AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene007123

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene007123.t1 MTR_7g106320 97.001 667 13 1 1 667 1 660 0.0 1336
MS.gene007123.t1 MTR_1g057790 67.054 689 165 20 1 667 1 649 0.0 814
MS.gene007123.t1 MTR_4g051532 45.455 759 274 24 1 667 1 711 1.19e-164 489
MS.gene007123.t1 MTR_1g023050 56.146 301 97 8 153 433 146 431 5.41e-100 319
MS.gene007123.t1 MTR_3g112300 54.676 278 94 6 172 435 163 422 2.44e-92 296
MS.gene007123.t1 MTR_3g112300 54.676 278 94 6 172 435 163 422 1.35e-91 296
MS.gene007123.t1 MTR_8g078480 53.929 280 122 2 172 447 389 665 1.73e-86 289
MS.gene007123.t1 MTR_5g018860 46.061 330 156 4 172 490 339 657 4.32e-86 286
MS.gene007123.t1 MTR_8g098815 52.416 269 115 4 160 421 170 432 1.26e-80 268
MS.gene007123.t1 MTR_3g112300 52.419 248 86 6 172 405 163 392 6.33e-75 246
MS.gene007123.t1 MTR_3g112290 46.622 296 129 7 169 451 163 442 2.10e-71 238
MS.gene007123.t1 MTR_4g019450 42.675 314 137 6 175 481 200 477 4.28e-65 226
MS.gene007123.t1 MTR_7g065050 43.796 274 129 6 175 445 141 392 3.46e-62 216
MS.gene007123.t1 MTR_3g112300 49.780 227 82 6 172 384 163 371 7.84e-62 211
MS.gene007123.t1 MTR_2g095050 38.253 332 165 7 118 430 201 511 2.22e-61 216
MS.gene007123.t1 MTR_1g016490 38.519 270 132 7 172 427 244 493 1.91e-48 178
MS.gene007123.t1 MTR_7g114930 70.270 37 11 0 547 583 9 45 2.89e-12 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene007123.t1 AT2G35940 48.797 748 234 33 1 667 1 680 7.91e-170 501
MS.gene007123.t1 AT2G35940 48.797 748 234 33 1 667 1 680 7.91e-170 501
MS.gene007123.t1 AT2G35940 48.797 748 234 33 1 667 1 680 7.91e-170 501
MS.gene007123.t1 AT2G16400 52.769 307 113 5 163 455 98 386 1.02e-96 306
MS.gene007123.t1 AT4G34610 52.308 325 129 7 132 446 94 402 1.46e-92 297
MS.gene007123.t1 AT4G34610 52.308 325 129 7 132 446 94 402 1.46e-92 297
MS.gene007123.t1 AT4G34610 52.308 325 129 7 132 446 94 402 1.46e-92 297
MS.gene007123.t1 AT4G34610 52.308 325 129 7 132 446 94 402 1.46e-92 297
MS.gene007123.t1 AT1G75410 53.608 291 114 7 172 458 168 441 3.13e-92 296
MS.gene007123.t1 AT1G75410 53.608 291 114 7 172 458 168 441 3.13e-92 296
MS.gene007123.t1 AT1G19700 55.017 289 112 8 162 441 156 435 2.26e-89 289
MS.gene007123.t1 AT1G19700 55.017 289 112 8 162 441 156 435 2.26e-89 289
MS.gene007123.t1 AT1G19700 55.017 289 112 8 162 441 156 435 2.26e-89 289
MS.gene007123.t1 AT1G19700 55.017 289 112 8 162 441 156 435 2.26e-89 289
MS.gene007123.t1 AT1G19700 55.017 289 112 8 162 441 156 435 2.26e-89 289
MS.gene007123.t1 AT2G27220 51.211 289 98 7 157 442 64 312 2.70e-82 267
MS.gene007123.t1 AT2G27220 51.211 289 98 7 157 442 64 312 2.70e-82 267
MS.gene007123.t1 AT4G36870 49.502 301 124 5 170 449 310 603 2.88e-79 267
MS.gene007123.t1 AT4G36870 49.502 301 124 5 170 449 310 603 2.88e-79 267
MS.gene007123.t1 AT2G27220 48.208 307 98 8 157 442 64 330 1.97e-78 257
MS.gene007123.t1 AT2G23760 50.758 264 117 3 169 425 234 491 3.41e-76 256
MS.gene007123.t1 AT2G23760 50.758 264 117 3 169 425 234 491 3.41e-76 256
MS.gene007123.t1 AT2G23760 50.758 264 117 3 169 425 234 491 3.41e-76 256
MS.gene007123.t1 AT5G41410 44.795 317 161 5 170 472 192 508 4.70e-76 255
MS.gene007123.t1 AT1G75410 53.361 238 95 6 172 405 168 393 2.56e-73 242
MS.gene007123.t1 AT2G23760 42.405 316 117 4 169 425 234 543 3.50e-66 230
MS.gene007123.t1 AT4G36870 49.180 244 110 4 170 406 310 546 4.55e-63 219
MS.gene007123.t1 AT4G36870 48.347 242 111 4 170 404 310 544 6.17e-62 216
MS.gene007123.t1 AT1G75430 40.830 289 143 7 172 448 17 289 1.27e-60 205
MS.gene007123.t1 AT5G02030 54.595 185 75 3 253 428 234 418 3.33e-57 204
MS.gene007123.t1 AT4G32980 39.700 267 142 5 172 437 202 450 7.73e-52 186
MS.gene007123.t1 AT4G32980 39.700 267 142 5 172 437 202 450 7.73e-52 186
MS.gene007123.t1 AT2G27990 38.081 344 158 12 106 430 189 496 2.77e-51 187
MS.gene007123.t1 AT1G75430 34.177 237 107 5 172 384 17 228 3.57e-32 126
MS.gene007123.t1 AT2G27990 31.879 298 148 12 106 384 189 450 5.64e-25 108

Find 173 sgRNAs with CRISPR-Local

Find 286 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTGAGTTCAAAGTATTTA+AGG 0.159295 7.2:-7647277 MS.gene007123:CDS
TTAACATCAATGAAACTATT+AGG 0.199947 7.2:+7644016 None:intergenic
ATCTTTCAGGCAATCCTCTT+TGG 0.211678 7.2:+7644896 None:intergenic
TCTTTCAGGCAATCCTCTTT+GGG 0.217697 7.2:+7644897 None:intergenic
TATTGGAGTTTCATGGCTTT+TGG 0.219698 7.2:+7644183 None:intergenic
ACAAACTTCATTGGTGGATT+TGG 0.220206 7.2:-7643905 MS.gene007123:CDS
AACTGTGCAGCAAACCTCTT+TGG 0.253744 7.2:+7643650 None:intergenic
TAAAGCTACAAATAAGAGTT+TGG 0.254411 7.2:-7645040 MS.gene007123:CDS
TTCTTCCTAGTTGAATGTTT+TGG 0.269559 7.2:+7643753 None:intergenic
AATTCAGGATTCAGCTTCAT+TGG 0.282072 7.2:-7644109 MS.gene007123:CDS
GAGGAACTATCAATGAAATT+TGG 0.286124 7.2:-7643974 MS.gene007123:CDS
GGTCTAGAAACAGAAATTAT+TGG 0.288557 7.2:+7644166 None:intergenic
ATGAAGGAAAATGAACTAAA+TGG 0.289721 7.2:-7644325 MS.gene007123:CDS
GTATCACGCGCCGCCGTGTT+TGG 0.299903 7.2:+7647434 None:intergenic
CGCCGCCGCCACCACTTGAT+TGG 0.300629 7.2:+7647756 None:intergenic
AATTGCAACAGGTTTCAAAT+TGG 0.308221 7.2:-7644408 MS.gene007123:intron
GGAAATGTTAGAAACAATTC+AGG 0.311379 7.2:-7644124 MS.gene007123:CDS
GGTTCGCCGTCTCCGGCTTC+TGG 0.313206 7.2:-7647341 MS.gene007123:CDS
GGAGGAGATGGATCAATAAT+TGG 0.316947 7.2:-7647137 MS.gene007123:CDS
CTGTTTCTGTTCTTCGTGCT+TGG 0.318849 7.2:-7644873 MS.gene007123:CDS
CAATACCCAATTGGTGATAT+TGG 0.320766 7.2:-7643881 MS.gene007123:CDS
CAAAACAAACAGGGCTTACT+AGG 0.321411 7.2:-7644521 MS.gene007123:CDS
TAACATCAATGAAACTATTA+GGG 0.331113 7.2:+7644017 None:intergenic
CAGAAATTATTGGAGTTTCA+TGG 0.342483 7.2:+7644176 None:intergenic
ACAACGTGCTCTACAACAAT+TGG 0.343052 7.2:-7644947 MS.gene007123:CDS
ATCCACCAATGAAGTTTGTT+TGG 0.345852 7.2:+7643909 None:intergenic
GAATAATAACAATGGGAATC+CGG 0.361123 7.2:-7647309 MS.gene007123:CDS
TAGGGTTATGCATAAGTTCA+TGG 0.365082 7.2:+7644035 None:intergenic
ATTATTTAGGACACAAAATC+TGG 0.366418 7.2:+7643623 None:intergenic
ATAAGTGAACCAAATGAGTT+TGG 0.373207 7.2:-7643722 MS.gene007123:CDS
CACATGCTTGCAAAACAAAC+AGG 0.376982 7.2:-7644531 MS.gene007123:CDS
CGTCATGGTGCGCGTGGATT+TGG 0.380286 7.2:+7647519 None:intergenic
GGTGAAGAGGATTGCTTTGG+AGG 0.380432 7.2:-7645018 MS.gene007123:CDS
TGTCCTAGCTGAACCGATTC+CGG 0.381221 7.2:+7645134 None:intergenic
TTGGGTGAAGAGGATTGCTT+TGG 0.382173 7.2:-7645021 MS.gene007123:CDS
TTTATAGAACCAAACTCATT+TGG 0.385263 7.2:+7643713 None:intergenic
TGTGAATAGTGGTGTTGAAT+TGG 0.390097 7.2:-7647222 MS.gene007123:CDS
AACCTACCAATATCACCAAT+TGG 0.390271 7.2:+7643875 None:intergenic
ATTGGATCATCAGAACTAGA+AGG 0.393321 7.2:-7644091 MS.gene007123:CDS
AAAGCTACAAATAAGAGTTT+GGG 0.393739 7.2:-7645039 MS.gene007123:CDS
TGTGTGGAATTGTAACCTTT+AGG 0.394460 7.2:+7644214 None:intergenic
GAGGTAAAATTGAAGGTTCA+AGG 0.397374 7.2:-7644999 MS.gene007123:CDS
ACTGTGCAGCAAACCTCTTT+GGG 0.397435 7.2:+7643651 None:intergenic
TATCACGCGCCGCCGTGTTT+GGG 0.400157 7.2:+7647435 None:intergenic
TGGTGTTGTTGGTGGTTAAG+AGG 0.400409 7.2:+7647539 None:intergenic
TGCATAAGTTCATGGTTCCT+TGG 0.400560 7.2:+7644043 None:intergenic
GCAAGATTCGTTTCTATGTC+TGG 0.404625 7.2:-7647365 MS.gene007123:CDS
GACATAGAAACGAATCTTGC+CGG 0.407425 7.2:+7647368 None:intergenic
TAAATGCTCGAGTCAGGCTT+TGG 0.408513 7.2:-7644381 MS.gene007123:CDS
GCGCGTGGATTTGGTGTTGT+TGG 0.411629 7.2:+7647528 None:intergenic
TCTGAGTTCAAAGTATTTAA+GGG 0.411868 7.2:-7647276 MS.gene007123:CDS
GTTGAGGAAAACATAGTTAC+CGG 0.412150 7.2:+7647634 None:intergenic
GGAATGAGCAAGGTGAATAT+TGG 0.415474 7.2:-7647182 MS.gene007123:CDS
GGAAACCAAACAAACTTCAT+TGG 0.423223 7.2:-7643914 MS.gene007123:CDS
GGTTTATAAATGCTCGAGTC+AGG 0.425092 7.2:-7644387 MS.gene007123:CDS
GGGGTCTCCAAGCGTTATGC+TGG 0.431536 7.2:+7644917 None:intergenic
AGAACAGAAACAGATCTTTC+AGG 0.435978 7.2:+7644883 None:intergenic
CTTGGTCTTGATTCAATACA+AGG 0.436754 7.2:-7643800 MS.gene007123:CDS
AATAATAACAATGGGAATCC+GGG 0.437333 7.2:-7647308 MS.gene007123:CDS
TCAATAATTGGTGGTGGGGA+GGG 0.443667 7.2:-7647125 MS.gene007123:CDS
GTGAATATTGGAGAATCATC+AGG 0.448018 7.2:-7647170 MS.gene007123:CDS
TTCGAACAAGCCGCCGGAAT+CGG 0.449398 7.2:-7645147 MS.gene007123:CDS
ATTGGTGGTGGGGAGGGAAG+TGG 0.452026 7.2:-7647119 MS.gene007123:CDS
ATCAATAATTGGTGGTGGGG+AGG 0.457926 7.2:-7647126 MS.gene007123:CDS
AAACAATCTCAAAGCAGTTT+CGG 0.458580 7.2:-7645092 MS.gene007123:CDS
TGCTTTGGAGGTAAAATTGA+AGG 0.465481 7.2:-7645006 MS.gene007123:CDS
AAACCACAACCTCCATTTGA+TGG 0.467737 7.2:+7645175 None:intergenic
GTCTGGTGGTTCGCCGTCTC+CGG 0.468228 7.2:-7647348 MS.gene007123:CDS
GTGAATAGTGGTGTTGAATT+GGG 0.472967 7.2:-7647221 MS.gene007123:CDS
TGTTTGAAAGATGCAATAAC+AGG 0.474143 7.2:-7645069 MS.gene007123:CDS
CCACAATCATCACCACTTGT+TGG 0.474765 7.2:-7644145 MS.gene007123:CDS
ATGTTGATACTTTCATATTG+AGG 0.481269 7.2:+7643680 None:intergenic
CACACATGCAGTACAATCAA+TGG 0.483257 7.2:-7647469 MS.gene007123:CDS
ATGTGCTTGTCTGAATCCTT+TGG 0.484894 7.2:+7644549 None:intergenic
AATAATGTTTCACTCACTCT+TGG 0.485275 7.2:-7643818 MS.gene007123:CDS
CAACCTTCTCATGCCGCTGC+CGG 0.488739 7.2:-7647653 MS.gene007123:CDS
TCAGAATATTGTATATAGCC+TGG 0.489333 7.2:+7647701 None:intergenic
TTACAACGAATAATAACAAT+GGG 0.489888 7.2:-7647316 MS.gene007123:CDS
GACGTTGTACCTTCTTTGCA+TGG 0.491466 7.2:-7647500 MS.gene007123:CDS
AGTGGTGGCGGCGGCGCCGA+CGG 0.491733 7.2:-7647749 MS.gene007123:CDS
CCATGATAGTACGTTGCCAT+TGG 0.498403 7.2:+7647794 None:intergenic
CCACCATCAAATGGAGGTTG+TGG 0.501135 7.2:-7645178 MS.gene007123:CDS
ACCTACCAATATCACCAATT+GGG 0.505940 7.2:+7643876 None:intergenic
CAGACAGTACCACCATCAAA+TGG 0.506484 7.2:-7645187 MS.gene007123:CDS
AACAGGGCTTACTAGGAGTC+AGG 0.508298 7.2:-7644514 MS.gene007123:intron
AACCAAACAAACTTCATTGG+TGG 0.508445 7.2:-7643911 MS.gene007123:CDS
ACCTTTAGGTTCTGTTTCAG+AGG 0.511607 7.2:+7644228 None:intergenic
ACGTACATTTCTTCCACCAT+TGG 0.511797 7.2:+7644355 None:intergenic
TTTCTAACATTTCCAACAAG+TGG 0.513849 7.2:+7644133 None:intergenic
ATCCAATCAAGTGGTGGCGG+CGG 0.518066 7.2:-7647758 MS.gene007123:CDS
GAACTCAGAATCTGAATCCC+CGG 0.518621 7.2:+7647290 None:intergenic
CAACGTGCTCTACAACAATT+GGG 0.519313 7.2:-7644946 MS.gene007123:CDS
CTTTCAGGCAATCCTCTTTG+GGG 0.520504 7.2:+7644898 None:intergenic
AAATAAGAGTTTGGGTGAAG+AGG 0.522513 7.2:-7645031 MS.gene007123:CDS
GATGGATCAATAATTGGTGG+TGG 0.523887 7.2:-7647131 MS.gene007123:CDS
AATGTACGTGGAAGAAATGA+AGG 0.525935 7.2:-7644341 MS.gene007123:CDS
CGTGGATTTGGTGTTGTTGG+TGG 0.528203 7.2:+7647531 None:intergenic
GAATCATCAGGAGTTGGTAG+TGG 0.530198 7.2:-7647158 MS.gene007123:CDS
AGGTGGCGCGTGAGGTGAGA+AGG 0.530811 7.2:+7647589 None:intergenic
GGAAGGAAGCCATGCAAAGA+AGG 0.533172 7.2:+7647491 None:intergenic
TTCGTTGTAACACCAGAAGC+CGG 0.536997 7.2:+7647329 None:intergenic
CCAATGGCAACGTACTATCA+TGG 0.542137 7.2:-7647794 MS.gene007123:CDS
ACATTATTACTTGAAAACCT+TGG 0.542336 7.2:+7643833 None:intergenic
GGATTTGGACAATACCCAAT+TGG 0.542874 7.2:-7643890 MS.gene007123:CDS
GGAGTTGGTAGTGGAGGAGA+TGG 0.547177 7.2:-7647149 MS.gene007123:CDS
AAAAGTGTACTTACGGGTGG+AGG 0.547866 7.2:+7644836 None:intergenic
ACACTTGTTCTCATGAATCC+AGG 0.550346 7.2:-7647719 MS.gene007123:CDS
TCCTCGTTCGAACAAGCCGC+CGG 0.551758 7.2:-7645153 MS.gene007123:CDS
ACCCAATTGGTGATATTGGT+AGG 0.552228 7.2:-7643877 MS.gene007123:CDS
GAATGATCCAGCATAACGCT+TGG 0.554984 7.2:-7644924 MS.gene007123:CDS
TCCAACACTCAACAATTCGT+TGG 0.555631 7.2:-7647566 MS.gene007123:CDS
ACCTCTGAAACAGAACCTAA+AGG 0.555839 7.2:-7644229 MS.gene007123:CDS
TCTTAGTCTCTCTTCACAGC+CGG 0.560177 7.2:-7647387 MS.gene007123:CDS
CATTGATTGTACTGCATGTG+TGG 0.560839 7.2:+7647470 None:intergenic
TTGAGATTGTTTGTAGTGCA+AGG 0.562020 7.2:+7645103 None:intergenic
CCGCCGGAATCGGTTCAGCT+AGG 0.562168 7.2:-7645137 MS.gene007123:CDS
ATTGGAGAATCATCAGGAGT+TGG 0.562542 7.2:-7647164 MS.gene007123:CDS
TTGGGAAAGAAGAGTGGTGG+TGG 0.562954 7.2:-7647203 MS.gene007123:CDS
GAAAACATAGTTACCGGCAG+CGG 0.567137 7.2:+7647640 None:intergenic
TCATCAGGAGTTGGTAGTGG+AGG 0.567311 7.2:-7647155 MS.gene007123:CDS
GTTACAACGAATAATAACAA+TGG 0.571166 7.2:-7647317 MS.gene007123:CDS
GCCAACGAATTGTTGAGTGT+TGG 0.571349 7.2:+7647565 None:intergenic
ATGGATCAATAATTGGTGGT+GGG 0.575349 7.2:-7647130 MS.gene007123:CDS
ATGAAATACCTCATCAAGCA+TGG 0.576005 7.2:+7647028 None:intergenic
TGAGATTGTTTGTAGTGCAA+GGG 0.576129 7.2:+7645104 None:intergenic
GCACAATGAGGCAAATAATG+AGG 0.576266 7.2:-7643993 MS.gene007123:CDS
CCAAACCAAAACATTCAACT+AGG 0.579234 7.2:-7643758 MS.gene007123:CDS
GAAATCCAATCAAGTGGTGG+CGG 0.581239 7.2:-7647761 MS.gene007123:CDS
TTTCAGCAGCTGTAGAGTTG+AGG 0.581659 7.2:+7647618 None:intergenic
CATTGATGTTAAGCACAATG+AGG 0.585091 7.2:-7644005 MS.gene007123:CDS
GTTGGTTGAAGGTGGAGCAA+AGG 0.585799 7.2:-7645212 MS.gene007123:intron
GATGAGAGACAAAATAGAGA+TGG 0.586332 7.2:-7643950 MS.gene007123:CDS
TTACCGGCAGCGGCATGAGA+AGG 0.586375 7.2:+7647650 None:intergenic
TCAACATGCAAAACCCAAAG+AGG 0.590340 7.2:-7643664 MS.gene007123:CDS
AACAAGTGTTTGAAGTCCGT+CGG 0.592444 7.2:+7647733 None:intergenic
TTGGATCATCAGAACTAGAA+GGG 0.594241 7.2:-7644090 MS.gene007123:CDS
AGTCAGGCTTTGGAAGCCAA+TGG 0.594390 7.2:-7644371 MS.gene007123:CDS
GAGTGGTGGTGGAATGAGCA+AGG 0.594607 7.2:-7647192 MS.gene007123:CDS
GCTAATTACCATGCTTGATG+AGG 0.595737 7.2:-7647036 MS.gene007123:intron
GTACAACGTCATGGTGCGCG+TGG 0.595803 7.2:+7647513 None:intergenic
GACAGTCCTTGTTGAGCGCG+TGG 0.597975 7.2:+7647410 None:intergenic
GATTGTACTGCATGTGTGGA+AGG 0.599960 7.2:+7647474 None:intergenic
CCAACAAGTGGTGATGATTG+TGG 0.604006 7.2:+7644145 None:intergenic
AAATGAACTAAATGGATCTG+AGG 0.605958 7.2:-7644317 MS.gene007123:CDS
TGGATCAATAATTGGTGGTG+GGG 0.613381 7.2:-7647129 MS.gene007123:CDS
GATACTTTCATATTGAGGAG+AGG 0.614077 7.2:+7643685 None:intergenic
AATTCTGAAATCCAATCAAG+TGG 0.614202 7.2:-7647767 MS.gene007123:CDS
AGATTCGTTTCTATGTCTGG+TGG 0.614647 7.2:-7647362 MS.gene007123:CDS
GAACACAATTGACCCAAACA+CGG 0.622706 7.2:-7647447 MS.gene007123:CDS
AATTGTTGAGTGTTGGAAGG+TGG 0.623899 7.2:+7647572 None:intergenic
GCAAAGAAGGTACAACGTCA+TGG 0.625334 7.2:+7647504 None:intergenic
GATACACCACGCGCTCAACA+AGG 0.625868 7.2:-7647416 MS.gene007123:CDS
CAGGCTTTGGAAGCCAATGG+TGG 0.629052 7.2:-7644368 MS.gene007123:CDS
GAGGTTGTGAATGTGAATAG+TGG 0.635951 7.2:-7647233 MS.gene007123:CDS
ACGAATTGTTGAGTGTTGGA+AGG 0.639184 7.2:+7647569 None:intergenic
GTAACACCAGAAGCCGGAGA+CGG 0.643060 7.2:+7647335 None:intergenic
GTGTTGGAAGGTGGCGCGTG+AGG 0.647584 7.2:+7647581 None:intergenic
ATAATAACAATGGGAATCCG+GGG 0.647699 7.2:-7647307 MS.gene007123:CDS
CCACAACCTCCATTTGATGG+TGG 0.650106 7.2:+7645178 None:intergenic
TCCGGCGGCTTGTTCGAACG+AGG 0.652183 7.2:+7645152 None:intergenic
ACATGCTTGCAAAACAAACA+GGG 0.653038 7.2:-7644530 MS.gene007123:CDS
ACTCAGAACAATTCACACCA+AGG 0.656664 7.2:-7643850 MS.gene007123:CDS
TCTGAAATCCAATCAAGTGG+TGG 0.660822 7.2:-7647764 MS.gene007123:CDS
GTTGAATTGGGAAAGAAGAG+TGG 0.679581 7.2:-7647209 MS.gene007123:CDS
GGAGATGGATCAATAATTGG+TGG 0.682848 7.2:-7647134 MS.gene007123:CDS
AACGCTTGGAGACCCCAAAG+AGG 0.685460 7.2:-7644910 MS.gene007123:CDS
GAACTAGAAGGGATACCACA+AGG 0.698540 7.2:-7644079 MS.gene007123:CDS
GAATTGGGAAAGAAGAGTGG+TGG 0.708823 7.2:-7647206 MS.gene007123:CDS
ACAGTACCACCATCAAATGG+AGG 0.710282 7.2:-7645184 MS.gene007123:CDS
CACAATTGACCCAAACACGG+CGG 0.712861 7.2:-7647444 MS.gene007123:CDS
CCTAGCTGAACCGATTCCGG+CGG 0.726597 7.2:+7645137 None:intergenic
ATGGCAACGTACTATCATGG+TGG 0.734896 7.2:-7647791 MS.gene007123:CDS
AATGGTGGAAGAAATGTACG+TGG 0.752334 7.2:-7644353 MS.gene007123:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAATTAATTAAATTTTTAT+AGG - chr7.2:7644663-7644682 MS.gene007123:intron 0.0%
!! AAAATGTAATTATAAAAATG+AGG + chr7.2:7646121-7646140 None:intergenic 10.0%
!! TAAAATATTGAAATGATTTA+TGG + chr7.2:7645992-7646011 None:intergenic 10.0%
!!! AAAAGTTTAGTATAATTTTT+TGG - chr7.2:7644575-7644594 MS.gene007123:intron 10.0%
!!! ACTTTTATAATGAATTAAAA+TGG + chr7.2:7644601-7644620 None:intergenic 10.0%
!!! TAATTACATTTTGAAATTAA+CGG - chr7.2:7646129-7646148 MS.gene007123:intron 10.0%
!!! TTAACAATTTTTTTTTTAAC+TGG - chr7.2:7644920-7644939 MS.gene007123:CDS 10.0%
!! TGTGATAAAATATTAATGTA+AGG + chr7.2:7645103-7645122 None:intergenic 15.0%
!! TGTTTATGATATATACTATT+TGG - chr7.2:7645480-7645499 MS.gene007123:intron 15.0%
!!! AATACAATCTTTTAAAGTAA+AGG - chr7.2:7645774-7645793 MS.gene007123:intron 15.0%
!!! GTAATCAATCAATATAATTT+TGG - chr7.2:7646927-7646946 MS.gene007123:intron 15.0%
!! ACTAAAATGAATTTACTTGT+TGG - chr7.2:7646189-7646208 MS.gene007123:intron 20.0%
!! ATAGCAATAAATGACATAAA+TGG - chr7.2:7645750-7645769 MS.gene007123:intron 20.0%
!! ATATATCATAAACACCAAAT+AGG + chr7.2:7645474-7645493 None:intergenic 20.0%
!! ATTTGAATATGCCAAAAATA+AGG + chr7.2:7646965-7646984 None:intergenic 20.0%
!! CATCAAGGTTAAATTATAAA+TGG + chr7.2:7645197-7645216 None:intergenic 20.0%
!! TAACATCAATGAAACTATTA+GGG + chr7.2:7647405-7647424 None:intergenic 20.0%
!! TTAACATCAATGAAACTATT+AGG + chr7.2:7647406-7647425 None:intergenic 20.0%
!! TTACAACGAATAATAACAAT+GGG - chr7.2:7644103-7644122 MS.gene007123:CDS 20.0%
!! TTTCAATAAAACTAATTGCA+TGG - chr7.2:7646016-7646035 MS.gene007123:intron 20.0%
!!! AAATTAGAAAAGTGTACTTA+CGG + chr7.2:7646593-7646612 None:intergenic 20.0%
!!! AATAGTGAATTTTCATTAGA+TGG + chr7.2:7646088-7646107 None:intergenic 20.0%
!!! ACAATTTCTTTCCTTATTTT+TGG - chr7.2:7646951-7646970 MS.gene007123:intron 20.0%
!!! GAGTCATTTAGTAAATTTTT+TGG - chr7.2:7645526-7645545 MS.gene007123:intron 20.0%
!!! TAATATTTTATCACAGTCAA+TGG - chr7.2:7645108-7645127 MS.gene007123:CDS 20.0%
!!! TATTTTCTCTAACACTTTAT+TGG + chr7.2:7646664-7646683 None:intergenic 20.0%
! AAAAACTACTCTTGTACTTA+AGG - chr7.2:7644988-7645007 MS.gene007123:CDS 25.0%
! AAAGCTACAAATAAGAGTTT+GGG - chr7.2:7646380-7646399 MS.gene007123:intron 25.0%
! ACATTATTACTTGAAAACCT+TGG + chr7.2:7647589-7647608 None:intergenic 25.0%
! ACTTATAACTCAACATGATT+TGG - chr7.2:7645047-7645066 MS.gene007123:CDS 25.0%
! ACTTATTGATACCAAATCTA+AGG - chr7.2:7645412-7645431 MS.gene007123:intron 25.0%
! ATGAAGGAAAATGAACTAAA+TGG - chr7.2:7647094-7647113 MS.gene007123:CDS 25.0%
! ATGTTGATACTTTCATATTG+AGG + chr7.2:7647742-7647761 None:intergenic 25.0%
! GTTACAACGAATAATAACAA+TGG - chr7.2:7644102-7644121 MS.gene007123:CDS 25.0%
! TAAAGCTACAAATAAGAGTT+TGG - chr7.2:7646379-7646398 MS.gene007123:intron 25.0%
! TAATCAATATCACATTCTTC+CGG + chr7.2:7645559-7645578 None:intergenic 25.0%
! TTTATAGAACCAAACTCATT+TGG + chr7.2:7647709-7647728 None:intergenic 25.0%
!! AATTAGAAAAGTGTACTTAC+GGG + chr7.2:7646592-7646611 None:intergenic 25.0%
!! TCTGAGTTCAAAGTATTTAA+GGG - chr7.2:7644143-7644162 MS.gene007123:CDS 25.0%
!! TTCTGAGTTCAAAGTATTTA+AGG - chr7.2:7644142-7644161 MS.gene007123:CDS 25.0%
!!! AATTTTGTTTGAATTGCAAC+AGG - chr7.2:7647000-7647019 MS.gene007123:intron 25.0%
!!! ATTAGGAATAGTTATTTCTC+TGG - chr7.2:7645352-7645371 MS.gene007123:intron 25.0%
!!! TAAATTTTTTGGTGTTAGAC+CGG - chr7.2:7645537-7645556 MS.gene007123:intron 25.0%
!!! TCAATTTTTAGCTTGAAACT+TGG - chr7.2:7645658-7645677 MS.gene007123:intron 25.0%
!!! TTAGTCTTAGGTTTCTAATT+AGG - chr7.2:7645335-7645354 MS.gene007123:intron 25.0%
!!! TTTAACTTTTTATCTCTACG+TGG - chr7.2:7644732-7644751 MS.gene007123:intron 25.0%
AAACAATCTCAAAGCAGTTT+CGG - chr7.2:7646327-7646346 MS.gene007123:intron 30.0%
AAATGAACTAAATGGATCTG+AGG - chr7.2:7647102-7647121 MS.gene007123:CDS 30.0%
AAGACTAATATACCCAACAA+TGG + chr7.2:7645323-7645342 None:intergenic 30.0%
AATAATAACAATGGGAATCC+GGG - chr7.2:7644111-7644130 MS.gene007123:CDS 30.0%
AATAATGTTTCACTCACTCT+TGG - chr7.2:7647601-7647620 MS.gene007123:CDS 30.0%
AATGATAGAAAAACTGTGAG+TGG + chr7.2:7644861-7644880 None:intergenic 30.0%
AATTGCAACAGGTTTCAAAT+TGG - chr7.2:7647011-7647030 MS.gene007123:intron 30.0%
ATAAGTGAACCAAATGAGTT+TGG - chr7.2:7647697-7647716 MS.gene007123:CDS 30.0%
ATCAAGAAGGTAGTCTAAAT+GGG + chr7.2:7645222-7645241 None:intergenic 30.0%
ATTTAGACTACCTTCTTGAT+AGG - chr7.2:7645222-7645241 MS.gene007123:intron 30.0%
ATTTATACATCTTGAGCACT+TGG + chr7.2:7646765-7646784 None:intergenic 30.0%
CAGAAATTATTGGAGTTTCA+TGG + chr7.2:7647246-7647265 None:intergenic 30.0%
CATATACTGGTATTATTGCT+AGG - chr7.2:7645165-7645184 MS.gene007123:CDS 30.0%
CCCTATTTGTATTAATCACA+CGG - chr7.2:7645702-7645721 MS.gene007123:intron 30.0%
CCGTGTGATTAATACAAATA+GGG + chr7.2:7645705-7645724 None:intergenic 30.0%
CCTATTTGTATTAATCACAC+GGG - chr7.2:7645703-7645722 MS.gene007123:intron 30.0%
CTATCATTCGAGTATTTAAG+CGG - chr7.2:7644873-7644892 MS.gene007123:CDS 30.0%
CTTGAAACTTGGATATACAT+AGG - chr7.2:7645669-7645688 MS.gene007123:intron 30.0%
GAATAATAACAATGGGAATC+CGG - chr7.2:7644110-7644129 MS.gene007123:CDS 30.0%
GAGGAACTATCAATGAAATT+TGG - chr7.2:7647445-7647464 MS.gene007123:CDS 30.0%
GCTATTCCTTGCAATTTATA+AGG + chr7.2:7645146-7645165 None:intergenic 30.0%
GGAAATGTTAGAAACAATTC+AGG - chr7.2:7647295-7647314 MS.gene007123:CDS 30.0%
GGTCTAGAAACAGAAATTAT+TGG + chr7.2:7647256-7647275 None:intergenic 30.0%
TACTCTTGTACTTAAGGAAA+GGG - chr7.2:7644994-7645013 MS.gene007123:CDS 30.0%
TATCAAGAAGGTAGTCTAAA+TGG + chr7.2:7645223-7645242 None:intergenic 30.0%
TCAGAATATTGTATATAGCC+TGG + chr7.2:7643721-7643740 None:intergenic 30.0%
TGTTTGAAAGATGCAATAAC+AGG - chr7.2:7646350-7646369 MS.gene007123:intron 30.0%
TTTCTAACATTTCCAACAAG+TGG + chr7.2:7647289-7647308 None:intergenic 30.0%
! ACTCTAAAGAAAGGTTTGTT+AGG - chr7.2:7645283-7645302 MS.gene007123:intron 30.0%
! AGAGATGGTTACTCTTTTAT+GGG - chr7.2:7647484-7647503 MS.gene007123:CDS 30.0%
! CTTAAGTTACACCTTTTCAA+AGG + chr7.2:7645859-7645878 None:intergenic 30.0%
! TAGAGATGGTTACTCTTTTA+TGG - chr7.2:7647483-7647502 MS.gene007123:CDS 30.0%
! TCTTCACTTTCATGTGATTT+TGG - chr7.2:7644420-7644439 MS.gene007123:intron 30.0%
! TGAATTTACTTGTTGGTTGA+AGG - chr7.2:7646196-7646215 MS.gene007123:intron 30.0%
! TTCTTCCTAGTTGAATGTTT+TGG + chr7.2:7647669-7647688 None:intergenic 30.0%
! TTTAGAGTATCTCTAGCTAA+TGG + chr7.2:7645271-7645290 None:intergenic 30.0%
!! AATTCTGAAATCCAATCAAG+TGG - chr7.2:7643652-7643671 MS.gene007123:CDS 30.0%
!! ATTTGTTTTCAGCTATCCAA+AGG - chr7.2:7646854-7646873 MS.gene007123:intron 30.0%
!! CTCTAAAGAAAGGTTTGTTA+GGG - chr7.2:7645284-7645303 MS.gene007123:intron 30.0%
!! GTTGAGTTTTTCCTTTAGAA+AGG + chr7.2:7645078-7645097 None:intergenic 30.0%
!! TAACTCAACATGATTTGGTT+TGG - chr7.2:7645052-7645071 MS.gene007123:CDS 30.0%
!! TTGTTGGGTATATTAGTCTT+AGG - chr7.2:7645323-7645342 MS.gene007123:intron 30.0%
!!! CAAGAGTAGTTTTTTTTCCA+AGG + chr7.2:7644982-7645001 None:intergenic 30.0%
!!! GAGAATTGTTTTTGCTAAAG+TGG - chr7.2:7644754-7644773 MS.gene007123:intron 30.0%
!!! TTTTTTCCAAGGTGTTGAAT+TGG + chr7.2:7644971-7644990 None:intergenic 30.0%
AAATAAGAGTTTGGGTGAAG+AGG - chr7.2:7646388-7646407 MS.gene007123:intron 35.0%
AACCAAACAAACTTCATTGG+TGG - chr7.2:7647508-7647527 MS.gene007123:CDS 35.0%
AACCTACCAATATCACCAAT+TGG + chr7.2:7647547-7647566 None:intergenic 35.0%
AAGGAAGTCCTAAAAAACCA+AGG - chr7.2:7647359-7647378 MS.gene007123:CDS 35.0%
AATATACCCAACAATGGAGA+TGG + chr7.2:7645317-7645336 None:intergenic 35.0%
AATGTACGTGGAAGAAATGA+AGG - chr7.2:7647078-7647097 MS.gene007123:CDS 35.0%
AATGTGCACAAACCAAATTG+AGG - chr7.2:7645587-7645606 MS.gene007123:intron 35.0%
AATTCAGGATTCAGCTTCAT+TGG - chr7.2:7647310-7647329 MS.gene007123:CDS 35.0%
ACATGCTTGCAAAACAAACA+GGG - chr7.2:7646889-7646908 MS.gene007123:intron 35.0%
ACCTACCAATATCACCAATT+GGG + chr7.2:7647546-7647565 None:intergenic 35.0%
ACTCTTGTACTTAAGGAAAG+GGG - chr7.2:7644995-7645014 MS.gene007123:CDS 35.0%
AGAACAGAAACAGATCTTTC+AGG + chr7.2:7646539-7646558 None:intergenic 35.0%
ATAATAACAATGGGAATCCG+GGG - chr7.2:7644112-7644131 MS.gene007123:CDS 35.0%
ATATACTATTTGGACGTGCA+TGG - chr7.2:7645490-7645509 MS.gene007123:intron 35.0%
ATGAAATACCTCATCAAGCA+TGG + chr7.2:7644394-7644413 None:intergenic 35.0%
ATTGGATCATCAGAACTAGA+AGG - chr7.2:7647328-7647347 MS.gene007123:CDS 35.0%
CACTTCAAAGTTATGAAGCA+CGG - chr7.2:7646618-7646637 MS.gene007123:intron 35.0%
CATTGATGTTAAGCACAATG+AGG - chr7.2:7647414-7647433 MS.gene007123:CDS 35.0%
CCAAACCAAAACATTCAACT+AGG - chr7.2:7647661-7647680 MS.gene007123:CDS 35.0%
CCCGTGTGATTAATACAAAT+AGG + chr7.2:7645706-7645725 None:intergenic 35.0%
CTACTCTTGTACTTAAGGAA+AGG - chr7.2:7644993-7645012 MS.gene007123:CDS 35.0%
GAGGTAAAATTGAAGGTTCA+AGG - chr7.2:7646420-7646439 MS.gene007123:intron 35.0%
GATACTTTCATATTGAGGAG+AGG + chr7.2:7647737-7647756 None:intergenic 35.0%
GATGAGAGACAAAATAGAGA+TGG - chr7.2:7647469-7647488 MS.gene007123:CDS 35.0%
GCTCAAGATGTATAAATGCT+CGG - chr7.2:7646768-7646787 MS.gene007123:intron 35.0%
GGAAACCAAACAAACTTCAT+TGG - chr7.2:7647505-7647524 MS.gene007123:CDS 35.0%
GTGAATATTGGAGAATCATC+AGG - chr7.2:7644249-7644268 MS.gene007123:CDS 35.0%
GTTGAGGAAAACATAGTTAC+CGG + chr7.2:7643788-7643807 None:intergenic 35.0%
TAATGGCAGAGGTGATTAAA+TGG + chr7.2:7645254-7645273 None:intergenic 35.0%
TACTAGAGAGAAGAGAAAGT+TGG + chr7.2:7645448-7645467 None:intergenic 35.0%
TACTGGTATTATTGCTAGGT+AGG - chr7.2:7645169-7645188 MS.gene007123:CDS 35.0%
TAGGGTTATGCATAAGTTCA+TGG + chr7.2:7647387-7647406 None:intergenic 35.0%
TAGTCTAAATGGGTACATCA+AGG + chr7.2:7645212-7645231 None:intergenic 35.0%
TGAGATTGTTTGTAGTGCAA+GGG + chr7.2:7646318-7646337 None:intergenic 35.0%
TGAGCTAGCTCCAAATTAAT+GGG + chr7.2:7645381-7645400 None:intergenic 35.0%
TGTGTGGAATTGTAACCTTT+AGG + chr7.2:7647208-7647227 None:intergenic 35.0%
TTGAGATTGTTTGTAGTGCA+AGG + chr7.2:7646319-7646338 None:intergenic 35.0%
TTGCAAGGAATAGCATATAC+TGG - chr7.2:7645152-7645171 MS.gene007123:CDS 35.0%
TTGGATCATCAGAACTAGAA+GGG - chr7.2:7647329-7647348 MS.gene007123:CDS 35.0%
! ATACCAAATCTAAGGTCTAG+AGG - chr7.2:7645420-7645439 MS.gene007123:intron 35.0%
! ATCCACCAATGAAGTTTGTT+TGG + chr7.2:7647513-7647532 None:intergenic 35.0%
! ATGGATCAATAATTGGTGGT+GGG - chr7.2:7644289-7644308 MS.gene007123:CDS 35.0%
! ATGTTCAACAAGTGTTGTGT+TGG + chr7.2:7646733-7646752 None:intergenic 35.0%
! ATTTACTTGTTGGTTGAAGG+TGG - chr7.2:7646199-7646218 MS.gene007123:intron 35.0%
! CAATACCCAATTGGTGATAT+TGG - chr7.2:7647538-7647557 MS.gene007123:CDS 35.0%
! CTTACTCTTGTCCTTTGAAA+AGG - chr7.2:7645845-7645864 MS.gene007123:intron 35.0%
! CTTTTCAAAGGACAAGAGTA+AGG + chr7.2:7645847-7645866 None:intergenic 35.0%
! GCTAGAGATACTCTAAAGAA+AGG - chr7.2:7645274-7645293 MS.gene007123:intron 35.0%
! GTGAATAGTGGTGTTGAATT+GGG - chr7.2:7644198-7644217 MS.gene007123:CDS 35.0%
! TATTGGAGTTTCATGGCTTT+TGG + chr7.2:7647239-7647258 None:intergenic 35.0%
! TGTGAATAGTGGTGTTGAAT+TGG - chr7.2:7644197-7644216 MS.gene007123:CDS 35.0%
!! ACAAACTTCATTGGTGGATT+TGG - chr7.2:7647514-7647533 MS.gene007123:CDS 35.0%
!! ATTTGGTTTGGCCTTTCTAA+AGG - chr7.2:7645064-7645083 MS.gene007123:CDS 35.0%
!! CTCGGAGTCTTTAAAATCTT+CGG - chr7.2:7646786-7646805 MS.gene007123:intron 35.0%
!! TGCTTTGGAGGTAAAATTGA+AGG - chr7.2:7646413-7646432 MS.gene007123:intron 35.0%
!!! CCTAGTTGAATGTTTTGGTT+TGG + chr7.2:7647664-7647683 None:intergenic 35.0%
!!! TCATGGTTCCTTGGTTTTTT+AGG + chr7.2:7647370-7647389 None:intergenic 35.0%
AAACCACAACCTCCATTTGA+TGG + chr7.2:7646247-7646266 None:intergenic 40.0%
ACAACGTGCTCTACAACAAT+TGG - chr7.2:7646472-7646491 MS.gene007123:intron 40.0%
ACACTTGTTCTCATGAATCC+AGG - chr7.2:7643700-7643719 MS.gene007123:CDS 40.0%
ACGTACATTTCTTCCACCAT+TGG + chr7.2:7647067-7647086 None:intergenic 40.0%
ACTCAGAACAATTCACACCA+AGG - chr7.2:7647569-7647588 MS.gene007123:CDS 40.0%
AGATTCGTTTCTATGTCTGG+TGG - chr7.2:7644057-7644076 MS.gene007123:CDS 40.0%
ATCTTTCAGGCAATCCTCTT+TGG + chr7.2:7646526-7646545 None:intergenic 40.0%
ATGCTTTCTGAGCCTCAATT+TGG + chr7.2:7645602-7645621 None:intergenic 40.0%
ATGTGCTTGTCTGAATCCTT+TGG + chr7.2:7646873-7646892 None:intergenic 40.0%
ATTGGAGAATCATCAGGAGT+TGG - chr7.2:7644255-7644274 MS.gene007123:CDS 40.0%
CAAAACAAACAGGGCTTACT+AGG - chr7.2:7646898-7646917 MS.gene007123:intron 40.0%
CAACGTGCTCTACAACAATT+GGG - chr7.2:7646473-7646492 MS.gene007123:intron 40.0%
CACACATGCAGTACAATCAA+TGG - chr7.2:7643950-7643969 MS.gene007123:CDS 40.0%
CACATGCTTGCAAAACAAAC+AGG - chr7.2:7646888-7646907 MS.gene007123:intron 40.0%
CGTGGACCTTATAAATTGCA+AGG - chr7.2:7645137-7645156 MS.gene007123:CDS 40.0%
CTCTTGTACTTAAGGAAAGG+GGG - chr7.2:7644996-7645015 MS.gene007123:CDS 40.0%
GAAAGGGGGTTATGATAATC+TGG - chr7.2:7645010-7645029 MS.gene007123:CDS 40.0%
GAACACAATTGACCCAAACA+CGG - chr7.2:7643972-7643991 MS.gene007123:CDS 40.0%
GACATAGAAACGAATCTTGC+CGG + chr7.2:7644054-7644073 None:intergenic 40.0%
GAGCTAGCTCCAAATTAATG+GGG + chr7.2:7645380-7645399 None:intergenic 40.0%
GAGGTTGTGAATGTGAATAG+TGG - chr7.2:7644186-7644205 MS.gene007123:CDS 40.0%
GATAGAAAAACTGTGAGTGG+TGG + chr7.2:7644858-7644877 None:intergenic 40.0%
GATGGATCAATAATTGGTGG+TGG - chr7.2:7644288-7644307 MS.gene007123:CDS 40.0%
GCAAGATTCGTTTCTATGTC+TGG - chr7.2:7644054-7644073 MS.gene007123:CDS 40.0%
GCACAATGAGGCAAATAATG+AGG - chr7.2:7647426-7647445 MS.gene007123:CDS 40.0%
GCTAATTACCATGCTTGATG+AGG - chr7.2:7644383-7644402 MS.gene007123:CDS 40.0%
GGAATGAGCAAGGTGAATAT+TGG - chr7.2:7644237-7644256 MS.gene007123:CDS 40.0%
GGAGATGGATCAATAATTGG+TGG - chr7.2:7644285-7644304 MS.gene007123:CDS 40.0%
GGAGGAGATGGATCAATAAT+TGG - chr7.2:7644282-7644301 MS.gene007123:CDS 40.0%
GGATTTGGACAATACCCAAT+TGG - chr7.2:7647529-7647548 MS.gene007123:CDS 40.0%
GGCTTAGAGTCAACAATAGA+GGG - chr7.2:7645811-7645830 MS.gene007123:intron 40.0%
GGTTTATAAATGCTCGAGTC+AGG - chr7.2:7647032-7647051 MS.gene007123:intron 40.0%
GTAAAGGTCGTCAAACATAG+TGG - chr7.2:7645790-7645809 MS.gene007123:intron 40.0%
GTGAGCTAGCTCCAAATTAA+TGG + chr7.2:7645382-7645401 None:intergenic 40.0%
GTTGAATTGGGAAAGAAGAG+TGG - chr7.2:7644210-7644229 MS.gene007123:CDS 40.0%
TCAACATGCAAAACCCAAAG+AGG - chr7.2:7647755-7647774 MS.gene007123:CDS 40.0%
TCCAACACTCAACAATTCGT+TGG - chr7.2:7643853-7643872 MS.gene007123:CDS 40.0%
TCTCTCTAGTAGAGCCTATT+TGG - chr7.2:7645457-7645476 MS.gene007123:intron 40.0%
TCTCTGGTACCCCATTAATT+TGG - chr7.2:7645368-7645387 MS.gene007123:intron 40.0%
TCTTTCAGGCAATCCTCTTT+GGG + chr7.2:7646525-7646544 None:intergenic 40.0%
TGCATAAGTTCATGGTTCCT+TGG + chr7.2:7647379-7647398 None:intergenic 40.0%
TGGCTTAGAGTCAACAATAG+AGG - chr7.2:7645810-7645829 MS.gene007123:intron 40.0%
TTAGAGTCAACAATAGAGGG+TGG - chr7.2:7645814-7645833 MS.gene007123:intron 40.0%
! AACAAGTGTTTGAAGTCCGT+CGG + chr7.2:7643689-7643708 None:intergenic 40.0%
! AATGGTGGAAGAAATGTACG+TGG - chr7.2:7647066-7647085 MS.gene007123:CDS 40.0%
! ACCCAATTGGTGATATTGGT+AGG - chr7.2:7647542-7647561 MS.gene007123:CDS 40.0%
! ACCTTTAGGTTCTGTTTCAG+AGG + chr7.2:7647194-7647213 None:intergenic 40.0%
! CATTGATTGTACTGCATGTG+TGG + chr7.2:7643952-7643971 None:intergenic 40.0%
! TAGAAAAGTGTACTTACGGG+TGG + chr7.2:7646589-7646608 None:intergenic 40.0%
! TCTGAAATCCAATCAAGTGG+TGG - chr7.2:7643655-7643674 MS.gene007123:CDS 40.0%
!! AATTGTTGAGTGTTGGAAGG+TGG + chr7.2:7643850-7643869 None:intergenic 40.0%
!! ACCTCTGAAACAGAACCTAA+AGG - chr7.2:7647190-7647209 MS.gene007123:CDS 40.0%
!! ACGAATTGTTGAGTGTTGGA+AGG + chr7.2:7643853-7643872 None:intergenic 40.0%
!! AGCACATGAGCTTTTAGAAG+AGG - chr7.2:7644167-7644186 MS.gene007123:CDS 40.0%
!! GCTTTTGGAAATGTCTTGTG+TGG + chr7.2:7647224-7647243 None:intergenic 40.0%
!! TGGATCAATAATTGGTGGTG+GGG - chr7.2:7644290-7644309 MS.gene007123:CDS 40.0%
!! TTCCAAGGTGTTGAATTGGA+GGG + chr7.2:7644967-7644986 None:intergenic 40.0%
!! TTTCCAAGGTGTTGAATTGG+AGG + chr7.2:7644968-7644987 None:intergenic 40.0%
!!! GGTTTTTTAGGACTTCCTTG+TGG + chr7.2:7647358-7647377 None:intergenic 40.0%
AACTGTGCAGCAAACCTCTT+TGG + chr7.2:7647772-7647791 None:intergenic 45.0%
ACACATGCCATCTCCATTGT+TGG - chr7.2:7645307-7645326 MS.gene007123:intron 45.0%
ACAGTACCACCATCAAATGG+AGG - chr7.2:7646235-7646254 MS.gene007123:intron 45.0%
ACTGTGCAGCAAACCTCTTT+GGG + chr7.2:7647771-7647790 None:intergenic 45.0%
ATGGCAACGTACTATCATGG+TGG - chr7.2:7643628-7643647 MS.gene007123:CDS 45.0%
ATGGCAAGCACCTATCAAGA+AGG + chr7.2:7645235-7645254 None:intergenic 45.0%
CACATGCCATCTCCATTGTT+GGG - chr7.2:7645308-7645327 MS.gene007123:intron 45.0%
CAGACAGTACCACCATCAAA+TGG - chr7.2:7646232-7646251 MS.gene007123:intron 45.0%
CCACAATCATCACCACTTGT+TGG - chr7.2:7647274-7647293 MS.gene007123:CDS 45.0%
CTTTCAGGCAATCCTCTTTG+GGG + chr7.2:7646524-7646543 None:intergenic 45.0%
GAAAACATAGTTACCGGCAG+CGG + chr7.2:7643782-7643801 None:intergenic 45.0%
GAAATCCAATCAAGTGGTGG+CGG - chr7.2:7643658-7643677 MS.gene007123:CDS 45.0%
GAACTAGAAGGGATACCACA+AGG - chr7.2:7647340-7647359 MS.gene007123:CDS 45.0%
GAACTCAGAATCTGAATCCC+CGG + chr7.2:7644132-7644151 None:intergenic 45.0%
GAATGATCCAGCATAACGCT+TGG - chr7.2:7646495-7646514 MS.gene007123:intron 45.0%
GAATTGGGAAAGAAGAGTGG+TGG - chr7.2:7644213-7644232 MS.gene007123:CDS 45.0%
GACGTTGTACCTTCTTTGCA+TGG - chr7.2:7643919-7643938 MS.gene007123:CDS 45.0%
GATTGTACTGCATGTGTGGA+AGG + chr7.2:7643948-7643967 None:intergenic 45.0%
GCCAACGAATTGTTGAGTGT+TGG + chr7.2:7643857-7643876 None:intergenic 45.0%
GTATCTCTAGCTAATGGCAG+AGG + chr7.2:7645265-7645284 None:intergenic 45.0%
GTGCCTCTAGACCTTAGATT+TGG + chr7.2:7645426-7645445 None:intergenic 45.0%
TAAATGCTCGAGTCAGGCTT+TGG - chr7.2:7647038-7647057 MS.gene007123:CDS 45.0%
TCTTAGTCTCTCTTCACAGC+CGG - chr7.2:7644032-7644051 MS.gene007123:CDS 45.0%
TTCGTTGTAACACCAGAAGC+CGG + chr7.2:7644093-7644112 None:intergenic 45.0%
TTGGGTGAAGAGGATTGCTT+TGG - chr7.2:7646398-7646417 MS.gene007123:intron 45.0%
TTTCAGCAGCTGTAGAGTTG+AGG + chr7.2:7643804-7643823 None:intergenic 45.0%
! AAAAGTGTACTTACGGGTGG+AGG + chr7.2:7646586-7646605 None:intergenic 45.0%
! CCAACAAGTGGTGATGATTG+TGG + chr7.2:7647277-7647296 None:intergenic 45.0%
! GCAAAGAAGGTACAACGTCA+TGG + chr7.2:7643918-7643937 None:intergenic 45.0%
!! ATCAATAATTGGTGGTGGGG+AGG - chr7.2:7644293-7644312 MS.gene007123:CDS 45.0%
!! CTGTTTCTGTTCTTCGTGCT+TGG - chr7.2:7646546-7646565 MS.gene007123:intron 45.0%
!! GAATCATCAGGAGTTGGTAG+TGG - chr7.2:7644261-7644280 MS.gene007123:CDS 45.0%
!! GGTGAGAGCTTTTTCTTGAG+AGG + chr7.2:7647173-7647192 None:intergenic 45.0%
!! TCAATAATTGGTGGTGGGGA+GGG - chr7.2:7644294-7644313 MS.gene007123:CDS 45.0%
!! TCCAAGGTGTTGAATTGGAG+GGG + chr7.2:7644966-7644985 None:intergenic 45.0%
!! TGGTGTTGTTGGTGGTTAAG+AGG + chr7.2:7643883-7643902 None:intergenic 45.0%
!!! TTTTTATAGATTAATTTTTT+TGG - chr7.2:7644479-7644498 MS.gene007123:intron 5.0%
AACAGGGCTTACTAGGAGTC+AGG - chr7.2:7646905-7646924 MS.gene007123:intron 50.0%
CACAATTGACCCAAACACGG+CGG - chr7.2:7643975-7643994 MS.gene007123:CDS 50.0%
CACAGTCAATGGTACGTACG+TGG - chr7.2:7645119-7645138 MS.gene007123:CDS 50.0%
CCACAACCTCCATTTGATGG+TGG + chr7.2:7646244-7646263 None:intergenic 50.0%
CCACCATCAAATGGAGGTTG+TGG - chr7.2:7646241-7646260 MS.gene007123:intron 50.0%
GGAAGGAAGCCATGCAAAGA+AGG + chr7.2:7643931-7643950 None:intergenic 50.0%
GGTGAAGAGGATTGCTTTGG+AGG - chr7.2:7646401-7646420 MS.gene007123:intron 50.0%
GTTGGTTGAAGGTGGAGCAA+AGG - chr7.2:7646207-7646226 MS.gene007123:intron 50.0%
TTGGGAAAGAAGAGTGGTGG+TGG - chr7.2:7644216-7644235 MS.gene007123:CDS 50.0%
! TGTCCTAGCTGAACCGATTC+CGG + chr7.2:7646288-7646307 None:intergenic 50.0%
!! AGTCAGGCTTTGGAAGCCAA+TGG - chr7.2:7647048-7647067 MS.gene007123:CDS 50.0%
!! CGTGGATTTGGTGTTGTTGG+TGG + chr7.2:7643891-7643910 None:intergenic 50.0%
!! TCATCAGGAGTTGGTAGTGG+AGG - chr7.2:7644264-7644283 MS.gene007123:CDS 50.0%
AACGCTTGGAGACCCCAAAG+AGG - chr7.2:7646509-7646528 MS.gene007123:intron 55.0%
GATACACCACGCGCTCAACA+AGG - chr7.2:7644003-7644022 MS.gene007123:CDS 55.0%
GCCCCTCCAATTCAACACCT+TGG - chr7.2:7644962-7644981 MS.gene007123:CDS 55.0%
GTAACACCAGAAGCCGGAGA+CGG + chr7.2:7644087-7644106 None:intergenic 55.0%
TTCGAACAAGCCGCCGGAAT+CGG - chr7.2:7646272-7646291 MS.gene007123:intron 55.0%
!! ATCCAATCAAGTGGTGGCGG+CGG - chr7.2:7643661-7643680 MS.gene007123:CDS 55.0%
!! CAGGCTTTGGAAGCCAATGG+TGG - chr7.2:7647051-7647070 MS.gene007123:CDS 55.0%
!! GAGTGGTGGTGGAATGAGCA+AGG - chr7.2:7644227-7644246 MS.gene007123:CDS 55.0%
!! GCGCGTGGATTTGGTGTTGT+TGG + chr7.2:7643894-7643913 None:intergenic 55.0%
!! GGAGTTGGTAGTGGAGGAGA+TGG - chr7.2:7644270-7644289 MS.gene007123:CDS 55.0%
CAACCTTCTCATGCCGCTGC+CGG - chr7.2:7643766-7643785 MS.gene007123:CDS 60.0%
CGTCATGGTGCGCGTGGATT+TGG + chr7.2:7643903-7643922 None:intergenic 60.0%
GACAGTCCTTGTTGAGCGCG+TGG + chr7.2:7644012-7644031 None:intergenic 60.0%
GGGGTCTCCAAGCGTTATGC+TGG + chr7.2:7646505-7646524 None:intergenic 60.0%
GTACAACGTCATGGTGCGCG+TGG + chr7.2:7643909-7643928 None:intergenic 60.0%
TATCACGCGCCGCCGTGTTT+GGG + chr7.2:7643987-7644006 None:intergenic 60.0%
TCCTCGTTCGAACAAGCCGC+CGG - chr7.2:7646266-7646285 MS.gene007123:intron 60.0%
TTACCGGCAGCGGCATGAGA+AGG + chr7.2:7643772-7643791 None:intergenic 60.0%
! CCTAGCTGAACCGATTCCGG+CGG + chr7.2:7646285-7646304 None:intergenic 60.0%
!! ATTGGTGGTGGGGAGGGAAG+TGG - chr7.2:7644300-7644319 MS.gene007123:CDS 60.0%
AGGTGGCGCGTGAGGTGAGA+AGG + chr7.2:7643833-7643852 None:intergenic 65.0%
GTATCACGCGCCGCCGTGTT+TGG + chr7.2:7643988-7644007 None:intergenic 65.0%
GTCTGGTGGTTCGCCGTCTC+CGG - chr7.2:7644071-7644090 MS.gene007123:CDS 65.0%
GTGTTGGAAGGTGGCGCGTG+AGG + chr7.2:7643841-7643860 None:intergenic 65.0%
! CCGCCGGAATCGGTTCAGCT+AGG - chr7.2:7646282-7646301 MS.gene007123:intron 65.0%
! TCCGGCGGCTTGTTCGAACG+AGG + chr7.2:7646270-7646289 None:intergenic 65.0%
CGCCGCCGCCACCACTTGAT+TGG + chr7.2:7643666-7643685 None:intergenic 70.0%
GGTTCGCCGTCTCCGGCTTC+TGG - chr7.2:7644078-7644097 MS.gene007123:CDS 70.0%
!!! AGTGGTGGCGGCGGCGCCGA+CGG - chr7.2:7643670-7643689 MS.gene007123:CDS 80.0%


Chromosome Type Strat End Strand Name
chr7.2 gene 7643628 7647813 7643628 ID=MS.gene007123
chr7.2 mRNA 7643628 7647813 7643628 ID=MS.gene007123.t1;Parent=MS.gene007123
chr7.2 exon 7647037 7647813 7647037 ID=MS.gene007123.t1.exon1;Parent=MS.gene007123.t1
chr7.2 CDS 7647037 7647813 7647037 ID=cds.MS.gene007123.t1;Parent=MS.gene007123.t1
chr7.2 exon 7644850 7645223 7644850 ID=MS.gene007123.t1.exon2;Parent=MS.gene007123.t1
chr7.2 CDS 7644850 7645223 7644850 ID=cds.MS.gene007123.t1;Parent=MS.gene007123.t1
chr7.2 exon 7644515 7644575 7644515 ID=MS.gene007123.t1.exon3;Parent=MS.gene007123.t1
chr7.2 CDS 7644515 7644575 7644515 ID=cds.MS.gene007123.t1;Parent=MS.gene007123.t1
chr7.2 exon 7643628 7644419 7643628 ID=MS.gene007123.t1.exon4;Parent=MS.gene007123.t1
chr7.2 CDS 7643628 7644419 7643628 ID=cds.MS.gene007123.t1;Parent=MS.gene007123.t1
Gene Sequence

>MS.gene007123

ATGGCAACGTACTATCATGGTGGTAATTCTGAAATCCAATCAAGTGGTGGCGGCGGCGCCGACGGACTTCAAACACTTGTTCTCATGAATCCAGGCTATATACAATATTCTGATGCTACACAGCAACAACAAGCTCAACAACCTTCTCATGCCGCTGCCGGTAACTATGTTTTCCTCAACTCTACAGCTGCTGAAAACAACTCCTTCTCACCTCACGCGCCACCTTCCAACACTCAACAATTCGTTGGCATACCTCTTAACCACCAACAACACCAAATCCACGCGCACCATGACGTTGTACCTTCTTTGCATGGCTTCCTTCCACACATGCAGTACAATCAATGGAACACAATTGACCCAAACACGGCGGCGCGTGATACACCACGCGCTCAACAAGGACTGTCTCTTAGTCTCTCTTCACAGCCGGCAAGATTCGTTTCTATGTCTGGTGGTTCGCCGTCTCCGGCTTCTGGTGTTACAACGAATAATAACAATGGGAATCCGGGGATTCAGATTCTGAGTTCAAAGTATTTAAGGGCAGCACATGAGCTTTTAGAAGAGGTTGTGAATGTGAATAGTGGTGTTGAATTGGGAAAGAAGAGTGGTGGTGGAATGAGCAAGGTGAATATTGGAGAATCATCAGGAGTTGGTAGTGGAGGAGATGGATCAATAATTGGTGGTGGGGAGGGAAGTGGAAAACGTAGCTCTGAGCTATCAACAGCTGAAAGACAAGAAATACAGATGAAGAAAGCTAAGCTAATTACCATGCTTGATGAGGTATTTCATTTCATTTCTTCACTTTCATGTGATTTTGGCTATTTGCAATAATTAATTAATTCAAACTATGATATTTTTTATAGATTAATTTTTTTGGTGAATGTATATAATTTTATTTTATAGATTATAATTATGTATTTTATAAGTTTAGTATAATTCTTGTTCAAAAAAAAAGTTTAGTATAATTTTTTGGCCATTTTAATTCATTATAAAAGTTAGAGACTAAAAATATATGTTTTTTGTAAAAGATAATGAATAAAAATTAATTAAATTTTTATAGGATTTAAAATTAGAAAATTGACATTTTGTAGTTTTACTAAAATTATATTTAACTTTTTATCTCTACGTGGAGAATTGTTTTTGCTAAAGTGGAGCAACTGAGCAAGATTGTTACAAGTATGATGTATACTGCTTTCATTGATTTATCATTGCAATGCAATGAATGAAAATCCACCACTCACAGTTTTTCTATCATTCGAGTATTTAAGCGGTTTCACTTGTACAAGTTATTTATTTTAACAATTTTTTTTTTAACTGGTGTATTCAATATAACTACTGCCCCTCCAATTCAACACCTTGGAAAAAAAACTACTCTTGTACTTAAGGAAAGGGGGTTATGATAATCTGGAATTTCTAACAATAACTTATAACTCAACATGATTTGGTTTGGCCTTTCTAAAGGAAAAACTCAACATCCTTACATTAATATTTTATCACAGTCAATGGTACGTACGTGGACCTTATAAATTGCAAGGAATAGCATATACTGGTATTATTGCTAGGTAGGCACCATTTATAATTTAACCTTGATGTACCCATTTAGACTACCTTCTTGATAGGTGCTTGCCATTTAATCACCTCTGCCATTAGCTAGAGATACTCTAAAGAAAGGTTTGTTAGGGACACATGCCATCTCCATTGTTGGGTATATTAGTCTTAGGTTTCTAATTAGGAATAGTTATTTCTCTGGTACCCCATTAATTTGGAGCTAGCTCACTTTGATGCGTACTTATTGATACCAAATCTAAGGTCTAGAGGCACCAACTTTCTCTTCTCTCTAGTAGAGCCTATTTGGTGTTTATGATATATACTATTTGGACGTGCATGGAGTTATTATTTGTGAGTCATTTAGTAAATTTTTTGGTGTTAGACCGGAAGAATGTGATATTGATTAGATATTTAAATGTGCACAAACCAAATTGAGGCTCAGAAAGCATAGAGTGAATATACTCTCAAATCTCAAAAGATAAAACTCAATTTTTAGCTTGAAACTTGGATATACATAGGTAGATATTGTCCCTATTTGTATTAATCACACGGGTCAATCTACAGTAGAAATAATATTATAGCAATAAATGACATAAATGGAAATACAATCTTTTAAAGTAAAGGTCGTCAAACATAGTGGCTTAGAGTCAACAATAGAGGGTGGTGCAAATCCTTACTCTTGTCCTTTGAAAAGGTGTAACTTAAGTAATTGTTGATATTAGTGAAATTTTAAATAGACTTAATAAAAACTTTTGATTCTATTAGTATTAGTAATTTTGATTGTGTCAATTTAGTTCATGAAAATAGAGACGAATACCATAAATCATTTCAATATTTTATTAATTTCAATAAAACTAATTGCATGGATTAATTAAATGAAATGAATTGTAAATATAAATTGACTTTACAAAGCCATCTAATGAAAATTCACTATTTTGTCACATGCCTCATTTTTATAATTACATTTTGAAATTAACGGTATGATATAAAAATAAAAGATTCTTGTTAAATGTCTGACTAAAATGAATTTACTTGTTGGTTGAAGGTGGAGCAAAGGTACAGACAGTACCACCATCAAATGGAGGTTGTGGTTTCCTCGTTCGAACAAGCCGCCGGAATCGGTTCAGCTAGGACATACACTGCCCTTGCACTACAAACAATCTCAAAGCAGTTTCGGTGTTTGAAAGATGCAATAACAGGACAAATTAAAGCTACAAATAAGAGTTTGGGTGAAGAGGATTGCTTTGGAGGTAAAATTGAAGGTTCAAGGCTCAAATATGTTGATCATCAACTACGTCAACAACGTGCTCTACAACAATTGGGAATGATCCAGCATAACGCTTGGAGACCCCAAAGAGGATTGCCTGAAAGATCTGTTTCTGTTCTTCGTGCTTGGCTCTTTGAACATTTCCTCCACCCGTAAGTACACTTTTCTAATTTTTACTCACTTCAAAGTTATGAAGCACGGACACTAATTACACGTTGATACCAATAAAGTGTTAGAGAAAATAACATAATTCAATGTAATCACAAGTGTTGATGTCGTCGTGTTTGTGTCCAACACAACACTTGTTGAACATCGTGACATGCCAAGTGCTCAAGATGTATAAATGCTCGGAGTCTTTAAAATCTTCGGTATATAGTCTTTAAACTCTTGTCAATTTTATGCTGATATCACTGAATTTGTTTTCAGCTATCCAAAGGATTCAGACAAGCACATGCTTGCAAAACAAACAGGGCTTACTAGGAGTCAGGTAATCAATCAATATAATTTTGGAACAATTTCTTTCCTTATTTTTGGCATATTCAAATTCAAAGTGTTAATAAAATTTTGTTTGAATTGCAACAGGTTTCAAATTGGTTTATAAATGCTCGAGTCAGGCTTTGGAAGCCAATGGTGGAAGAAATGTACGTGGAAGAAATGAAGGAAAATGAACTAAATGGATCTGAGGATAAACAAAGTAAGAGCAATGAAGATTCTTCAATGAAAATAACATCCTCTCAAGAAAAAGCTCTCACCTCTGAAACAGAACCTAAAGGTTACAATTCCACACAAGACATTTCCAAAAGCCATGAAACTCCAATAATTTCTGTTTCTAGACCACAATCATCACCACTTGTTGGAAATGTTAGAAACAATTCAGGATTCAGCTTCATTGGATCATCAGAACTAGAAGGGATACCACAAGGAAGTCCTAAAAAACCAAGGAACCATGAACTTATGCATAACCCTAATAGTTTCATTGATGTTAAGCACAATGAGGCAAATAATGAGGAACTATCAATGAAATTTGGTGATGAGAGACAAAATAGAGATGGTTACTCTTTTATGGGAAACCAAACAAACTTCATTGGTGGATTTGGACAATACCCAATTGGTGATATTGGTAGGTTTGACTCAGAACAATTCACACCAAGGTTTTCAAGTAATAATGTTTCACTCACTCTTGGTCTTGATTCAATACAAGGAAATCATCAAACATTTCTACCAAACCAAAACATTCAACTAGGAAGAAGCATTGATATAAGTGAACCAAATGAGTTTGGTTCTATAAACACTTCCTCTCCTCAATATGAAAGTATCAACATGCAAAACCCAAAGAGGTTTGCTGCACAGTTGTTACCAGATTTTGTGTCCTAA
Protein sequence

>MS.gene007123.t1

MATYYHGGNSEIQSSGGGGADGLQTLVLMNPGYIQYSDATQQQQAQQPSHAAAGNYVFLNSTAAENNSFSPHAPPSNTQQFVGIPLNHQQHQIHAHHDVVPSLHGFLPHMQYNQWNTIDPNTAARDTPRAQQGLSLSLSSQPARFVSMSGGSPSPASGVTTNNNNGNPGIQILSSKYLRAAHELLEEVVNVNSGVELGKKSGGGMSKVNIGESSGVGSGGDGSIIGGGEGSGKRSSELSTAERQEIQMKKAKLITMLDEVEQRYRQYHHQMEVVVSSFEQAAGIGSARTYTALALQTISKQFRCLKDAITGQIKATNKSLGEEDCFGGKIEGSRLKYVDHQLRQQRALQQLGMIQHNAWRPQRGLPERSVSVLRAWLFEHFLHPYPKDSDKHMLAKQTGLTRSQVSNWFINARVRLWKPMVEEMYVEEMKENELNGSEDKQSKSNEDSSMKITSSQEKALTSETEPKGYNSTQDISKSHETPIISVSRPQSSPLVGNVRNNSGFSFIGSSELEGIPQGSPKKPRNHELMHNPNSFIDVKHNEANNEELSMKFGDERQNRDGYSFMGNQTNFIGGFGQYPIGDIGRFDSEQFTPRFSSNNVSLTLGLDSIQGNHQTFLPNQNIQLGRSIDISEPNEFGSINTSSPQYESINMQNPKRFAAQLLPDFVS