Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene00687.t1 | XP_024632961.1 | 84.9 | 794 | 92 | 4 | 1 | 766 | 1 | 794 | 0.00E+00 | 1346.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene00687.t1 | Q9SZL8 | 26.9 | 636 | 395 | 11 | 32 | 665 | 70 | 637 | 2.8e-63 | 245.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene00687.t1 | D3YBB9 | 77.0 | 774 | 158 | 4 | 1 | 764 | 49 | 812 | 0.0e+00 | 1194.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene00687.t1 | TF | FAR1 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene00687.t1 | MTR_0558s0020 | 87.162 | 296 | 37 | 1 | 1 | 295 | 1 | 296 | 0.0 | 546 |
| MS.gene00687.t1 | MTR_1g083640 | 82.746 | 284 | 33 | 1 | 1 | 268 | 1 | 284 | 3.76e-171 | 494 |
| MS.gene00687.t1 | MTR_8g446020 | 73.898 | 295 | 38 | 1 | 1 | 295 | 1 | 256 | 1.33e-152 | 445 |
| MS.gene00687.t1 | MTR_6g090505 | 83.122 | 237 | 40 | 0 | 65 | 301 | 1 | 237 | 1.66e-141 | 421 |
| MS.gene00687.t1 | MTR_6g090505 | 67.647 | 102 | 6 | 2 | 396 | 495 | 230 | 306 | 3.43e-34 | 135 |
| MS.gene00687.t1 | MTR_6g090505 | 77.551 | 49 | 11 | 0 | 567 | 615 | 314 | 362 | 9.22e-12 | 67.8 |
| MS.gene00687.t1 | MTR_2g014100 | 81.633 | 245 | 36 | 1 | 1 | 236 | 1 | 245 | 1.99e-140 | 414 |
| MS.gene00687.t1 | MTR_0337s0040 | 71.648 | 261 | 34 | 2 | 1 | 260 | 1 | 222 | 4.05e-123 | 369 |
| MS.gene00687.t1 | MTR_3g008240 | 83.744 | 203 | 32 | 1 | 1 | 202 | 1 | 203 | 1.19e-116 | 351 |
| MS.gene00687.t1 | MTR_4g040430 | 83.168 | 202 | 30 | 1 | 1 | 202 | 1 | 198 | 3.61e-116 | 349 |
| MS.gene00687.t1 | MTR_0337s0060 | 59.494 | 316 | 28 | 4 | 447 | 759 | 21 | 239 | 2.57e-110 | 336 |
| MS.gene00687.t1 | MTR_5g071590 | 72.778 | 180 | 36 | 2 | 1 | 167 | 1 | 180 | 3.84e-88 | 276 |
| MS.gene00687.t1 | MTR_1g055240 | 87.324 | 142 | 18 | 0 | 91 | 232 | 3 | 144 | 1.12e-85 | 268 |
| MS.gene00687.t1 | MTR_0019s0290 | 81.579 | 152 | 28 | 0 | 82 | 233 | 9 | 160 | 5.86e-85 | 266 |
| MS.gene00687.t1 | MTR_3g028680 | 80.921 | 152 | 26 | 1 | 618 | 766 | 1 | 152 | 7.46e-81 | 257 |
| MS.gene00687.t1 | MTR_2g067090 | 66.492 | 191 | 34 | 3 | 621 | 782 | 99 | 288 | 5.01e-73 | 240 |
| MS.gene00687.t1 | MTR_4g133495 | 63.536 | 181 | 40 | 2 | 576 | 753 | 88 | 245 | 9.92e-68 | 225 |
| MS.gene00687.t1 | MTR_4g133340 | 63.536 | 181 | 40 | 2 | 576 | 753 | 88 | 245 | 9.92e-68 | 225 |
| MS.gene00687.t1 | MTR_1281s0010 | 79.817 | 109 | 22 | 0 | 19 | 127 | 1 | 109 | 2.65e-55 | 186 |
| MS.gene00687.t1 | MTR_6g051425 | 32.075 | 318 | 185 | 6 | 40 | 341 | 22 | 324 | 3.84e-38 | 145 |
| MS.gene00687.t1 | MTR_4g008820 | 70.000 | 100 | 29 | 1 | 1 | 99 | 125 | 224 | 1.65e-31 | 131 |
| MS.gene00687.t1 | MTR_8g046060 | 77.273 | 88 | 11 | 2 | 1 | 79 | 91 | 178 | 3.38e-31 | 122 |
| MS.gene00687.t1 | MTR_1g070355 | 26.543 | 324 | 217 | 6 | 41 | 362 | 80 | 384 | 5.90e-19 | 91.7 |
| MS.gene00687.t1 | MTR_2g067130 | 61.333 | 75 | 23 | 2 | 695 | 766 | 46 | 117 | 1.42e-18 | 84.0 |
| MS.gene00687.t1 | MTR_0402s0040 | 26.486 | 185 | 117 | 4 | 49 | 233 | 40 | 205 | 1.57e-14 | 77.4 |
| MS.gene00687.t1 | MTR_0337s0050 | 75.000 | 36 | 9 | 0 | 259 | 294 | 14 | 49 | 1.64e-13 | 66.6 |
| MS.gene00687.t1 | MTR_4g035820 | 22.414 | 290 | 192 | 7 | 17 | 299 | 61 | 324 | 1.09e-12 | 72.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene00687.t1 | AT4G38180 | 27.613 | 641 | 384 | 13 | 32 | 665 | 70 | 637 | 5.40e-70 | 246 |
| MS.gene00687.t1 | AT4G15090 | 24.827 | 721 | 448 | 16 | 50 | 753 | 66 | 709 | 2.79e-60 | 219 |
| MS.gene00687.t1 | AT4G15090 | 24.827 | 721 | 448 | 16 | 50 | 753 | 66 | 709 | 2.79e-60 | 219 |
| MS.gene00687.t1 | AT4G15090 | 24.827 | 721 | 448 | 16 | 50 | 753 | 66 | 709 | 2.79e-60 | 219 |
| MS.gene00687.t1 | AT4G15090 | 24.827 | 721 | 448 | 16 | 50 | 753 | 66 | 709 | 2.79e-60 | 219 |
| MS.gene00687.t1 | AT4G15090 | 24.827 | 721 | 448 | 16 | 50 | 753 | 66 | 709 | 2.79e-60 | 219 |
| MS.gene00687.t1 | AT2G27110 | 26.298 | 597 | 366 | 15 | 127 | 719 | 108 | 634 | 1.94e-53 | 199 |
| MS.gene00687.t1 | AT2G27110 | 26.298 | 597 | 366 | 15 | 127 | 719 | 108 | 634 | 1.94e-53 | 199 |
| MS.gene00687.t1 | AT2G27110 | 27.308 | 509 | 313 | 11 | 213 | 719 | 36 | 489 | 4.34e-53 | 196 |
| MS.gene00687.t1 | AT3G06250 | 24.961 | 633 | 352 | 16 | 34 | 661 | 189 | 703 | 1.59e-51 | 193 |
| MS.gene00687.t1 | AT3G06250 | 24.961 | 633 | 352 | 16 | 34 | 661 | 189 | 703 | 1.59e-51 | 193 |
| MS.gene00687.t1 | AT3G06250 | 24.961 | 633 | 352 | 16 | 34 | 661 | 189 | 703 | 1.59e-51 | 193 |
| MS.gene00687.t1 | AT1G76320 | 24.815 | 677 | 413 | 19 | 50 | 720 | 12 | 598 | 1.03e-50 | 189 |
| MS.gene00687.t1 | AT1G76320 | 24.852 | 676 | 412 | 19 | 50 | 719 | 12 | 597 | 4.56e-50 | 188 |
| MS.gene00687.t1 | AT1G76320 | 24.852 | 676 | 412 | 19 | 50 | 719 | 12 | 597 | 4.94e-50 | 188 |
| MS.gene00687.t1 | AT1G76320 | 24.852 | 676 | 412 | 19 | 50 | 719 | 12 | 597 | 4.94e-50 | 188 |
| MS.gene00687.t1 | AT3G22170 | 23.144 | 687 | 420 | 17 | 34 | 708 | 69 | 659 | 1.37e-48 | 185 |
| MS.gene00687.t1 | AT3G22170 | 23.144 | 687 | 420 | 17 | 34 | 708 | 69 | 659 | 1.37e-48 | 185 |
| MS.gene00687.t1 | AT5G18960 | 24.575 | 647 | 360 | 18 | 24 | 661 | 200 | 727 | 6.14e-46 | 176 |
| MS.gene00687.t1 | AT5G18960 | 24.575 | 647 | 360 | 18 | 24 | 661 | 200 | 727 | 6.14e-46 | 176 |
| MS.gene00687.t1 | AT4G38170 | 25.290 | 431 | 264 | 11 | 235 | 662 | 24 | 399 | 5.03e-44 | 167 |
| MS.gene00687.t1 | AT1G10240 | 24.880 | 623 | 376 | 19 | 49 | 659 | 62 | 604 | 2.20e-42 | 165 |
| MS.gene00687.t1 | AT1G10240 | 24.880 | 623 | 376 | 19 | 49 | 659 | 62 | 604 | 2.20e-42 | 165 |
| MS.gene00687.t1 | AT5G28530 | 24.100 | 639 | 388 | 17 | 40 | 660 | 60 | 619 | 2.39e-41 | 162 |
| MS.gene00687.t1 | AT2G32250 | 24.161 | 745 | 428 | 21 | 4 | 743 | 10 | 622 | 1.06e-40 | 160 |
| MS.gene00687.t1 | AT2G32250 | 24.161 | 745 | 428 | 21 | 4 | 743 | 10 | 622 | 1.15e-40 | 160 |
| MS.gene00687.t1 | AT2G32250 | 24.161 | 745 | 428 | 21 | 4 | 743 | 10 | 622 | 1.15e-40 | 160 |
| MS.gene00687.t1 | AT2G32250 | 24.161 | 745 | 428 | 21 | 4 | 743 | 10 | 622 | 1.18e-40 | 160 |
| MS.gene00687.t1 | AT2G32250 | 24.161 | 745 | 428 | 21 | 4 | 743 | 10 | 622 | 1.18e-40 | 160 |
| MS.gene00687.t1 | AT2G32250 | 24.161 | 745 | 428 | 21 | 4 | 743 | 10 | 622 | 1.18e-40 | 160 |
| MS.gene00687.t1 | AT5G28530 | 23.944 | 639 | 385 | 18 | 40 | 660 | 60 | 615 | 2.46e-40 | 159 |
| MS.gene00687.t1 | AT5G28530 | 23.944 | 639 | 385 | 18 | 40 | 660 | 60 | 615 | 2.46e-40 | 159 |
| MS.gene00687.t1 | AT2G32250 | 24.177 | 699 | 396 | 19 | 50 | 743 | 12 | 581 | 6.72e-40 | 158 |
| MS.gene00687.t1 | AT2G32250 | 24.177 | 699 | 396 | 19 | 50 | 743 | 12 | 581 | 8.75e-40 | 157 |
| MS.gene00687.t1 | AT1G80010 | 24.100 | 639 | 390 | 22 | 41 | 662 | 101 | 661 | 6.65e-37 | 149 |
| MS.gene00687.t1 | AT1G52520 | 22.311 | 623 | 408 | 15 | 41 | 662 | 91 | 638 | 1.47e-33 | 138 |
| MS.gene00687.t1 | AT4G19990 | 28.731 | 268 | 184 | 4 | 219 | 483 | 163 | 426 | 1.64e-27 | 119 |
| MS.gene00687.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 591 | 721 | 495 | 615 | 1.35e-12 | 72.0 |
| MS.gene00687.t1 | AT4G19990 | 28.731 | 268 | 184 | 4 | 219 | 483 | 106 | 369 | 1.68e-27 | 119 |
| MS.gene00687.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 591 | 721 | 438 | 558 | 1.43e-12 | 71.6 |
| MS.gene00687.t1 | AT4G19990 | 28.731 | 268 | 184 | 4 | 219 | 483 | 163 | 426 | 1.89e-27 | 119 |
| MS.gene00687.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 591 | 721 | 495 | 615 | 1.39e-12 | 72.0 |
| MS.gene00687.t1 | AT4G19990 | 28.731 | 268 | 184 | 4 | 219 | 483 | 163 | 426 | 1.89e-27 | 119 |
| MS.gene00687.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 591 | 721 | 495 | 615 | 1.39e-12 | 72.0 |
| MS.gene00687.t1 | AT4G19990 | 28.731 | 268 | 184 | 4 | 219 | 483 | 177 | 440 | 1.92e-27 | 119 |
| MS.gene00687.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 591 | 721 | 509 | 629 | 1.58e-12 | 71.6 |
| MS.gene00687.t1 | AT4G19990 | 28.731 | 268 | 184 | 4 | 219 | 483 | 163 | 426 | 2.13e-27 | 119 |
| MS.gene00687.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 591 | 721 | 495 | 615 | 1.34e-12 | 72.0 |
| MS.gene00687.t1 | AT4G19990 | 28.731 | 268 | 184 | 4 | 219 | 483 | 163 | 426 | 2.13e-27 | 119 |
| MS.gene00687.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 591 | 721 | 495 | 615 | 1.34e-12 | 72.0 |
| MS.gene00687.t1 | AT5G28530 | 21.781 | 629 | 352 | 20 | 40 | 660 | 60 | 556 | 4.42e-22 | 102 |
| MS.gene00687.t1 | AT5G28530 | 21.622 | 629 | 349 | 21 | 40 | 660 | 60 | 552 | 2.85e-21 | 99.4 |
Find 114 sgRNAs with CRISPR-Local
Find 173 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCATGCTGAGTTGGACTTTA+AGG | 0.133287 | 2.4:+62499081 | MS.gene00687:CDS |
| TTTCGATGAGTTAACTAATT+TGG | 0.156761 | 2.4:+62498772 | MS.gene00687:CDS |
| AGTCGCTTCTTTGACCTAAT+TGG | 0.186128 | 2.4:-62499907 | None:intergenic |
| CTTTAGTCATTTCAACATTA+TGG | 0.194287 | 2.4:+62499039 | MS.gene00687:CDS |
| CAACAAGATTATGCTCTATT+TGG | 0.198611 | 2.4:+62497988 | MS.gene00687:CDS |
| TTCATTTCAGCTGCCTTTCT+TGG | 0.201003 | 2.4:+62498491 | MS.gene00687:intron |
| CATCGTAAGAGTGTGTTATT+TGG | 0.276792 | 2.4:+62498524 | MS.gene00687:CDS |
| TATGGTTTGAGGTTTCTTAT+TGG | 0.280533 | 2.4:-62498618 | None:intergenic |
| TTCTTTGACCTAATTGGATT+TGG | 0.299426 | 2.4:-62499901 | None:intergenic |
| AATCAGATTTCGACTACAAT+TGG | 0.318540 | 2.4:+62498813 | MS.gene00687:CDS |
| TGTTCTTGAGGCAGGGAAAA+AGG | 0.322946 | 2.4:+62499753 | MS.gene00687:CDS |
| GCCGATATTTATTGTTTGTT+CGG | 0.341758 | 2.4:-62498038 | None:intergenic |
| GGTTTCGAATGTTGATGTTT+TGG | 0.354913 | 2.4:+62499336 | MS.gene00687:CDS |
| ACTAGCCTGGTCTGTGTATA+TGG | 0.360230 | 2.4:-62498636 | None:intergenic |
| TATGCATTGGTCTTCAGTTT+GGG | 0.370760 | 2.4:+62498913 | MS.gene00687:CDS |
| CTCAACGGTGTTCTTGAGGC+AGG | 0.386173 | 2.4:+62499745 | MS.gene00687:CDS |
| AACAATAAATATCGGCCATT+AGG | 0.388497 | 2.4:+62498045 | MS.gene00687:CDS |
| ACCGAACAAACAATAAATAT+CGG | 0.389395 | 2.4:+62498037 | MS.gene00687:CDS |
| GTATGCATTGGTCTTCAGTT+TGG | 0.392120 | 2.4:+62498912 | MS.gene00687:CDS |
| GTCTTTAGTGCCAACATTCA+TGG | 0.395146 | 2.4:-62499629 | None:intergenic |
| TTCTCATACTCAACAAGAAC+TGG | 0.395633 | 2.4:-62497508 | None:intergenic |
| AAGAAAGACCAAATCCAATT+AGG | 0.397771 | 2.4:+62499893 | MS.gene00687:CDS |
| TTTGGTCTTTCTTTGAACTT+TGG | 0.398856 | 2.4:-62499883 | None:intergenic |
| TTCCTTCAAATACTATTATG+AGG | 0.399583 | 2.4:+62499213 | MS.gene00687:CDS |
| GAGGAGTTTCTTATTTCTAA+AGG | 0.403538 | 2.4:+62499778 | MS.gene00687:CDS |
| TAAAGAATCATGGAAGTCTT+TGG | 0.408500 | 2.4:+62497279 | MS.gene00687:CDS |
| CATGTCGTATGTTTGAGAAC+CGG | 0.411671 | 2.4:+62499461 | MS.gene00687:CDS |
| GATTATGATCTTCAAACCTT+GGG | 0.413114 | 2.4:-62499384 | None:intergenic |
| ATAACACTGGATTCTCTGTT+AGG | 0.417808 | 2.4:+62497350 | MS.gene00687:CDS |
| GGGTTGTCACAGTCGACATT+AGG | 0.419786 | 2.4:+62499419 | MS.gene00687:CDS |
| CGATTATGATCTTCAAACCT+TGG | 0.425681 | 2.4:-62499385 | None:intergenic |
| CGAGAAGTAAATGAAGTTCA+AGG | 0.430014 | 2.4:+62497685 | MS.gene00687:CDS |
| AGCTGGAATATATTTGAAGT+TGG | 0.433136 | 2.4:+62497567 | MS.gene00687:CDS |
| TGGTCTGTGTATATGGTTTG+AGG | 0.447350 | 2.4:-62498629 | None:intergenic |
| GAAAGGGTTGGTTGTAAAGC+TGG | 0.447509 | 2.4:+62497550 | MS.gene00687:CDS |
| CGCTTTAAAACATATTGTGC+AGG | 0.447633 | 2.4:-62499562 | None:intergenic |
| CGTTATGCTTGTAACAAAGA+AGG | 0.449439 | 2.4:+62497433 | MS.gene00687:CDS |
| GCTTTAATAAATTCTAAAGC+TGG | 0.450264 | 2.4:+62497715 | MS.gene00687:CDS |
| ATCTGAGAGTGGACAATTGA+CGG | 0.452529 | 2.4:+62497204 | MS.gene00687:CDS |
| TGGTCTTTGCTCATGGCACA+TGG | 0.452802 | 2.4:+62498703 | MS.gene00687:CDS |
| GGCCTACTTCGGACTTTAAG+TGG | 0.458978 | 2.4:+62498867 | MS.gene00687:CDS |
| ATGTCGTATGTTTGAGAACC+GGG | 0.461344 | 2.4:+62499462 | MS.gene00687:CDS |
| ACAAAATAAGAAATCGGATA+AGG | 0.469178 | 2.4:+62497399 | MS.gene00687:CDS |
| GAAGTGATGGGTCAAGGAGT+TGG | 0.484292 | 2.4:+62497760 | MS.gene00687:CDS |
| CTCCTCATAATAGTATTTGA+AGG | 0.485089 | 2.4:-62499215 | None:intergenic |
| TTACAACCAACCCTTTCCTC+TGG | 0.485330 | 2.4:-62497544 | None:intergenic |
| TTTAATTATGCATATAACAC+TGG | 0.485542 | 2.4:+62497337 | MS.gene00687:CDS |
| TCTAATGACAACTCGTCAAA+AGG | 0.488137 | 2.4:+62497828 | MS.gene00687:CDS |
| CTCAAGTAGCACAAATGCTC+TGG | 0.489977 | 2.4:-62497655 | None:intergenic |
| CAATTCACAAAATAAGAAAT+CGG | 0.490263 | 2.4:+62497393 | MS.gene00687:CDS |
| TATGAGGAGGACACAACAAA+AGG | 0.490908 | 2.4:+62499229 | MS.gene00687:CDS |
| ATGATTGTCAAAACCAAGAA+AGG | 0.491378 | 2.4:-62498504 | None:intergenic |
| CTGTCTATGAACCATCTGTT+GGG | 0.491412 | 2.4:+62499854 | MS.gene00687:CDS |
| ATCAGATTTCGACTACAATT+GGG | 0.491708 | 2.4:+62498814 | MS.gene00687:CDS |
| CGTCAAAAGGAGATGGTGGC+TGG | 0.492100 | 2.4:+62497841 | MS.gene00687:CDS |
| ACATTATGGTTCAGAGAATG+AGG | 0.494022 | 2.4:+62499053 | MS.gene00687:CDS |
| GACCGCATAAGCTGACTGTT+GGG | 0.496307 | 2.4:-62499133 | None:intergenic |
| GAGAACATCTTATGAAGTGA+TGG | 0.499875 | 2.4:+62497747 | MS.gene00687:CDS |
| TGTCTTCTGCAGCATCAACT+TGG | 0.502977 | 2.4:-62497933 | None:intergenic |
| AAATGCTCTGGTTTATGTAA+TGG | 0.504865 | 2.4:-62497643 | None:intergenic |
| CTCATTCAAATCGTATGCAT+TGG | 0.507227 | 2.4:+62498900 | MS.gene00687:CDS |
| ATCATAATCGACTTGATGAA+AGG | 0.507955 | 2.4:+62499398 | MS.gene00687:CDS |
| TTTAAGTCCGAAAATCGAAA+AGG | 0.508080 | 2.4:-62497799 | None:intergenic |
| GAGGGATAATCATGCTGAGT+TGG | 0.508852 | 2.4:+62499072 | MS.gene00687:CDS |
| ATTGGTCTTCAGTTTGGGTG+AGG | 0.509410 | 2.4:+62498918 | MS.gene00687:CDS |
| TGTCTATAAGATATATAAGT+GGG | 0.514682 | 2.4:+62497603 | MS.gene00687:CDS |
| GATCTTCAAACCTTGGGGAA+AGG | 0.519004 | 2.4:-62499378 | None:intergenic |
| TAAAGAATCGAACAAGTGAA+TGG | 0.519618 | 2.4:-62499021 | None:intergenic |
| TCATAATCGACTTGATGAAA+GGG | 0.526860 | 2.4:+62499399 | MS.gene00687:CDS |
| CATAATAGTATTTGAAGGAA+AGG | 0.529686 | 2.4:-62499210 | None:intergenic |
| ACTTCAACAACGCACTAGCC+TGG | 0.534735 | 2.4:-62498649 | None:intergenic |
| TAACAAAGAAGGTTTCAAGA+AGG | 0.538422 | 2.4:+62497444 | MS.gene00687:CDS |
| AATCGAACAAGTGAATGGTC+TGG | 0.540971 | 2.4:-62499016 | None:intergenic |
| ATGAGGAGGACACAACAAAA+GGG | 0.542065 | 2.4:+62499230 | MS.gene00687:CDS |
| AACAAAGAAGGTTTCAAGAA+GGG | 0.545537 | 2.4:+62497445 | MS.gene00687:CDS |
| CATTTAGTGATAAAGAATCA+TGG | 0.546005 | 2.4:+62497269 | MS.gene00687:CDS |
| CTGAAATCCACCATGAATGT+TGG | 0.557140 | 2.4:+62499619 | MS.gene00687:CDS |
| AATGAAGCTCTCTCGAAACC+AGG | 0.565261 | 2.4:+62497895 | MS.gene00687:CDS |
| GCTGTCTATGAACCATCTGT+TGG | 0.568181 | 2.4:+62499853 | MS.gene00687:CDS |
| GTGATGGGTCAAGGAGTTGG+AGG | 0.568802 | 2.4:+62497763 | MS.gene00687:CDS |
| TACACGTGTTTGCGCAGATG+CGG | 0.571672 | 2.4:+62499705 | MS.gene00687:CDS |
| ATGTCTATAAGATATATAAG+TGG | 0.572287 | 2.4:+62497602 | MS.gene00687:CDS |
| GGACCGCATAAGCTGACTGT+TGG | 0.579264 | 2.4:-62499134 | None:intergenic |
| TTTGGTGCAGTCCCAACAGA+TGG | 0.581566 | 2.4:-62499865 | None:intergenic |
| TGGTGTATACTTGTTTACTA+CGG | 0.585960 | 2.4:-62499155 | None:intergenic |
| ATATTAACTTCATCTGAGAG+TGG | 0.588105 | 2.4:+62497193 | MS.gene00687:CDS |
| TCTTATGAAGTGATGGGTCA+AGG | 0.589029 | 2.4:+62497754 | MS.gene00687:CDS |
| TCAACGGTGTTCTTGAGGCA+GGG | 0.590097 | 2.4:+62499746 | MS.gene00687:CDS |
| ATTTCTCAACGGTGTTCTTG+AGG | 0.591378 | 2.4:+62499741 | MS.gene00687:CDS |
| ATAAGTTAGGAAAGATGATG+AGG | 0.591839 | 2.4:+62500047 | MS.gene00687:intron |
| TTGAAGAAAACCTTTCCCCA+AGG | 0.594796 | 2.4:+62499368 | MS.gene00687:CDS |
| TGAAGACTTAGAAGGCGTAA+CGG | 0.598405 | 2.4:-62499821 | None:intergenic |
| GACAACTCGTCAAAAGGAGA+TGG | 0.599038 | 2.4:+62497834 | MS.gene00687:CDS |
| TTGATATCGTTGTGCTTGAG+TGG | 0.601464 | 2.4:-62499653 | None:intergenic |
| AGAACATCTTATGAAGTGAT+GGG | 0.601988 | 2.4:+62497748 | MS.gene00687:CDS |
| AACTCGTCAAAAGGAGATGG+TGG | 0.603142 | 2.4:+62497837 | MS.gene00687:CDS |
| ACGTGTTTGCGCAGATGCGG+AGG | 0.605934 | 2.4:+62499708 | MS.gene00687:CDS |
| ATCCCAACAGTCAGCTTATG+CGG | 0.606153 | 2.4:+62499131 | MS.gene00687:CDS |
| CTTCAAATACTATTATGAGG+AGG | 0.607664 | 2.4:+62499216 | MS.gene00687:CDS |
| AGAACTGGACTGCCACATGT+TGG | 0.612393 | 2.4:-62497493 | None:intergenic |
| AGCCACTTAAAGTCCGAAGT+AGG | 0.621799 | 2.4:-62498869 | None:intergenic |
| GGGTCAAGGAGTTGGAGGCA+CGG | 0.621882 | 2.4:+62497768 | MS.gene00687:CDS |
| ATTATGATCTTCAAACCTTG+GGG | 0.630358 | 2.4:-62499383 | None:intergenic |
| GGTCTTTGCTCATGGCACAT+GGG | 0.639768 | 2.4:+62498704 | MS.gene00687:CDS |
| TTTAGTGCCAACATTCATGG+TGG | 0.641441 | 2.4:-62499626 | None:intergenic |
| CATTATGGTTCAGAGAATGA+GGG | 0.643278 | 2.4:+62499054 | MS.gene00687:CDS |
| GATTTCAGCTTATCGACAGA+CGG | 0.644926 | 2.4:-62499604 | None:intergenic |
| TGAATAAATGAAAAGCAAGA+TGG | 0.655697 | 2.4:-62499175 | None:intergenic |
| GCATCTGAAATATTTCTCAA+CGG | 0.661104 | 2.4:+62499730 | MS.gene00687:CDS |
| CATGTCGACATAAGAAACCC+CGG | 0.663279 | 2.4:-62499480 | None:intergenic |
| TGTCGTATGTTTGAGAACCG+GGG | 0.673760 | 2.4:+62499463 | MS.gene00687:CDS |
| ATGTTGATAATGATAATGAG+AGG | 0.683310 | 2.4:+62499314 | MS.gene00687:CDS |
| TCAAACCATATACACAGACC+AGG | 0.683597 | 2.4:+62498631 | MS.gene00687:CDS |
| TGTTGATAATGATAATGAGA+GGG | 0.689129 | 2.4:+62499315 | MS.gene00687:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTATGTTATAAGTT+AGG | + | chr2.4:62500034-62500053 | MS.gene00687:intron | 10.0% |
| !! | ATGTCTATAAGATATATAAG+TGG | + | chr2.4:62497602-62497621 | MS.gene00687:CDS | 20.0% |
| !! | CAATTCACAAAATAAGAAAT+CGG | + | chr2.4:62497393-62497412 | MS.gene00687:CDS | 20.0% |
| !! | TGTCTATAAGATATATAAGT+GGG | + | chr2.4:62497603-62497622 | MS.gene00687:CDS | 20.0% |
| !! | TTTAATTATGCATATAACAC+TGG | + | chr2.4:62497337-62497356 | MS.gene00687:CDS | 20.0% |
| !!! | AATTTAATGTTCTGGTTTAT+GGG | + | chr2.4:62498220-62498239 | MS.gene00687:intron | 20.0% |
| !!! | ATGATGAAAAACTGTTTTAA+TGG | + | chr2.4:62498842-62498861 | MS.gene00687:CDS | 20.0% |
| !!! | TGAATGTTTATATTGATTGA+AGG | + | chr2.4:62498192-62498211 | MS.gene00687:intron | 20.0% |
| ! | AAAACACCTTGAAAAACATT+CGG | - | chr2.4:62498680-62498699 | None:intergenic | 25.0% |
| ! | ACAAAATAAGAAATCGGATA+AGG | + | chr2.4:62497399-62497418 | MS.gene00687:CDS | 25.0% |
| ! | ACCGAACAAACAATAAATAT+CGG | + | chr2.4:62498037-62498056 | MS.gene00687:CDS | 25.0% |
| ! | AGTACAAAATACTAACCTAA+TGG | - | chr2.4:62498063-62498082 | None:intergenic | 25.0% |
| ! | CATAATAGTATTTGAAGGAA+AGG | - | chr2.4:62499213-62499232 | None:intergenic | 25.0% |
| ! | CATTTAGTGATAAAGAATCA+TGG | + | chr2.4:62497269-62497288 | MS.gene00687:CDS | 25.0% |
| ! | CTTTAGTCATTTCAACATTA+TGG | + | chr2.4:62499039-62499058 | MS.gene00687:CDS | 25.0% |
| ! | TGAAATTTGAATGAATGTTC+TGG | + | chr2.4:62498110-62498129 | MS.gene00687:intron | 25.0% |
| ! | TGAATAAATGAAAAGCAAGA+TGG | - | chr2.4:62499178-62499197 | None:intergenic | 25.0% |
| ! | TTCCTTCAAATACTATTATG+AGG | + | chr2.4:62499213-62499232 | MS.gene00687:CDS | 25.0% |
| ! | TTTCGATGAGTTAACTAATT+TGG | + | chr2.4:62498772-62498791 | MS.gene00687:CDS | 25.0% |
| !! | AGGTTTAGAATTTAATGTTC+TGG | + | chr2.4:62498212-62498231 | MS.gene00687:intron | 25.0% |
| !! | TGTTGTATTTTGTTCTGATT+TGG | + | chr2.4:62498468-62498487 | MS.gene00687:intron | 25.0% |
| !!! | ATGTTGATAATGATAATGAG+AGG | + | chr2.4:62499314-62499333 | MS.gene00687:CDS | 25.0% |
| !!! | CTTATTTTGTGAATTGTTCT+TGG | - | chr2.4:62497389-62497408 | None:intergenic | 25.0% |
| !!! | GAATTTAATGTTCTGGTTTA+TGG | + | chr2.4:62498219-62498238 | MS.gene00687:intron | 25.0% |
| !!! | GCTTTAATAAATTCTAAAGC+TGG | + | chr2.4:62497715-62497734 | MS.gene00687:CDS | 25.0% |
| !!! | TGAAAAACTGTTTTAATGGA+AGG | + | chr2.4:62498846-62498865 | MS.gene00687:CDS | 25.0% |
| !!! | TGTTGATAATGATAATGAGA+GGG | + | chr2.4:62499315-62499334 | MS.gene00687:CDS | 25.0% |
| AAACACATATGATCTTTCCA+TGG | - | chr2.4:62498283-62498302 | None:intergenic | 30.0% | |
| AACAAAGAAGGTTTCAAGAA+GGG | + | chr2.4:62497445-62497464 | MS.gene00687:CDS | 30.0% | |
| AACAATAAATATCGGCCATT+AGG | + | chr2.4:62498045-62498064 | MS.gene00687:CDS | 30.0% | |
| AAGAAAGACCAAATCCAATT+AGG | + | chr2.4:62499893-62499912 | MS.gene00687:CDS | 30.0% | |
| AATCAGATTTCGACTACAAT+TGG | + | chr2.4:62498813-62498832 | MS.gene00687:CDS | 30.0% | |
| AGAACATCTTATGAAGTGAT+GGG | + | chr2.4:62497748-62497767 | MS.gene00687:CDS | 30.0% | |
| ATAAGTTAGGAAAGATGATG+AGG | + | chr2.4:62500047-62500066 | MS.gene00687:intron | 30.0% | |
| ATATTAACTTCATCTGAGAG+TGG | + | chr2.4:62497193-62497212 | MS.gene00687:CDS | 30.0% | |
| ATCAGATTTCGACTACAATT+GGG | + | chr2.4:62498814-62498833 | MS.gene00687:CDS | 30.0% | |
| ATGATTGTCAAAACCAAGAA+AGG | - | chr2.4:62498507-62498526 | None:intergenic | 30.0% | |
| ATTATGATCTTCAAACCTTG+GGG | - | chr2.4:62499386-62499405 | None:intergenic | 30.0% | |
| CAACAAGATTATGCTCTATT+TGG | + | chr2.4:62497988-62498007 | MS.gene00687:CDS | 30.0% | |
| CTCCTCATAATAGTATTTGA+AGG | - | chr2.4:62499218-62499237 | None:intergenic | 30.0% | |
| CTGGTATATGTGTGTTAATT+TGG | + | chr2.4:62498149-62498168 | MS.gene00687:intron | 30.0% | |
| CTTCAAATACTATTATGAGG+AGG | + | chr2.4:62499216-62499235 | MS.gene00687:CDS | 30.0% | |
| GAGAATGCAAAGAAAAATCT+CGG | + | chr2.4:62498728-62498747 | MS.gene00687:CDS | 30.0% | |
| GATTATGATCTTCAAACCTT+GGG | - | chr2.4:62499387-62499406 | None:intergenic | 30.0% | |
| GCCGATATTTATTGTTTGTT+CGG | - | chr2.4:62498041-62498060 | None:intergenic | 30.0% | |
| TAAAGAAAAACCAGAGGAAA+GGG | + | chr2.4:62497534-62497553 | MS.gene00687:CDS | 30.0% | |
| TAAAGAATCATGGAAGTCTT+TGG | + | chr2.4:62497279-62497298 | MS.gene00687:CDS | 30.0% | |
| TAAAGAATCGAACAAGTGAA+TGG | - | chr2.4:62499024-62499043 | None:intergenic | 30.0% | |
| TAACAAAGAAGGTTTCAAGA+AGG | + | chr2.4:62497444-62497463 | MS.gene00687:CDS | 30.0% | |
| TGGATATCATAGTAAAAACC+TGG | - | chr2.4:62497916-62497935 | None:intergenic | 30.0% | |
| TGGTGTATACTTGTTTACTA+CGG | - | chr2.4:62499158-62499177 | None:intergenic | 30.0% | |
| TTCTTTGACCTAATTGGATT+TGG | - | chr2.4:62499904-62499923 | None:intergenic | 30.0% | |
| TTTAAGTCCGAAAATCGAAA+AGG | - | chr2.4:62497802-62497821 | None:intergenic | 30.0% | |
| TTTCTATTTACACAGCACAA+TGG | + | chr2.4:62498427-62498446 | MS.gene00687:intron | 30.0% | |
| ! | AAATGCTCTGGTTTATGTAA+TGG | - | chr2.4:62497646-62497665 | None:intergenic | 30.0% |
| ! | AGCTGGAATATATTTGAAGT+TGG | + | chr2.4:62497567-62497586 | MS.gene00687:CDS | 30.0% |
| ! | CAAAGTTTTCACAATTGAGA+AGG | + | chr2.4:62499273-62499292 | MS.gene00687:CDS | 30.0% |
| ! | GAATCTTCCTTTTCGATTTT+CGG | + | chr2.4:62497792-62497811 | MS.gene00687:CDS | 30.0% |
| ! | GAGGCTTTAACTAAAAAAAG+CGG | + | chr2.4:62500066-62500085 | MS.gene00687:CDS | 30.0% |
| ! | GCATCTGAAATATTTCTCAA+CGG | + | chr2.4:62499730-62499749 | MS.gene00687:CDS | 30.0% |
| ! | TATGGTTTGAGGTTTCTTAT+TGG | - | chr2.4:62498621-62498640 | None:intergenic | 30.0% |
| ! | TCAATTCCGAATGTTTTTCA+AGG | + | chr2.4:62498671-62498690 | MS.gene00687:CDS | 30.0% |
| ! | TGAGGCTTTAACAATTTAAG+CGG | + | chr2.4:62500002-62500021 | MS.gene00687:intron | 30.0% |
| ! | TTTGGTCTTTCTTTGAACTT+TGG | - | chr2.4:62499886-62499905 | None:intergenic | 30.0% |
| !! | ACATGTTTTCAAGATTTTGG+AGG | + | chr2.4:62499498-62499517 | MS.gene00687:CDS | 30.0% |
| !! | ATCATAATCGACTTGATGAA+AGG | + | chr2.4:62499398-62499417 | MS.gene00687:CDS | 30.0% |
| !! | ATGTTCTGGTTTAGAATTGA+AGG | + | chr2.4:62498124-62498143 | MS.gene00687:intron | 30.0% |
| !! | GAGGAGTTTCTTATTTCTAA+AGG | + | chr2.4:62499778-62499797 | MS.gene00687:CDS | 30.0% |
| !! | TCATAATCGACTTGATGAAA+GGG | + | chr2.4:62499399-62499418 | MS.gene00687:CDS | 30.0% |
| !! | TCGACATGTTTTCAAGATTT+TGG | + | chr2.4:62499495-62499514 | MS.gene00687:CDS | 30.0% |
| !!! | AAGACATAGCCAGTATTTTT+TGG | + | chr2.4:62497950-62497969 | MS.gene00687:CDS | 30.0% |
| !!! | AGACATAGCCAGTATTTTTT+GGG | + | chr2.4:62497951-62497970 | MS.gene00687:CDS | 30.0% |
| !!! | CTGCACAATATGTTTTAAAG+CGG | + | chr2.4:62499563-62499582 | MS.gene00687:CDS | 30.0% |
| !!! | GTTTTTCAAGGTGTTTTTCA+TGG | + | chr2.4:62498683-62498702 | MS.gene00687:CDS | 30.0% |
| ACATTATGGTTCAGAGAATG+AGG | + | chr2.4:62499053-62499072 | MS.gene00687:CDS | 35.0% | |
| ATAACACTGGATTCTCTGTT+AGG | + | chr2.4:62497350-62497369 | MS.gene00687:CDS | 35.0% | |
| CATAAATTCCAAGGCAAGAT+AGG | - | chr2.4:62498250-62498269 | None:intergenic | 35.0% | |
| CATTATGGTTCAGAGAATGA+GGG | + | chr2.4:62499054-62499073 | MS.gene00687:CDS | 35.0% | |
| CGAGAAGTAAATGAAGTTCA+AGG | + | chr2.4:62497685-62497704 | MS.gene00687:CDS | 35.0% | |
| CGATTATGATCTTCAAACCT+TGG | - | chr2.4:62499388-62499407 | None:intergenic | 35.0% | |
| CGTTATGCTTGTAACAAAGA+AGG | + | chr2.4:62497433-62497452 | MS.gene00687:CDS | 35.0% | |
| CTAAAGAAAAACCAGAGGAA+AGG | + | chr2.4:62497533-62497552 | MS.gene00687:CDS | 35.0% | |
| CTCATTCAAATCGTATGCAT+TGG | + | chr2.4:62498900-62498919 | MS.gene00687:CDS | 35.0% | |
| GAAAGCTAAAGAAAAACCAG+AGG | + | chr2.4:62497528-62497547 | MS.gene00687:CDS | 35.0% | |
| GAAGCAAAAGAAAGATGATG+AGG | + | chr2.4:62499984-62500003 | MS.gene00687:intron | 35.0% | |
| GACAGAAATTCCTTATAGCT+CGG | + | chr2.4:62499959-62499978 | MS.gene00687:intron | 35.0% | |
| GAGAACATCTTATGAAGTGA+TGG | + | chr2.4:62497747-62497766 | MS.gene00687:CDS | 35.0% | |
| GTCTGCTTAATCCTAAAAAC+AGG | + | chr2.4:62497470-62497489 | MS.gene00687:CDS | 35.0% | |
| TCTAATGACAACTCGTCAAA+AGG | + | chr2.4:62497828-62497847 | MS.gene00687:CDS | 35.0% | |
| TGTACAGAGCATAAATTCCA+AGG | - | chr2.4:62498259-62498278 | None:intergenic | 35.0% | |
| TTCTCATACTCAACAAGAAC+TGG | - | chr2.4:62497511-62497530 | None:intergenic | 35.0% | |
| ! | CATCGTAAGAGTGTGTTATT+TGG | + | chr2.4:62498524-62498543 | MS.gene00687:CDS | 35.0% |
| ! | GAGGCTTTAACAATTTAAGC+GGG | + | chr2.4:62500003-62500022 | MS.gene00687:intron | 35.0% |
| ! | GGTTTCGAATGTTGATGTTT+TGG | + | chr2.4:62499336-62499355 | MS.gene00687:CDS | 35.0% |
| ! | TCTTTCAATGCTTTTCTTCG+TGG | + | chr2.4:62498983-62499002 | MS.gene00687:CDS | 35.0% |
| ! | TGGTTTAGAATTGAAGGTTC+TGG | + | chr2.4:62498130-62498149 | MS.gene00687:intron | 35.0% |
| ! | TTTTAATGGAAGGCCTACTT+CGG | + | chr2.4:62498856-62498875 | MS.gene00687:CDS | 35.0% |
| ! | TTTTTCATGGTCTTTGCTCA+TGG | + | chr2.4:62498696-62498715 | MS.gene00687:CDS | 35.0% |
| !! | ACTGCTTTTGAAGACTTAGA+AGG | - | chr2.4:62499832-62499851 | None:intergenic | 35.0% |
| !! | CGCTTTAAAACATATTGTGC+AGG | - | chr2.4:62499565-62499584 | None:intergenic | 35.0% |
| !! | TATGCATTGGTCTTCAGTTT+GGG | + | chr2.4:62498913-62498932 | MS.gene00687:CDS | 35.0% |
| !! | TTCAAGATTTTGGAGGTCTT+AGG | + | chr2.4:62499505-62499524 | MS.gene00687:CDS | 35.0% |
| !!! | AGACATCAGCTACTTTTGAT+TGG | + | chr2.4:62498567-62498586 | MS.gene00687:CDS | 35.0% |
| !!! | CACAATATGTTTTAAAGCGG+TGG | + | chr2.4:62499566-62499585 | MS.gene00687:CDS | 35.0% |
| AATCGAACAAGTGAATGGTC+TGG | - | chr2.4:62499019-62499038 | None:intergenic | 40.0% | |
| ACCTATGATCTTTGCATAGC+TGG | - | chr2.4:62498377-62498396 | None:intergenic | 40.0% | |
| AGTCGCTTCTTTGACCTAAT+TGG | - | chr2.4:62499910-62499929 | None:intergenic | 40.0% | |
| ATCTGAGAGTGGACAATTGA+CGG | + | chr2.4:62497204-62497223 | MS.gene00687:CDS | 40.0% | |
| ATGAGGAGGACACAACAAAA+GGG | + | chr2.4:62499230-62499249 | MS.gene00687:CDS | 40.0% | |
| ATGTCGTATGTTTGAGAACC+GGG | + | chr2.4:62499462-62499481 | MS.gene00687:CDS | 40.0% | |
| ATTTATGCTCTGTACAGCCA+TGG | + | chr2.4:62498263-62498282 | MS.gene00687:intron | 40.0% | |
| ATTTCTCAACGGTGTTCTTG+AGG | + | chr2.4:62499741-62499760 | MS.gene00687:CDS | 40.0% | |
| CATGTCGTATGTTTGAGAAC+CGG | + | chr2.4:62499461-62499480 | MS.gene00687:CDS | 40.0% | |
| CTGAAATCCACCATGAATGT+TGG | + | chr2.4:62499619-62499638 | MS.gene00687:CDS | 40.0% | |
| CTGTCTATGAACCATCTGTT+GGG | + | chr2.4:62499854-62499873 | MS.gene00687:CDS | 40.0% | |
| GATTTCAGCTTATCGACAGA+CGG | - | chr2.4:62499607-62499626 | None:intergenic | 40.0% | |
| GTCTTTAGTGCCAACATTCA+TGG | - | chr2.4:62499632-62499651 | None:intergenic | 40.0% | |
| TATGAGGAGGACACAACAAA+AGG | + | chr2.4:62499229-62499248 | MS.gene00687:CDS | 40.0% | |
| TCAAACCATATACACAGACC+AGG | + | chr2.4:62498631-62498650 | MS.gene00687:CDS | 40.0% | |
| TCCAGCTATGCAAAGATCAT+AGG | + | chr2.4:62498373-62498392 | MS.gene00687:intron | 40.0% | |
| TCCATCTGCCCAAAAAATAC+TGG | - | chr2.4:62497962-62497981 | None:intergenic | 40.0% | |
| TGGTCTGTGTATATGGTTTG+AGG | - | chr2.4:62498632-62498651 | None:intergenic | 40.0% | |
| TTCATTTCAGCTGCCTTTCT+TGG | + | chr2.4:62498491-62498510 | MS.gene00687:intron | 40.0% | |
| TTGAAGAAAACCTTTCCCCA+AGG | + | chr2.4:62499368-62499387 | MS.gene00687:CDS | 40.0% | |
| TTGATATCGTTGTGCTTGAG+TGG | - | chr2.4:62499656-62499675 | None:intergenic | 40.0% | |
| TTTAGTGCCAACATTCATGG+TGG | - | chr2.4:62499629-62499648 | None:intergenic | 40.0% | |
| TTTGCTTCTTCCGAGCTATA+AGG | - | chr2.4:62499972-62499991 | None:intergenic | 40.0% | |
| ! | TCATGCTGAGTTGGACTTTA+AGG | + | chr2.4:62499081-62499100 | MS.gene00687:CDS | 40.0% |
| ! | TGAAGACTTAGAAGGCGTAA+CGG | - | chr2.4:62499824-62499843 | None:intergenic | 40.0% |
| !! | AAGATTTTGGAGGTCTTAGG+TGG | + | chr2.4:62499508-62499527 | MS.gene00687:CDS | 40.0% |
| !! | GTATGCATTGGTCTTCAGTT+TGG | + | chr2.4:62498912-62498931 | MS.gene00687:CDS | 40.0% |
| !! | TCTTATGAAGTGATGGGTCA+AGG | + | chr2.4:62497754-62497773 | MS.gene00687:CDS | 40.0% |
| AACTCGTCAAAAGGAGATGG+TGG | + | chr2.4:62497837-62497856 | MS.gene00687:CDS | 45.0% | |
| AATGAAGCTCTCTCGAAACC+AGG | + | chr2.4:62497895-62497914 | MS.gene00687:CDS | 45.0% | |
| AGCCACTTAAAGTCCGAAGT+AGG | - | chr2.4:62498872-62498891 | None:intergenic | 45.0% | |
| ATCCCAACAGTCAGCTTATG+CGG | + | chr2.4:62499131-62499150 | MS.gene00687:CDS | 45.0% | |
| CATGTCGACATAAGAAACCC+CGG | - | chr2.4:62499483-62499502 | None:intergenic | 45.0% | |
| CCTAAAAACAGGCCAACATG+TGG | + | chr2.4:62497481-62497500 | MS.gene00687:CDS | 45.0% | |
| CTCAAGTAGCACAAATGCTC+TGG | - | chr2.4:62497658-62497677 | None:intergenic | 45.0% | |
| GAAAAACCAGAGGAAAGGGT+TGG | + | chr2.4:62497538-62497557 | MS.gene00687:CDS | 45.0% | |
| GACAACTCGTCAAAAGGAGA+TGG | + | chr2.4:62497834-62497853 | MS.gene00687:CDS | 45.0% | |
| GAGGGATAATCATGCTGAGT+TGG | + | chr2.4:62499072-62499091 | MS.gene00687:CDS | 45.0% | |
| GATCTTCAAACCTTGGGGAA+AGG | - | chr2.4:62499381-62499400 | None:intergenic | 45.0% | |
| GCTGTCTATGAACCATCTGT+TGG | + | chr2.4:62499853-62499872 | MS.gene00687:CDS | 45.0% | |
| TGTCGTATGTTTGAGAACCG+GGG | + | chr2.4:62499463-62499482 | MS.gene00687:CDS | 45.0% | |
| TGTCTTCTGCAGCATCAACT+TGG | - | chr2.4:62497936-62497955 | None:intergenic | 45.0% | |
| TGTTCTTGAGGCAGGGAAAA+AGG | + | chr2.4:62499753-62499772 | MS.gene00687:CDS | 45.0% | |
| TTACAACCAACCCTTTCCTC+TGG | - | chr2.4:62497547-62497566 | None:intergenic | 45.0% | |
| ! | ACTAGCCTGGTCTGTGTATA+TGG | - | chr2.4:62498639-62498658 | None:intergenic | 45.0% |
| ! | GTGAGGTCACATTTTACAGC+TGG | + | chr2.4:62498935-62498954 | MS.gene00687:CDS | 45.0% |
| !! | ATTGGTCTTCAGTTTGGGTG+AGG | + | chr2.4:62498918-62498937 | MS.gene00687:CDS | 45.0% |
| !! | CCACATGTTGGCCTGTTTTT+AGG | - | chr2.4:62497484-62497503 | None:intergenic | 45.0% |
| !! | GAAAGGGTTGGTTGTAAAGC+TGG | + | chr2.4:62497550-62497569 | MS.gene00687:CDS | 45.0% |
| !!! | GCCAGTATTTTTTGGGCAGA+TGG | + | chr2.4:62497958-62497977 | MS.gene00687:CDS | 45.0% |
| ACTTCAACAACGCACTAGCC+TGG | - | chr2.4:62498652-62498671 | None:intergenic | 50.0% | |
| AGAACTGGACTGCCACATGT+TGG | - | chr2.4:62497496-62497515 | None:intergenic | 50.0% | |
| GACCGCATAAGCTGACTGTT+GGG | - | chr2.4:62499136-62499155 | None:intergenic | 50.0% | |
| GGCCTACTTCGGACTTTAAG+TGG | + | chr2.4:62498867-62498886 | MS.gene00687:CDS | 50.0% | |
| GGGTTGTCACAGTCGACATT+AGG | + | chr2.4:62499419-62499438 | MS.gene00687:CDS | 50.0% | |
| GGTCTTTGCTCATGGCACAT+GGG | + | chr2.4:62498704-62498723 | MS.gene00687:CDS | 50.0% | |
| TACACGTGTTTGCGCAGATG+CGG | + | chr2.4:62499705-62499724 | MS.gene00687:CDS | 50.0% | |
| TCAACGGTGTTCTTGAGGCA+GGG | + | chr2.4:62499746-62499765 | MS.gene00687:CDS | 50.0% | |
| TGGGTGATCCTATCTTGCCT+TGG | + | chr2.4:62498239-62498258 | MS.gene00687:intron | 50.0% | |
| TGGTCTTTGCTCATGGCACA+TGG | + | chr2.4:62498703-62498722 | MS.gene00687:CDS | 50.0% | |
| ! | TTTGGTGCAGTCCCAACAGA+TGG | - | chr2.4:62499868-62499887 | None:intergenic | 50.0% |
| !! | GAAGTGATGGGTCAAGGAGT+TGG | + | chr2.4:62497760-62497779 | MS.gene00687:CDS | 50.0% |
| CTCAACGGTGTTCTTGAGGC+AGG | + | chr2.4:62499745-62499764 | MS.gene00687:CDS | 55.0% | |
| GGACCGCATAAGCTGACTGT+TGG | - | chr2.4:62499137-62499156 | None:intergenic | 55.0% | |
| TGAGGCAGGGAAAAAGGCAG+AGG | + | chr2.4:62499759-62499778 | MS.gene00687:CDS | 55.0% | |
| ! | CGTCAAAAGGAGATGGTGGC+TGG | + | chr2.4:62497841-62497860 | MS.gene00687:CDS | 55.0% |
| !! | GTGATGGGTCAAGGAGTTGG+AGG | + | chr2.4:62497763-62497782 | MS.gene00687:CDS | 55.0% |
| ACGTGTTTGCGCAGATGCGG+AGG | + | chr2.4:62499708-62499727 | MS.gene00687:CDS | 60.0% | |
| GGGTCAAGGAGTTGGAGGCA+CGG | + | chr2.4:62497768-62497787 | MS.gene00687:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.4 | gene | 62497184 | 62500107 | 62497184 | ID=MS.gene00687 |
| chr2.4 | mRNA | 62497184 | 62500107 | 62497184 | ID=MS.gene00687.t1;Parent=MS.gene00687 |
| chr2.4 | exon | 62497184 | 62498066 | 62497184 | ID=MS.gene00687.t1.exon1;Parent=MS.gene00687.t1 |
| chr2.4 | CDS | 62497184 | 62498066 | 62497184 | ID=cds.MS.gene00687.t1;Parent=MS.gene00687.t1 |
| chr2.4 | exon | 62498501 | 62499914 | 62498501 | ID=MS.gene00687.t1.exon2;Parent=MS.gene00687.t1 |
| chr2.4 | CDS | 62498501 | 62499914 | 62498501 | ID=cds.MS.gene00687.t1;Parent=MS.gene00687.t1 |
| chr2.4 | exon | 62500056 | 62500107 | 62500056 | ID=MS.gene00687.t1.exon3;Parent=MS.gene00687.t1 |
| chr2.4 | CDS | 62500056 | 62500107 | 62500056 | ID=cds.MS.gene00687.t1;Parent=MS.gene00687.t1 |
| Gene Sequence |
| Protein sequence |