Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene007442.t1 | XP_003625606.1 | 98.2 | 328 | 6 | 0 | 1 | 328 | 1 | 328 | 3.10E-188 | 667.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene007442.t1 | O49255 | 66.5 | 164 | 53 | 1 | 7 | 170 | 5 | 166 | 2.4e-64 | 247.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene007442.t1 | G7L2R0 | 98.2 | 328 | 6 | 0 | 1 | 328 | 1 | 328 | 2.2e-188 | 667.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene007442.t1 | TF | NAC |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene007442.t1 | MTR_7g100990 | 98.171 | 328 | 6 | 0 | 1 | 328 | 1 | 328 | 0.0 | 672 |
MS.gene007442.t1 | MTR_2g093810 | 52.234 | 291 | 126 | 5 | 7 | 286 | 10 | 298 | 2.47e-93 | 280 |
MS.gene007442.t1 | MTR_2g080010 | 63.128 | 179 | 59 | 1 | 11 | 182 | 15 | 193 | 1.27e-81 | 251 |
MS.gene007442.t1 | MTR_7g085220 | 50.562 | 267 | 101 | 7 | 8 | 243 | 5 | 271 | 2.99e-81 | 250 |
MS.gene007442.t1 | MTR_4g089135 | 64.045 | 178 | 45 | 2 | 10 | 168 | 14 | 191 | 4.12e-78 | 242 |
MS.gene007442.t1 | MTR_4g081870 | 62.234 | 188 | 61 | 3 | 10 | 195 | 8 | 187 | 4.91e-78 | 239 |
MS.gene007442.t1 | MTR_2157s0010 | 58.854 | 192 | 70 | 3 | 6 | 188 | 3 | 194 | 1.34e-77 | 238 |
MS.gene007442.t1 | MTR_5g041940 | 66.871 | 163 | 52 | 1 | 9 | 171 | 1 | 161 | 4.10e-77 | 237 |
MS.gene007442.t1 | MTR_3g088110 | 64.198 | 162 | 54 | 2 | 7 | 168 | 3 | 160 | 2.62e-72 | 226 |
MS.gene007442.t1 | MTR_2g079990 | 62.130 | 169 | 58 | 3 | 2 | 170 | 7 | 169 | 1.14e-70 | 223 |
MS.gene007442.t1 | MTR_8g094580 | 49.573 | 234 | 103 | 5 | 9 | 235 | 5 | 230 | 5.84e-70 | 219 |
MS.gene007442.t1 | MTR_8g059170 | 61.677 | 167 | 60 | 3 | 2 | 168 | 5 | 167 | 2.72e-67 | 214 |
MS.gene007442.t1 | MTR_2g079990 | 54.404 | 193 | 62 | 4 | 2 | 170 | 7 | 197 | 8.97e-66 | 212 |
MS.gene007442.t1 | MTR_3g096920 | 56.790 | 162 | 66 | 2 | 6 | 167 | 2 | 159 | 9.92e-64 | 204 |
MS.gene007442.t1 | MTR_3g109340 | 45.249 | 221 | 106 | 3 | 1 | 211 | 12 | 227 | 1.62e-60 | 197 |
MS.gene007442.t1 | MTR_3g109340 | 45.249 | 221 | 105 | 3 | 1 | 211 | 12 | 226 | 3.21e-60 | 197 |
MS.gene007442.t1 | MTR_3g096920 | 47.475 | 198 | 65 | 3 | 6 | 167 | 2 | 196 | 5.59e-58 | 190 |
MS.gene007442.t1 | MTR_4g108760 | 55.152 | 165 | 70 | 3 | 8 | 172 | 14 | 174 | 9.55e-57 | 188 |
MS.gene007442.t1 | MTR_1g008740 | 53.012 | 166 | 72 | 2 | 1 | 165 | 17 | 177 | 3.38e-56 | 186 |
MS.gene007442.t1 | MTR_1g008740 | 53.012 | 166 | 72 | 2 | 1 | 165 | 3 | 163 | 4.10e-56 | 186 |
MS.gene007442.t1 | MTR_6g084430 | 55.063 | 158 | 63 | 2 | 8 | 165 | 2 | 151 | 4.32e-56 | 185 |
MS.gene007442.t1 | MTR_6g012670 | 54.878 | 164 | 70 | 2 | 2 | 165 | 11 | 170 | 4.51e-56 | 185 |
MS.gene007442.t1 | MTR_2g078700 | 56.329 | 158 | 67 | 1 | 8 | 165 | 20 | 175 | 2.08e-55 | 185 |
MS.gene007442.t1 | MTR_7g005280 | 54.777 | 157 | 62 | 2 | 6 | 162 | 10 | 157 | 4.59e-55 | 180 |
MS.gene007442.t1 | MTR_5g040420 | 53.125 | 160 | 71 | 2 | 13 | 168 | 16 | 175 | 5.84e-55 | 184 |
MS.gene007442.t1 | MTR_3g435150 | 56.329 | 158 | 65 | 3 | 8 | 165 | 13 | 166 | 1.28e-53 | 178 |
MS.gene007442.t1 | MTR_6g011860 | 51.515 | 165 | 70 | 3 | 11 | 168 | 15 | 176 | 2.91e-53 | 179 |
MS.gene007442.t1 | MTR_8g467490 | 50.595 | 168 | 73 | 4 | 8 | 168 | 12 | 176 | 3.75e-53 | 179 |
MS.gene007442.t1 | MTR_6g477900 | 41.935 | 217 | 105 | 5 | 7 | 220 | 2 | 200 | 2.48e-52 | 172 |
MS.gene007442.t1 | MTR_3g070030 | 51.190 | 168 | 79 | 2 | 3 | 170 | 11 | 175 | 3.38e-52 | 176 |
MS.gene007442.t1 | MTR_7g085260 | 51.497 | 167 | 77 | 3 | 1 | 165 | 7 | 171 | 5.88e-52 | 176 |
MS.gene007442.t1 | MTR_2g062730 | 39.823 | 226 | 119 | 5 | 8 | 226 | 7 | 222 | 4.75e-51 | 172 |
MS.gene007442.t1 | MTR_4g036030 | 40.000 | 240 | 119 | 6 | 10 | 244 | 6 | 225 | 5.52e-50 | 170 |
MS.gene007442.t1 | MTR_3g116070 | 55.102 | 147 | 65 | 1 | 2 | 147 | 14 | 160 | 6.02e-50 | 170 |
MS.gene007442.t1 | MTR_2g064090 | 49.686 | 159 | 73 | 3 | 9 | 165 | 4 | 157 | 1.56e-49 | 169 |
MS.gene007442.t1 | MTR_2g064470 | 51.572 | 159 | 62 | 4 | 8 | 162 | 8 | 155 | 3.73e-49 | 166 |
MS.gene007442.t1 | MTR_5g090970 | 47.701 | 174 | 84 | 5 | 1 | 168 | 9 | 181 | 3.74e-49 | 167 |
MS.gene007442.t1 | MTR_5g021710 | 49.068 | 161 | 71 | 3 | 8 | 165 | 5 | 157 | 4.66e-49 | 167 |
MS.gene007442.t1 | MTR_4g101680 | 49.057 | 159 | 70 | 3 | 10 | 165 | 6 | 156 | 5.02e-49 | 168 |
MS.gene007442.t1 | MTR_5g076850 | 50.314 | 159 | 71 | 4 | 9 | 165 | 4 | 156 | 5.75e-49 | 173 |
MS.gene007442.t1 | MTR_6g032770 | 51.299 | 154 | 73 | 2 | 9 | 162 | 16 | 167 | 7.04e-49 | 168 |
MS.gene007442.t1 | MTR_3g064580 | 49.686 | 159 | 73 | 4 | 9 | 165 | 4 | 157 | 2.35e-48 | 172 |
MS.gene007442.t1 | MTR_5g012080 | 48.428 | 159 | 71 | 4 | 11 | 165 | 7 | 158 | 2.80e-48 | 166 |
MS.gene007442.t1 | MTR_8g099750 | 48.447 | 161 | 78 | 3 | 10 | 167 | 13 | 171 | 3.47e-48 | 161 |
MS.gene007442.t1 | MTR_5g090970 | 47.701 | 174 | 83 | 6 | 1 | 168 | 9 | 180 | 5.22e-48 | 164 |
MS.gene007442.t1 | MTR_4g035590 | 50.633 | 158 | 66 | 3 | 11 | 165 | 8 | 156 | 8.92e-48 | 164 |
MS.gene007442.t1 | MTR_8g024480 | 46.951 | 164 | 77 | 3 | 10 | 165 | 14 | 175 | 1.12e-47 | 166 |
MS.gene007442.t1 | MTR_8g076110 | 46.154 | 182 | 82 | 5 | 11 | 185 | 6 | 178 | 2.78e-47 | 162 |
MS.gene007442.t1 | MTR_1g069805 | 47.742 | 155 | 73 | 1 | 11 | 165 | 10 | 156 | 3.89e-47 | 160 |
MS.gene007442.t1 | MTR_4g134460 | 49.383 | 162 | 75 | 2 | 6 | 167 | 49 | 203 | 4.06e-47 | 164 |
MS.gene007442.t1 | MTR_7g011130 | 47.701 | 174 | 78 | 3 | 3 | 165 | 11 | 182 | 5.15e-47 | 162 |
MS.gene007442.t1 | MTR_2g068880 | 40.191 | 209 | 108 | 5 | 13 | 204 | 24 | 232 | 1.17e-46 | 160 |
MS.gene007442.t1 | MTR_7g097090 | 48.684 | 152 | 70 | 1 | 11 | 162 | 10 | 153 | 2.38e-46 | 159 |
MS.gene007442.t1 | MTR_7g011120 | 49.080 | 163 | 76 | 3 | 8 | 165 | 5 | 165 | 1.31e-45 | 157 |
MS.gene007442.t1 | MTR_2g068920 | 42.697 | 178 | 92 | 3 | 13 | 180 | 23 | 200 | 1.48e-45 | 157 |
MS.gene007442.t1 | MTR_8g094580 | 48.087 | 183 | 80 | 5 | 60 | 235 | 2 | 176 | 1.53e-45 | 155 |
MS.gene007442.t1 | MTR_1g096430 | 45.963 | 161 | 76 | 3 | 8 | 165 | 4 | 156 | 2.18e-45 | 157 |
MS.gene007442.t1 | MTR_4g098630 | 43.979 | 191 | 91 | 5 | 11 | 190 | 6 | 191 | 6.77e-45 | 155 |
MS.gene007442.t1 | MTR_5g014300 | 37.262 | 263 | 130 | 8 | 11 | 247 | 6 | 259 | 9.68e-45 | 156 |
MS.gene007442.t1 | MTR_3g096140 | 39.303 | 201 | 97 | 6 | 13 | 199 | 9 | 198 | 1.94e-44 | 153 |
MS.gene007442.t1 | MTR_3g096140 | 39.303 | 201 | 97 | 6 | 13 | 199 | 9 | 198 | 1.24e-43 | 153 |
MS.gene007442.t1 | MTR_4g075980 | 45.238 | 168 | 82 | 2 | 2 | 168 | 6 | 164 | 1.19e-42 | 149 |
MS.gene007442.t1 | MTR_3g098810 | 47.500 | 160 | 78 | 3 | 10 | 165 | 13 | 170 | 6.91e-42 | 145 |
MS.gene007442.t1 | MTR_2g086880 | 42.932 | 191 | 88 | 5 | 13 | 195 | 20 | 197 | 1.07e-41 | 152 |
MS.gene007442.t1 | MTR_0036s0150 | 43.005 | 193 | 97 | 6 | 13 | 201 | 7 | 190 | 1.15e-41 | 152 |
MS.gene007442.t1 | MTR_1g090723 | 45.625 | 160 | 76 | 5 | 13 | 168 | 10 | 162 | 1.39e-41 | 153 |
MS.gene007442.t1 | MTR_2g086880 | 42.932 | 191 | 88 | 5 | 13 | 195 | 20 | 197 | 2.04e-41 | 152 |
MS.gene007442.t1 | MTR_5g069030 | 38.247 | 251 | 132 | 8 | 10 | 251 | 24 | 260 | 3.32e-41 | 152 |
MS.gene007442.t1 | MTR_1g090723 | 45.625 | 160 | 75 | 5 | 13 | 168 | 10 | 161 | 5.69e-41 | 150 |
MS.gene007442.t1 | MTR_1g090723 | 45.625 | 160 | 75 | 5 | 13 | 168 | 10 | 161 | 6.36e-41 | 151 |
MS.gene007442.t1 | MTR_3g070040 | 46.203 | 158 | 80 | 2 | 8 | 165 | 5 | 157 | 2.21e-40 | 144 |
MS.gene007442.t1 | MTR_1g090720 | 46.061 | 165 | 81 | 4 | 11 | 169 | 42 | 204 | 2.23e-40 | 147 |
MS.gene007442.t1 | MTR_3g093050 | 43.750 | 192 | 96 | 5 | 11 | 200 | 22 | 203 | 3.73e-40 | 149 |
MS.gene007442.t1 | MTR_3g093050 | 43.750 | 192 | 96 | 5 | 11 | 200 | 22 | 203 | 3.95e-40 | 148 |
MS.gene007442.t1 | MTR_1g097300 | 43.312 | 157 | 81 | 3 | 13 | 167 | 21 | 171 | 1.08e-39 | 147 |
MS.gene007442.t1 | MTR_8g063550 | 41.071 | 168 | 90 | 4 | 10 | 174 | 5 | 166 | 1.44e-39 | 142 |
MS.gene007442.t1 | MTR_8g063550 | 41.071 | 168 | 90 | 4 | 10 | 174 | 5 | 166 | 2.10e-39 | 144 |
MS.gene007442.t1 | MTR_8g063550 | 42.073 | 164 | 86 | 4 | 10 | 170 | 5 | 162 | 2.41e-39 | 144 |
MS.gene007442.t1 | MTR_3g093040 | 40.102 | 197 | 99 | 4 | 7 | 201 | 104 | 283 | 4.21e-39 | 140 |
MS.gene007442.t1 | MTR_3g098810 | 47.368 | 152 | 76 | 2 | 10 | 159 | 13 | 162 | 5.01e-39 | 136 |
MS.gene007442.t1 | MTR_8g093580 | 38.424 | 203 | 101 | 8 | 10 | 195 | 5 | 200 | 1.70e-38 | 142 |
MS.gene007442.t1 | MTR_3g096140 | 36.702 | 188 | 94 | 6 | 26 | 199 | 1 | 177 | 1.16e-34 | 129 |
MS.gene007442.t1 | MTR_8g023840 | 41.718 | 163 | 77 | 6 | 5 | 162 | 6 | 155 | 1.15e-33 | 128 |
MS.gene007442.t1 | MTR_4g052620 | 39.691 | 194 | 102 | 7 | 11 | 196 | 5 | 191 | 1.26e-33 | 124 |
MS.gene007442.t1 | MTR_4g094302 | 39.490 | 157 | 85 | 2 | 11 | 165 | 11 | 159 | 8.60e-33 | 120 |
MS.gene007442.t1 | MTR_7g105170 | 38.690 | 168 | 95 | 4 | 11 | 171 | 4 | 170 | 3.53e-32 | 120 |
MS.gene007442.t1 | MTR_8g023860 | 39.744 | 156 | 81 | 5 | 10 | 162 | 11 | 156 | 8.13e-32 | 123 |
MS.gene007442.t1 | MTR_8g023930 | 33.981 | 206 | 121 | 6 | 11 | 213 | 24 | 217 | 1.01e-31 | 124 |
MS.gene007442.t1 | MTR_4g094302 | 41.406 | 128 | 67 | 1 | 11 | 138 | 11 | 130 | 3.18e-31 | 115 |
MS.gene007442.t1 | MTR_8g023900 | 40.385 | 156 | 80 | 5 | 14 | 166 | 196 | 341 | 4.37e-31 | 122 |
MS.gene007442.t1 | MTR_8g023900 | 38.608 | 158 | 86 | 5 | 11 | 165 | 12 | 161 | 3.84e-30 | 119 |
MS.gene007442.t1 | MTR_2g086690 | 42.169 | 166 | 82 | 7 | 12 | 168 | 5 | 165 | 4.71e-30 | 115 |
MS.gene007442.t1 | MTR_8g093790 | 39.623 | 159 | 70 | 5 | 7 | 165 | 6 | 138 | 6.20e-27 | 105 |
MS.gene007442.t1 | MTR_8g023880 | 35.260 | 173 | 81 | 6 | 11 | 166 | 7 | 165 | 3.22e-23 | 97.1 |
MS.gene007442.t1 | MTR_7g070140 | 47.778 | 90 | 41 | 1 | 64 | 153 | 17 | 100 | 7.96e-23 | 92.4 |
MS.gene007442.t1 | MTR_3g096400 | 34.524 | 168 | 86 | 8 | 9 | 164 | 5 | 160 | 4.86e-22 | 92.4 |
MS.gene007442.t1 | MTR_7g116460 | 32.911 | 158 | 89 | 6 | 17 | 166 | 11 | 159 | 6.74e-17 | 78.6 |
MS.gene007442.t1 | MTR_7g083360 | 30.714 | 140 | 88 | 5 | 6 | 140 | 5 | 140 | 1.68e-16 | 75.9 |
MS.gene007442.t1 | MTR_1g045470 | 34.615 | 156 | 81 | 7 | 19 | 164 | 13 | 157 | 1.37e-15 | 76.6 |
MS.gene007442.t1 | MTR_7g083330 | 32.308 | 130 | 82 | 4 | 9 | 136 | 16 | 141 | 6.18e-15 | 72.8 |
MS.gene007442.t1 | MTR_7g083370 | 29.252 | 147 | 92 | 5 | 8 | 152 | 7 | 143 | 3.01e-14 | 69.3 |
MS.gene007442.t1 | MTR_7g070150 | 52.830 | 53 | 18 | 2 | 110 | 162 | 9 | 54 | 3.43e-13 | 65.1 |
MS.gene007442.t1 | MTR_1g087190 | 54.167 | 48 | 19 | 2 | 13 | 58 | 7 | 53 | 4.01e-11 | 58.2 |
MS.gene007442.t1 | MTR_8g102240 | 31.373 | 153 | 79 | 6 | 9 | 138 | 45 | 194 | 6.25e-11 | 63.5 |
MS.gene007442.t1 | MTR_8g102240 | 31.373 | 153 | 79 | 6 | 9 | 138 | 45 | 194 | 6.26e-11 | 63.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene007442.t1 | AT1G69490 | 66.463 | 164 | 53 | 1 | 7 | 170 | 5 | 166 | 6.41e-80 | 244 |
MS.gene007442.t1 | AT1G61110 | 65.318 | 173 | 51 | 2 | 10 | 174 | 15 | 186 | 2.55e-78 | 242 |
MS.gene007442.t1 | AT3G04070 | 62.921 | 178 | 58 | 3 | 1 | 172 | 2 | 177 | 2.19e-75 | 235 |
MS.gene007442.t1 | AT3G15510 | 45.455 | 264 | 115 | 5 | 15 | 253 | 21 | 280 | 1.68e-74 | 234 |
MS.gene007442.t1 | AT3G04070 | 59.278 | 194 | 55 | 4 | 1 | 172 | 2 | 193 | 8.65e-74 | 232 |
MS.gene007442.t1 | AT1G01720 | 64.596 | 161 | 52 | 2 | 9 | 168 | 5 | 161 | 1.78e-71 | 223 |
MS.gene007442.t1 | AT1G77450 | 46.275 | 255 | 119 | 5 | 7 | 257 | 6 | 246 | 4.18e-71 | 221 |
MS.gene007442.t1 | AT4G27410 | 60.465 | 172 | 61 | 4 | 2 | 172 | 5 | 170 | 1.09e-69 | 219 |
MS.gene007442.t1 | AT5G08790 | 62.577 | 163 | 57 | 2 | 7 | 168 | 3 | 162 | 2.06e-68 | 216 |
MS.gene007442.t1 | AT3G15500 | 60.479 | 167 | 60 | 2 | 4 | 170 | 7 | 167 | 5.69e-68 | 216 |
MS.gene007442.t1 | AT1G52890 | 59.172 | 169 | 63 | 2 | 2 | 170 | 5 | 167 | 1.25e-67 | 214 |
MS.gene007442.t1 | AT5G63790 | 60.123 | 163 | 61 | 2 | 7 | 168 | 46 | 205 | 3.50e-67 | 213 |
MS.gene007442.t1 | AT5G63790 | 60.123 | 163 | 61 | 2 | 7 | 168 | 56 | 215 | 5.39e-67 | 213 |
MS.gene007442.t1 | AT1G52880 | 61.963 | 163 | 56 | 2 | 15 | 171 | 21 | 183 | 8.47e-66 | 210 |
MS.gene007442.t1 | AT4G27410 | 55.026 | 189 | 61 | 5 | 2 | 172 | 5 | 187 | 3.25e-65 | 208 |
MS.gene007442.t1 | AT5G39610 | 58.861 | 158 | 59 | 3 | 9 | 165 | 18 | 170 | 8.56e-58 | 188 |
MS.gene007442.t1 | AT2G24430 | 56.329 | 158 | 64 | 2 | 8 | 165 | 13 | 165 | 1.47e-57 | 189 |
MS.gene007442.t1 | AT2G24430 | 56.329 | 158 | 64 | 2 | 8 | 165 | 13 | 165 | 1.47e-57 | 189 |
MS.gene007442.t1 | AT5G07680 | 56.364 | 165 | 68 | 3 | 3 | 167 | 9 | 169 | 2.14e-57 | 189 |
MS.gene007442.t1 | AT1G76420 | 50.857 | 175 | 81 | 2 | 7 | 181 | 18 | 187 | 3.34e-57 | 188 |
MS.gene007442.t1 | AT5G07680 | 57.862 | 159 | 63 | 3 | 9 | 167 | 1 | 155 | 3.71e-57 | 187 |
MS.gene007442.t1 | AT3G15170 | 58.125 | 160 | 65 | 2 | 8 | 167 | 17 | 174 | 5.65e-57 | 187 |
MS.gene007442.t1 | AT5G61430 | 57.595 | 158 | 63 | 3 | 8 | 165 | 13 | 166 | 8.21e-57 | 187 |
MS.gene007442.t1 | AT5G53950 | 56.604 | 159 | 59 | 2 | 11 | 165 | 17 | 169 | 9.31e-56 | 186 |
MS.gene007442.t1 | AT3G18400 | 55.063 | 158 | 64 | 2 | 8 | 165 | 2 | 152 | 1.19e-55 | 184 |
MS.gene007442.t1 | AT5G13180 | 56.494 | 154 | 59 | 2 | 9 | 162 | 12 | 157 | 2.24e-55 | 181 |
MS.gene007442.t1 | AT3G29035 | 58.710 | 155 | 60 | 3 | 8 | 162 | 21 | 171 | 5.50e-55 | 182 |
MS.gene007442.t1 | AT5G18270 | 57.325 | 157 | 64 | 3 | 9 | 165 | 19 | 172 | 1.05e-54 | 182 |
MS.gene007442.t1 | AT1G26870 | 48.333 | 180 | 72 | 2 | 2 | 168 | 7 | 178 | 1.22e-54 | 184 |
MS.gene007442.t1 | AT5G39820 | 45.813 | 203 | 82 | 6 | 13 | 187 | 22 | 224 | 3.82e-54 | 180 |
MS.gene007442.t1 | AT3G04060 | 50.820 | 183 | 85 | 5 | 9 | 190 | 18 | 196 | 4.96e-54 | 180 |
MS.gene007442.t1 | AT5G18270 | 56.051 | 157 | 66 | 3 | 9 | 165 | 19 | 172 | 1.03e-53 | 179 |
MS.gene007442.t1 | AT2G33480 | 55.769 | 156 | 56 | 5 | 9 | 162 | 13 | 157 | 1.13e-51 | 172 |
MS.gene007442.t1 | AT2G33480 | 55.128 | 156 | 55 | 4 | 9 | 162 | 13 | 155 | 1.60e-51 | 171 |
MS.gene007442.t1 | AT1G12260 | 50.943 | 159 | 67 | 3 | 10 | 165 | 6 | 156 | 6.04e-51 | 172 |
MS.gene007442.t1 | AT1G12260 | 50.943 | 159 | 67 | 3 | 10 | 165 | 6 | 156 | 1.31e-50 | 173 |
MS.gene007442.t1 | AT3G12977 | 48.101 | 158 | 77 | 2 | 8 | 165 | 15 | 167 | 1.94e-50 | 169 |
MS.gene007442.t1 | AT3G03200 | 50.625 | 160 | 72 | 3 | 9 | 166 | 4 | 158 | 2.38e-50 | 174 |
MS.gene007442.t1 | AT3G17730 | 48.447 | 161 | 75 | 4 | 9 | 167 | 4 | 158 | 5.28e-50 | 167 |
MS.gene007442.t1 | AT1G79580 | 50.000 | 162 | 70 | 3 | 7 | 165 | 13 | 166 | 1.95e-49 | 169 |
MS.gene007442.t1 | AT1G79580 | 50.000 | 162 | 70 | 3 | 7 | 165 | 13 | 166 | 1.95e-49 | 169 |
MS.gene007442.t1 | AT1G79580 | 50.000 | 162 | 70 | 3 | 7 | 165 | 13 | 166 | 1.95e-49 | 169 |
MS.gene007442.t1 | AT1G79580 | 50.000 | 162 | 70 | 3 | 7 | 165 | 13 | 166 | 1.95e-49 | 169 |
MS.gene007442.t1 | AT1G79580 | 50.000 | 162 | 70 | 3 | 7 | 165 | 13 | 166 | 1.95e-49 | 169 |
MS.gene007442.t1 | AT2G43000 | 45.349 | 172 | 88 | 3 | 1 | 171 | 7 | 173 | 3.03e-49 | 166 |
MS.gene007442.t1 | AT1G65910 | 49.057 | 159 | 73 | 3 | 9 | 165 | 4 | 156 | 3.26e-49 | 174 |
MS.gene007442.t1 | AT5G17260 | 50.625 | 160 | 72 | 4 | 9 | 166 | 4 | 158 | 4.03e-49 | 171 |
MS.gene007442.t1 | AT1G56010 | 49.686 | 159 | 76 | 3 | 8 | 165 | 16 | 171 | 4.51e-49 | 167 |
MS.gene007442.t1 | AT2G18060 | 38.589 | 241 | 125 | 8 | 5 | 238 | 3 | 227 | 6.58e-49 | 167 |
MS.gene007442.t1 | AT2G18060 | 38.589 | 241 | 125 | 8 | 5 | 238 | 3 | 227 | 6.58e-49 | 167 |
MS.gene007442.t1 | AT1G62700 | 47.059 | 187 | 75 | 6 | 10 | 181 | 6 | 183 | 9.62e-49 | 168 |
MS.gene007442.t1 | AT1G62700 | 47.059 | 187 | 75 | 6 | 10 | 181 | 6 | 183 | 9.62e-49 | 168 |
MS.gene007442.t1 | AT5G62380 | 35.870 | 276 | 138 | 9 | 10 | 258 | 6 | 269 | 1.83e-48 | 166 |
MS.gene007442.t1 | AT5G62380 | 35.870 | 276 | 138 | 9 | 10 | 258 | 6 | 269 | 1.83e-48 | 166 |
MS.gene007442.t1 | AT4G10350 | 46.809 | 188 | 89 | 4 | 11 | 195 | 9 | 188 | 2.24e-48 | 166 |
MS.gene007442.t1 | AT4G36160 | 44.279 | 201 | 95 | 7 | 11 | 206 | 14 | 202 | 4.96e-48 | 166 |
MS.gene007442.t1 | AT4G36160 | 44.279 | 201 | 95 | 7 | 11 | 206 | 10 | 198 | 5.42e-48 | 166 |
MS.gene007442.t1 | AT4G36160 | 44.279 | 201 | 95 | 7 | 11 | 206 | 10 | 198 | 5.42e-48 | 166 |
MS.gene007442.t1 | AT1G71930 | 48.101 | 158 | 71 | 3 | 11 | 165 | 9 | 158 | 5.55e-48 | 164 |
MS.gene007442.t1 | AT1G71930 | 48.101 | 158 | 71 | 3 | 11 | 165 | 9 | 158 | 5.55e-48 | 164 |
MS.gene007442.t1 | AT5G46590 | 52.532 | 158 | 67 | 4 | 11 | 165 | 6 | 158 | 6.54e-48 | 163 |
MS.gene007442.t1 | AT1G32770 | 47.879 | 165 | 75 | 4 | 10 | 165 | 15 | 177 | 1.02e-47 | 164 |
MS.gene007442.t1 | AT2G02450 | 50.323 | 155 | 70 | 2 | 13 | 167 | 53 | 200 | 4.26e-47 | 163 |
MS.gene007442.t1 | AT2G02450 | 50.323 | 155 | 70 | 2 | 13 | 167 | 53 | 200 | 4.93e-47 | 164 |
MS.gene007442.t1 | AT2G46770 | 47.619 | 168 | 74 | 5 | 10 | 165 | 15 | 180 | 1.61e-46 | 161 |
MS.gene007442.t1 | AT1G33280 | 49.367 | 158 | 68 | 3 | 11 | 165 | 8 | 156 | 1.75e-46 | 159 |
MS.gene007442.t1 | AT5G66300 | 42.564 | 195 | 97 | 5 | 11 | 198 | 12 | 198 | 4.84e-46 | 158 |
MS.gene007442.t1 | AT3G61910 | 42.938 | 177 | 87 | 3 | 1 | 165 | 1 | 175 | 7.40e-46 | 159 |
MS.gene007442.t1 | AT5G46590 | 53.571 | 140 | 62 | 2 | 11 | 148 | 6 | 144 | 1.40e-45 | 156 |
MS.gene007442.t1 | AT4G17980 | 48.408 | 157 | 77 | 2 | 11 | 165 | 6 | 160 | 3.85e-45 | 155 |
MS.gene007442.t1 | AT4G17980 | 48.408 | 157 | 77 | 2 | 11 | 165 | 6 | 160 | 4.40e-45 | 155 |
MS.gene007442.t1 | AT1G33060 | 42.784 | 194 | 101 | 4 | 11 | 200 | 24 | 211 | 7.54e-45 | 162 |
MS.gene007442.t1 | AT1G33060 | 42.784 | 194 | 101 | 4 | 11 | 200 | 24 | 211 | 8.08e-45 | 162 |
MS.gene007442.t1 | AT3G10500 | 46.341 | 164 | 80 | 3 | 7 | 168 | 5 | 162 | 8.94e-45 | 160 |
MS.gene007442.t1 | AT3G10480 | 47.305 | 167 | 79 | 4 | 7 | 169 | 23 | 184 | 9.58e-44 | 156 |
MS.gene007442.t1 | AT3G10480 | 47.904 | 167 | 77 | 5 | 7 | 169 | 23 | 183 | 3.04e-43 | 154 |
MS.gene007442.t1 | AT4G28530 | 45.930 | 172 | 69 | 3 | 10 | 165 | 9 | 172 | 3.20e-43 | 152 |
MS.gene007442.t1 | AT2G17040 | 38.197 | 233 | 123 | 8 | 8 | 234 | 4 | 221 | 4.84e-43 | 150 |
MS.gene007442.t1 | AT3G10490 | 46.012 | 163 | 79 | 4 | 11 | 169 | 27 | 184 | 7.05e-43 | 148 |
MS.gene007442.t1 | AT5G04410 | 34.317 | 271 | 157 | 6 | 7 | 263 | 5 | 268 | 1.55e-42 | 155 |
MS.gene007442.t1 | AT1G54330 | 47.500 | 160 | 71 | 4 | 9 | 165 | 4 | 153 | 1.65e-42 | 149 |
MS.gene007442.t1 | AT5G09330 | 41.176 | 170 | 91 | 4 | 8 | 174 | 3 | 166 | 6.17e-42 | 152 |
MS.gene007442.t1 | AT5G09330 | 41.176 | 170 | 91 | 4 | 8 | 174 | 3 | 166 | 6.17e-42 | 152 |
MS.gene007442.t1 | AT5G09330 | 41.176 | 170 | 91 | 4 | 8 | 174 | 3 | 166 | 6.17e-42 | 152 |
MS.gene007442.t1 | AT5G09330 | 41.176 | 170 | 91 | 4 | 8 | 174 | 3 | 166 | 6.17e-42 | 152 |
MS.gene007442.t1 | AT5G09330 | 41.176 | 170 | 91 | 4 | 8 | 174 | 3 | 166 | 6.17e-42 | 152 |
MS.gene007442.t1 | AT1G32510 | 46.012 | 163 | 76 | 4 | 11 | 165 | 6 | 164 | 8.39e-42 | 147 |
MS.gene007442.t1 | AT4G35580 | 45.161 | 186 | 83 | 5 | 11 | 185 | 9 | 186 | 1.52e-41 | 152 |
MS.gene007442.t1 | AT4G35580 | 45.161 | 186 | 83 | 5 | 11 | 185 | 9 | 186 | 1.55e-41 | 151 |
MS.gene007442.t1 | AT4G35580 | 45.161 | 186 | 83 | 5 | 11 | 185 | 9 | 186 | 1.67e-41 | 151 |
MS.gene007442.t1 | AT3G10490 | 46.012 | 163 | 79 | 4 | 11 | 169 | 27 | 184 | 2.23e-41 | 150 |
MS.gene007442.t1 | AT1G34180 | 36.946 | 203 | 112 | 5 | 13 | 212 | 18 | 207 | 2.64e-41 | 149 |
MS.gene007442.t1 | AT3G12910 | 42.458 | 179 | 91 | 5 | 13 | 180 | 23 | 200 | 3.80e-41 | 145 |
MS.gene007442.t1 | AT1G34180 | 45.324 | 139 | 72 | 2 | 13 | 149 | 18 | 154 | 1.85e-40 | 149 |
MS.gene007442.t1 | AT2G27300 | 43.871 | 155 | 73 | 3 | 11 | 164 | 14 | 155 | 2.49e-40 | 144 |
MS.gene007442.t1 | AT5G24590 | 47.771 | 157 | 75 | 4 | 11 | 165 | 13 | 164 | 6.39e-40 | 145 |
MS.gene007442.t1 | AT5G64060 | 41.718 | 163 | 86 | 4 | 11 | 170 | 6 | 162 | 7.83e-40 | 144 |
MS.gene007442.t1 | AT1G34190 | 47.692 | 130 | 64 | 2 | 13 | 140 | 18 | 145 | 9.74e-40 | 147 |
MS.gene007442.t1 | AT3G49530 | 44.379 | 169 | 85 | 4 | 1 | 165 | 1 | 164 | 1.05e-39 | 144 |
MS.gene007442.t1 | AT3G10480 | 40.500 | 200 | 77 | 5 | 7 | 169 | 23 | 217 | 1.08e-39 | 146 |
MS.gene007442.t1 | AT3G49530 | 44.379 | 169 | 85 | 4 | 1 | 165 | 1 | 164 | 1.67e-39 | 145 |
MS.gene007442.t1 | AT1G34180 | 35.349 | 215 | 111 | 5 | 13 | 212 | 18 | 219 | 8.30e-39 | 143 |
MS.gene007442.t1 | AT1G34180 | 42.384 | 151 | 71 | 2 | 13 | 149 | 18 | 166 | 5.32e-38 | 142 |
MS.gene007442.t1 | AT3G44290 | 43.137 | 153 | 73 | 4 | 13 | 164 | 16 | 155 | 1.25e-37 | 134 |
MS.gene007442.t1 | AT1G32870 | 46.250 | 160 | 78 | 4 | 11 | 168 | 10 | 163 | 1.54e-37 | 140 |
MS.gene007442.t1 | AT1G32870 | 46.250 | 160 | 78 | 4 | 11 | 168 | 10 | 163 | 2.11e-37 | 140 |
MS.gene007442.t1 | AT1G32870 | 46.250 | 160 | 78 | 4 | 11 | 168 | 46 | 199 | 3.02e-37 | 140 |
MS.gene007442.t1 | AT3G44290 | 43.137 | 153 | 73 | 4 | 13 | 164 | 16 | 155 | 4.01e-37 | 136 |
MS.gene007442.t1 | AT5G22290 | 38.587 | 184 | 90 | 4 | 13 | 185 | 23 | 194 | 3.29e-36 | 134 |
MS.gene007442.t1 | AT5G04395 | 42.282 | 149 | 72 | 2 | 4 | 138 | 21 | 169 | 6.40e-34 | 123 |
MS.gene007442.t1 | AT5G61430 | 58.491 | 106 | 40 | 3 | 60 | 165 | 2 | 103 | 1.02e-33 | 125 |
MS.gene007442.t1 | AT5G64530 | 39.560 | 182 | 87 | 4 | 9 | 180 | 1 | 169 | 1.59e-33 | 122 |
MS.gene007442.t1 | AT3G12977 | 51.887 | 106 | 46 | 2 | 60 | 165 | 14 | 114 | 6.74e-33 | 122 |
MS.gene007442.t1 | AT1G56010 | 53.774 | 106 | 46 | 2 | 60 | 165 | 2 | 104 | 8.61e-32 | 120 |
MS.gene007442.t1 | AT5G64530 | 43.939 | 132 | 62 | 2 | 9 | 140 | 1 | 120 | 1.08e-31 | 116 |
MS.gene007442.t1 | AT4G10350 | 49.242 | 132 | 59 | 3 | 64 | 195 | 18 | 141 | 1.34e-30 | 117 |
MS.gene007442.t1 | AT5G22380 | 39.634 | 164 | 90 | 4 | 14 | 171 | 8 | 168 | 1.49e-30 | 116 |
MS.gene007442.t1 | AT3G44350 | 38.235 | 170 | 90 | 6 | 10 | 171 | 4 | 166 | 2.34e-28 | 110 |
MS.gene007442.t1 | AT4G01520 | 35.417 | 192 | 107 | 7 | 12 | 198 | 5 | 184 | 5.89e-28 | 110 |
MS.gene007442.t1 | AT4G01550 | 44.961 | 129 | 67 | 3 | 14 | 138 | 7 | 135 | 7.89e-28 | 113 |
MS.gene007442.t1 | AT2G33480 | 54.455 | 101 | 36 | 4 | 64 | 162 | 8 | 100 | 2.10e-27 | 107 |
MS.gene007442.t1 | AT4G28530 | 44.961 | 129 | 55 | 2 | 10 | 122 | 9 | 137 | 2.42e-27 | 109 |
MS.gene007442.t1 | AT3G04420 | 41.085 | 129 | 70 | 3 | 12 | 136 | 4 | 130 | 1.16e-26 | 107 |
MS.gene007442.t1 | AT3G44350 | 40.288 | 139 | 73 | 4 | 10 | 141 | 4 | 139 | 1.48e-26 | 103 |
MS.gene007442.t1 | AT3G04420 | 41.085 | 129 | 70 | 3 | 12 | 136 | 4 | 130 | 2.20e-26 | 107 |
MS.gene007442.t1 | AT4G01540 | 35.263 | 190 | 106 | 7 | 14 | 198 | 7 | 184 | 5.45e-26 | 107 |
MS.gene007442.t1 | AT4G01540 | 35.263 | 190 | 106 | 7 | 14 | 198 | 7 | 184 | 5.84e-26 | 107 |
MS.gene007442.t1 | AT4G01540 | 35.263 | 190 | 106 | 7 | 14 | 198 | 7 | 184 | 6.93e-26 | 106 |
MS.gene007442.t1 | AT4G01540 | 35.263 | 190 | 106 | 7 | 14 | 198 | 7 | 184 | 7.33e-26 | 107 |
MS.gene007442.t1 | AT5G14000 | 34.031 | 191 | 113 | 6 | 9 | 197 | 13 | 192 | 9.33e-25 | 99.8 |
MS.gene007442.t1 | AT1G02230 | 40.769 | 130 | 69 | 5 | 12 | 136 | 4 | 130 | 1.67e-24 | 102 |
MS.gene007442.t1 | AT2G43000 | 43.878 | 98 | 50 | 2 | 73 | 170 | 2 | 94 | 6.98e-22 | 92.0 |
MS.gene007442.t1 | AT1G02220 | 37.879 | 132 | 73 | 4 | 9 | 136 | 1 | 127 | 7.01e-22 | 95.5 |
MS.gene007442.t1 | AT5G14000 | 37.879 | 132 | 76 | 4 | 9 | 138 | 13 | 140 | 1.10e-21 | 90.1 |
MS.gene007442.t1 | AT1G02250 | 33.962 | 159 | 89 | 5 | 12 | 165 | 4 | 151 | 3.15e-21 | 93.2 |
MS.gene007442.t1 | AT1G01010 | 34.969 | 163 | 83 | 7 | 14 | 165 | 6 | 156 | 4.05e-21 | 93.6 |
MS.gene007442.t1 | AT2G18060 | 33.766 | 154 | 82 | 7 | 89 | 238 | 2 | 139 | 2.03e-16 | 78.6 |
MS.gene007442.t1 | AT3G56530 | 30.435 | 161 | 95 | 6 | 8 | 162 | 49 | 198 | 2.51e-16 | 79.0 |
MS.gene007442.t1 | AT3G10490 | 46.591 | 88 | 40 | 3 | 84 | 169 | 2 | 84 | 5.17e-16 | 78.2 |
MS.gene007442.t1 | AT3G10490 | 46.591 | 88 | 40 | 3 | 84 | 169 | 2 | 84 | 5.17e-16 | 78.2 |
MS.gene007442.t1 | AT3G55210 | 31.737 | 167 | 88 | 6 | 11 | 162 | 11 | 166 | 9.26e-16 | 76.6 |
MS.gene007442.t1 | AT5G50820 | 32.877 | 146 | 82 | 6 | 9 | 149 | 15 | 149 | 3.61e-15 | 73.2 |
MS.gene007442.t1 | AT3G04430 | 36.090 | 133 | 71 | 5 | 17 | 137 | 6 | 136 | 2.45e-13 | 68.2 |
MS.gene007442.t1 | AT1G28470 | 35.135 | 148 | 75 | 8 | 11 | 141 | 77 | 220 | 2.72e-13 | 70.1 |
MS.gene007442.t1 | AT5G22290 | 38.318 | 107 | 44 | 3 | 89 | 185 | 1 | 95 | 7.66e-13 | 67.8 |
MS.gene007442.t1 | AT4G29230 | 30.247 | 162 | 86 | 6 | 1 | 138 | 38 | 196 | 1.75e-11 | 65.5 |
MS.gene007442.t1 | AT4G29230 | 30.247 | 162 | 86 | 6 | 1 | 138 | 38 | 196 | 3.35e-11 | 64.3 |
Find 63 sgRNAs with CRISPR-Local
Find 92 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCCAATGTTACCTTATATTT+TGG | 0.117587 | 7.3:+12004919 | MS.gene007442:CDS |
AATCTTCCCAACTGCTTCTT+GGG | 0.270345 | 7.3:-12004802 | None:intergenic |
GAATCTTCCCAACTGCTTCT+TGG | 0.275408 | 7.3:-12004803 | None:intergenic |
GAAAGCTCTTGTGTTCTATA+AGG | 0.276233 | 7.3:+12004351 | MS.gene007442:CDS |
GAGCAGCTGGTGTAGGTTAT+TGG | 0.281575 | 7.3:+12004266 | MS.gene007442:CDS |
TCTATTAGGCCTCAATCCTT+TGG | 0.292374 | 7.3:-12004245 | None:intergenic |
TTGGGATACTTTCTGTCCCT+TGG | 0.321556 | 7.3:-12004226 | None:intergenic |
CTCTTAGAAGCCAAAATATA+AGG | 0.363775 | 7.3:-12004929 | None:intergenic |
GATGACAACTTAAACGTGAT+TGG | 0.377864 | 7.3:+12005013 | MS.gene007442:CDS |
TTAACAGGCAAGGCTTTGTT+TGG | 0.387591 | 7.3:+12004178 | MS.gene007442:intron |
CTTAATAACTTAACCTTCAC+TGG | 0.394784 | 7.3:+12005253 | MS.gene007442:CDS |
CTATTAGGCCTCAATCCTTT+GGG | 0.399520 | 7.3:-12004244 | None:intergenic |
CCTACACCAGCTGCTCTATT+AGG | 0.409247 | 7.3:-12004259 | None:intergenic |
AGTTTAAACAGAGAAGTTGA+TGG | 0.418602 | 7.3:+12005142 | MS.gene007442:CDS |
TCTCATAGAGCCACTATGAT+TGG | 0.425837 | 7.3:-12004449 | None:intergenic |
TCAGAAATTCAACTTCCTCC+TGG | 0.429845 | 7.3:+12003928 | MS.gene007442:CDS |
CTTTGTTTGGCGAGGAAGAA+TGG | 0.442307 | 7.3:+12004191 | MS.gene007442:CDS |
GGAAGTTGAATTTCTGAATG+AGG | 0.450490 | 7.3:-12003922 | None:intergenic |
GTAGGTTATTGGAAAGCAAC+TGG | 0.460130 | 7.3:+12004277 | MS.gene007442:CDS |
AAAGCTCTTGTGTTCTATAA+GGG | 0.461663 | 7.3:+12004352 | MS.gene007442:CDS |
AACCCACATGAAGTAAGAAT+AGG | 0.478829 | 7.3:-12004310 | None:intergenic |
TTTGCTTCAGCTGGATGAGT+GGG | 0.481009 | 7.3:+12004748 | MS.gene007442:intron |
AAACCTATTCTTACTTCATG+TGG | 0.485318 | 7.3:+12004307 | MS.gene007442:CDS |
GAGGTCATACCAATGGAATT+AGG | 0.485329 | 7.3:-12004959 | None:intergenic |
TCATGTGGGTTGAAAAGCAT+TGG | 0.491457 | 7.3:+12004322 | MS.gene007442:CDS |
ATTTCTGCTATGAATGAAGC+AGG | 0.501170 | 7.3:-12004024 | None:intergenic |
TTGAGGCCTAATAGAGCAGC+TGG | 0.514886 | 7.3:+12004253 | MS.gene007442:CDS |
GCCAAAATATAAGGTAACAT+TGG | 0.517221 | 7.3:-12004920 | None:intergenic |
GTTAAGTTATTAAGCTCTTG+AGG | 0.518782 | 7.3:-12005244 | None:intergenic |
AACCTATTCTTACTTCATGT+GGG | 0.525385 | 7.3:+12004308 | MS.gene007442:CDS |
TAAACAGAGAAGTTGATGGT+AGG | 0.527609 | 7.3:+12005146 | MS.gene007442:CDS |
GGGCAGCCCAAGAAGCAGTT+GGG | 0.538362 | 7.3:+12004796 | MS.gene007442:CDS |
ATTTCTACAGCTTTGATCAG+TGG | 0.541984 | 7.3:+12005206 | MS.gene007442:CDS |
ATGGTATTTCTTTACTCCAA+GGG | 0.547047 | 7.3:+12004210 | MS.gene007442:CDS |
GCTATGAATGAAGCAGGAAG+AGG | 0.549644 | 7.3:-12004018 | None:intergenic |
ATCTCAAATTCCAATCATAG+TGG | 0.551979 | 7.3:+12004439 | MS.gene007442:CDS |
AGTGCTCTGCCTAATTCCAT+TGG | 0.553997 | 7.3:+12004950 | MS.gene007442:CDS |
TGGGCAGCCCAAGAAGCAGT+TGG | 0.555345 | 7.3:+12004795 | MS.gene007442:CDS |
TTCTTATCAGCTACAACTGA+GGG | 0.556835 | 7.3:+12005043 | MS.gene007442:CDS |
GACGGGTGGAATCTAAATCC+AGG | 0.557638 | 7.3:-12003946 | None:intergenic |
GGTTCAGGATTAGAGTTCAC+AGG | 0.560631 | 7.3:-12004869 | None:intergenic |
TATAAGGGACGTCCACCAAA+GGG | 0.568110 | 7.3:+12004367 | MS.gene007442:CDS |
AGTGGATCATGCATGAGTAT+AGG | 0.571374 | 7.3:+12004401 | MS.gene007442:CDS |
CCTAATAGAGCAGCTGGTGT+AGG | 0.572729 | 7.3:+12004259 | MS.gene007442:CDS |
GACAGACTTGGAAGCTCCCA+CGG | 0.573638 | 7.3:-12004066 | None:intergenic |
AATGGTATTTCTTTACTCCA+AGG | 0.574944 | 7.3:+12004209 | MS.gene007442:CDS |
GAAAGTATCCCAAAGGATTG+AGG | 0.576087 | 7.3:+12004236 | MS.gene007442:CDS |
TTGTATATTTACATTGTCTG+AGG | 0.581816 | 7.3:-12004978 | None:intergenic |
TACTTATGTATATCCAGTGA+AGG | 0.582452 | 7.3:-12005266 | None:intergenic |
ATCTTTACAAGTACAATCCG+TGG | 0.586507 | 7.3:+12004049 | MS.gene007442:CDS |
GAGGACATCATAAAAGTCCA+TGG | 0.590571 | 7.3:-12005113 | None:intergenic |
CAATGAGTTCTTCATCAGAC+GGG | 0.595160 | 7.3:-12003963 | None:intergenic |
ATTGTCTGAGGTCATACCAA+TGG | 0.597069 | 7.3:-12004966 | None:intergenic |
GTTCTTATCAGCTACAACTG+AGG | 0.598360 | 7.3:+12005042 | MS.gene007442:CDS |
CTATAAGGGACGTCCACCAA+AGG | 0.603342 | 7.3:+12004366 | MS.gene007442:CDS |
ACAATGAGTTCTTCATCAGA+CGG | 0.625487 | 7.3:-12003964 | None:intergenic |
TCTTTACAAGTACAATCCGT+GGG | 0.631781 | 7.3:+12004050 | MS.gene007442:CDS |
AGGCAAGGCTTTGTTTGGCG+AGG | 0.637204 | 7.3:+12004183 | MS.gene007442:intron |
TGAGTTCTTCATCAGACGGG+TGG | 0.640154 | 7.3:-12003960 | None:intergenic |
TGTCGAAGATAATGTTGCCA+TGG | 0.658610 | 7.3:+12005096 | MS.gene007442:CDS |
CAAAGGGATCTAAAACTGAG+TGG | 0.678896 | 7.3:+12004383 | MS.gene007442:CDS |
AGGGACAGAAAGTATCCCAA+AGG | 0.681244 | 7.3:+12004229 | MS.gene007442:CDS |
GGGTGGAATCTAAATCCAGG+AGG | 0.760114 | 7.3:-12003943 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTCATTTTTATTATTTTGA+AGG | + | chr7.3:12004123-12004142 | MS.gene007442:intron | 10.0% |
!!! | ATATTTTGTTGTTTTTAAAC+TGG | + | chr7.3:12004674-12004693 | MS.gene007442:intron | 15.0% |
!!! | TAGTTACATTTAATTTCTTT+TGG | - | chr7.3:12004573-12004592 | None:intergenic | 15.0% |
!! | TTGAAAAAGATTTAAGCAAA+GGG | + | chr7.3:12005179-12005198 | MS.gene007442:CDS | 20.0% |
!!! | ATTCATTTTGTACATAGTTT+TGG | - | chr7.3:12004898-12004917 | None:intergenic | 20.0% |
! | AAGATGAAAAATTGAACTCA+TGG | - | chr7.3:12004486-12004505 | None:intergenic | 25.0% |
! | CTTGAAAAAGATTTAAGCAA+AGG | + | chr7.3:12005178-12005197 | MS.gene007442:CDS | 25.0% |
! | GTACTAAATCTTCAGTTTAA+AGG | - | chr7.3:12004641-12004660 | None:intergenic | 25.0% |
! | TTGTATATTTACATTGTCTG+AGG | - | chr7.3:12004981-12005000 | None:intergenic | 25.0% |
! | TTTGAAGGAATGTTCATTAA+AGG | + | chr7.3:12004138-12004157 | MS.gene007442:intron | 25.0% |
!! | CTCTGTTTAAACTTTTATTG+AGG | - | chr7.3:12005135-12005154 | None:intergenic | 25.0% |
!! | GGTATGTTAATATGAAGTTT+TGG | + | chr7.3:12004695-12004714 | MS.gene007442:intron | 25.0% |
!! | TCCAATGTTACCTTATATTT+TGG | + | chr7.3:12004919-12004938 | MS.gene007442:CDS | 25.0% |
AAACCTATTCTTACTTCATG+TGG | + | chr7.3:12004307-12004326 | MS.gene007442:CDS | 30.0% | |
AAAGCTCTTGTGTTCTATAA+GGG | + | chr7.3:12004352-12004371 | MS.gene007442:CDS | 30.0% | |
AACCTATTCTTACTTCATGT+GGG | + | chr7.3:12004308-12004327 | MS.gene007442:CDS | 30.0% | |
AATGGTATTTCTTTACTCCA+AGG | + | chr7.3:12004209-12004228 | MS.gene007442:CDS | 30.0% | |
AGGAATGTTCATTAAAGGAA+TGG | + | chr7.3:12004143-12004162 | MS.gene007442:intron | 30.0% | |
AGTTTAAACAGAGAAGTTGA+TGG | + | chr7.3:12005142-12005161 | MS.gene007442:CDS | 30.0% | |
ATCTCAAATTCCAATCATAG+TGG | + | chr7.3:12004439-12004458 | MS.gene007442:CDS | 30.0% | |
ATGGTATTTCTTTACTCCAA+GGG | + | chr7.3:12004210-12004229 | MS.gene007442:CDS | 30.0% | |
CTCTTAGAAGCCAAAATATA+AGG | - | chr7.3:12004932-12004951 | None:intergenic | 30.0% | |
CTTAATAACTTAACCTTCAC+TGG | + | chr7.3:12005253-12005272 | MS.gene007442:CDS | 30.0% | |
GCCAAAATATAAGGTAACAT+TGG | - | chr7.3:12004923-12004942 | None:intergenic | 30.0% | |
GTTAAGTTATTAAGCTCTTG+AGG | - | chr7.3:12005247-12005266 | None:intergenic | 30.0% | |
!! | TGGAAGCTTTTCATTTTAAC+AGG | + | chr7.3:12004163-12004182 | MS.gene007442:intron | 30.0% |
!!! | TTTTGTACATAGTTTTGGAC+TGG | - | chr7.3:12004893-12004912 | None:intergenic | 30.0% |
AACCCACATGAAGTAAGAAT+AGG | - | chr7.3:12004313-12004332 | None:intergenic | 35.0% | |
ACAATGAGTTCTTCATCAGA+CGG | - | chr7.3:12003967-12003986 | None:intergenic | 35.0% | |
ATCTTTACAAGTACAATCCG+TGG | + | chr7.3:12004049-12004068 | MS.gene007442:CDS | 35.0% | |
ATTTCTGCTATGAATGAAGC+AGG | - | chr7.3:12004027-12004046 | None:intergenic | 35.0% | |
GAAAGCTCTTGTGTTCTATA+AGG | + | chr7.3:12004351-12004370 | MS.gene007442:CDS | 35.0% | |
GAAGTTGTTAAAGACAGACT+TGG | - | chr7.3:12004081-12004100 | None:intergenic | 35.0% | |
GATGACAACTTAAACGTGAT+TGG | + | chr7.3:12005013-12005032 | MS.gene007442:CDS | 35.0% | |
GGAAGTTGAATTTCTGAATG+AGG | - | chr7.3:12003925-12003944 | None:intergenic | 35.0% | |
TCTTTACAAGTACAATCCGT+GGG | + | chr7.3:12004050-12004069 | MS.gene007442:CDS | 35.0% | |
TTCTTATCAGCTACAACTGA+GGG | + | chr7.3:12005043-12005062 | MS.gene007442:CDS | 35.0% | |
! | ATTTCTACAGCTTTGATCAG+TGG | + | chr7.3:12005206-12005225 | MS.gene007442:CDS | 35.0% |
!! | GCTTTTCATTTTAACAGGCA+AGG | + | chr7.3:12004168-12004187 | MS.gene007442:intron | 35.0% |
!! | TAAACAGAGAAGTTGATGGT+AGG | + | chr7.3:12005146-12005165 | MS.gene007442:CDS | 35.0% |
AATCTTCCCAACTGCTTCTT+GGG | - | chr7.3:12004805-12004824 | None:intergenic | 40.0% | |
AGTGGATCATGCATGAGTAT+AGG | + | chr7.3:12004401-12004420 | MS.gene007442:CDS | 40.0% | |
ATGCCGTGTTCGACAAAAAA+TGG | + | chr7.3:12004775-12004794 | MS.gene007442:CDS | 40.0% | |
CAATGAGTTCTTCATCAGAC+GGG | - | chr7.3:12003966-12003985 | None:intergenic | 40.0% | |
CTATTAGGCCTCAATCCTTT+GGG | - | chr7.3:12004247-12004266 | None:intergenic | 40.0% | |
GAGGACATCATAAAAGTCCA+TGG | - | chr7.3:12005116-12005135 | None:intergenic | 40.0% | |
GAGGTCATACCAATGGAATT+AGG | - | chr7.3:12004962-12004981 | None:intergenic | 40.0% | |
GTAGGTTATTGGAAAGCAAC+TGG | + | chr7.3:12004277-12004296 | MS.gene007442:CDS | 40.0% | |
GTTCTTATCAGCTACAACTG+AGG | + | chr7.3:12005042-12005061 | MS.gene007442:CDS | 40.0% | |
TCAGAAATTCAACTTCCTCC+TGG | + | chr7.3:12003928-12003947 | MS.gene007442:CDS | 40.0% | |
TCTATTAGGCCTCAATCCTT+TGG | - | chr7.3:12004248-12004267 | None:intergenic | 40.0% | |
TCTCATAGAGCCACTATGAT+TGG | - | chr7.3:12004452-12004471 | None:intergenic | 40.0% | |
TGCCGTGTTCGACAAAAAAT+GGG | + | chr7.3:12004776-12004795 | MS.gene007442:CDS | 40.0% | |
TGTCGAAGATAATGTTGCCA+TGG | + | chr7.3:12005096-12005115 | MS.gene007442:CDS | 40.0% | |
TGTCTGTGTTAGTGCTTCAT+AGG | - | chr7.3:12004515-12004534 | None:intergenic | 40.0% | |
! | ATTGTCTGAGGTCATACCAA+TGG | - | chr7.3:12004969-12004988 | None:intergenic | 40.0% |
! | CAAAGGGATCTAAAACTGAG+TGG | + | chr7.3:12004383-12004402 | MS.gene007442:CDS | 40.0% |
! | CTTCAGTTTAAAGGTGTGTC+CGG | - | chr7.3:12004632-12004651 | None:intergenic | 40.0% |
! | TCATGTGGGTTGAAAAGCAT+TGG | + | chr7.3:12004322-12004341 | MS.gene007442:CDS | 40.0% |
! | TTTCCTTCTTTTGCTTCAGC+TGG | + | chr7.3:12004739-12004758 | MS.gene007442:intron | 40.0% |
!! | GAAAGTATCCCAAAGGATTG+AGG | + | chr7.3:12004236-12004255 | MS.gene007442:CDS | 40.0% |
!! | TTAACAGGCAAGGCTTTGTT+TGG | + | chr7.3:12004178-12004197 | MS.gene007442:intron | 40.0% |
!!! | ACATAGTTTTGGACTGGTTC+AGG | - | chr7.3:12004887-12004906 | None:intergenic | 40.0% |
!!! | CACTCAGTTTTAGATCCCTT+TGG | - | chr7.3:12004385-12004404 | None:intergenic | 40.0% |
!!! | TCAGTTTTAGATCCCTTTGG+TGG | - | chr7.3:12004382-12004401 | None:intergenic | 40.0% |
!!! | TGCCCATTTTTTGTCGAACA+CGG | - | chr7.3:12004781-12004800 | None:intergenic | 40.0% |
AGTGCTCTGCCTAATTCCAT+TGG | + | chr7.3:12004950-12004969 | MS.gene007442:CDS | 45.0% | |
CATCCAGCTGAAGCAAAAGA+AGG | - | chr7.3:12004745-12004764 | None:intergenic | 45.0% | |
GAATCTTCCCAACTGCTTCT+TGG | - | chr7.3:12004806-12004825 | None:intergenic | 45.0% | |
GCTATGAATGAAGCAGGAAG+AGG | - | chr7.3:12004021-12004040 | None:intergenic | 45.0% | |
GGTTCAGGATTAGAGTTCAC+AGG | - | chr7.3:12004872-12004891 | None:intergenic | 45.0% | |
TATAAGGGACGTCCACCAAA+GGG | + | chr7.3:12004367-12004386 | MS.gene007442:CDS | 45.0% | |
TTGGGATACTTTCTGTCCCT+TGG | - | chr7.3:12004229-12004248 | None:intergenic | 45.0% | |
TTTGCTTCAGCTGGATGAGT+GGG | + | chr7.3:12004748-12004767 | MS.gene007442:intron | 45.0% | |
! | CATAGTGGCTCTATGAGAGT+AGG | + | chr7.3:12004454-12004473 | MS.gene007442:intron | 45.0% |
! | CTTTGTTTGGCGAGGAAGAA+TGG | + | chr7.3:12004191-12004210 | MS.gene007442:CDS | 45.0% |
! | TCGACAGCTTTTCTCTTCAG+TGG | - | chr7.3:12005082-12005101 | None:intergenic | 45.0% |
! | TTTTGCTTCAGCTGGATGAG+TGG | + | chr7.3:12004747-12004766 | MS.gene007442:intron | 45.0% |
!! | AGGGACAGAAAGTATCCCAA+AGG | + | chr7.3:12004229-12004248 | MS.gene007442:CDS | 45.0% |
CACTGACACACGTTGAACAC+CGG | + | chr7.3:12004610-12004629 | MS.gene007442:intron | 50.0% | |
CCTAATAGAGCAGCTGGTGT+AGG | + | chr7.3:12004259-12004278 | MS.gene007442:CDS | 50.0% | |
CCTACACCAGCTGCTCTATT+AGG | - | chr7.3:12004262-12004281 | None:intergenic | 50.0% | |
CTATAAGGGACGTCCACCAA+AGG | + | chr7.3:12004366-12004385 | MS.gene007442:CDS | 50.0% | |
GACGGGTGGAATCTAAATCC+AGG | - | chr7.3:12003949-12003968 | None:intergenic | 50.0% | |
GAGCAGCTGGTGTAGGTTAT+TGG | + | chr7.3:12004266-12004285 | MS.gene007442:CDS | 50.0% | |
GGGTGGAATCTAAATCCAGG+AGG | - | chr7.3:12003946-12003965 | None:intergenic | 50.0% | |
TGAGTTCTTCATCAGACGGG+TGG | - | chr7.3:12003963-12003982 | None:intergenic | 50.0% | |
TTGAGGCCTAATAGAGCAGC+TGG | + | chr7.3:12004253-12004272 | MS.gene007442:CDS | 50.0% | |
GACAGACTTGGAAGCTCCCA+CGG | - | chr7.3:12004069-12004088 | None:intergenic | 55.0% | |
!! | AGGCAAGGCTTTGTTTGGCG+AGG | + | chr7.3:12004183-12004202 | MS.gene007442:intron | 55.0% |
GGGCAGCCCAAGAAGCAGTT+GGG | + | chr7.3:12004796-12004815 | MS.gene007442:CDS | 60.0% | |
TGGGCAGCCCAAGAAGCAGT+TGG | + | chr7.3:12004795-12004814 | MS.gene007442:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.3 | gene | 12003910 | 12005285 | 12003910 | ID=MS.gene007442 |
chr7.3 | mRNA | 12003910 | 12005285 | 12003910 | ID=MS.gene007442.t1;Parent=MS.gene007442 |
chr7.3 | exon | 12003910 | 12004081 | 12003910 | ID=MS.gene007442.t1.exon1;Parent=MS.gene007442.t1 |
chr7.3 | CDS | 12003910 | 12004081 | 12003910 | ID=cds.MS.gene007442.t1;Parent=MS.gene007442.t1 |
chr7.3 | exon | 12004185 | 12004471 | 12004185 | ID=MS.gene007442.t1.exon2;Parent=MS.gene007442.t1 |
chr7.3 | CDS | 12004185 | 12004471 | 12004185 | ID=cds.MS.gene007442.t1;Parent=MS.gene007442.t1 |
chr7.3 | exon | 12004758 | 12005285 | 12004758 | ID=MS.gene007442.t1.exon3;Parent=MS.gene007442.t1 |
chr7.3 | CDS | 12004758 | 12005285 | 12004758 | ID=cds.MS.gene007442.t1;Parent=MS.gene007442.t1 |
Gene Sequence |
Protein sequence |