AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene007110

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene007110.t1 MTR_7g446520 47.710 262 90 5 13 258 32 262 1.08e-63 217
MS.gene007110.t1 MTR_7g028855 52.000 200 91 4 14 209 65 263 1.07e-54 196
MS.gene007110.t1 MTR_7g446480 62.069 116 44 0 143 258 140 255 1.24e-42 158
MS.gene007110.t1 MTR_7g446510 61.207 116 45 0 143 258 155 270 8.09e-41 153
MS.gene007110.t1 MTR_1g070355 33.829 269 160 6 1 261 9 267 5.16e-36 144
MS.gene007110.t1 MTR_5g076070 31.667 240 157 3 38 277 26 258 5.64e-34 132
MS.gene007110.t1 MTR_6g022080 30.682 176 119 2 55 228 73 247 1.48e-24 103
MS.gene007110.t1 MTR_0402s0040 31.667 180 112 3 67 242 28 200 8.44e-21 97.1
MS.gene007110.t1 MTR_8g468460 51.579 95 45 1 275 369 12 105 1.77e-20 87.8
MS.gene007110.t1 MTR_6g051425 29.319 191 132 3 73 261 25 214 5.02e-20 92.8
MS.gene007110.t1 MTR_2g098880 31.677 161 100 5 13 169 10 164 2.52e-15 77.0
MS.gene007110.t1 MTR_2g098880 31.677 161 100 5 13 169 22 176 3.88e-15 76.6
MS.gene007110.t1 MTR_0645s0010 38.000 100 57 1 261 360 31 125 6.92e-15 72.4
MS.gene007110.t1 MTR_4g035820 28.696 230 139 8 71 293 81 292 5.77e-14 76.3
MS.gene007110.t1 MTR_2g098920 37.500 104 61 2 70 173 85 184 2.58e-13 71.2
MS.gene007110.t1 MTR_6g053140 30.719 153 88 5 16 158 44 188 3.41e-13 70.1
MS.gene007110.t1 MTR_1g008290 33.333 114 71 2 134 247 18 126 3.68e-13 68.2
MS.gene007110.t1 MTR_2g101460 35.246 122 78 1 56 177 46 166 7.07e-12 66.2
MS.gene007110.t1 MTR_8g467420 40.244 82 47 2 50 130 63 143 8.13e-12 64.7
MS.gene007110.t1 MTR_2g101460 35.246 122 78 1 56 177 36 156 1.18e-11 65.1
MS.gene007110.t1 MTR_5g015480 28.571 126 82 2 67 189 58 178 1.43e-11 66.2
MS.gene007110.t1 MTR_4g067290 33.594 128 80 3 70 196 81 204 3.46e-11 65.1
MS.gene007110.t1 MTR_4g067290 33.594 128 80 3 70 196 61 184 3.49e-11 64.7
MS.gene007110.t1 MTR_4g067290 33.594 128 80 3 70 196 121 244 4.43e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene007110.t1 AT4G38180 30.943 265 160 7 16 261 8 268 2.92e-22 103
MS.gene007110.t1 AT4G38180 23.478 230 174 2 267 496 492 719 6.57e-14 76.3
MS.gene007110.t1 AT1G10240 32.961 179 111 5 71 243 54 229 1.18e-17 88.2
MS.gene007110.t1 AT1G10240 32.961 179 111 5 71 243 54 229 1.18e-17 88.2
MS.gene007110.t1 AT4G15090 28.235 255 165 9 262 508 463 707 1.70e-16 84.7
MS.gene007110.t1 AT4G15090 27.354 223 149 6 69 290 55 265 6.16e-14 76.6
MS.gene007110.t1 AT4G15090 28.235 255 165 9 262 508 463 707 1.70e-16 84.7
MS.gene007110.t1 AT4G15090 27.354 223 149 6 69 290 55 265 6.16e-14 76.6
MS.gene007110.t1 AT4G15090 28.235 255 165 9 262 508 463 707 1.70e-16 84.7
MS.gene007110.t1 AT4G15090 27.354 223 149 6 69 290 55 265 6.16e-14 76.6
MS.gene007110.t1 AT4G15090 28.235 255 165 9 262 508 463 707 1.70e-16 84.7
MS.gene007110.t1 AT4G15090 27.354 223 149 6 69 290 55 265 6.16e-14 76.6
MS.gene007110.t1 AT4G15090 28.235 255 165 9 262 508 463 707 1.70e-16 84.7
MS.gene007110.t1 AT4G15090 27.354 223 149 6 69 290 55 265 6.16e-14 76.6
MS.gene007110.t1 AT3G22170 28.191 188 126 4 262 449 472 650 2.26e-14 77.8
MS.gene007110.t1 AT3G22170 28.191 188 126 4 262 449 472 650 2.26e-14 77.8
MS.gene007110.t1 AT4G38170 28.472 144 102 1 268 411 258 400 3.11e-14 77.0
MS.gene007110.t1 AT5G18960 28.571 161 111 2 254 414 576 732 5.92e-14 76.6
MS.gene007110.t1 AT5G18960 28.571 161 111 2 254 414 576 732 5.92e-14 76.6
MS.gene007110.t1 AT3G06250 29.139 151 106 1 264 414 559 708 9.96e-14 75.9
MS.gene007110.t1 AT3G06250 29.139 151 106 1 264 414 559 708 9.96e-14 75.9
MS.gene007110.t1 AT3G06250 29.139 151 106 1 264 414 559 708 9.96e-14 75.9
MS.gene007110.t1 AT3G59470 31.288 163 107 3 12 173 16 174 2.94e-13 70.9
MS.gene007110.t1 AT3G59470 31.288 163 107 3 12 173 16 174 2.94e-13 70.9
MS.gene007110.t1 AT3G59470 31.288 163 107 3 12 173 28 186 3.45e-13 71.2
MS.gene007110.t1 AT2G27110 28.571 161 112 2 268 426 293 452 6.29e-13 73.2
MS.gene007110.t1 AT2G27110 28.571 161 112 2 268 426 438 597 6.60e-13 73.2
MS.gene007110.t1 AT2G27110 28.571 161 112 2 268 426 438 597 6.60e-13 73.2
MS.gene007110.t1 AT3G07500 38.679 106 62 2 66 171 34 136 3.23e-12 67.4
MS.gene007110.t1 AT5G28530 26.829 164 111 5 71 229 61 220 1.08e-11 68.9
MS.gene007110.t1 AT5G28530 26.829 164 111 5 71 229 61 220 1.09e-11 68.9
MS.gene007110.t1 AT5G28530 26.829 164 111 5 71 229 61 220 1.45e-11 68.6
MS.gene007110.t1 AT5G28530 26.829 164 111 5 71 229 61 220 1.58e-11 68.6
MS.gene007110.t1 AT5G28530 26.829 164 111 5 71 229 61 220 1.58e-11 68.6
MS.gene007110.t1 AT1G76320 27.891 147 102 3 264 410 402 544 3.28e-11 67.4
MS.gene007110.t1 AT1G76320 27.891 147 102 3 264 410 402 544 3.37e-11 67.4
MS.gene007110.t1 AT1G76320 27.891 147 102 3 264 410 402 544 3.37e-11 67.4
MS.gene007110.t1 AT1G76320 27.891 147 102 3 264 410 402 544 7.52e-11 66.2
MS.gene007110.t1 AT4G19990 30.986 142 88 3 306 444 454 588 9.97e-11 65.9
MS.gene007110.t1 AT4G19990 30.986 142 88 3 306 444 454 588 9.97e-11 65.9

Find 156 sgRNAs with CRISPR-Local

Find 249 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTTCTATGTATTCTATAAA+TGG 0.106117 7.3:-7572424 MS.gene007110:CDS
CCATGACTGGTTCCCATTAT+TGG 0.117147 7.3:+7573706 None:intergenic
AAAGATTTGTATAACTATTT+TGG 0.141248 7.3:-7574909 MS.gene007110:CDS
AAAGTATTCTAAACTAAAAT+TGG 0.188480 7.3:-7573545 MS.gene007110:CDS
TGATGTAATGGATGATATTT+TGG 0.190992 7.3:-7573578 MS.gene007110:CDS
CCTCCTATTCATTCTATAAA+TGG 0.204960 7.3:-7572168 MS.gene007110:CDS
ACTCTCCATCTCAAGCTTTC+TGG 0.209501 7.3:+7575128 None:intergenic
TGGTGATTACAATGAGAATT+TGG 0.226630 7.3:-7575462 MS.gene007110:CDS
GATATTATGAATCTTGATTT+TGG 0.243439 7.3:-7575386 MS.gene007110:CDS
TATCAAAACATGTCATATAA+TGG 0.255086 7.3:-7574982 MS.gene007110:CDS
TACATTTATTTCCTGCATAT+CGG 0.267468 7.3:-7575055 MS.gene007110:CDS
TGGTGCATTTGGTGTATATT+TGG 0.274057 7.3:+7572728 None:intergenic
GAATGCTAAGATTCCAATAA+TGG 0.282353 7.3:-7573719 MS.gene007110:CDS
TTTGATGAGGATGGAGATAA+TGG 0.283559 7.3:-7575542 MS.gene007110:CDS
AAAGCACCGGTTTCGTTGTT+AGG 0.291848 7.3:-7575322 MS.gene007110:CDS
ATCAAAACATGTCATATAAT+GGG 0.301079 7.3:-7574981 MS.gene007110:CDS
TTGCTTCTCTAAGCTATCTT+CGG 0.321466 7.3:-7574848 MS.gene007110:CDS
ACATTTATTTCCTGCATATC+GGG 0.352320 7.3:-7575054 MS.gene007110:CDS
GGCGAGCTGGACAATTATTC+CGG 0.353940 7.3:+7575168 None:intergenic
TGTTGTGGTTGCTGCAAAAT+AGG 0.356935 7.3:+7572644 None:intergenic
CATTTGTAGGAGGAAGTCTT+TGG 0.359447 7.3:+7572678 None:intergenic
TTCTGTTAATCTTGATCTTA+CGG 0.373575 7.3:+7573146 None:intergenic
TGCTTCTCTAAGCTATCTTC+GGG 0.374894 7.3:-7574847 MS.gene007110:CDS
AGGAAGTACTTGACTAGAAT+TGG 0.374974 7.3:+7572444 None:intergenic
TTATCAATTTGCTTTCCAAT+AGG 0.376238 7.3:+7572948 None:intergenic
GGAATGCCACGAACTACTAA+TGG 0.377492 7.3:-7572011 MS.gene007110:CDS
AATGCAGTTAACCATCCTAT+TGG 0.378186 7.3:-7572963 MS.gene007110:CDS
TTGGATTCTTGTGTAATAGA+TGG 0.384545 7.3:-7575443 MS.gene007110:CDS
TGGCCATTTATAGAATGAAT+AGG 0.387122 7.3:+7572165 None:intergenic
TGTGGTGGTTGCTGTAAAAT+AGG 0.389749 7.3:+7572135 None:intergenic
CATATTCAGCAGCATGTGAT+AGG 0.389828 7.3:-7573639 MS.gene007110:CDS
GCACTATCCAATGTATCATT+TGG 0.397797 7.3:-7572211 MS.gene007110:CDS
TCTGATCCGGTGTTGATAAC+TGG 0.398541 7.3:-7574063 MS.gene007110:CDS
GACCTTTGTTCATGACTTGT+TGG 0.399009 7.3:+7571967 None:intergenic
CATAATAGCTTGACTTTCAT+CGG 0.403705 7.3:+7572763 None:intergenic
TAGTGCATTTGGTGTACATT+TGG 0.404990 7.3:+7572484 None:intergenic
GCTGTAAAATAGGAGTAGTT+TGG 0.409130 7.3:+7572145 None:intergenic
ACAGTGTCTAAACCTCTTCA+TGG 0.409388 7.3:+7573426 None:intergenic
GGAGGAGTTTGACCATTTGT+AGG 0.411838 7.3:+7572665 None:intergenic
AATGCTAAGATTCCAATAAT+GGG 0.412224 7.3:-7573718 MS.gene007110:CDS
TGCAAAGTTGCAGCTGAAAG+TGG 0.416677 7.3:-7573613 MS.gene007110:CDS
AACACTTGACTAGGGTCAAT+AGG 0.418818 7.3:-7575214 MS.gene007110:CDS
GGCTGCACCGTTGACATCAT+AGG 0.422769 7.3:+7572505 None:intergenic
CTTTGGCTTGAATTGACAAA+AGG 0.423236 7.3:+7572695 None:intergenic
TCAGAAGGGAACAGACATAT+TGG 0.427242 7.3:-7573499 MS.gene007110:CDS
CCATTTATAGAATACATAGA+AGG 0.434699 7.3:+7572424 None:intergenic
CTGGTGCTAACCACAATGTT+AGG 0.437522 7.3:-7573393 MS.gene007110:CDS
GATACATTGGATAGTGCATT+TGG 0.439923 7.3:+7572217 None:intergenic
ATCTTTCCTAACAACGAAAC+CGG 0.440915 7.3:+7575316 None:intergenic
CAGAATGAAACAAACCATCT+TGG 0.444221 7.3:-7572279 MS.gene007110:CDS
GGTGTATATTTGGCTGCACT+TGG 0.444676 7.3:+7572738 None:intergenic
GAGGCATTGGATGGTGCATT+TGG 0.445253 7.3:+7572717 None:intergenic
CTTCTATGTATTCTATAAAT+GGG 0.447359 7.3:-7572423 MS.gene007110:CDS
AAAGTGTACCGCAGCAAAGT+TGG 0.448110 7.3:-7575293 MS.gene007110:CDS
GGTCGCACTTGAGACATCAT+AGG 0.454712 7.3:+7572249 None:intergenic
CCCGATGTTATACGATCTAA+AGG 0.458963 7.3:-7573472 MS.gene007110:CDS
GGGGTACATGGTGGCAAACA+AGG 0.461825 7.3:-7574961 MS.gene007110:CDS
AAGTGTACCGCAGCAAAGTT+GGG 0.465894 7.3:-7575292 MS.gene007110:CDS
TCCGGTGTTGATAACTGGTC+TGG 0.467260 7.3:-7574058 MS.gene007110:CDS
TAGTGCATTTGGTGTACATT+TGG 0.468787 7.3:+7572228 None:intergenic
ATCCATTCCATTCCCATGAC+TGG 0.470611 7.3:+7573693 None:intergenic
AAGTATTCTAAACTAAAATT+GGG 0.472379 7.3:-7573544 MS.gene007110:CDS
CCAATAATGGGAACCAGTCA+TGG 0.474453 7.3:-7573706 MS.gene007110:CDS
CAAGCAGTTTGATATTGAAA+AGG 0.474683 7.3:-7573750 MS.gene007110:CDS
CTAATATGATAGAGCTTGCT+AGG 0.476814 7.3:-7573669 MS.gene007110:CDS
GCGAGCTGGACAATTATTCC+GGG 0.478461 7.3:+7575169 None:intergenic
TCCTGCATATCGGGGATTGA+CGG 0.482534 7.3:-7575045 MS.gene007110:CDS
TCCGTCAATCCCCGATATGC+AGG 0.483985 7.3:+7575044 None:intergenic
GATGCATTGGATAGTGCATT+TGG 0.485433 7.3:+7572473 None:intergenic
TAAGAGTAATACCTCTGATC+CGG 0.486946 7.3:-7574076 MS.gene007110:CDS
AGACACTGTTCAAATTGTAC+TGG 0.491511 7.3:-7573412 MS.gene007110:CDS
TCTAGAGACCACGATGTCTC+TGG 0.494750 7.3:-7575482 MS.gene007110:CDS
ATAATAGCTTGACTTTCATC+GGG 0.495573 7.3:+7572764 None:intergenic
CAATTTGCTTTCCAATAGGA+TGG 0.496621 7.3:+7572952 None:intergenic
TTGATGAGGATGGAGATAAT+GGG 0.498718 7.3:-7575541 MS.gene007110:CDS
CATCATAGGTTGACTTGCAA+TGG 0.500674 7.3:+7572519 None:intergenic
TCCATCGACACCATTACGCT+TGG 0.509287 7.3:+7573363 None:intergenic
CAAAGACTTCCTCCTACAAA+TGG 0.512483 7.3:-7572677 MS.gene007110:CDS
ATGGGTATTGATATTAAAGA+TGG 0.513994 7.3:-7574879 MS.gene007110:CDS
GAATTGACAAAAGGAGGCAT+TGG 0.514641 7.3:+7572704 None:intergenic
CCGATGTTATACGATCTAAA+GGG 0.516186 7.3:-7573471 MS.gene007110:CDS
TAACGTATACGAAGGCGAGC+TGG 0.516616 7.3:+7575155 None:intergenic
GATGAGCCATTAGTAGTTCG+TGG 0.519030 7.3:+7572005 None:intergenic
CCTTTAGATCGTATAACATC+GGG 0.520619 7.3:+7573472 None:intergenic
TCATAGGTTGACTTCCAAGA+TGG 0.521243 7.3:+7572265 None:intergenic
GCAAAGTTGCAGCTGAAAGT+GGG 0.522215 7.3:-7573612 MS.gene007110:CDS
ATTGTTGGTTATTATGCAGA+TGG 0.526442 7.3:-7575591 None:intergenic
AATGAATAGGAGGAAGTACT+TGG 0.526943 7.3:+7572178 None:intergenic
ATGTGTGGTCAAAGTTATGC+AGG 0.527030 7.3:+7574136 None:intergenic
CTGGACAATTATTCCGGGTG+AGG 0.532213 7.3:+7575174 None:intergenic
ATTCTTGTGTAATAGATGGT+AGG 0.533148 7.3:-7575439 MS.gene007110:CDS
GCAGTTTGATATTGAAAAGG+TGG 0.534190 7.3:-7573747 MS.gene007110:CDS
TTCTATACTCTCTCAATGTG+TGG 0.535446 7.3:+7574121 None:intergenic
CATAATATCATCCGCCGTCA+TGG 0.536322 7.3:+7575400 None:intergenic
TAGGTTGACTTGCAATGGGA+TGG 0.540365 7.3:+7572524 None:intergenic
ACTTGACTAGAATTGGCAAA+AGG 0.540784 7.3:+7572451 None:intergenic
GAATTGGCAAAAGGATGCAT+TGG 0.541168 7.3:+7572460 None:intergenic
GAATTAGCCAAATGATACAT+TGG 0.541331 7.3:+7572204 None:intergenic
TGGCTTGAATTGACAAAAGG+AGG 0.543222 7.3:+7572698 None:intergenic
TAGGACAAAGAAATGTCTAA+AGG 0.545001 7.3:-7573192 MS.gene007110:CDS
GTTAATTGTTCATGACCAAC+TGG 0.545431 7.3:-7573953 MS.gene007110:CDS
GGCGATTTAAACAACATCCA+TGG 0.546504 7.3:-7573171 MS.gene007110:CDS
CCCAAGCGTAATGGTGTCGA+TGG 0.547288 7.3:-7573364 MS.gene007110:CDS
ATGGGAACCAGTCATGGGAA+TGG 0.547754 7.3:-7573700 MS.gene007110:CDS
TATAGAATACAAACCTGTTG+TGG 0.556476 7.3:+7572629 None:intergenic
ATGTCATATAATGGGGTACA+TGG 0.556484 7.3:-7574973 MS.gene007110:CDS
GTCAAGACACAAAATTCAGA+AGG 0.556614 7.3:-7573514 MS.gene007110:CDS
ATCATAGGTTGACTTGCAAT+GGG 0.558364 7.3:+7572520 None:intergenic
CCATCGACACCATTACGCTT+GGG 0.563477 7.3:+7573364 None:intergenic
AGGACATGTCCCAAGCGTAA+TGG 0.564262 7.3:-7573373 MS.gene007110:CDS
ACTTATCTTCAACATCCAGT+TGG 0.564933 7.3:+7573938 None:intergenic
TGGACAATTATTCCGGGTGA+GGG 0.565731 7.3:+7575175 None:intergenic
GAGAACATAGACCCCTCACC+CGG 0.567472 7.3:-7575187 MS.gene007110:CDS
AGATCAAGATTAACAGAACA+TGG 0.572591 7.3:-7573141 MS.gene007110:CDS
CCCTTTAGATCGTATAACAT+CGG 0.573562 7.3:+7573471 None:intergenic
GTGTATATTTGGCTGCACTT+GGG 0.573918 7.3:+7572739 None:intergenic
GGAGTTTGACCATTTGTAGG+AGG 0.576231 7.3:+7572668 None:intergenic
AACCAGTCATGGGAATGGAA+TGG 0.579805 7.3:-7573695 MS.gene007110:CDS
CAATAATGGGAACCAGTCAT+GGG 0.581291 7.3:-7573705 MS.gene007110:CDS
CAAGATTAACAGAACATGGA+AGG 0.582220 7.3:-7573137 MS.gene007110:CDS
CATTTATTTCCTGCATATCG+GGG 0.582815 7.3:-7575053 MS.gene007110:CDS
ATCTTGATCTTACGGAACCA+TGG 0.586359 7.3:+7573154 None:intergenic
GGTGGTTGCTGTAAAATAAG+AGG 0.588777 7.3:+7572394 None:intergenic
GGGTACATGGTGGCAAACAA+GGG 0.589509 7.3:-7574960 MS.gene007110:CDS
TGACAAAAGGAGGCATTGGA+TGG 0.591535 7.3:+7572708 None:intergenic
TGTTAAGATTAATACCATGA+CGG 0.594275 7.3:-7575414 MS.gene007110:CDS
CAAAGTTGCAGCTGAAAGTG+GGG 0.602434 7.3:-7573611 MS.gene007110:CDS
GTTGACAGTATGCAATCGTA+CGG 0.607441 7.3:-7575005 MS.gene007110:CDS
CCATTTATAGAATGAATAGG+AGG 0.608139 7.3:+7572168 None:intergenic
TACATGGTGGCAAACAAGGG+TGG 0.611316 7.3:-7574957 MS.gene007110:CDS
CTTCTCTAAGCTATCTTCGG+GGG 0.613173 7.3:-7574845 MS.gene007110:CDS
AGTTATCAACACCGGATCAG+AGG 0.615238 7.3:+7574065 None:intergenic
CGATGTTATACGATCTAAAG+GGG 0.619205 7.3:-7573470 MS.gene007110:CDS
TGTAGATTGTTTGAGTCTCG+CGG 0.625379 7.3:-7573829 MS.gene007110:CDS
CTGGATTATAACGTATACGA+AGG 0.628678 7.3:+7575147 None:intergenic
TCCAGACCAGTTATCAACAC+CGG 0.632781 7.3:+7574057 None:intergenic
TGGGACATGTCCTAACATTG+TGG 0.635268 7.3:+7573383 None:intergenic
ATAATCCAGAAAGCTTGAGA+TGG 0.638128 7.3:-7575133 MS.gene007110:CDS
GCTTCTCTAAGCTATCTTCG+GGG 0.639112 7.3:-7574846 MS.gene007110:CDS
AGAAAGCTTGAGATGGAGAG+TGG 0.639417 7.3:-7575126 MS.gene007110:CDS
AAGGGTGGATATGATGCTGT+TGG 0.642784 7.3:-7574942 MS.gene007110:CDS
GGACAATTATTCCGGGTGAG+GGG 0.643647 7.3:+7575176 None:intergenic
CTCCAACAAGTCATGAACAA+AGG 0.646798 7.3:-7571969 MS.gene007110:CDS
TATTCTAAACTAAAATTGGG+AGG 0.648453 7.3:-7573541 MS.gene007110:CDS
TATATAATACACACATGTGG+TGG 0.648699 7.3:+7572120 None:intergenic
TCAAAACATGTCATATAATG+GGG 0.649125 7.3:-7574980 MS.gene007110:CDS
TATACAATACAAACCTGTGG+TGG 0.650890 7.3:+7572376 None:intergenic
ATCGCAAATCGACAGTGATG+AGG 0.651172 7.3:-7573341 MS.gene007110:CDS
TCATATAATGGGGTACATGG+TGG 0.662255 7.3:-7574970 MS.gene007110:CDS
TTTGTTTCCCAACTTTGCTG+CGG 0.666357 7.3:+7575285 None:intergenic
AAGTCAACCTATGATGTCAA+CGG 0.669373 7.3:-7572512 MS.gene007110:CDS
ATGATAGAGCTTGCTAGGTG+TGG 0.669663 7.3:-7573664 MS.gene007110:CDS
TCAAGACACAAAATTCAGAA+GGG 0.677191 7.3:-7573513 MS.gene007110:CDS
TGTAATCACCAGAGACATCG+TGG 0.695321 7.3:+7575474 None:intergenic
TAAGATTAATACCATGACGG+CGG 0.698475 7.3:-7575411 MS.gene007110:CDS
TGTGGTTGCTGCAAAATAGG+AGG 0.703437 7.3:+7572647 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATAAATGTATATATTTTGA+TGG + chr7.3:7572475-7572494 None:intergenic 10.0%
!!! ATAAATGTATATATTTTGAT+GGG + chr7.3:7572474-7572493 None:intergenic 10.0%
!! AAAAATCAAGTAAATTGATA+TGG + chr7.3:7574634-7574653 None:intergenic 15.0%
!! AAGTATTCTAAACTAAAATT+GGG - chr7.3:7573996-7574015 MS.gene007110:CDS 15.0%
!! ATGATGATTCATTAAAAAAA+AGG + chr7.3:7574315-7574334 None:intergenic 15.0%
!! TTATATGTAAAATATGAGAA+GGG - chr7.3:7572739-7572758 MS.gene007110:CDS 15.0%
!!! AAAATTGAAAAGATTGTTTT+GGG - chr7.3:7572771-7572790 MS.gene007110:CDS 15.0%
!!! AAAGATTTGTATAACTATTT+TGG - chr7.3:7572631-7572650 MS.gene007110:intron 15.0%
!!! AAAGTATTCTAAACTAAAAT+TGG - chr7.3:7573995-7574014 MS.gene007110:CDS 15.0%
!!! TAAATGTATATATTTTGATG+GGG + chr7.3:7572473-7572492 None:intergenic 15.0%
!!! TAAATTACTATAGACAATTT+TGG + chr7.3:7574484-7574503 None:intergenic 15.0%
!!! TCATATTTTACATATAACAT+AGG + chr7.3:7572736-7572755 None:intergenic 15.0%
!!! TTTTAGTTTAGAATACTTTT+CGG + chr7.3:7573994-7574013 None:intergenic 15.0%
!! AAATAAATACAATCTTCCTT+TGG - chr7.3:7572864-7572883 MS.gene007110:intron 20.0%
!! ACAAAAATAATATGAGAACA+TGG + chr7.3:7573741-7573760 None:intergenic 20.0%
!! ACATTCTGTAAAAACATAAA+AGG + chr7.3:7574508-7574527 None:intergenic 20.0%
!! ATCAAAACATGTCATATAAT+GGG - chr7.3:7572559-7572578 MS.gene007110:intron 20.0%
!! CTTCTATGTATTCTATAAAT+GGG - chr7.3:7575117-7575136 MS.gene007110:CDS 20.0%
!! GTTATATGTAAAATATGAGA+AGG - chr7.3:7572738-7572757 MS.gene007110:CDS 20.0%
!! TATCAAAACATGTCATATAA+TGG - chr7.3:7572558-7572577 MS.gene007110:intron 20.0%
!! TATTATATAATACACACATG+TGG + chr7.3:7575426-7575445 None:intergenic 20.0%
!!! ATGTTTTTACAAAATGTGAA+GGG - chr7.3:7574689-7574708 MS.gene007110:intron 20.0%
!!! ATTCACAAACGATTATTTTT+GGG - chr7.3:7572911-7572930 MS.gene007110:intron 20.0%
!!! GAAAATTGAAAAGATTGTTT+TGG - chr7.3:7572770-7572789 MS.gene007110:CDS 20.0%
!!! GATATTATGAATCTTGATTT+TGG - chr7.3:7572154-7572173 MS.gene007110:CDS 20.0%
!!! GTATTTATTTTTCTTGTATG+TGG + chr7.3:7572854-7572873 None:intergenic 20.0%
!!! TATGTTTTTACAAAATGTGA+AGG - chr7.3:7574688-7574707 MS.gene007110:intron 20.0%
!!! TCAAATTGTTTTTGTAAATC+TGG - chr7.3:7574282-7574301 MS.gene007110:intron 20.0%
!!! TCATGATTTCAGTATTTTTT+TGG - chr7.3:7575508-7575527 MS.gene007110:CDS 20.0%
!!! TCTAACTTTTTTGAATATCT+CGG + chr7.3:7573544-7573563 None:intergenic 20.0%
!!! TGAATTACTAAAGACAATTT+TGG + chr7.3:7574662-7574681 None:intergenic 20.0%
!!! TTCTGATTTTAATTTTGATG+AGG - chr7.3:7571985-7572004 MS.gene007110:CDS 20.0%
!!! TTTTGCATACTTTTGATAAA+AGG + chr7.3:7572200-7572219 None:intergenic 20.0%
! AAACAATAGAGACATATACA+TGG - chr7.3:7572953-7572972 MS.gene007110:CDS 25.0%
! AACAATAGAGACATATACAT+GGG - chr7.3:7572954-7572973 MS.gene007110:CDS 25.0%
! AATGCTAAGATTCCAATAAT+GGG - chr7.3:7573822-7573841 MS.gene007110:CDS 25.0%
! ATACGAGAACAAGAAATTAT+GGG - chr7.3:7573266-7573285 MS.gene007110:intron 25.0%
! CAAAAATAATCGTTTGTGAA+TGG + chr7.3:7572912-7572931 None:intergenic 25.0%
! CCATTTATAGAATACATAGA+AGG + chr7.3:7575119-7575138 None:intergenic 25.0%
! CCTTCTATGTATTCTATAAA+TGG - chr7.3:7575116-7575135 MS.gene007110:CDS 25.0%
! TACATTTATTTCCTGCATAT+CGG - chr7.3:7572485-7572504 MS.gene007110:CDS 25.0%
! TATTCTAAACTAAAATTGGG+AGG - chr7.3:7573999-7574018 MS.gene007110:CDS 25.0%
! TCAAAACATGTCATATAATG+GGG - chr7.3:7572560-7572579 MS.gene007110:intron 25.0%
! TGTTAAGATTAATACCATGA+CGG - chr7.3:7572126-7572145 MS.gene007110:intron 25.0%
! TTCTGTTAATCTTGATCTTA+CGG + chr7.3:7574397-7574416 None:intergenic 25.0%
!! AATTCATTTCTAGAAGCAAT+GGG - chr7.3:7572982-7573001 MS.gene007110:CDS 25.0%
!! ATGGAAAAAGTTTTCTTCTT+TGG + chr7.3:7574098-7574117 None:intergenic 25.0%
!! CAATCTTTTCAATTTTCCAT+TGG + chr7.3:7572767-7572786 None:intergenic 25.0%
!! CATTCACAAACGATTATTTT+TGG - chr7.3:7572910-7572929 MS.gene007110:intron 25.0%
!! TTATCAATTTGCTTTCCAAT+AGG + chr7.3:7574595-7574614 None:intergenic 25.0%
!! TTTTCAATATCAAACTGCTT+GGG + chr7.3:7573791-7573810 None:intergenic 25.0%
!!! AACAATCACATAAGTTGATA+AGG + chr7.3:7574456-7574475 None:intergenic 25.0%
!!! AACTATTTTGGCAAGAAAAT+GGG - chr7.3:7572643-7572662 MS.gene007110:CDS 25.0%
!!! ATGGGTATTGATATTAAAGA+TGG - chr7.3:7572661-7572680 MS.gene007110:CDS 25.0%
!!! ATGTTTTTACAGAATGTGAA+GGG - chr7.3:7574511-7574530 MS.gene007110:intron 25.0%
!!! CATCATTTTTAACATCTTGT+AGG - chr7.3:7574329-7574348 MS.gene007110:intron 25.0%
!!! CGAAATGATTTTTTGTGTTA+TGG - chr7.3:7572808-7572827 MS.gene007110:CDS 25.0%
!!! GATTTTAATTTTGATGAGGA+TGG - chr7.3:7571989-7572008 MS.gene007110:CDS 25.0%
!!! TAACTATTTTGGCAAGAAAA+TGG - chr7.3:7572642-7572661 MS.gene007110:intron 25.0%
!!! TACTTTCGAGATAAGTTTTT+TGG - chr7.3:7573297-7573316 MS.gene007110:CDS 25.0%
!!! TATGTTTTTACAGAATGTGA+AGG - chr7.3:7574510-7574529 MS.gene007110:intron 25.0%
!!! TGATGTAATGGATGATATTT+TGG - chr7.3:7573962-7573981 MS.gene007110:CDS 25.0%
!!! TTCACAAACGATTATTTTTG+GGG - chr7.3:7572912-7572931 MS.gene007110:intron 25.0%
AAAACTCTTCAAATTCCTCT+GGG + chr7.3:7573191-7573210 None:intergenic 30.0%
AAGCAAAAAACACTTGACTA+GGG - chr7.3:7572318-7572337 MS.gene007110:intron 30.0%
ACATTTATTTCCTGCATATC+GGG - chr7.3:7572486-7572505 MS.gene007110:CDS 30.0%
AGATCAAGATTAACAGAACA+TGG - chr7.3:7574399-7574418 MS.gene007110:intron 30.0%
ATAATAGCTTGACTTTCATC+GGG + chr7.3:7574779-7574798 None:intergenic 30.0%
ATTCTTGTGTAATAGATGGT+AGG - chr7.3:7572101-7572120 MS.gene007110:intron 30.0%
CAACGAAAAATATCGAAAAG+AGG - chr7.3:7573650-7573669 MS.gene007110:CDS 30.0%
CAAGCAGTTTGATATTGAAA+AGG - chr7.3:7573790-7573809 MS.gene007110:CDS 30.0%
CAGTTTGTGTGCAATAAAAA+TGG - chr7.3:7572289-7572308 MS.gene007110:intron 30.0%
CATAATAGCTTGACTTTCAT+CGG + chr7.3:7574780-7574799 None:intergenic 30.0%
CATACGAGAACAAGAAATTA+TGG - chr7.3:7573265-7573284 MS.gene007110:intron 30.0%
CCATTTATAGAATGAATAGG+AGG + chr7.3:7575375-7575394 None:intergenic 30.0%
CCTCCTATTCATTCTATAAA+TGG - chr7.3:7575372-7575391 MS.gene007110:CDS 30.0%
GAATGCTAAGATTCCAATAA+TGG - chr7.3:7573821-7573840 MS.gene007110:CDS 30.0%
GAATTAGCCAAATGATACAT+TGG + chr7.3:7575339-7575358 None:intergenic 30.0%
TACTATACAATACAAACCTG+TGG + chr7.3:7575170-7575189 None:intergenic 30.0%
TAGGACAAAGAAATGTCTAA+AGG - chr7.3:7574348-7574367 MS.gene007110:intron 30.0%
TATAGAATACAAACCTGTTG+TGG + chr7.3:7574914-7574933 None:intergenic 30.0%
TATATAATACACACATGTGG+TGG + chr7.3:7575423-7575442 None:intergenic 30.0%
TCAAGACACAAAATTCAGAA+GGG - chr7.3:7574027-7574046 MS.gene007110:CDS 30.0%
TGGCCATTTATAGAATGAAT+AGG + chr7.3:7575378-7575397 None:intergenic 30.0%
TGGTGATTACAATGAGAATT+TGG - chr7.3:7572078-7572097 MS.gene007110:intron 30.0%
TTGGATTCTTGTGTAATAGA+TGG - chr7.3:7572097-7572116 MS.gene007110:intron 30.0%
TTTCAAGAAAGCAATGTACT+CGG - chr7.3:7573158-7573177 MS.gene007110:CDS 30.0%
! AAACTTATCTCGAAAGTATG+CGG + chr7.3:7573295-7573314 None:intergenic 30.0%
! AGAGGAATTTGAAGAGTTTT+GGG - chr7.3:7573191-7573210 MS.gene007110:CDS 30.0%
! CTTTTCAATATCAAACTGCT+TGG + chr7.3:7573792-7573811 None:intergenic 30.0%
! GAATTCATTTCTAGAAGCAA+TGG - chr7.3:7572981-7573000 MS.gene007110:CDS 30.0%
! TTTCTTGTTCTCGTATGTTT+TGG + chr7.3:7573262-7573281 None:intergenic 30.0%
!! AGAAAACTTTTTCCATGAAG+AGG - chr7.3:7574102-7574121 MS.gene007110:CDS 30.0%
!!! ATAAGTTTTTTGGTCGCATA+CGG - chr7.3:7573307-7573326 MS.gene007110:CDS 30.0%
!!! GGCATGTTTTAATGATGTAA+TGG - chr7.3:7573950-7573969 MS.gene007110:CDS 30.0%
AAACTCTTCAAATTCCTCTG+GGG + chr7.3:7573190-7573209 None:intergenic 35.0%
AAGTCAACCTATGATGTCAA+CGG - chr7.3:7575028-7575047 MS.gene007110:CDS 35.0%
AATGCAGTTAACCATCCTAT+TGG - chr7.3:7574577-7574596 MS.gene007110:intron 35.0%
ACTTATCTTCAACATCCAGT+TGG + chr7.3:7573605-7573624 None:intergenic 35.0%
ACTTGACTAGAATTGGCAAA+AGG + chr7.3:7575092-7575111 None:intergenic 35.0%
AGACACTGTTCAAATTGTAC+TGG - chr7.3:7574128-7574147 MS.gene007110:CDS 35.0%
ATAATCCAGAAAGCTTGAGA+TGG - chr7.3:7572407-7572426 MS.gene007110:CDS 35.0%
ATCTTTCCTAACAACGAAAC+CGG + chr7.3:7572227-7572246 None:intergenic 35.0%
CAAAACTCTTCAAATTCCTC+TGG + chr7.3:7573192-7573211 None:intergenic 35.0%
CAAGATTAACAGAACATGGA+AGG - chr7.3:7574403-7574422 MS.gene007110:intron 35.0%
CAGAATGAAACAAACCATCT+TGG - chr7.3:7575261-7575280 MS.gene007110:CDS 35.0%
CATTTATTTCCTGCATATCG+GGG - chr7.3:7572487-7572506 MS.gene007110:CDS 35.0%
CCCTTTAGATCGTATAACAT+CGG + chr7.3:7574072-7574091 None:intergenic 35.0%
CCGATGTTATACGATCTAAA+GGG - chr7.3:7574069-7574088 MS.gene007110:CDS 35.0%
CCTTTAGATCGTATAACATC+GGG + chr7.3:7574071-7574090 None:intergenic 35.0%
CGATGTTATACGATCTAAAG+GGG - chr7.3:7574070-7574089 MS.gene007110:CDS 35.0%
CTGGATTATAACGTATACGA+AGG + chr7.3:7572396-7572415 None:intergenic 35.0%
GAAGCAAAAAACACTTGACT+AGG - chr7.3:7572317-7572336 MS.gene007110:intron 35.0%
GATACATTGGATAGTGCATT+TGG + chr7.3:7575326-7575345 None:intergenic 35.0%
GCACTATCCAATGTATCATT+TGG - chr7.3:7575329-7575348 MS.gene007110:CDS 35.0%
GCAGTTTGATATTGAAAAGG+TGG - chr7.3:7573793-7573812 MS.gene007110:CDS 35.0%
GCTGTAAAATAGGAGTAGTT+TGG + chr7.3:7575398-7575417 None:intergenic 35.0%
GTCAAGACACAAAATTCAGA+AGG - chr7.3:7574026-7574045 MS.gene007110:CDS 35.0%
GTTAATTGTTCATGACCAAC+TGG - chr7.3:7573587-7573606 MS.gene007110:CDS 35.0%
TAAGAGTAATACCTCTGATC+CGG - chr7.3:7573464-7573483 MS.gene007110:CDS 35.0%
TAAGATTAATACCATGACGG+CGG - chr7.3:7572129-7572148 MS.gene007110:intron 35.0%
TATACAATACAAACCTGTGG+TGG + chr7.3:7575167-7575186 None:intergenic 35.0%
TGAGCTACAAGGTAACAATT+GGG - chr7.3:7573233-7573252 MS.gene007110:intron 35.0%
TTCTATACTCTCTCAATGTG+TGG + chr7.3:7573422-7573441 None:intergenic 35.0%
TTGATGAGGATGGAGATAAT+GGG - chr7.3:7571999-7572018 MS.gene007110:CDS 35.0%
TTGCTTCTCTAAGCTATCTT+CGG - chr7.3:7572692-7572711 MS.gene007110:CDS 35.0%
TTTGATGAGGATGGAGATAA+TGG - chr7.3:7571998-7572017 MS.gene007110:CDS 35.0%
! ATGTCATATAATGGGGTACA+TGG - chr7.3:7572567-7572586 MS.gene007110:intron 35.0%
! CAAAAGTATGCAAAAAGCAC+CGG - chr7.3:7572205-7572224 MS.gene007110:CDS 35.0%
! CAATTTGCTTTCCAATAGGA+TGG + chr7.3:7574591-7574610 None:intergenic 35.0%
! CAGAGGAATTTGAAGAGTTT+TGG - chr7.3:7573190-7573209 MS.gene007110:CDS 35.0%
! CTAATATGATAGAGCTTGCT+AGG - chr7.3:7573871-7573890 MS.gene007110:CDS 35.0%
! CTTCCTTTGGTAATATTCTC+TGG - chr7.3:7572877-7572896 MS.gene007110:intron 35.0%
! GGAGAGTGGTAATTTTTGAA+GGG - chr7.3:7572428-7572447 MS.gene007110:CDS 35.0%
! TCTTTTGTCTTCTTCTGCTT+CGG + chr7.3:7574553-7574572 None:intergenic 35.0%
! TGGAGAGTGGTAATTTTTGA+AGG - chr7.3:7572427-7572446 MS.gene007110:CDS 35.0%
!! AAATATGAGAAGGGTACCAA+TGG - chr7.3:7572748-7572767 MS.gene007110:CDS 35.0%
!! AATGAATAGGAGGAAGTACT+TGG + chr7.3:7575365-7575384 None:intergenic 35.0%
!! AGGAAGTACTTGACTAGAAT+TGG + chr7.3:7575099-7575118 None:intergenic 35.0%
!! ATCATAGGTTGACTTGCAAT+GGG + chr7.3:7575023-7575042 None:intergenic 35.0%
!! CTTTGGCTTGAATTGACAAA+AGG + chr7.3:7574848-7574867 None:intergenic 35.0%
!! TAGTGCATTTGGTGTACATT+TGG + chr7.3:7575059-7575078 None:intergenic 35.0%
!! TGGTGCATTTGGTGTATATT+TGG + chr7.3:7574815-7574834 None:intergenic 35.0%
!!! AAAAGATTGTTTTGGGCAGA+TGG - chr7.3:7572778-7572797 MS.gene007110:CDS 35.0%
!!! ATTTTGATGGGGTTAGTTCA+TGG + chr7.3:7572462-7572481 None:intergenic 35.0%
AACACTTGACTAGGGTCAAT+AGG - chr7.3:7572326-7572345 MS.gene007110:intron 40.0%
ACAACCAAAAGCAGTAGTGA+CGG - chr7.3:7573011-7573030 MS.gene007110:CDS 40.0%
ACACAGTCTGTGAAATGCTT+CGG + chr7.3:7573079-7573098 None:intergenic 40.0%
ACAGTGTCTAAACCTCTTCA+TGG + chr7.3:7574117-7574136 None:intergenic 40.0%
ATCTTGATCTTACGGAACCA+TGG + chr7.3:7574389-7574408 None:intergenic 40.0%
ATGTGTGGTCAAAGTTATGC+AGG + chr7.3:7573407-7573426 None:intergenic 40.0%
ATTGATTGCTTCACACTGAG+AGG + chr7.3:7573337-7573356 None:intergenic 40.0%
CAAAGACTTCCTCCTACAAA+TGG - chr7.3:7574863-7574882 MS.gene007110:CDS 40.0%
CAGCCAGAGAATATTACCAA+AGG + chr7.3:7572883-7572902 None:intergenic 40.0%
CATATTCAGCAGCATGTGAT+AGG - chr7.3:7573901-7573920 MS.gene007110:CDS 40.0%
CATTTGTAGGAGGAAGTCTT+TGG + chr7.3:7574865-7574884 None:intergenic 40.0%
CCCGATGTTATACGATCTAA+AGG - chr7.3:7574068-7574087 MS.gene007110:CDS 40.0%
CTCCAACAAGTCATGAACAA+AGG - chr7.3:7575571-7575590 MS.gene007110:CDS 40.0%
GAATTGGCAAAAGGATGCAT+TGG + chr7.3:7575083-7575102 None:intergenic 40.0%
GATGCATTGGATAGTGCATT+TGG + chr7.3:7575070-7575089 None:intergenic 40.0%
GGCGATTTAAACAACATCCA+TGG - chr7.3:7574369-7574388 MS.gene007110:intron 40.0%
GGTGGTTGCTGTAAAATAAG+AGG + chr7.3:7575149-7575168 None:intergenic 40.0%
GTGAGCTACAAGGTAACAAT+TGG - chr7.3:7573232-7573251 MS.gene007110:intron 40.0%
GTGTATATTTGGCTGCACTT+GGG + chr7.3:7574804-7574823 None:intergenic 40.0%
GTTGACAGTATGCAATCGTA+CGG - chr7.3:7572535-7572554 MS.gene007110:CDS 40.0%
TCAGAAGGGAACAGACATAT+TGG - chr7.3:7574041-7574060 MS.gene007110:CDS 40.0%
TGCTTCTCTAAGCTATCTTC+GGG - chr7.3:7572693-7572712 MS.gene007110:CDS 40.0%
TGGCTTGAATTGACAAAAGG+AGG + chr7.3:7574845-7574864 None:intergenic 40.0%
TGTAGATTGTTTGAGTCTCG+CGG - chr7.3:7573711-7573730 MS.gene007110:CDS 40.0%
TGTGGTGGTTGCTGTAAAAT+AGG + chr7.3:7575152-7575171 None:intergenic 40.0%
TGTTGTGGTTGCTGCAAAAT+AGG + chr7.3:7574899-7574918 None:intergenic 40.0%
TTTGTTTCCCAACTTTGCTG+CGG + chr7.3:7572258-7572277 None:intergenic 40.0%
! CAATAATGGGAACCAGTCAT+GGG - chr7.3:7573835-7573854 MS.gene007110:CDS 40.0%
! CTTTTGTCTTCTTCTGCTTC+GGG + chr7.3:7574552-7574571 None:intergenic 40.0%
! GAATTGACAAAAGGAGGCAT+TGG + chr7.3:7574839-7574858 None:intergenic 40.0%
! GACCTTTGTTCATGACTTGT+TGG + chr7.3:7575576-7575595 None:intergenic 40.0%
! TATTTTACAGCAACCACCAC+AGG - chr7.3:7575151-7575170 MS.gene007110:CDS 40.0%
! TATTTTGCAGCAACCACAAC+AGG - chr7.3:7574898-7574917 MS.gene007110:CDS 40.0%
! TCATAGGTTGACTTCCAAGA+TGG + chr7.3:7575278-7575297 None:intergenic 40.0%
! TCATATAATGGGGTACATGG+TGG - chr7.3:7572570-7572589 MS.gene007110:intron 40.0%
!! CATCATAGGTTGACTTGCAA+TGG + chr7.3:7575024-7575043 None:intergenic 40.0%
!!! GATTATTTTTGGGGCTGCTT+TGG - chr7.3:7572921-7572940 MS.gene007110:intron 40.0%
AAAGTGTACCGCAGCAAAGT+TGG - chr7.3:7572247-7572266 MS.gene007110:CDS 45.0%
AACCAGTCATGGGAATGGAA+TGG - chr7.3:7573845-7573864 MS.gene007110:CDS 45.0%
AAGGGTGGATATGATGCTGT+TGG - chr7.3:7572598-7572617 MS.gene007110:intron 45.0%
AAGTGTACCGCAGCAAAGTT+GGG - chr7.3:7572248-7572267 MS.gene007110:CDS 45.0%
ACTCTCCATCTCAAGCTTTC+TGG + chr7.3:7572415-7572434 None:intergenic 45.0%
AGAAAGCTTGAGATGGAGAG+TGG - chr7.3:7572414-7572433 MS.gene007110:CDS 45.0%
AGCATTCTTGTGCAAATGCC+AGG + chr7.3:7573103-7573122 None:intergenic 45.0%
AGTTATCAACACCGGATCAG+AGG + chr7.3:7573478-7573497 None:intergenic 45.0%
ATCCATTCCATTCCCATGAC+TGG + chr7.3:7573850-7573869 None:intergenic 45.0%
ATCGCAAATCGACAGTGATG+AGG - chr7.3:7574199-7574218 MS.gene007110:intron 45.0%
CAAAGTTGCAGCTGAAAGTG+GGG - chr7.3:7573929-7573948 MS.gene007110:CDS 45.0%
CACAGTCTGTGAAATGCTTC+GGG + chr7.3:7573078-7573097 None:intergenic 45.0%
CATAATATCATCCGCCGTCA+TGG + chr7.3:7572143-7572162 None:intergenic 45.0%
CTTCTCTAAGCTATCTTCGG+GGG - chr7.3:7572695-7572714 MS.gene007110:CDS 45.0%
GATGAGCCATTAGTAGTTCG+TGG + chr7.3:7575538-7575557 None:intergenic 45.0%
GCAAAGTTGCAGCTGAAAGT+GGG - chr7.3:7573928-7573947 MS.gene007110:CDS 45.0%
GCTTCTCTAAGCTATCTTCG+GGG - chr7.3:7572694-7572713 MS.gene007110:CDS 45.0%
GGAATGCCACGAACTACTAA+TGG - chr7.3:7575529-7575548 MS.gene007110:CDS 45.0%
GGAGGAGTTTGACCATTTGT+AGG + chr7.3:7574878-7574897 None:intergenic 45.0%
GGAGTTTGACCATTTGTAGG+AGG + chr7.3:7574875-7574894 None:intergenic 45.0%
GGATGGTGACATGTCTATGA+GGG - chr7.3:7573032-7573051 MS.gene007110:intron 45.0%
GGTGTATATTTGGCTGCACT+TGG + chr7.3:7574805-7574824 None:intergenic 45.0%
GTTGAGATGAGTGAGCTACA+AGG - chr7.3:7573222-7573241 MS.gene007110:intron 45.0%
TCCAGACCAGTTATCAACAC+CGG + chr7.3:7573486-7573505 None:intergenic 45.0%
TGCAAAGTTGCAGCTGAAAG+TGG - chr7.3:7573927-7573946 MS.gene007110:CDS 45.0%
TGGACAATTATTCCGGGTGA+GGG + chr7.3:7572368-7572387 None:intergenic 45.0%
TGGGACATGTCCTAACATTG+TGG + chr7.3:7574160-7574179 None:intergenic 45.0%
TGTAATCACCAGAGACATCG+TGG + chr7.3:7572069-7572088 None:intergenic 45.0%
TGTGGTTGCTGCAAAATAGG+AGG + chr7.3:7574896-7574915 None:intergenic 45.0%
! CCAATAATGGGAACCAGTCA+TGG - chr7.3:7573834-7573853 MS.gene007110:CDS 45.0%
! CCATGACTGGTTCCCATTAT+TGG + chr7.3:7573837-7573856 None:intergenic 45.0%
! CTGGTGCTAACCACAATGTT+AGG - chr7.3:7574147-7574166 MS.gene007110:CDS 45.0%
!! AAAGCACCGGTTTCGTTGTT+AGG - chr7.3:7572218-7572237 MS.gene007110:CDS 45.0%
!! ATGATAGAGCTTGCTAGGTG+TGG - chr7.3:7573876-7573895 MS.gene007110:CDS 45.0%
!! TAGGTTGACTTGCAATGGGA+TGG + chr7.3:7575019-7575038 None:intergenic 45.0%
!! TCTGATCCGGTGTTGATAAC+TGG - chr7.3:7573477-7573496 MS.gene007110:CDS 45.0%
!! TGACAAAAGGAGGCATTGGA+TGG + chr7.3:7574835-7574854 None:intergenic 45.0%
!!! GATTGTTTTGGGCAGATGGA+TGG - chr7.3:7572782-7572801 MS.gene007110:CDS 45.0%
AGGACATGTCCCAAGCGTAA+TGG - chr7.3:7574167-7574186 MS.gene007110:intron 50.0%
ATGGGAACCAGTCATGGGAA+TGG - chr7.3:7573840-7573859 MS.gene007110:CDS 50.0%
CATTTCACAGACTGTGTGCC+TGG - chr7.3:7573082-7573101 MS.gene007110:intron 50.0%
CCATCGACACCATTACGCTT+GGG + chr7.3:7574179-7574198 None:intergenic 50.0%
CGGATGGTGACATGTCTATG+AGG - chr7.3:7573031-7573050 MS.gene007110:intron 50.0%
CTGGACAATTATTCCGGGTG+AGG + chr7.3:7572369-7572388 None:intergenic 50.0%
GCGAGCTGGACAATTATTCC+GGG + chr7.3:7572374-7572393 None:intergenic 50.0%
GGACAATTATTCCGGGTGAG+GGG + chr7.3:7572367-7572386 None:intergenic 50.0%
GGCGAGCTGGACAATTATTC+CGG + chr7.3:7572375-7572394 None:intergenic 50.0%
GGGTACATGGTGGCAAACAA+GGG - chr7.3:7572580-7572599 MS.gene007110:intron 50.0%
GGTCGCACTTGAGACATCAT+AGG + chr7.3:7575294-7575313 None:intergenic 50.0%
TAACGTATACGAAGGCGAGC+TGG + chr7.3:7572388-7572407 None:intergenic 50.0%
TACATGGTGGCAAACAAGGG+TGG - chr7.3:7572583-7572602 MS.gene007110:intron 50.0%
TCCATCGACACCATTACGCT+TGG + chr7.3:7574180-7574199 None:intergenic 50.0%
TCCTGCATATCGGGGATTGA+CGG - chr7.3:7572495-7572514 MS.gene007110:CDS 50.0%
TCTAAGCTATCTTCGGGGGA+AGG - chr7.3:7572699-7572718 MS.gene007110:CDS 50.0%
TCTAGAGACCACGATGTCTC+TGG - chr7.3:7572058-7572077 MS.gene007110:intron 50.0%
! CCAAAAGCAGTAGTGACGGA+TGG - chr7.3:7573015-7573034 MS.gene007110:CDS 50.0%
! CCATCCGTCACTACTGCTTT+TGG + chr7.3:7573018-7573037 None:intergenic 50.0%
!! GAGGCATTGGATGGTGCATT+TGG + chr7.3:7574826-7574845 None:intergenic 50.0%
!! TCCGGTGTTGATAACTGGTC+TGG - chr7.3:7573482-7573501 MS.gene007110:CDS 50.0%
GAGAACATAGACCCCTCACC+CGG - chr7.3:7572353-7572372 MS.gene007110:intron 55.0%
GGCTGCACCGTTGACATCAT+AGG + chr7.3:7575038-7575057 None:intergenic 55.0%
GGGGTACATGGTGGCAAACA+AGG - chr7.3:7572579-7572598 MS.gene007110:intron 55.0%
GTACTCGGATTTCACCCCAG+AGG - chr7.3:7573173-7573192 MS.gene007110:CDS 55.0%
TCCGTCAATCCCCGATATGC+AGG + chr7.3:7572499-7572518 None:intergenic 55.0%
! CCCAAGCGTAATGGTGTCGA+TGG - chr7.3:7574176-7574195 MS.gene007110:intron 55.0%
AGCTATCTTCGGGGGAAGGC+AGG - chr7.3:7572703-7572722 MS.gene007110:CDS 60.0%
TCTTCGGGGGAAGGCAGGCT+TGG - chr7.3:7572708-7572727 MS.gene007110:CDS 65.0%


Chromosome Type Strat End Strand Name
chr7.3 gene 7571962 7575600 7571962 ID=MS.gene007110
chr7.3 mRNA 7571962 7575600 7571962 ID=MS.gene007110.t1;Parent=MS.gene007110
chr7.3 exon 7574818 7575600 7574818 ID=MS.gene007110.t1.exon1;Parent=MS.gene007110.t1
chr7.3 CDS 7574818 7575600 7574818 ID=cds.MS.gene007110.t1;Parent=MS.gene007110.t1
chr7.3 exon 7573294 7574178 7573294 ID=MS.gene007110.t1.exon2;Parent=MS.gene007110.t1
chr7.3 CDS 7573294 7574178 7573294 ID=cds.MS.gene007110.t1;Parent=MS.gene007110.t1
chr7.3 exon 7573125 7573211 7573125 ID=MS.gene007110.t1.exon3;Parent=MS.gene007110.t1
chr7.3 CDS 7573125 7573211 7573125 ID=cds.MS.gene007110.t1;Parent=MS.gene007110.t1
chr7.3 exon 7572947 7573039 7572947 ID=MS.gene007110.t1.exon4;Parent=MS.gene007110.t1
chr7.3 CDS 7572947 7573039 7572947 ID=cds.MS.gene007110.t1;Parent=MS.gene007110.t1
chr7.3 exon 7572643 7572852 7572643 ID=MS.gene007110.t1.exon5;Parent=MS.gene007110.t1
chr7.3 CDS 7572643 7572852 7572643 ID=cds.MS.gene007110.t1;Parent=MS.gene007110.t1
chr7.3 exon 7572390 7572557 7572390 ID=MS.gene007110.t1.exon6;Parent=MS.gene007110.t1
chr7.3 CDS 7572390 7572557 7572390 ID=cds.MS.gene007110.t1;Parent=MS.gene007110.t1
chr7.3 exon 7572134 7572298 7572134 ID=MS.gene007110.t1.exon7;Parent=MS.gene007110.t1
chr7.3 CDS 7572134 7572298 7572134 ID=cds.MS.gene007110.t1;Parent=MS.gene007110.t1
chr7.3 exon 7571962 7572042 7571962 ID=MS.gene007110.t1.exon8;Parent=MS.gene007110.t1
chr7.3 CDS 7571962 7572042 7571962 ID=cds.MS.gene007110.t1;Parent=MS.gene007110.t1
Gene Sequence

>MS.gene007110

ATGCAGATGGATAGCTCTGATGATTCTGATTTTAATTTTGATGAGGATGGAGATAATGGGTATTCTACTTCTAGTGAAGACGATGAAAGTATAGAGTCTAGAGACCACGATGTCTCTGGTGATTACAATGAGAATTTGGATTCTTGTGTAATAGATGGTAGGTTTGTTAAGATTAATACCATGACGGCGGATGATATTATGAATCTTGATTTTGGTAGTGAAGAAGAAGCTTATGCCTTTTATCAAAAGTATGCAAAAAGCACCGGTTTCGTTGTTAGGAAAGATAAAGTGTACCGCAGCAAAGTTGGGAAACAAATTGTAATGCGACAGTTTGTGTGCAATAAAAATGGATTAAGAAGCAAAAAACACTTGACTAGGGTCAATAGGAAAAGAGAACATAGACCCCTCACCCGGAATAATTGTCCAGCTCGCCTTCGTATACGTTATAATCCAGAAAGCTTGAGATGGAGAGTGGTAATTTTTGAAGGGTGTCATAACCATGAACTAACCCCATCAAAATATATACATTTATTTCCTGCATATCGGGGATTGACGGACGCTGATAAAGCTCAAGTTGACAGTATGCAATCGTACGGTATCAAAACATGTCATATAATGGGGTACATGGTGGCAAACAAGGGTGGATATGATGCTGTTGGTTTTACGAAGAAAGATTTGTATAACTATTTTGGCAAGAAAATGGGTATTGATATTAAAGATGGTGATGTTGTTGCTTCTCTAAGCTATCTTCGGGGGAAGGCAGGCTTGGATCCTATGTTATATGTAAAATATGAGAAGGGTACCAATGGAAAATTGAAAAGATTGTTTTGGGCAGATGGATGGAGTCGAAATGATTTTTTGTGTTATGGCGATGTTATTGCATTTGATACCACATACAAGAAAAATAAATACAATCTTCCTTTGGTAATATTCTCTGGCTGCAACAACCATTCACAAACGATTATTTTTGGGGCTGCTTTGGTTTCAGATGAAACAATAGAGACATATACATGGGTGTTGAATTCATTTCTAGAAGCAATGGGAAATCGACAACCAAAAGCAGTAGTGACGGATGGTGACATGTCTATGAGGGACGCAGTAAAAGTTGTTTTTCCCGAAGCATTTCACAGACTGTGTGCCTGGCATTTGCACAAGAATGCTTATGAAAATGTTAAAAATAAAGAATTTTTGACAAATTTCAAGAAAGCAATGTACTCGGATTTCACCCCAGAGGAATTTGAAGAGTTTTGGGCAAGTGCTGTTGAGATGAGTGAGCTACAAGGTAACAATTGGGTTTCCAAAACATACGAGAACAAGAAATTATGGGCAACCGCATACTTTCGAGATAAGTTTTTTGGTCGCATACGGACAACCTCTCAGTGTGAAGCAATCAATTCAGTAGTCAAGAAATATGTCAGAAAGAAATGCAGCATTTATGAGTTCCTGCATAACTTTGACCACACATTGAGAGAGTATAGAAACAACGAACATGTTGCTGATTTTAAGAGTAATACCTCTGATCCGGTGTTGATAACTGGTCTGGATAATATTGAGAAAGATGCTGCAAAGATTTATACATCCGAGATATTCAAAAAAGTTAGAAAACACATTGTCAAGTCTTCTGCGTTAATTGTTCATGACCAACTGGATGTTGAAGATAAGTCAATGTTTAAGTTAAGCAAAACATGCAACGAAAAATATCGAAAAGAGGTTGTATACGACACTGCAGACTCTTCTTTTCACTGTGAATGTAGATTGTTTGAGTCTCGCGGATTTCCATGTTCTCATATTATTTTTGTCATGAAAGTAGTGCACATTGATCATATCCCAAGCAGTTTGATATTGAAAAGGTGGACTAAGAATGCTAAGATTCCAATAATGGGAACCAGTCATGGGAATGGAATGGATTCTAATATGATAGAGCTTGCTAGGTGTGGTGCATATTCAGCAGCATGTGATAGGTTTTGCAAAGTTGCAGCTGAAAGTGGGGCATGTTTTAATGATGTAATGGATGATATTTTGGAGCTTACCGAAAAGTATTCTAAACTAAAATTGGGAGGTGCTGTCAAGACACAAAATTCAGAAGGGAACAGACATATTGGTGATCCCGATGTTATACGATCTAAAGGGGCTCCAAAGAAGAAAACTTTTTCCATGAAGAGGTTTAGACACTGTTCAAATTGTACTGGTGCTAACCACAATGTTAGGACATGTCCCAAGCGTAATGGTGTCGATGGATCGCAAATCGACAGTGATGAGGAATCTGAGTCAGATGCTACAAAATTTAGCAATGCAGCAGATAATATTGTAAGTGTATCTGTCAAATTGTTTTTGTAAATCTGGTGTTATACCTTTTTTTTAATGAATCATCATTTTTAACATCTTGTAGGACAAAGAAATGTCTAAAGGCGATTTAAACAACATCCATGGTTCCGTAAGATCAAGATTAACAGAACATGGAAGGCAAATTGATAAAGTGATTGAATCACTACCTTATCAACTTATGTGATTGTTATTTGCCAAAATTGTCTATAGTAATTTATCCTTTTATGTTTTTACAGAATGTGAAGGGAAGAAGTAATTCTAACCCGAAGCAGAAGAAGACAAAAGAGTTGAATGCAGTTAACCATCCTATTGGAAAGCAAATTGATAAAGTGAATAAATTATTGCCATATCAATTTACTTGATTTTTATTTGCCAAAATTGTCTTTAGTAATTCATCATTTTATGTTTTTACAAAATGTGAAGGGAGAAAGCAATTCTAATCTGAAGAAGAAGAAGAAGAAGTCAAAAGAGTTTAATGAAATTAGACATCCCGATGAAAGTCAAGCTATTATGTCCCAAGTGCAGCCAAATATACACCAAATGCACCATCCAATGCCTCCTTTTGTCAATTCAAGCCAAAGACTTCCTCCTACAAATGGTCAAACTCCTCCTATTTTGCAGCAACCACAACAGGTTTGTATTCTATAATATTACTTTGCTGTTATAATGTTAAATTTATGACAAATTTATCTAAAATTTGAAAATGTCATAATTTCAGAACGAAATAAACCATCCCATTGCAAGTCAACCTATGATGTCAACGGTGCAGCCAAATGTACACCAAATGCACTATCCAATGCATCCTTTTGCCAATTCTAGTCAAGTACTTCCTTCTATGTATTCTATAAATGGGCAAACTCCTCTTATTTTACAGCAACCACCACAGGTTTGTATTGTATAGTATATTAATGATTTTTCTGCTATTATGTTAATTTTATGACATATGTGTATGAAATTTGAAAATGTCGTCATTTCAGAATGAAACAAACCATCTTGGAAGTCAACCTATGATGTCTCAAGTGCGACCAAATGTACACCAAATGCACTATCCAATGTATCATTTGGCTAATTCAAGCCAAGTACTTCCTCCTATTCATTCTATAAATGGCCAAACTACTCCTATTTTACAGCAACCACCACATGTGTGTATTATATAATATAGCATTGCTTATGCTGTTATTATGTCATTTATATGACAAATTTATCTAAAATTTGAATATGTCATGATTTCAGTATTTTTTTGGAATGCCACGAACTACTAATGGCTCATCTTGTACTGACATGCTCCAACAAGTCATGAACAAAGGTCGTTAA
Protein sequence

>MS.gene007110.t1

MQMDSSDDSDFNFDEDGDNGYSTSSEDDESIESRDHDVSGDYNENLDSCVIDGRFVKINTMTADDIMNLDFGSEEEAYAFYQKYAKSTGFVVRKDKVYRSKVGKQIVMRQFVCNKNGLRSKKHLTRVNRKREHRPLTRNNCPARLRIRYNPESLRWRVVIFEGCHNHELTPSKYIHLFPAYRGLTDADKAQVDSMQSYGIKTCHIMGYMVANKGGYDAVGFTKKDLYNYFGKKMGIDIKDGDVVASLSYLRGKAGLDPMLYKCSIYEFLHNFDHTLREYRNNEHVADFKSNTSDPVLITGLDNIEKDAAKIYTSEIFKKVRKHIVKSSALIVHDQLDVEDKSMFKLSKTCNEKYRKEVVYDTADSSFHCECRLFESRGFPCSHIIFVMKVVHIDHIPSSLILKRWTKNAKIPIMGTSHGNGMDSNMIELARCGAYSAACDRFCKVAAESGACFNDVMDDILELTEKYSKLKLGGAVKTQNSEGNRHIGDPDVIRSKGAPKKKTFSMKRFRHCSNCTGANHNVRTCPKRNGVDGSQIDSDEESESDATKFSNAADNIDKEMSKGDLNNIHGSVRSRLTEHGRQIDKNVKGRSNSNPKQKKTKELNAVNHPIGKQIDKGESNSNLKKKKKKSKEFNEIRHPDESQAIMSQVQPNIHQMHHPMPPFVNSSQRLPPTNGQTPPILQQPQQNEINHPIASQPMMSTVQPNVHQMHYPMHPFANSSQVLPSMYSINGQTPLILQQPPQNETNHLGSQPMMSQVRPNVHQMHYPMYHLANSSQVLPPIHSINGQTTPILQQPPHYFFGMPRTTNGSSCTDMLQQVMNKGR