Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007289.t1 | RHN48630.1 | 92.8 | 318 | 19 | 2 | 1 | 315 | 152 | 468 | 1.30E-106 | 396.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007289.t1 | Q9LZS0 | 38.2 | 225 | 118 | 4 | 1 | 212 | 156 | 372 | 7.6e-26 | 119.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007289.t1 | A0A396H5V1 | 92.8 | 318 | 19 | 2 | 1 | 315 | 152 | 468 | 9.6e-107 | 396.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene007289.t1 | TF | Trihelix |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007289.t1 | MTR_1g060990 | 53.406 | 367 | 95 | 12 | 1 | 318 | 168 | 507 | 3.56e-107 | 322 |
| MS.gene007289.t1 | MTR_1g492790 | 38.869 | 283 | 137 | 9 | 1 | 258 | 151 | 422 | 9.16e-50 | 173 |
| MS.gene007289.t1 | MTR_1g098900 | 33.716 | 261 | 119 | 3 | 4 | 210 | 96 | 356 | 6.29e-33 | 129 |
| MS.gene007289.t1 | MTR_1g098870 | 32.456 | 228 | 124 | 3 | 6 | 212 | 96 | 314 | 2.26e-24 | 103 |
| MS.gene007289.t1 | MTR_6g035370 | 67.925 | 53 | 14 | 1 | 6 | 58 | 96 | 145 | 3.71e-16 | 79.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007289.t1 | AT5G03680 | 51.181 | 254 | 87 | 7 | 1 | 232 | 156 | 394 | 3.12e-70 | 229 |
| MS.gene007289.t1 | AT3G10000 | 39.489 | 352 | 172 | 7 | 1 | 314 | 125 | 473 | 1.57e-61 | 204 |
| MS.gene007289.t1 | AT3G10000 | 38.663 | 344 | 170 | 7 | 9 | 314 | 123 | 463 | 1.27e-56 | 191 |
| MS.gene007289.t1 | AT1G76890 | 32.197 | 264 | 118 | 6 | 4 | 211 | 80 | 338 | 3.40e-26 | 109 |
| MS.gene007289.t1 | AT1G33240 | 55.556 | 72 | 29 | 1 | 4 | 75 | 101 | 169 | 3.44e-16 | 79.7 |
| MS.gene007289.t1 | AT1G33240 | 55.556 | 72 | 29 | 1 | 4 | 75 | 101 | 169 | 4.98e-16 | 79.3 |
| MS.gene007289.t1 | AT1G33240 | 64.407 | 59 | 18 | 1 | 4 | 62 | 62 | 117 | 6.72e-16 | 79.0 |
| MS.gene007289.t1 | AT1G76880 | 64.151 | 53 | 19 | 0 | 4 | 56 | 100 | 152 | 8.32e-16 | 78.6 |
Find 60 sgRNAs with CRISPR-Local
Find 94 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGCTAGGGATGCTGCTTTAA+TGG | 0.226192 | 7.4:-6675909 | MS.gene007289:CDS |
| ATTATTGCTTTCTCCATATA+AGG | 0.243458 | 7.4:+6676354 | None:intergenic |
| CGTCAACTTGAAGCCTTATA+TGG | 0.244935 | 7.4:-6676367 | MS.gene007289:CDS |
| TGATTCACAGCTGAAGAAAT+TGG | 0.325251 | 7.4:-6676086 | MS.gene007289:CDS |
| TTGGGGTATGACACTAATTC+AGG | 0.332866 | 7.4:-6675247 | MS.gene007289:intron |
| GGAGTAGTGGAAGAAGCTTC+TGG | 0.362256 | 7.4:-6676132 | MS.gene007289:CDS |
| TTGATCATTAACATCACAAT+AGG | 0.364480 | 7.4:+6675709 | None:intergenic |
| CATACCCCAACAACACTTGA+TGG | 0.388209 | 7.4:+6675260 | None:intergenic |
| CACAAAGACATTGGAACAAA+AGG | 0.401812 | 7.4:-6676032 | MS.gene007289:CDS |
| ATATTCCATCAAGTGTTGTT+GGG | 0.413234 | 7.4:-6675265 | MS.gene007289:CDS |
| GAAACAAGAGAAAGAAAGGT+TGG | 0.430312 | 7.4:-6675975 | MS.gene007289:CDS |
| CCCTCAGTACTCATCAAGAA+TGG | 0.434497 | 7.4:+6675611 | None:intergenic |
| TGTGGGAGTGAAGATGAAGA+AGG | 0.446001 | 7.4:+6676331 | None:intergenic |
| GGAGGAAACAAGAGAAAGAA+AGG | 0.446373 | 7.4:-6675979 | MS.gene007289:CDS |
| TTTGGGCTAAAGAAAGAGCT+TGG | 0.456386 | 7.4:-6675937 | MS.gene007289:CDS |
| AAACATTTCCTGATTGTTGT+TGG | 0.473343 | 7.4:+6676294 | None:intergenic |
| GGAGAAGCAAGAAGAATGGT+TGG | 0.477059 | 7.4:-6676062 | MS.gene007289:CDS |
| AAAGAGCTTGGATTGAAGCT+AGG | 0.477669 | 7.4:-6675925 | MS.gene007289:CDS |
| TATATTCCATCAAGTGTTGT+TGG | 0.481226 | 7.4:-6675266 | MS.gene007289:CDS |
| TATCACAGTGTTTGTTAATG+TGG | 0.481655 | 7.4:+6676266 | None:intergenic |
| GGAAAAGCAGGAAGACAAGA+TGG | 0.483853 | 7.4:-6676409 | MS.gene007289:CDS |
| GTGGGAGAATTACAACTTGA+AGG | 0.483975 | 7.4:-6675579 | MS.gene007289:intron |
| AAGACCAAGGAAGGAAAAGC+AGG | 0.489921 | 7.4:-6676421 | MS.gene007289:CDS |
| TATAATGTTAACAATGGAGA+TGG | 0.503073 | 7.4:-6675740 | MS.gene007289:CDS |
| AATGATCAAAGGGAAGAACT+TGG | 0.504968 | 7.4:-6675695 | MS.gene007289:CDS |
| ACTCAATCTTCTTCTCATGA+TGG | 0.508615 | 7.4:-6675842 | MS.gene007289:CDS |
| CCTCAGTACTCATCAAGAAT+GGG | 0.515932 | 7.4:+6675612 | None:intergenic |
| TTGTGATGTTAATGATCAAA+GGG | 0.516121 | 7.4:-6675705 | MS.gene007289:CDS |
| TGGAAATAATAAGAAGAGAA+AGG | 0.518093 | 7.4:-6675822 | MS.gene007289:CDS |
| ATCACAGTGTTTGTTAATGT+GGG | 0.521709 | 7.4:+6676267 | None:intergenic |
| TGTTTATATAATGTTAACAA+TGG | 0.527902 | 7.4:-6675746 | MS.gene007289:CDS |
| CCATTCTTGATGAGTACTGA+GGG | 0.532198 | 7.4:-6675611 | MS.gene007289:CDS |
| GGGTGTTAAGAGAAGAAGAG+TGG | 0.532295 | 7.4:-6676000 | MS.gene007289:CDS |
| AAGAGCTTGGATTGAAGCTA+GGG | 0.532871 | 7.4:-6675924 | MS.gene007289:CDS |
| TACTGAGGGAGGAAATATGT+GGG | 0.537099 | 7.4:-6675597 | MS.gene007289:CDS |
| ATTGTGATGTTAATGATCAA+AGG | 0.541913 | 7.4:-6675706 | MS.gene007289:CDS |
| TGGTGGAGAAGCAAGAAGAA+TGG | 0.548730 | 7.4:-6676066 | MS.gene007289:CDS |
| GTTAACAATGGAGATGGAGC+TGG | 0.562473 | 7.4:-6675734 | MS.gene007289:CDS |
| ATGATAACAACAATGTTGAT+CGG | 0.565825 | 7.4:-6675772 | MS.gene007289:CDS |
| TTCACAGCTGAAGAAATTGG+TGG | 0.567445 | 7.4:-6676083 | MS.gene007289:CDS |
| GGGAGAGTACAAACAAATGA+TGG | 0.567681 | 7.4:-6675674 | MS.gene007289:CDS |
| GAAAAGCAGGAAGACAAGAT+GGG | 0.570202 | 7.4:-6676408 | MS.gene007289:CDS |
| TATTCCATCAAGTGTTGTTG+GGG | 0.581444 | 7.4:-6675264 | MS.gene007289:CDS |
| CAAAGAGAATGAGTTCTCCA+TGG | 0.584262 | 7.4:-6676170 | MS.gene007289:CDS |
| ATGATCAAAGGGAAGAACTT+GGG | 0.587215 | 7.4:-6675694 | MS.gene007289:CDS |
| GGAGAAACTCACAAAGACAT+TGG | 0.587360 | 7.4:-6676041 | MS.gene007289:CDS |
| AACATGGCTATCAAAGGAGT+GGG | 0.590438 | 7.4:-6676489 | MS.gene007289:CDS |
| CCCATTCTTGATGAGTACTG+AGG | 0.594659 | 7.4:-6675612 | MS.gene007289:CDS |
| GTGAAGAACATGGCTATCAA+AGG | 0.598664 | 7.4:-6676495 | MS.gene007289:CDS |
| AGGATAATGTGTGAAGAACA+TGG | 0.603245 | 7.4:-6676505 | None:intergenic |
| CGAATTCAGTGGAGTTTGTG+AGG | 0.604333 | 7.4:+6676236 | None:intergenic |
| GAACATGGCTATCAAAGGAG+TGG | 0.606340 | 7.4:-6676490 | MS.gene007289:CDS |
| TGATGATCATAGTACTCATG+AGG | 0.611714 | 7.4:-6676197 | MS.gene007289:CDS |
| GATGATCATAGTACTCATGA+GGG | 0.620992 | 7.4:-6676196 | MS.gene007289:CDS |
| CGATGATGTGTCGAATTCAG+TGG | 0.625749 | 7.4:+6676225 | None:intergenic |
| TGTTAAGAGAAGAAGAGTGG+AGG | 0.635425 | 7.4:-6675997 | MS.gene007289:CDS |
| TAGTGGAAGAAGCTTCTGGA+AGG | 0.636390 | 7.4:-6676128 | MS.gene007289:CDS |
| GTACTGAGGGAGGAAATATG+TGG | 0.650852 | 7.4:-6675598 | MS.gene007289:CDS |
| TTCTTGATGAGTACTGAGGG+AGG | 0.678329 | 7.4:-6675608 | MS.gene007289:CDS |
| ATGATCATAGTACTCATGAG+GGG | 0.712141 | 7.4:-6676195 | MS.gene007289:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTGTCAAAAAAATATAAATA+TGG | - | chr7.4:6676260-6676279 | MS.gene007289:CDS | 10.0% |
| !!! | TTTATATTTTTTTGACAAAA+TGG | + | chr7.4:6676258-6676277 | None:intergenic | 10.0% |
| !! | TATTACTTATTAGGTAATTA+AGG | - | chr7.4:6676182-6676201 | MS.gene007289:CDS | 15.0% |
| !! | TGATGATATTATTACTTATT+AGG | - | chr7.4:6676173-6676192 | MS.gene007289:CDS | 15.0% |
| !! | TGTTTATATAATGTTAACAA+TGG | - | chr7.4:6675858-6675877 | MS.gene007289:CDS | 15.0% |
| !!! | ATCAATATTTTTATCAATCT+CGG | - | chr7.4:6676211-6676230 | MS.gene007289:CDS | 15.0% |
| !!! | TCATTCTTTTATGTAATTTT+AGG | - | chr7.4:6676491-6676510 | MS.gene007289:CDS | 15.0% |
| !! | AATGATATGTAATTCATGTA+TGG | - | chr7.4:6676465-6676484 | MS.gene007289:CDS | 20.0% |
| !!! | ACAAAAAGTTAGTTTAATGA+TGG | - | chr7.4:6676310-6676329 | MS.gene007289:CDS | 20.0% |
| !!! | ACAACTTTTTTTTTCTTCTA+AGG | - | chr7.4:6676085-6676104 | MS.gene007289:CDS | 20.0% |
| !!! | CAAAAAGTTAGTTTAATGAT+GGG | - | chr7.4:6676311-6676330 | MS.gene007289:CDS | 20.0% |
| ! | ATGATAACAACAATGTTGAT+CGG | - | chr7.4:6675832-6675851 | MS.gene007289:CDS | 25.0% |
| ! | ATTATTGCTTTCTCCATATA+AGG | + | chr7.4:6675253-6675272 | None:intergenic | 25.0% |
| ! | ATTGTGATGTTAATGATCAA+AGG | - | chr7.4:6675898-6675917 | MS.gene007289:CDS | 25.0% |
| ! | GCAAAGCATAAATGATAATT+AGG | + | chr7.4:6676398-6676417 | None:intergenic | 25.0% |
| ! | TATAATGTTAACAATGGAGA+TGG | - | chr7.4:6675864-6675883 | MS.gene007289:CDS | 25.0% |
| ! | TATCATTTATGCTTTGCAAA+TGG | - | chr7.4:6676401-6676420 | MS.gene007289:CDS | 25.0% |
| ! | TGGAAATAATAAGAAGAGAA+AGG | - | chr7.4:6675782-6675801 | MS.gene007289:CDS | 25.0% |
| ! | TTGATCATTAACATCACAAT+AGG | + | chr7.4:6675898-6675917 | None:intergenic | 25.0% |
| ! | TTGTGATGTTAATGATCAAA+GGG | - | chr7.4:6675899-6675918 | MS.gene007289:CDS | 25.0% |
| !!! | GGAAAAAGAGCATAAATTTT+GGG | - | chr7.4:6675650-6675669 | MS.gene007289:CDS | 25.0% |
| !!! | TGGAAAAAGAGCATAAATTT+TGG | - | chr7.4:6675649-6675668 | MS.gene007289:CDS | 25.0% |
| !!! | TGGTACAAAAATTGTTTTGT+GGG | + | chr7.4:6675293-6675312 | None:intergenic | 25.0% |
| !!! | TTGGTACAAAAATTGTTTTG+TGG | + | chr7.4:6675294-6675313 | None:intergenic | 25.0% |
| AAACATTTCCTGATTGTTGT+TGG | + | chr7.4:6675313-6675332 | None:intergenic | 30.0% | |
| ATCTCGGAGAGAAAAAAATA+TGG | - | chr7.4:6676227-6676246 | MS.gene007289:CDS | 30.0% | |
| CAAATACTACAAAAAGACCA+AGG | - | chr7.4:6675170-6675189 | MS.gene007289:intron | 30.0% | |
| GAAGCTTTGCAAAAATTAAC+AGG | - | chr7.4:6675717-6675736 | MS.gene007289:CDS | 30.0% | |
| ! | ATATTCCATCAAGTGTTGTT+GGG | - | chr7.4:6676339-6676358 | MS.gene007289:CDS | 30.0% |
| ! | ATCACAGTGTTTGTTAATGT+GGG | + | chr7.4:6675340-6675359 | None:intergenic | 30.0% |
| ! | TATATTCCATCAAGTGTTGT+TGG | - | chr7.4:6676338-6676357 | MS.gene007289:CDS | 30.0% |
| ! | TATCACAGTGTTTGTTAATG+TGG | + | chr7.4:6675341-6675360 | None:intergenic | 30.0% |
| ! | TGTCTTCAATTTTTCTGTTG+AGG | + | chr7.4:6676291-6676310 | None:intergenic | 30.0% |
| ! | TTTTTGTACCAACAACAATC+AGG | - | chr7.4:6675302-6675321 | MS.gene007289:intron | 30.0% |
| AAGAGAAAAAAGAGGAGTAG+TGG | - | chr7.4:6675459-6675478 | MS.gene007289:intron | 35.0% | |
| AAGAGCTAACTGAAGAAATG+AGG | - | chr7.4:6676131-6676150 | MS.gene007289:CDS | 35.0% | |
| AATGATCAAAGGGAAGAACT+TGG | - | chr7.4:6675909-6675928 | MS.gene007289:CDS | 35.0% | |
| ACTCAATCTTCTTCTCATGA+TGG | - | chr7.4:6675762-6675781 | MS.gene007289:CDS | 35.0% | |
| AGAGCTAACTGAAGAAATGA+GGG | - | chr7.4:6676132-6676151 | MS.gene007289:CDS | 35.0% | |
| ATGATCAAAGGGAAGAACTT+GGG | - | chr7.4:6675910-6675929 | MS.gene007289:CDS | 35.0% | |
| ATGATCATAGTACTCATGAG+GGG | - | chr7.4:6675409-6675428 | MS.gene007289:intron | 35.0% | |
| CACAAAGACATTGGAACAAA+AGG | - | chr7.4:6675572-6675591 | MS.gene007289:intron | 35.0% | |
| CCATGGATAAGAGAAAAAAG+AGG | - | chr7.4:6675451-6675470 | MS.gene007289:intron | 35.0% | |
| GAAACAAGAGAAAGAAAGGT+TGG | - | chr7.4:6675629-6675648 | MS.gene007289:CDS | 35.0% | |
| GATGATCATAGTACTCATGA+GGG | - | chr7.4:6675408-6675427 | MS.gene007289:intron | 35.0% | |
| GGAACAAAAGGAAAAAGAGA+GGG | - | chr7.4:6675584-6675603 | MS.gene007289:CDS | 35.0% | |
| TACTACAAAAAGACCAAGGA+AGG | - | chr7.4:6675174-6675193 | MS.gene007289:intron | 35.0% | |
| TGATGATCATAGTACTCATG+AGG | - | chr7.4:6675407-6675426 | MS.gene007289:intron | 35.0% | |
| TGATTCACAGCTGAAGAAAT+TGG | - | chr7.4:6675518-6675537 | MS.gene007289:intron | 35.0% | |
| TGGAACAAAAGGAAAAAGAG+AGG | - | chr7.4:6675583-6675602 | MS.gene007289:CDS | 35.0% | |
| TTATGCTTTGCAAATGGATC+TGG | - | chr7.4:6676407-6676426 | MS.gene007289:CDS | 35.0% | |
| ! | TATTCCATCAAGTGTTGTTG+GGG | - | chr7.4:6676340-6676359 | MS.gene007289:CDS | 35.0% |
| !!! | AAACTTCAACTCACTGGTTT+TGG | + | chr7.4:6676064-6676083 | None:intergenic | 35.0% |
| !!! | CCTCTTTTTTCTCTTATCCA+TGG | + | chr7.4:6675454-6675473 | None:intergenic | 35.0% |
| AAAGAGCTTGGATTGAAGCT+AGG | - | chr7.4:6675679-6675698 | MS.gene007289:CDS | 40.0% | |
| AAAGGAGTGGGAAAAAATGC+AGG | - | chr7.4:6675127-6675146 | MS.gene007289:intron | 40.0% | |
| AACATGGCTATCAAAGGAGT+GGG | - | chr7.4:6675115-6675134 | MS.gene007289:intron | 40.0% | |
| AAGAGCTTGGATTGAAGCTA+GGG | - | chr7.4:6675680-6675699 | MS.gene007289:CDS | 40.0% | |
| AAGGAGTGGGAAAAAATGCA+GGG | - | chr7.4:6675128-6675147 | MS.gene007289:intron | 40.0% | |
| CAAAGAGAATGAGTTCTCCA+TGG | - | chr7.4:6675434-6675453 | MS.gene007289:intron | 40.0% | |
| CCTCAGTACTCATCAAGAAT+GGG | + | chr7.4:6675995-6676014 | None:intergenic | 40.0% | |
| GAAAAGCAGGAAGACAAGAT+GGG | - | chr7.4:6675196-6675215 | MS.gene007289:intron | 40.0% | |
| GGAGAAACTCACAAAGACAT+TGG | - | chr7.4:6675563-6675582 | MS.gene007289:intron | 40.0% | |
| GGAGGAAACAAGAGAAAGAA+AGG | - | chr7.4:6675625-6675644 | MS.gene007289:CDS | 40.0% | |
| GTGAAGAACATGGCTATCAA+AGG | - | chr7.4:6675109-6675128 | MS.gene007289:intron | 40.0% | |
| GTGGGAGAATTACAACTTGA+AGG | - | chr7.4:6676025-6676044 | MS.gene007289:CDS | 40.0% | |
| GTTGTGAAACTTCAACTCAC+TGG | + | chr7.4:6676070-6676089 | None:intergenic | 40.0% | |
| TACTGAGGGAGGAAATATGT+GGG | - | chr7.4:6676007-6676026 | MS.gene007289:CDS | 40.0% | |
| TGTTAAGAGAAGAAGAGTGG+AGG | - | chr7.4:6675607-6675626 | MS.gene007289:CDS | 40.0% | |
| TTCACAGCTGAAGAAATTGG+TGG | - | chr7.4:6675521-6675540 | MS.gene007289:intron | 40.0% | |
| TTGGGGTATGACACTAATTC+AGG | - | chr7.4:6676357-6676376 | MS.gene007289:CDS | 40.0% | |
| TTTGGGCTAAAGAAAGAGCT+TGG | - | chr7.4:6675667-6675686 | MS.gene007289:CDS | 40.0% | |
| ! | CGTCAACTTGAAGCCTTATA+TGG | - | chr7.4:6675237-6675256 | MS.gene007289:intron | 40.0% |
| ! | GGGAGAGTACAAACAAATGA+TGG | - | chr7.4:6675930-6675949 | MS.gene007289:CDS | 40.0% |
| !! | CCATTCTTGATGAGTACTGA+GGG | - | chr7.4:6675993-6676012 | MS.gene007289:CDS | 40.0% |
| AAGACCAAGGAAGGAAAAGC+AGG | - | chr7.4:6675183-6675202 | MS.gene007289:intron | 45.0% | |
| CATACCCCAACAACACTTGA+TGG | + | chr7.4:6676347-6676366 | None:intergenic | 45.0% | |
| CCCTCAGTACTCATCAAGAA+TGG | + | chr7.4:6675996-6676015 | None:intergenic | 45.0% | |
| CGAATTCAGTGGAGTTTGTG+AGG | + | chr7.4:6675371-6675390 | None:intergenic | 45.0% | |
| CGATGATGTGTCGAATTCAG+TGG | + | chr7.4:6675382-6675401 | None:intergenic | 45.0% | |
| GAACATGGCTATCAAAGGAG+TGG | - | chr7.4:6675114-6675133 | MS.gene007289:intron | 45.0% | |
| GGAAAAGCAGGAAGACAAGA+TGG | - | chr7.4:6675195-6675214 | MS.gene007289:intron | 45.0% | |
| GGAGAAGCAAGAAGAATGGT+TGG | - | chr7.4:6675542-6675561 | MS.gene007289:intron | 45.0% | |
| GGGTGTTAAGAGAAGAAGAG+TGG | - | chr7.4:6675604-6675623 | MS.gene007289:CDS | 45.0% | |
| GTACTGAGGGAGGAAATATG+TGG | - | chr7.4:6676006-6676025 | MS.gene007289:CDS | 45.0% | |
| GTTAACAATGGAGATGGAGC+TGG | - | chr7.4:6675870-6675889 | MS.gene007289:CDS | 45.0% | |
| TAGTGGAAGAAGCTTCTGGA+AGG | - | chr7.4:6675476-6675495 | MS.gene007289:intron | 45.0% | |
| TGGTGGAGAAGCAAGAAGAA+TGG | - | chr7.4:6675538-6675557 | MS.gene007289:intron | 45.0% | |
| TGTGGGAGTGAAGATGAAGA+AGG | + | chr7.4:6675276-6675295 | None:intergenic | 45.0% | |
| ! | CCCATTCTTGATGAGTACTG+AGG | - | chr7.4:6675992-6676011 | MS.gene007289:CDS | 45.0% |
| !! | AGCTAGGGATGCTGCTTTAA+TGG | - | chr7.4:6675695-6675714 | MS.gene007289:CDS | 45.0% |
| !! | TCTTCCTGCTTTTCCTTCCT+TGG | + | chr7.4:6675190-6675209 | None:intergenic | 45.0% |
| !! | TTCTTGATGAGTACTGAGGG+AGG | - | chr7.4:6675996-6676015 | MS.gene007289:CDS | 45.0% |
| ! | GGAGTAGTGGAAGAAGCTTC+TGG | - | chr7.4:6675472-6675491 | MS.gene007289:intron | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 6675105 | 6676521 | 6675105 | ID=MS.gene007289 |
| chr7.4 | mRNA | 6675105 | 6676521 | 6675105 | ID=MS.gene007289.t1;Parent=MS.gene007289 |
| chr7.4 | exon | 6675580 | 6676521 | 6675580 | ID=MS.gene007289.t1.exon1;Parent=MS.gene007289.t1 |
| chr7.4 | CDS | 6675580 | 6676521 | 6675580 | ID=cds.MS.gene007289.t1;Parent=MS.gene007289.t1 |
| chr7.4 | exon | 6675248 | 6675289 | 6675248 | ID=MS.gene007289.t1.exon2;Parent=MS.gene007289.t1 |
| chr7.4 | CDS | 6675248 | 6675289 | 6675248 | ID=cds.MS.gene007289.t1;Parent=MS.gene007289.t1 |
| chr7.4 | exon | 6675105 | 6675113 | 6675105 | ID=MS.gene007289.t1.exon3;Parent=MS.gene007289.t1 |
| chr7.4 | CDS | 6675105 | 6675113 | 6675105 | ID=cds.MS.gene007289.t1;Parent=MS.gene007289.t1 |
| Gene Sequence |
| Protein sequence |
