Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007329.t1 | XP_013450070.1 | 97.8 | 414 | 7 | 2 | 1 | 412 | 42 | 455 | 1.50E-152 | 549.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007329.t1 | A0A072U4N3 | 97.8 | 414 | 7 | 2 | 1 | 412 | 42 | 455 | 1.1e-152 | 549.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene007329.t1 | TF | Trihelix |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007329.t1 | MTR_7g103390 | 97.826 | 414 | 7 | 2 | 1 | 412 | 42 | 455 | 0.0 | 823 |
| MS.gene007329.t1 | MTR_1g061640 | 62.181 | 431 | 133 | 8 | 8 | 412 | 70 | 496 | 7.64e-151 | 437 |
| MS.gene007329.t1 | MTR_2g098080 | 40.318 | 377 | 175 | 8 | 32 | 399 | 80 | 415 | 9.66e-79 | 250 |
| MS.gene007329.t1 | MTR_1g098920 | 39.524 | 420 | 198 | 11 | 8 | 398 | 55 | 447 | 1.73e-77 | 247 |
| MS.gene007329.t1 | MTR_6g035315 | 38.200 | 411 | 211 | 9 | 8 | 396 | 53 | 442 | 1.32e-73 | 239 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007329.t1 | AT3G10040 | 46.005 | 413 | 168 | 10 | 6 | 402 | 45 | 418 | 8.09e-101 | 306 |
| MS.gene007329.t1 | AT1G76870 | 50.273 | 183 | 81 | 4 | 7 | 188 | 34 | 207 | 2.60e-55 | 187 |
| MS.gene007329.t1 | AT1G76870 | 50.273 | 183 | 81 | 4 | 7 | 188 | 34 | 207 | 2.60e-55 | 187 |
| MS.gene007329.t1 | AT1G76870 | 50.273 | 183 | 81 | 4 | 7 | 188 | 34 | 207 | 2.60e-55 | 187 |
| MS.gene007329.t1 | AT1G21200 | 57.407 | 162 | 61 | 3 | 32 | 188 | 84 | 242 | 3.52e-55 | 189 |
| MS.gene007329.t1 | AT1G21200 | 57.407 | 162 | 61 | 3 | 32 | 188 | 84 | 242 | 3.52e-55 | 189 |
Find 75 sgRNAs with CRISPR-Local
Find 90 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAAACTTTGTTGGATACTA+TGG | 0.197558 | 7.4:+7887043 | MS.gene007329:CDS |
| TCCAAAGGGATGATGGAAAA+AGG | 0.229973 | 7.4:+7886909 | MS.gene007329:CDS |
| TGGTTTGTTGTTGTTGGTTT+TGG | 0.247414 | 7.4:-7886643 | None:intergenic |
| TGAAAATGAAAGGAAGAGTT+TGG | 0.281655 | 7.4:+7887712 | MS.gene007329:CDS |
| AAAAGAGTTAATGATATTCT+TGG | 0.286176 | 7.4:+7886990 | MS.gene007329:CDS |
| TCAAATGGGGTAGGGAGTTT+AGG | 0.306322 | 7.4:+7887275 | MS.gene007329:CDS |
| GATGAAGACGAACCATGTTT+TGG | 0.321361 | 7.4:+7886690 | MS.gene007329:CDS |
| AAGAAGAGGGTGGTGCAATT+AGG | 0.323802 | 7.4:+7887581 | MS.gene007329:CDS |
| CAATGTTTGCATTCATCAAA+TGG | 0.340659 | 7.4:+7887260 | MS.gene007329:CDS |
| TCAGGAGAAGGTGGTGGTTA+TGG | 0.365147 | 7.4:+7887398 | MS.gene007329:CDS |
| AGCTTCTTCTTTCAACTTTG+CGG | 0.379123 | 7.4:-7887072 | None:intergenic |
| AATGTTTGCATTCATCAAAT+GGG | 0.387098 | 7.4:+7887261 | MS.gene007329:CDS |
| AATGGTAAGACTCTTAATAA+TGG | 0.395318 | 7.4:+7886785 | MS.gene007329:CDS |
| TGTTGAAAATCAAACTTTGT+TGG | 0.398526 | 7.4:+7887034 | MS.gene007329:CDS |
| GAGTTTGGAGATTGATAGAA+TGG | 0.398897 | 7.4:+7887727 | MS.gene007329:CDS |
| ATGAAAATATTGATCACTTA+AGG | 0.402159 | 7.4:+7887441 | MS.gene007329:CDS |
| TTGTTGTGGTTTGTTGTTGT+TGG | 0.407241 | 7.4:-7886649 | None:intergenic |
| TTGAAACTGAAAGGTAGAAA+TGG | 0.413834 | 7.4:+7887302 | MS.gene007329:CDS |
| AATGGTTTGTTACAAAAGAA+AGG | 0.427323 | 7.4:+7886870 | MS.gene007329:CDS |
| TAGTAACAAAGAAAGGGAAA+TGG | 0.428604 | 7.4:+7887676 | MS.gene007329:CDS |
| GTTAATGATATTCTTGGTAA+AGG | 0.448596 | 7.4:+7886996 | MS.gene007329:CDS |
| AGAACAGGTAAACTATCATA+TGG | 0.455868 | 7.4:+7887607 | MS.gene007329:CDS |
| ATCAGTTTCCAAAGGGATGA+TGG | 0.456043 | 7.4:+7886902 | MS.gene007329:CDS |
| GAAGAGGAAGAAGAAGAATC+AGG | 0.456394 | 7.4:+7887380 | MS.gene007329:CDS |
| TGTTACAAAAGAAAGGGAAA+TGG | 0.458567 | 7.4:+7886877 | MS.gene007329:CDS |
| CACCATGGCATAGAATGAAA+TGG | 0.467516 | 7.4:+7886754 | MS.gene007329:CDS |
| GTTGCAAATTGTTGTTTCCA+TGG | 0.468486 | 7.4:-7887160 | None:intergenic |
| TGCTGTTGTTGCTGTTGTTG+TGG | 0.468978 | 7.4:-7887224 | None:intergenic |
| ATGAAGACGAAGATGATGAA+TGG | 0.472682 | 7.4:+7887345 | MS.gene007329:CDS |
| ATAATGGCTGTTTATTACAT+TGG | 0.475736 | 7.4:+7886801 | MS.gene007329:CDS |
| AAGATGGAGTGAAGAGTTGT+TGG | 0.482165 | 7.4:+7887540 | MS.gene007329:CDS |
| TATCATAACAGTTGTGGCCA+TGG | 0.484474 | 7.4:+7887143 | MS.gene007329:CDS |
| TGGAGGAGGAGAAGATGAAG+AGG | 0.485154 | 7.4:+7887322 | MS.gene007329:CDS |
| AATTTAGTAGTAACAAAGAA+AGG | 0.489528 | 7.4:+7887669 | MS.gene007329:CDS |
| ATGGTTTGTTACAAAAGAAA+GGG | 0.489534 | 7.4:+7886871 | MS.gene007329:CDS |
| TGAAGACGAAGATGATGAAT+GGG | 0.490538 | 7.4:+7887346 | MS.gene007329:CDS |
| TGATTGATGAGGTTGATCAT+AGG | 0.498163 | 7.4:-7886595 | None:intergenic |
| GTCCATTTCATTCTATGCCA+TGG | 0.498446 | 7.4:-7886756 | None:intergenic |
| GGTGCAATTAGGAGAAGAAC+AGG | 0.499399 | 7.4:+7887592 | MS.gene007329:CDS |
| AGTTCAATGATTTGAACAAA+AGG | 0.501403 | 7.4:+7886964 | MS.gene007329:CDS |
| AAAAGCAATGGATGAAGAAG+AGG | 0.518548 | 7.4:+7887567 | MS.gene007329:CDS |
| GAAGAATCAGGAGAAGGTGG+TGG | 0.520051 | 7.4:+7887392 | MS.gene007329:CDS |
| AGGTTGATGTTGATTTGTTG+TGG | 0.522948 | 7.4:-7886663 | None:intergenic |
| TGCATTCATCAAATGGGGTA+GGG | 0.525561 | 7.4:+7887267 | MS.gene007329:CDS |
| GAAGAAGAATCAGGAGAAGG+TGG | 0.525982 | 7.4:+7887389 | MS.gene007329:CDS |
| AGGTGGTGGTTATGGTTCAA+AGG | 0.527876 | 7.4:+7887406 | MS.gene007329:CDS |
| TTAGGAATGTTGAAACTGAA+AGG | 0.528480 | 7.4:+7887293 | MS.gene007329:CDS |
| ATTTAGTAGTAACAAAGAAA+GGG | 0.534556 | 7.4:+7887670 | MS.gene007329:CDS |
| GGTGGTGGTTATGGTTCAAA+GGG | 0.537283 | 7.4:+7887407 | MS.gene007329:CDS |
| TTGCATTCATCAAATGGGGT+AGG | 0.539537 | 7.4:+7887266 | MS.gene007329:CDS |
| GTTTCATCTGCTCCAAAACA+TGG | 0.550664 | 7.4:-7886702 | None:intergenic |
| ATGGGAGGATGATTCTGAAG+AGG | 0.551198 | 7.4:+7887364 | MS.gene007329:CDS |
| CTGAAAGGTAGAAATGGAGG+AGG | 0.556127 | 7.4:+7887308 | MS.gene007329:CDS |
| TATTACATTGGTGATGAAGC+TGG | 0.558817 | 7.4:+7886813 | MS.gene007329:CDS |
| AATGGAAATCAGTTTCCAAA+GGG | 0.568552 | 7.4:+7886895 | MS.gene007329:CDS |
| TGTGGATGATGATGTTGCAG+TGG | 0.570238 | 7.4:-7887206 | None:intergenic |
| AACTGTTGCATCACTTGTGA+TGG | 0.574352 | 7.4:-7887491 | None:intergenic |
| AGATGGAGTGAAGAGTTGTT+GGG | 0.577842 | 7.4:+7887541 | MS.gene007329:CDS |
| GAAGAAGAAGAATCAGGAGA+AGG | 0.578759 | 7.4:+7887386 | MS.gene007329:CDS |
| CCTTGTTTGATTGATTGATG+AGG | 0.589884 | 7.4:-7886606 | None:intergenic |
| GTGATGAGTGTGTTGCAAGA+TGG | 0.590136 | 7.4:+7887524 | MS.gene007329:CDS |
| AAAGCAATGGATGAAGAAGA+GGG | 0.598249 | 7.4:+7887568 | MS.gene007329:CDS |
| CAGTGGTTGAGTCTCAGTTG+AGG | 0.599148 | 7.4:-7887189 | None:intergenic |
| AAACTGAAAGGTAGAAATGG+AGG | 0.600866 | 7.4:+7887305 | MS.gene007329:CDS |
| CCTCATCAATCAATCAAACA+AGG | 0.605701 | 7.4:+7886606 | MS.gene007329:CDS |
| AATGAAATGGACAGATACAA+TGG | 0.606746 | 7.4:+7886767 | MS.gene007329:CDS |
| TTTGGAGCAGATGAAACCTC+TGG | 0.607202 | 7.4:+7886708 | MS.gene007329:CDS |
| AAATGGAAATCAGTTTCCAA+AGG | 0.612879 | 7.4:+7886894 | MS.gene007329:CDS |
| AACTTGTCTTCACATTGTTG+AGG | 0.613435 | 7.4:-7886945 | None:intergenic |
| AGACGAAGATGATGAATGGG+AGG | 0.633418 | 7.4:+7887349 | MS.gene007329:CDS |
| ATGTTTGCATTCATCAAATG+GGG | 0.639039 | 7.4:+7887262 | MS.gene007329:CDS |
| TGTGCTTATCATAACAGTTG+TGG | 0.669194 | 7.4:+7887137 | MS.gene007329:CDS |
| GGAGCAGATGAAACCTCTGG+TGG | 0.717638 | 7.4:+7886711 | MS.gene007329:CDS |
| ATGGTTCGTCTTCATCACTG+AGG | 0.747243 | 7.4:-7886683 | None:intergenic |
| GCAATGGATGAAGAAGAGGG+TGG | 0.776790 | 7.4:+7887571 | MS.gene007329:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAGAGTTAATGATATTCT+TGG | + | chr7.4:7886990-7887009 | MS.gene007329:CDS | 20.0% |
| !! | AATTTAGTAGTAACAAAGAA+AGG | + | chr7.4:7887669-7887688 | MS.gene007329:CDS | 20.0% |
| !! | ATGAAAATATTGATCACTTA+AGG | + | chr7.4:7887441-7887460 | MS.gene007329:CDS | 20.0% |
| !! | ATTTAGTAGTAACAAAGAAA+GGG | + | chr7.4:7887670-7887689 | MS.gene007329:CDS | 20.0% |
| ! | AATGGTAAGACTCTTAATAA+TGG | + | chr7.4:7886785-7886804 | MS.gene007329:CDS | 25.0% |
| ! | AATGTTTGCATTCATCAAAT+GGG | + | chr7.4:7887261-7887280 | MS.gene007329:CDS | 25.0% |
| ! | AGTTCAATGATTTGAACAAA+AGG | + | chr7.4:7886964-7886983 | MS.gene007329:CDS | 25.0% |
| ! | ATAATGGCTGTTTATTACAT+TGG | + | chr7.4:7886801-7886820 | MS.gene007329:CDS | 25.0% |
| ! | GACAAAAACTTGAAAATGAA+AGG | + | chr7.4:7887702-7887721 | MS.gene007329:CDS | 25.0% |
| ! | GTTAATGATATTCTTGGTAA+AGG | + | chr7.4:7886996-7887015 | MS.gene007329:CDS | 25.0% |
| ! | TGAAAAACAAAGGTTGAAAT+GGG | + | chr7.4:7887643-7887662 | MS.gene007329:CDS | 25.0% |
| ! | TGTTGAAAATCAAACTTTGT+TGG | + | chr7.4:7887034-7887053 | MS.gene007329:CDS | 25.0% |
| ! | TTGAAAAACAAAGGTTGAAA+TGG | + | chr7.4:7887642-7887661 | MS.gene007329:CDS | 25.0% |
| !! | CATTTGAGATTGAAAAACAA+AGG | + | chr7.4:7887633-7887652 | MS.gene007329:CDS | 25.0% |
| !!! | AATGGTTTGTTACAAAAGAA+AGG | + | chr7.4:7886870-7886889 | MS.gene007329:CDS | 25.0% |
| !!! | ATGGTTTGTTACAAAAGAAA+GGG | + | chr7.4:7886871-7886890 | MS.gene007329:CDS | 25.0% |
| AAATGGAAATCAGTTTCCAA+AGG | + | chr7.4:7886894-7886913 | MS.gene007329:CDS | 30.0% | |
| AATGAAATGGACAGATACAA+TGG | + | chr7.4:7886767-7886786 | MS.gene007329:CDS | 30.0% | |
| AATGGAAATCAGTTTCCAAA+GGG | + | chr7.4:7886895-7886914 | MS.gene007329:CDS | 30.0% | |
| AGAACAGGTAAACTATCATA+TGG | + | chr7.4:7887607-7887626 | MS.gene007329:CDS | 30.0% | |
| ATGTTTGCATTCATCAAATG+GGG | + | chr7.4:7887262-7887281 | MS.gene007329:CDS | 30.0% | |
| CAATGTTTGCATTCATCAAA+TGG | + | chr7.4:7887260-7887279 | MS.gene007329:CDS | 30.0% | |
| GCTGATAAAAAGAAAGCTAA+TGG | + | chr7.4:7886852-7886871 | MS.gene007329:CDS | 30.0% | |
| TAGTAACAAAGAAAGGGAAA+TGG | + | chr7.4:7887676-7887695 | MS.gene007329:CDS | 30.0% | |
| TCAAACTTTGTTGGATACTA+TGG | + | chr7.4:7887043-7887062 | MS.gene007329:CDS | 30.0% | |
| TGAAAATGAAAGGAAGAGTT+TGG | + | chr7.4:7887712-7887731 | MS.gene007329:CDS | 30.0% | |
| TGTTACAAAAGAAAGGGAAA+TGG | + | chr7.4:7886877-7886896 | MS.gene007329:CDS | 30.0% | |
| TTAGGAATGTTGAAACTGAA+AGG | + | chr7.4:7887293-7887312 | MS.gene007329:CDS | 30.0% | |
| TTGAAACTGAAAGGTAGAAA+TGG | + | chr7.4:7887302-7887321 | MS.gene007329:CDS | 30.0% | |
| ! | ATGGTGATCCTTTTCTTTTT+GGG | - | chr7.4:7886740-7886759 | None:intergenic | 30.0% |
| !!! | TGTTGGTTTTGGATGAATAA+GGG | - | chr7.4:7886635-7886654 | None:intergenic | 30.0% |
| !!! | TTGTTGGTTTTGGATGAATA+AGG | - | chr7.4:7886636-7886655 | None:intergenic | 30.0% |
| AAAAGCAATGGATGAAGAAG+AGG | + | chr7.4:7887567-7887586 | MS.gene007329:CDS | 35.0% | |
| AAACTGAAAGGTAGAAATGG+AGG | + | chr7.4:7887305-7887324 | MS.gene007329:CDS | 35.0% | |
| AAAGCAATGGATGAAGAAGA+GGG | + | chr7.4:7887568-7887587 | MS.gene007329:CDS | 35.0% | |
| AACTTGTCTTCACATTGTTG+AGG | - | chr7.4:7886948-7886967 | None:intergenic | 35.0% | |
| AGCTTCTTCTTTCAACTTTG+CGG | - | chr7.4:7887075-7887094 | None:intergenic | 35.0% | |
| ATGAAGACGAAGATGATGAA+TGG | + | chr7.4:7887345-7887364 | MS.gene007329:CDS | 35.0% | |
| CAAAAAGAAAAGGATCACCA+TGG | + | chr7.4:7886739-7886758 | MS.gene007329:CDS | 35.0% | |
| CCTCATCAATCAATCAAACA+AGG | + | chr7.4:7886606-7886625 | MS.gene007329:CDS | 35.0% | |
| GAGTTTGGAGATTGATAGAA+TGG | + | chr7.4:7887727-7887746 | MS.gene007329:CDS | 35.0% | |
| TGAAGACGAAGATGATGAAT+GGG | + | chr7.4:7887346-7887365 | MS.gene007329:CDS | 35.0% | |
| TGTGCTTATCATAACAGTTG+TGG | + | chr7.4:7887137-7887156 | MS.gene007329:CDS | 35.0% | |
| ! | CATGGTGATCCTTTTCTTTT+TGG | - | chr7.4:7886741-7886760 | None:intergenic | 35.0% |
| ! | CCTTGTTTGATTGATTGATG+AGG | - | chr7.4:7886609-7886628 | None:intergenic | 35.0% |
| ! | TGATTGATGAGGTTGATCAT+AGG | - | chr7.4:7886598-7886617 | None:intergenic | 35.0% |
| !! | AGGTTGATGTTGATTTGTTG+TGG | - | chr7.4:7886666-7886685 | None:intergenic | 35.0% |
| !! | GTTGCAAATTGTTGTTTCCA+TGG | - | chr7.4:7887163-7887182 | None:intergenic | 35.0% |
| !! | TATTACATTGGTGATGAAGC+TGG | + | chr7.4:7886813-7886832 | MS.gene007329:CDS | 35.0% |
| !! | TTGTTGTGGTTTGTTGTTGT+TGG | - | chr7.4:7886652-7886671 | None:intergenic | 35.0% |
| !!! | TGGTTTGTTGTTGTTGGTTT+TGG | - | chr7.4:7886646-7886665 | None:intergenic | 35.0% |
| AACTGTTGCATCACTTGTGA+TGG | - | chr7.4:7887494-7887513 | None:intergenic | 40.0% | |
| AAGATGGAGTGAAGAGTTGT+TGG | + | chr7.4:7887540-7887559 | MS.gene007329:CDS | 40.0% | |
| AGATGGAGTGAAGAGTTGTT+GGG | + | chr7.4:7887541-7887560 | MS.gene007329:CDS | 40.0% | |
| ATCAGTTTCCAAAGGGATGA+TGG | + | chr7.4:7886902-7886921 | MS.gene007329:CDS | 40.0% | |
| CACCATGGCATAGAATGAAA+TGG | + | chr7.4:7886754-7886773 | MS.gene007329:CDS | 40.0% | |
| GAAGAAGAAGAATCAGGAGA+AGG | + | chr7.4:7887386-7887405 | MS.gene007329:CDS | 40.0% | |
| GAAGAGGAAGAAGAAGAATC+AGG | + | chr7.4:7887380-7887399 | MS.gene007329:CDS | 40.0% | |
| GTCCATTTCATTCTATGCCA+TGG | - | chr7.4:7886759-7886778 | None:intergenic | 40.0% | |
| GTTGTTGGGAGAAAAAGCAA+TGG | + | chr7.4:7887555-7887574 | MS.gene007329:CDS | 40.0% | |
| GTTTCATCTGCTCCAAAACA+TGG | - | chr7.4:7886705-7886724 | None:intergenic | 40.0% | |
| TATCATAACAGTTGTGGCCA+TGG | + | chr7.4:7887143-7887162 | MS.gene007329:CDS | 40.0% | |
| TGCATTCATCAAATGGGGTA+GGG | + | chr7.4:7887267-7887286 | MS.gene007329:CDS | 40.0% | |
| TTGCATTCATCAAATGGGGT+AGG | + | chr7.4:7887266-7887285 | MS.gene007329:CDS | 40.0% | |
| ! | GATGAAGACGAACCATGTTT+TGG | + | chr7.4:7886690-7886709 | MS.gene007329:CDS | 40.0% |
| !! | CCAAAGGGATGATGGAAAAA+GGG | + | chr7.4:7886910-7886929 | MS.gene007329:CDS | 40.0% |
| !! | TCCAAAGGGATGATGGAAAA+AGG | + | chr7.4:7886909-7886928 | MS.gene007329:CDS | 40.0% |
| AAGAAGAGGGTGGTGCAATT+AGG | + | chr7.4:7887581-7887600 | MS.gene007329:CDS | 45.0% | |
| AGACGAAGATGATGAATGGG+AGG | + | chr7.4:7887349-7887368 | MS.gene007329:CDS | 45.0% | |
| ATGGTTCGTCTTCATCACTG+AGG | - | chr7.4:7886686-7886705 | None:intergenic | 45.0% | |
| CTGAAAGGTAGAAATGGAGG+AGG | + | chr7.4:7887308-7887327 | MS.gene007329:CDS | 45.0% | |
| GAAGAAGAATCAGGAGAAGG+TGG | + | chr7.4:7887389-7887408 | MS.gene007329:CDS | 45.0% | |
| GGTGCAATTAGGAGAAGAAC+AGG | + | chr7.4:7887592-7887611 | MS.gene007329:CDS | 45.0% | |
| GGTGGTGACCCAAAAAGAAA+AGG | + | chr7.4:7886729-7886748 | MS.gene007329:CDS | 45.0% | |
| GTGATGAGTGTGTTGCAAGA+TGG | + | chr7.4:7887524-7887543 | MS.gene007329:CDS | 45.0% | |
| TCAAATGGGGTAGGGAGTTT+AGG | + | chr7.4:7887275-7887294 | MS.gene007329:CDS | 45.0% | |
| ! | AGGTGGTGGTTATGGTTCAA+AGG | + | chr7.4:7887406-7887425 | MS.gene007329:CDS | 45.0% |
| ! | ATGGGAGGATGATTCTGAAG+AGG | + | chr7.4:7887364-7887383 | MS.gene007329:CDS | 45.0% |
| ! | CCCTTTTTCCATCATCCCTT+TGG | - | chr7.4:7886913-7886932 | None:intergenic | 45.0% |
| ! | GGTGGTGGTTATGGTTCAAA+GGG | + | chr7.4:7887407-7887426 | MS.gene007329:CDS | 45.0% |
| ! | TGCTGTTGTTGCTGTTGTTG+TGG | - | chr7.4:7887227-7887246 | None:intergenic | 45.0% |
| ! | TGTGGATGATGATGTTGCAG+TGG | - | chr7.4:7887209-7887228 | None:intergenic | 45.0% |
| ! | TTTGGAGCAGATGAAACCTC+TGG | + | chr7.4:7886708-7886727 | MS.gene007329:CDS | 45.0% |
| CAGTGGTTGAGTCTCAGTTG+AGG | - | chr7.4:7887192-7887211 | None:intergenic | 50.0% | |
| GAAGAATCAGGAGAAGGTGG+TGG | + | chr7.4:7887392-7887411 | MS.gene007329:CDS | 50.0% | |
| GCAATGGATGAAGAAGAGGG+TGG | + | chr7.4:7887571-7887590 | MS.gene007329:CDS | 50.0% | |
| TGGAGGAGGAGAAGATGAAG+AGG | + | chr7.4:7887322-7887341 | MS.gene007329:CDS | 50.0% | |
| ! | TCAGGAGAAGGTGGTGGTTA+TGG | + | chr7.4:7887398-7887417 | MS.gene007329:CDS | 50.0% |
| !!! | TCTTTTTGGGTCACCACCAG+AGG | - | chr7.4:7886727-7886746 | None:intergenic | 50.0% |
| GGAGCAGATGAAACCTCTGG+TGG | + | chr7.4:7886711-7886730 | MS.gene007329:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 7886588 | 7887826 | 7886588 | ID=MS.gene007329 |
| chr7.4 | mRNA | 7886588 | 7887826 | 7886588 | ID=MS.gene007329.t1;Parent=MS.gene007329 |
| chr7.4 | exon | 7886588 | 7887826 | 7886588 | ID=MS.gene007329.t1.exon1;Parent=MS.gene007329.t1 |
| chr7.4 | CDS | 7886588 | 7887826 | 7886588 | ID=cds.MS.gene007329.t1;Parent=MS.gene007329.t1 |
| Gene Sequence |
| Protein sequence |