CDS | 65.0% |
!! | GGGCCCGAATGGTGTTGTCC+GGG | - | chr1.3:70918670-70918689 | MS.gene006424:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.3 | gene | 70914653 | 70920647 | 70914653 | ID=MS.gene006424 |
chr1.3 | mRNA | 70914653 | 70920647 | 70914653 | ID=MS.gene006424.t1;Parent=MS.gene006424 |
chr1.3 | exon | 70920600 | 70920647 | 70920600 | ID=MS.gene006424.t1.exon1;Parent=MS.gene006424.t1 |
chr1.3 | CDS | 70920600 | 70920647 | 70920600 | ID=cds.MS.gene006424.t1;Parent=MS.gene006424.t1 |
chr1.3 | exon | 70920221 | 70920381 | 70920221 | ID=MS.gene006424.t1.exon2;Parent=MS.gene006424.t1 |
chr1.3 | CDS | 70920221 | 70920381 | 70920221 | ID=cds.MS.gene006424.t1;Parent=MS.gene006424.t1 |
chr1.3 | exon | 70919642 | 70920134 | 70919642 | ID=MS.gene006424.t1.exon3;Parent=MS.gene006424.t1 |
chr1.3 | CDS | 70919642 | 70920134 | 70919642 | ID=cds.MS.gene006424.t1;Parent=MS.gene006424.t1 |
chr1.3 | exon | 70919077 | 70919137 | 70919077 | ID=MS.gene006424.t1.exon4;Parent=MS.gene006424.t1 |
chr1.3 | CDS | 70919077 | 70919137 | 70919077 | ID=cds.MS.gene006424.t1;Parent=MS.gene006424.t1 |
chr1.3 | exon | 70918660 | 70918960 | 70918660 | ID=MS.gene006424.t1.exon5;Parent=MS.gene006424.t1 |
chr1.3 | CDS | 70918660 | 70918960 | 70918660 | ID=cds.MS.gene006424.t1;Parent=MS.gene006424.t1 |
chr1.3 | exon | 70918480 | 70918554 | 70918480 | ID=MS.gene006424.t1.exon6;Parent=MS.gene006424.t1 |
chr1.3 | CDS | 70918480 | 70918554 | 70918480 | ID=cds.MS.gene006424.t1;Parent=MS.gene006424.t1 |
chr1.3 | exon | 70917964 | 70918144 | 70917964 | ID=MS.gene006424.t1.exon7;Parent=MS.gene006424.t1 |
chr1.3 | CDS | 70917964 | 70918144 | 70917964 | ID=cds.MS.gene006424.t1;Parent=MS.gene006424.t1 |
chr1.3 | exon | 70917781 | 70917879 | 70917781 | ID=MS.gene006424.t1.exon8;Parent=MS.gene006424.t1 |
chr1.3 | CDS | 70917781 | 70917879 | 70917781 | ID=cds.MS.gene006424.t1;Parent=MS.gene006424.t1 |
chr1.3 | exon | 70917567 | 70917696 | 70917567 | ID=MS.gene006424.t1.exon9;Parent=MS.gene006424.t1 |
chr1.3 | CDS | 70917567 | 70917696 | 70917567 | ID=cds.MS.gene006424.t1;Parent=MS.gene006424.t1 |
chr1.3 | exon | 70914653 | 70914933 | 70914653 | ID=MS.gene006424.t1.exon10;Parent=MS.gene006424.t1 |
chr1.3 | CDS | 70914653 | 70914933 | 70914653 | ID=cds.MS.gene006424.t1;Parent=MS.gene006424.t1 |
Gene Sequence |
Protein sequence |