Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene00770.t1 | XP_013462889.1 | 86.2 | 836 | 76 | 5 | 1 | 808 | 1 | 825 | 0.00E+00 | 1454.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene00770.t1 | Q9SSE9 | 42.3 | 752 | 329 | 14 | 137 | 799 | 155 | 890 | 1.4e-158 | 561.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene00770.t1 | A0A072V4L2 | 86.2 | 836 | 76 | 5 | 1 | 808 | 1 | 825 | 0.0e+00 | 1454.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene00770.t1 | TR | Jumonji |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene00770.t1 | MTR_2g024270 | 86.124 | 836 | 77 | 5 | 1 | 808 | 1 | 825 | 0.0 | 1413 |
MS.gene00770.t1 | MTR_2g024140 | 84.143 | 700 | 99 | 1 | 105 | 804 | 2 | 689 | 0.0 | 1195 |
MS.gene00770.t1 | MTR_4g132540 | 61.694 | 744 | 225 | 10 | 110 | 806 | 140 | 870 | 0.0 | 907 |
MS.gene00770.t1 | MTR_1g114150 | 49.231 | 715 | 303 | 13 | 137 | 800 | 343 | 1048 | 0.0 | 645 |
MS.gene00770.t1 | MTR_5g065200 | 49.211 | 697 | 317 | 11 | 137 | 800 | 140 | 832 | 0.0 | 619 |
MS.gene00770.t1 | MTR_1g069565 | 47.563 | 759 | 310 | 14 | 122 | 800 | 129 | 879 | 0.0 | 616 |
MS.gene00770.t1 | MTR_1g114130 | 47.141 | 717 | 319 | 11 | 137 | 800 | 327 | 1036 | 0.0 | 606 |
MS.gene00770.t1 | MTR_1g114070 | 45.839 | 709 | 328 | 14 | 137 | 800 | 225 | 922 | 0.0 | 573 |
MS.gene00770.t1 | MTR_1g069565 | 43.137 | 816 | 319 | 16 | 122 | 800 | 129 | 936 | 0.0 | 564 |
MS.gene00770.t1 | MTR_5g047620 | 47.401 | 654 | 270 | 17 | 211 | 800 | 152 | 795 | 5.82e-179 | 535 |
MS.gene00770.t1 | MTR_2g024240 | 82.918 | 281 | 44 | 2 | 485 | 765 | 112 | 388 | 2.68e-165 | 484 |
MS.gene00770.t1 | MTR_2g024240 | 91.753 | 97 | 7 | 1 | 305 | 400 | 1 | 97 | 1.44e-51 | 185 |
MS.gene00770.t1 | MTR_1g114150 | 44.389 | 606 | 277 | 13 | 137 | 691 | 343 | 939 | 1.37e-153 | 473 |
MS.gene00770.t1 | MTR_0020s0100 | 43.106 | 631 | 295 | 19 | 199 | 785 | 81 | 691 | 6.44e-150 | 456 |
MS.gene00770.t1 | MTR_1g083120 | 34.933 | 750 | 398 | 14 | 113 | 803 | 176 | 894 | 8.99e-142 | 442 |
MS.gene00770.t1 | MTR_1g083120 | 34.933 | 750 | 398 | 14 | 113 | 803 | 193 | 911 | 1.46e-141 | 442 |
MS.gene00770.t1 | MTR_7g117445 | 40.377 | 530 | 276 | 9 | 137 | 629 | 140 | 666 | 5.25e-129 | 407 |
MS.gene00770.t1 | MTR_7g117445 | 47.170 | 159 | 72 | 3 | 583 | 741 | 719 | 865 | 1.91e-32 | 135 |
MS.gene00770.t1 | MTR_7g117445 | 40.377 | 530 | 276 | 9 | 137 | 629 | 140 | 666 | 1.07e-128 | 407 |
MS.gene00770.t1 | MTR_7g117445 | 51.364 | 220 | 95 | 3 | 583 | 802 | 719 | 926 | 7.64e-58 | 213 |
MS.gene00770.t1 | MTR_7g117445 | 40.377 | 530 | 276 | 9 | 137 | 629 | 140 | 666 | 1.17e-128 | 407 |
MS.gene00770.t1 | MTR_7g117445 | 51.364 | 220 | 95 | 3 | 583 | 802 | 719 | 926 | 7.69e-58 | 213 |
MS.gene00770.t1 | MTR_7g117445 | 40.377 | 530 | 276 | 9 | 137 | 629 | 140 | 666 | 1.64e-128 | 408 |
MS.gene00770.t1 | MTR_7g117445 | 51.364 | 220 | 95 | 4 | 583 | 802 | 719 | 926 | 8.42e-58 | 214 |
MS.gene00770.t1 | MTR_1g083120 | 34.522 | 701 | 368 | 15 | 113 | 753 | 176 | 845 | 2.02e-124 | 394 |
MS.gene00770.t1 | MTR_1g083120 | 34.638 | 690 | 361 | 14 | 113 | 743 | 176 | 834 | 3.51e-124 | 394 |
MS.gene00770.t1 | MTR_1g008060 | 42.197 | 519 | 252 | 13 | 137 | 632 | 861 | 1354 | 5.49e-112 | 375 |
MS.gene00770.t1 | MTR_1g008060 | 62.581 | 155 | 58 | 0 | 651 | 805 | 1537 | 1691 | 8.90e-56 | 209 |
MS.gene00770.t1 | MTR_1g008060 | 42.197 | 519 | 252 | 13 | 137 | 632 | 870 | 1363 | 7.14e-112 | 375 |
MS.gene00770.t1 | MTR_1g008060 | 62.581 | 155 | 58 | 0 | 651 | 805 | 1546 | 1700 | 9.86e-56 | 209 |
MS.gene00770.t1 | MTR_2g011630 | 31.572 | 757 | 418 | 13 | 135 | 799 | 205 | 953 | 1.08e-109 | 358 |
MS.gene00770.t1 | MTR_8g465700 | 80.500 | 200 | 31 | 3 | 417 | 614 | 1 | 194 | 3.59e-100 | 311 |
MS.gene00770.t1 | MTR_2g011630 | 31.609 | 696 | 374 | 11 | 199 | 799 | 21 | 709 | 3.60e-100 | 327 |
MS.gene00770.t1 | MTR_2g011630 | 31.609 | 696 | 374 | 11 | 199 | 799 | 53 | 741 | 6.94e-100 | 327 |
MS.gene00770.t1 | MTR_8g465720 | 66.138 | 189 | 13 | 3 | 631 | 809 | 18 | 165 | 8.27e-73 | 235 |
MS.gene00770.t1 | MTR_8g062940 | 34.211 | 342 | 204 | 7 | 137 | 469 | 33 | 362 | 5.70e-50 | 180 |
MS.gene00770.t1 | MTR_4g091520 | 35.621 | 306 | 173 | 4 | 341 | 627 | 648 | 948 | 5.50e-47 | 181 |
MS.gene00770.t1 | MTR_4g091520 | 34.146 | 246 | 146 | 7 | 135 | 367 | 258 | 500 | 2.56e-31 | 132 |
MS.gene00770.t1 | MTR_4g091520 | 35.621 | 306 | 173 | 4 | 341 | 627 | 683 | 983 | 6.04e-47 | 181 |
MS.gene00770.t1 | MTR_4g091520 | 34.146 | 246 | 146 | 7 | 135 | 367 | 258 | 500 | 3.07e-31 | 132 |
MS.gene00770.t1 | MTR_4g091520 | 35.621 | 306 | 173 | 4 | 341 | 627 | 718 | 1018 | 6.65e-47 | 181 |
MS.gene00770.t1 | MTR_4g091520 | 43.005 | 193 | 92 | 3 | 627 | 802 | 1087 | 1278 | 7.00e-41 | 162 |
MS.gene00770.t1 | MTR_4g091520 | 34.146 | 246 | 146 | 7 | 135 | 367 | 258 | 500 | 4.49e-31 | 132 |
MS.gene00770.t1 | MTR_4g091520 | 35.621 | 306 | 173 | 4 | 341 | 627 | 718 | 1018 | 7.02e-47 | 181 |
MS.gene00770.t1 | MTR_4g091520 | 34.146 | 246 | 146 | 7 | 135 | 367 | 258 | 500 | 3.64e-31 | 132 |
MS.gene00770.t1 | MTR_0295s0020 | 48.101 | 158 | 82 | 0 | 475 | 632 | 9 | 166 | 5.40e-45 | 160 |
MS.gene00770.t1 | MTR_8g013920 | 63.218 | 87 | 28 | 2 | 512 | 598 | 40 | 122 | 7.61e-29 | 114 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene00770.t1 | AT1G11950 | 54.326 | 705 | 294 | 9 | 117 | 803 | 177 | 871 | 0.0 | 779 |
MS.gene00770.t1 | AT1G11950 | 54.326 | 705 | 294 | 9 | 117 | 803 | 177 | 871 | 0.0 | 779 |
MS.gene00770.t1 | AT1G62310 | 53.142 | 732 | 310 | 9 | 82 | 784 | 151 | 878 | 0.0 | 760 |
MS.gene00770.t1 | AT1G11950 | 51.969 | 635 | 277 | 9 | 117 | 733 | 177 | 801 | 0.0 | 662 |
MS.gene00770.t1 | AT3G07610 | 47.590 | 498 | 215 | 9 | 335 | 801 | 410 | 892 | 4.35e-140 | 440 |
MS.gene00770.t1 | AT3G07610 | 42.781 | 187 | 102 | 4 | 137 | 319 | 155 | 340 | 9.25e-37 | 149 |
MS.gene00770.t1 | AT3G07610 | 44.874 | 517 | 223 | 10 | 335 | 801 | 410 | 914 | 1.84e-130 | 415 |
MS.gene00770.t1 | AT3G07610 | 42.781 | 187 | 102 | 4 | 137 | 319 | 155 | 340 | 1.04e-36 | 149 |
MS.gene00770.t1 | AT4G00990 | 42.043 | 509 | 256 | 12 | 136 | 619 | 79 | 573 | 1.80e-120 | 382 |
MS.gene00770.t1 | AT4G00990 | 59.375 | 96 | 39 | 0 | 654 | 749 | 683 | 778 | 1.34e-30 | 129 |
MS.gene00770.t1 | AT4G00990 | 42.043 | 509 | 256 | 12 | 136 | 619 | 79 | 573 | 3.01e-120 | 381 |
MS.gene00770.t1 | AT4G00990 | 63.636 | 88 | 32 | 0 | 654 | 741 | 683 | 770 | 8.23e-30 | 127 |
MS.gene00770.t1 | AT4G00990 | 42.043 | 509 | 256 | 12 | 136 | 619 | 79 | 573 | 4.85e-120 | 382 |
MS.gene00770.t1 | AT4G00990 | 57.516 | 153 | 65 | 0 | 654 | 806 | 683 | 835 | 1.71e-52 | 197 |
MS.gene00770.t1 | AT1G09060 | 32.099 | 729 | 392 | 14 | 137 | 803 | 206 | 893 | 6.87e-115 | 371 |
MS.gene00770.t1 | AT1G09060 | 32.099 | 729 | 392 | 14 | 137 | 803 | 206 | 893 | 6.87e-115 | 371 |
MS.gene00770.t1 | AT1G09060 | 32.099 | 729 | 392 | 14 | 137 | 803 | 220 | 907 | 8.89e-115 | 371 |
MS.gene00770.t1 | AT1G09060 | 32.099 | 729 | 392 | 14 | 137 | 803 | 220 | 907 | 8.89e-115 | 371 |
MS.gene00770.t1 | AT4G21430 | 28.630 | 730 | 425 | 18 | 137 | 807 | 227 | 919 | 1.21e-82 | 284 |
MS.gene00770.t1 | AT3G07610 | 41.581 | 291 | 140 | 6 | 335 | 605 | 410 | 690 | 6.13e-59 | 214 |
MS.gene00770.t1 | AT3G07610 | 42.781 | 187 | 102 | 4 | 137 | 319 | 155 | 340 | 3.07e-36 | 147 |
Find 132 sgRNAs with CRISPR-Local
Find 187 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGAAGTTATACCTTGTATTT+TGG | 0.175006 | 2.3:-64514616 | None:intergenic |
AAGATTAAAATTTATATAAA+AGG | 0.198623 | 2.3:+64513613 | MS.gene00770:CDS |
CCACAACCACCTAGTTCTTT+TGG | 0.232816 | 2.3:-64515247 | None:intergenic |
ATAAGTATGCCTAAATTCTT+TGG | 0.242870 | 2.3:-64516448 | None:intergenic |
CATATTTCAAAGGAACATTT+AGG | 0.255943 | 2.3:-64515025 | None:intergenic |
GATATCTCCAATTGACATAT+TGG | 0.276410 | 2.3:-64514300 | None:intergenic |
TCTCTTGCCCTGTGATTCTT+AGG | 0.277632 | 2.3:-64517018 | None:intergenic |
AAGAAGAGAAGAGTTGAAAA+TGG | 0.299932 | 2.3:+64513781 | MS.gene00770:CDS |
AGGAATGTTGGATAATATAT+TGG | 0.300780 | 2.3:+64513945 | MS.gene00770:CDS |
GAGGGTCTTGTTCAAGATAA+TGG | 0.306737 | 2.3:+64516312 | MS.gene00770:CDS |
ATATCTCCAATTGACATATT+GGG | 0.312488 | 2.3:-64514299 | None:intergenic |
TTACTTGTATCACAAGTTAT+TGG | 0.332796 | 2.3:-64515157 | None:intergenic |
GAAAACACTCCAAAGAATTT+AGG | 0.338721 | 2.3:+64516439 | MS.gene00770:CDS |
AGTACCATAGTTCTTTGATT+TGG | 0.344680 | 2.3:-64513821 | None:intergenic |
AGATGGGAGGATATCTAAAT+TGG | 0.352006 | 2.3:+64515303 | MS.gene00770:CDS |
AAGAAGCTAGAGGAAGAGTT+TGG | 0.361005 | 2.3:+64516624 | MS.gene00770:CDS |
TGACCAAGTTGTTAAAGAAT+TGG | 0.364202 | 2.3:+64517191 | MS.gene00770:CDS |
ATCACTATTCACATTCCATT+TGG | 0.366620 | 2.3:-64515206 | None:intergenic |
AGAAACAGCTGGTGCACTTT+GGG | 0.368153 | 2.3:+64516371 | MS.gene00770:CDS |
CTTCCAATTCTTTAACAACT+TGG | 0.368676 | 2.3:-64517194 | None:intergenic |
CAGATGTCAAGTGACCTTAT+AGG | 0.384738 | 2.3:+64515433 | MS.gene00770:CDS |
AGTTGCCACCAAATGTTATA+AGG | 0.385343 | 2.3:+64515980 | MS.gene00770:CDS |
TCCTCTGCCAAGCTCTTCTC+TGG | 0.390375 | 2.3:-64516040 | None:intergenic |
GACACTCGCCAGTTCTTTGA+AGG | 0.395120 | 2.3:+64515781 | MS.gene00770:CDS |
AAAGAATTGGAAGCTTTCAT+TGG | 0.399008 | 2.3:+64517204 | MS.gene00770:CDS |
TTGTGATACAAGTAATTTAG+AGG | 0.403494 | 2.3:+64515165 | MS.gene00770:CDS |
ATTGCAATTCTTACGGCAAA+AGG | 0.411110 | 2.3:-64514336 | None:intergenic |
GTTTAAGATGTATTAAAGAT+TGG | 0.412154 | 2.3:+64514156 | MS.gene00770:CDS |
ATCAAAATGCTCAAGAGATT+CGG | 0.413063 | 2.3:+64513750 | MS.gene00770:CDS |
GTTGGGAGCCAATGGTTACT+TGG | 0.413326 | 2.3:+64515542 | MS.gene00770:CDS |
AGAACGTCAAATATTAGAAT+AGG | 0.416132 | 2.3:-64515499 | None:intergenic |
ATTTAGGACAGCTTCTATAA+AGG | 0.417061 | 2.3:-64515009 | None:intergenic |
CATTGCAATTGCAATTCTTA+CGG | 0.420522 | 2.3:-64514343 | None:intergenic |
TTATCATGACATGGAGTTTG+TGG | 0.423540 | 2.3:-64514741 | None:intergenic |
ATTACCAAATCAAAGAACTA+TGG | 0.426043 | 2.3:+64513817 | MS.gene00770:CDS |
CTTTATAACCTTCAAAGAAC+TGG | 0.427941 | 2.3:-64515789 | None:intergenic |
TGTACAGGCTATTGATTGCT+TGG | 0.428553 | 2.3:+64515618 | MS.gene00770:CDS |
GAGCACATAAGGCTCAAGAT+AGG | 0.434348 | 2.3:+64516286 | MS.gene00770:CDS |
AAGTCAGGCCTTATAACATT+TGG | 0.438608 | 2.3:-64515988 | None:intergenic |
CACCGTTCCTCCAATACTCT+TGG | 0.440918 | 2.3:-64515474 | None:intergenic |
ACTTTGCAGTATCTTCTCTT+CGG | 0.452091 | 2.3:-64516401 | None:intergenic |
CAGAAACAGCTGGTGCACTT+TGG | 0.453707 | 2.3:+64516370 | MS.gene00770:CDS |
ATGTTGAGATATTTACCAAA+TGG | 0.459203 | 2.3:+64515191 | MS.gene00770:CDS |
AATGAGTATTGTATATGATT+CGG | 0.460302 | 2.3:+64513582 | None:intergenic |
TATTTAAATTCCAAGAGTAT+TGG | 0.460840 | 2.3:+64515464 | MS.gene00770:CDS |
AATTTAGATATCCTCCCATC+TGG | 0.461007 | 2.3:-64515301 | None:intergenic |
GTATTTCTTTGCAACAACTA+AGG | 0.462093 | 2.3:-64515048 | None:intergenic |
AATGTTTGCTTGTGTTCAAA+AGG | 0.473646 | 2.3:+64514362 | MS.gene00770:CDS |
AGGTACCCCAATATGTCAAT+TGG | 0.473897 | 2.3:+64514293 | MS.gene00770:intron |
GGATCGCAATACTCTTGAAA+TGG | 0.475406 | 2.3:-64515928 | None:intergenic |
TTAAATTCCAAGAGTATTGG+AGG | 0.475955 | 2.3:+64515467 | MS.gene00770:CDS |
AAATGATAATTCAAATGTAC+AGG | 0.476218 | 2.3:+64515603 | MS.gene00770:CDS |
TTGCAATTCTTACGGCAAAA+GGG | 0.477440 | 2.3:-64514335 | None:intergenic |
CACAAGAAAATAAAACTTGA+AGG | 0.478550 | 2.3:+64513853 | MS.gene00770:CDS |
TTATTGTTCTCCAGTAAAAG+AGG | 0.483787 | 2.3:+64516467 | MS.gene00770:CDS |
GTAGTAAATTAATCATATAT+CGG | 0.484803 | 2.3:-64514539 | None:intergenic |
GACGTTCTCAAACAAGGGAC+AGG | 0.489842 | 2.3:+64515514 | MS.gene00770:CDS |
GTCAAGAAGCAAAGGAATGT+TGG | 0.491438 | 2.3:+64513933 | MS.gene00770:CDS |
GTTCTTTGAAGGTTATAAAG+AGG | 0.497551 | 2.3:+64515792 | MS.gene00770:CDS |
TTTGTGATAGATGGCACAAA+AGG | 0.498165 | 2.3:-64516339 | None:intergenic |
GTCGACTTCCTAAGAATCAC+AGG | 0.505039 | 2.3:+64517010 | MS.gene00770:CDS |
ACACCTTCAGATTTCTCACT+TGG | 0.506166 | 2.3:-64516799 | None:intergenic |
GTGTTCAAAAGGAATGATCA+AGG | 0.509692 | 2.3:+64514373 | MS.gene00770:CDS |
AACAAGGGACAGGATTGAGT+TGG | 0.510060 | 2.3:+64515524 | MS.gene00770:CDS |
ACAAACTCCATGTCATGATA+AGG | 0.516847 | 2.3:+64514743 | MS.gene00770:CDS |
ATGTCATCAGTGCTTGAGAA+AGG | 0.520090 | 2.3:+64514088 | MS.gene00770:CDS |
TGGTTGTGGTGGCTGTGTGA+TGG | 0.522574 | 2.3:+64515261 | MS.gene00770:CDS |
AGGATTGAGTTGGGAGCCAA+TGG | 0.523462 | 2.3:+64515534 | MS.gene00770:CDS |
TTCAGATTTCTCACTTGGTG+AGG | 0.524957 | 2.3:-64516794 | None:intergenic |
AGCACATAAGGCTCAAGATA+GGG | 0.524973 | 2.3:+64516287 | MS.gene00770:CDS |
GAGTATTGCGATCCTCGAGC+TGG | 0.528942 | 2.3:+64515937 | MS.gene00770:CDS |
TCAGGCCTTATAACATTTGG+TGG | 0.529368 | 2.3:-64515985 | None:intergenic |
GTATCACAAGTTATTGGTAG+AGG | 0.529567 | 2.3:-64515151 | None:intergenic |
ACAAGGGACAGGATTGAGTT+GGG | 0.531143 | 2.3:+64515525 | MS.gene00770:CDS |
TCAGATTTCTCACTTGGTGA+GGG | 0.534163 | 2.3:-64516793 | None:intergenic |
ATGATAAGGAGCGTATGTAT+TGG | 0.537974 | 2.3:+64514757 | MS.gene00770:CDS |
ACCAGAGAAGAGCTTGGCAG+AGG | 0.538284 | 2.3:+64516039 | MS.gene00770:CDS |
CTGAAGCGCATTCTTCCAGA+TGG | 0.539199 | 2.3:+64515286 | MS.gene00770:CDS |
ATATTTGACGTTCTCAAACA+AGG | 0.544534 | 2.3:+64515508 | MS.gene00770:CDS |
CTTTGTGTCACCAGAAAATG+TGG | 0.546636 | 2.3:+64516957 | MS.gene00770:CDS |
TGCAATTCTTACGGCAAAAG+GGG | 0.547428 | 2.3:-64514334 | None:intergenic |
GAGATTGAAGCCAAAATACA+AGG | 0.547821 | 2.3:+64514606 | MS.gene00770:CDS |
ACTTGGTGAGGGCATCCAGC+AGG | 0.549347 | 2.3:-64516782 | None:intergenic |
AATGTTATAAGGCCTGACTT+AGG | 0.554124 | 2.3:+64515991 | MS.gene00770:CDS |
TTCTTTGAAGGTTATAAAGA+GGG | 0.554859 | 2.3:+64515793 | MS.gene00770:CDS |
TTCCAAGAGTATTGGAGGAA+CGG | 0.556361 | 2.3:+64515472 | MS.gene00770:CDS |
TATTTGACGTTCTCAAACAA+GGG | 0.560423 | 2.3:+64515509 | MS.gene00770:CDS |
CCAAAAGAACTAGGTGGTTG+TGG | 0.561255 | 2.3:+64515247 | MS.gene00770:CDS |
ACAACTAAGGCATATTTCAA+AGG | 0.561651 | 2.3:-64515035 | None:intergenic |
AATGCTCTCCAAGTAACCAT+TGG | 0.575828 | 2.3:-64515550 | None:intergenic |
TGAAACTTCATTTCAAAGCG+TGG | 0.577340 | 2.3:-64515088 | None:intergenic |
TGATTGCTTGGCTAGTTGTG+AGG | 0.579197 | 2.3:+64515630 | MS.gene00770:CDS |
TAACAACTTGGTCAACAGCA+TGG | 0.580070 | 2.3:-64517182 | None:intergenic |
ATGACAAAGTCAAGAAGCAA+AGG | 0.583092 | 2.3:+64513925 | MS.gene00770:CDS |
AGATGCTCAAGCTAAAAGAC+TGG | 0.588373 | 2.3:+64515842 | MS.gene00770:CDS |
TAAGGCTCAAGATAGGGAAG+AGG | 0.594993 | 2.3:+64516293 | MS.gene00770:CDS |
AAATGGAATGTGAATAGTGA+TGG | 0.595578 | 2.3:+64515208 | MS.gene00770:CDS |
TTGGTGGCAACTTTGCAGCA+AGG | 0.598809 | 2.3:-64515969 | None:intergenic |
AACGGATAAACTCGTCACAA+TGG | 0.599920 | 2.3:-64515900 | None:intergenic |
AAAGATACATCAGAAACAGC+TGG | 0.604136 | 2.3:+64516360 | MS.gene00770:CDS |
GGTATCTCAATCTCTGAACA+TGG | 0.604496 | 2.3:-64514720 | None:intergenic |
GAAGCAGTATTTATACCTGC+TGG | 0.606997 | 2.3:+64516767 | MS.gene00770:CDS |
TAAGGTCACTTGACATCTGA+CGG | 0.610508 | 2.3:-64515429 | None:intergenic |
TATCTCCAATTGACATATTG+GGG | 0.611778 | 2.3:-64514298 | None:intergenic |
TATGGAACCAGAGAAGAGCT+TGG | 0.615802 | 2.3:+64516033 | MS.gene00770:CDS |
TGTGATACAAGTAATTTAGA+GGG | 0.619079 | 2.3:+64515166 | MS.gene00770:CDS |
AAAACAAAAGAATGTTGAGA+CGG | 0.619556 | 2.3:+64515369 | MS.gene00770:CDS |
AAGGCTCAAGATAGGGAAGA+GGG | 0.620022 | 2.3:+64516294 | MS.gene00770:CDS |
AGTTTCTGCTCAAAAGTCAA+AGG | 0.620576 | 2.3:-64516740 | None:intergenic |
TTTGTACAAGATACAAATTG+TGG | 0.620905 | 2.3:-64514116 | None:intergenic |
TGAGCATAAGAAGAAGCTAG+AGG | 0.629510 | 2.3:+64516614 | MS.gene00770:CDS |
GAATGTGCTCCAAAAGAACT+AGG | 0.632610 | 2.3:+64515238 | MS.gene00770:CDS |
TCACCAAGTGAGAAATCTGA+AGG | 0.633939 | 2.3:+64516796 | MS.gene00770:CDS |
ATCAGTGCTTGAGAAAGGAT+AGG | 0.639946 | 2.3:+64514093 | MS.gene00770:CDS |
CCATTGTGATATTGCAGACG+CGG | 0.646331 | 2.3:+64516080 | MS.gene00770:CDS |
AGCGCATTCTTCCAGATGGG+AGG | 0.648445 | 2.3:+64515290 | MS.gene00770:CDS |
ACTCTTGAAATGGCAAACAA+CGG | 0.653289 | 2.3:-64515918 | None:intergenic |
TGAAGCGCATTCTTCCAGAT+GGG | 0.654134 | 2.3:+64515287 | MS.gene00770:CDS |
ATACGCTCCTTATCATGACA+TGG | 0.656480 | 2.3:-64514750 | None:intergenic |
AGGTTGAGAATTCCAGCTCG+AGG | 0.678355 | 2.3:-64515949 | None:intergenic |
CCGCGTCTGCAATATCACAA+TGG | 0.685598 | 2.3:-64516080 | None:intergenic |
TGTTGCAAAGAAATACGCAA+CGG | 0.692822 | 2.3:+64515055 | MS.gene00770:CDS |
GGTCTTGTTCAAGATAATGG+AGG | 0.703775 | 2.3:+64516315 | MS.gene00770:CDS |
AAAGAACTAGGTGGTTGTGG+TGG | 0.707130 | 2.3:+64515250 | MS.gene00770:CDS |
AGAGGTGATGAATACATGCA+TGG | 0.707440 | 2.3:+64515121 | MS.gene00770:CDS |
ATAAACTCGTCACAATGGCG+CGG | 0.715284 | 2.3:-64515895 | None:intergenic |
TCGACTTCCTAAGAATCACA+GGG | 0.715729 | 2.3:+64517011 | MS.gene00770:CDS |
CAATTGGAGATATCGCAGAG+AGG | 0.732707 | 2.3:+64514309 | MS.gene00770:CDS |
GGCAAGAGAAGACAAACTTG+AGG | 0.737690 | 2.3:+64517032 | MS.gene00770:CDS |
AAATTGGTAACAAAAGCTCG+CGG | 0.750601 | 2.3:+64515319 | MS.gene00770:CDS |
TGTGCTCCAAAAGAACTAGG+TGG | 0.792037 | 2.3:+64515241 | MS.gene00770:CDS |
GGTGATGAATACATGCATGG+TGG | 0.798300 | 2.3:+64515124 | MS.gene00770:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TAATTATTGTGTTTATTTAT+GGG | + | chr2.3:64517112-64517131 | MS.gene00770:intron | 10.0% |
!! | TTAATTATTGTGTTTATTTA+TGG | + | chr2.3:64517111-64517130 | MS.gene00770:intron | 10.0% |
!! | TTATAAAGAGAAATAAATAT+TGG | - | chr2.3:64515742-64515761 | None:intergenic | 10.0% |
!! | AATTATTGTGTTTATTTATG+GGG | + | chr2.3:64517113-64517132 | MS.gene00770:intron | 15.0% |
!! | AATTTGTGTTAAATAATTAC+AGG | + | chr2.3:64514043-64514062 | MS.gene00770:intron | 15.0% |
!! | GTAGTAAATTAATCATATAT+CGG | - | chr2.3:64514542-64514561 | None:intergenic | 15.0% |
!!! | TCTTTTGTATTTTGTTTTTT+TGG | + | chr2.3:64514954-64514973 | MS.gene00770:intron | 15.0% |
!! | AAATGATAATTCAAATGTAC+AGG | + | chr2.3:64515603-64515622 | MS.gene00770:CDS | 20.0% |
!! | AAGTTTCAATACAAAAATAG+AGG | + | chr2.3:64515103-64515122 | MS.gene00770:CDS | 20.0% |
!! | ATTATTGTGTTTATTTATGG+GGG | + | chr2.3:64517114-64517133 | MS.gene00770:intron | 20.0% |
!! | CAAAAGTCAAATAAAAACAT+TGG | - | chr2.3:64516596-64516615 | None:intergenic | 20.0% |
!! | CATTAGAGAAACAAATTTAA+GGG | - | chr2.3:64514423-64514442 | None:intergenic | 20.0% |
!! | GAAGAAGATATAAAAATTTC+TGG | + | chr2.3:64515815-64515834 | MS.gene00770:CDS | 20.0% |
!! | GATTCTTAATCAATTATTAC+AGG | + | chr2.3:64516710-64516729 | MS.gene00770:intron | 20.0% |
!! | TCATTAGAGAAACAAATTTA+AGG | - | chr2.3:64514424-64514443 | None:intergenic | 20.0% |
!!! | AAAAATAAAAAGAGCACATA+AGG | + | chr2.3:64516275-64516294 | MS.gene00770:CDS | 20.0% |
!!! | ACATGTTTTGATATTTTGTT+TGG | - | chr2.3:64514072-64514091 | None:intergenic | 20.0% |
!!! | GTTTAAGATGTATTAAAGAT+TGG | + | chr2.3:64514156-64514175 | MS.gene00770:CDS | 20.0% |
!!! | TAAATAGCTTTTTTCCTATA+AGG | - | chr2.3:64515450-64515469 | None:intergenic | 20.0% |
!!! | TAAATTTTCCAAACTATTAC+TGG | + | chr2.3:64514856-64514875 | MS.gene00770:intron | 20.0% |
!!! | TAATAAAATACCTCTTTTAC+TGG | - | chr2.3:64516480-64516499 | None:intergenic | 20.0% |
!!! | TATTGTTCAATAATTTTGAC+AGG | + | chr2.3:64516191-64516210 | MS.gene00770:intron | 20.0% |
!!! | TATTTAAATTCCAAGAGTAT+TGG | + | chr2.3:64515464-64515483 | MS.gene00770:CDS | 20.0% |
!!! | TCACATATAATCAACATTTT+CGG | + | chr2.3:64516500-64516519 | MS.gene00770:intron | 20.0% |
!!! | TTTTTTTCATTTTTGCACAT+AGG | + | chr2.3:64514273-64514292 | MS.gene00770:intron | 20.0% |
! | AAAACAAAAGAATGTTGAGA+CGG | + | chr2.3:64515369-64515388 | MS.gene00770:CDS | 25.0% |
! | AACCAAAATAGTTGTCATAA+AGG | - | chr2.3:64514000-64514019 | None:intergenic | 25.0% |
! | AGAACGTCAAATATTAGAAT+AGG | - | chr2.3:64515502-64515521 | None:intergenic | 25.0% |
! | AGGAATGTTGGATAATATAT+TGG | + | chr2.3:64513945-64513964 | MS.gene00770:CDS | 25.0% |
! | ATAAGTATGCCTAAATTCTT+TGG | - | chr2.3:64516451-64516470 | None:intergenic | 25.0% |
! | ATATCTCCAATTGACATATT+GGG | - | chr2.3:64514302-64514321 | None:intergenic | 25.0% |
! | ATATGAGAGTTTATTGTTAG+TGG | - | chr2.3:64514692-64514711 | None:intergenic | 25.0% |
! | ATGTTGAGATATTTACCAAA+TGG | + | chr2.3:64515191-64515210 | MS.gene00770:CDS | 25.0% |
! | ATTACCAAATCAAAGAACTA+TGG | + | chr2.3:64513817-64513836 | MS.gene00770:CDS | 25.0% |
! | CACAAGAAAATAAAACTTGA+AGG | + | chr2.3:64513853-64513872 | MS.gene00770:CDS | 25.0% |
! | CACAATAATTAAGCAAAGTT+TGG | - | chr2.3:64517103-64517122 | None:intergenic | 25.0% |
! | CATATTTCAAAGGAACATTT+AGG | - | chr2.3:64515028-64515047 | None:intergenic | 25.0% |
! | TAAAAACATTGGTCATGAAT+AGG | - | chr2.3:64516585-64516604 | None:intergenic | 25.0% |
! | TAACAATAAACTCTCATATC+AGG | + | chr2.3:64514693-64514712 | MS.gene00770:intron | 25.0% |
! | TATTAACAAATATGTGACCT+TGG | - | chr2.3:64514212-64514231 | None:intergenic | 25.0% |
! | TCAAAAATTAAGCAAAGAGA+TGG | - | chr2.3:64514567-64514586 | None:intergenic | 25.0% |
! | TGCAACATAGTAAGTATAAA+AGG | - | chr2.3:64514801-64514820 | None:intergenic | 25.0% |
! | TGTGATACAAGTAATTTAGA+GGG | + | chr2.3:64515166-64515185 | MS.gene00770:CDS | 25.0% |
! | TTACTTGTATCACAAGTTAT+TGG | - | chr2.3:64515160-64515179 | None:intergenic | 25.0% |
! | TTGTGATACAAGTAATTTAG+AGG | + | chr2.3:64515165-64515184 | MS.gene00770:CDS | 25.0% |
! | TTTCAATTTCAACGCTATAT+TGG | + | chr2.3:64516135-64516154 | MS.gene00770:intron | 25.0% |
! | TTTCGTAGTTAAATTTCCTT+TGG | + | chr2.3:64515658-64515677 | MS.gene00770:intron | 25.0% |
! | TTTGTACAAGATACAAATTG+TGG | - | chr2.3:64514119-64514138 | None:intergenic | 25.0% |
!! | ACATTTTCAAACTCATCATA+AGG | - | chr2.3:64515871-64515890 | None:intergenic | 25.0% |
!! | ATCAACAATCTGAGTTTTTA+AGG | + | chr2.3:64513644-64513663 | MS.gene00770:CDS | 25.0% |
!! | GTGATATTTTTCTATGAAAC+AGG | + | chr2.3:64517143-64517162 | MS.gene00770:intron | 25.0% |
!! | TGAAGTTATACCTTGTATTT+TGG | - | chr2.3:64514619-64514638 | None:intergenic | 25.0% |
!! | TTCCTTTATGACAACTATTT+TGG | + | chr2.3:64513995-64514014 | MS.gene00770:intron | 25.0% |
!! | TTCTTTGAAGGTTATAAAGA+GGG | + | chr2.3:64515793-64515812 | MS.gene00770:CDS | 25.0% |
!!! | ACATACATGTACTTTTAAAG+AGG | - | chr2.3:64516845-64516864 | None:intergenic | 25.0% |
!!! | TATTTTGACTCATATAACTG+AGG | + | chr2.3:64516218-64516237 | MS.gene00770:CDS | 25.0% |
AAAGAATTGGAAGCTTTCAT+TGG | + | chr2.3:64517204-64517223 | MS.gene00770:CDS | 30.0% | |
AAATGGAATGTGAATAGTGA+TGG | + | chr2.3:64515208-64515227 | MS.gene00770:CDS | 30.0% | |
AACCTAAGAAACAAAGAAGT+TGG | - | chr2.3:64516556-64516575 | None:intergenic | 30.0% | |
AAGAAGAGAAGAGTTGAAAA+TGG | + | chr2.3:64513781-64513800 | MS.gene00770:CDS | 30.0% | |
AATGTTTGCTTGTGTTCAAA+AGG | + | chr2.3:64514362-64514381 | MS.gene00770:CDS | 30.0% | |
ACAACTAAGGCATATTTCAA+AGG | - | chr2.3:64515038-64515057 | None:intergenic | 30.0% | |
ACATCTAAATAACCATTCCA+AGG | + | chr2.3:64514192-64514211 | MS.gene00770:intron | 30.0% | |
AGTACCATAGTTCTTTGATT+TGG | - | chr2.3:64513824-64513843 | None:intergenic | 30.0% | |
ATATTTGACGTTCTCAAACA+AGG | + | chr2.3:64515508-64515527 | MS.gene00770:CDS | 30.0% | |
ATCAAAATGCTCAAGAGATT+CGG | + | chr2.3:64513750-64513769 | MS.gene00770:CDS | 30.0% | |
ATCACTATTCACATTCCATT+TGG | - | chr2.3:64515209-64515228 | None:intergenic | 30.0% | |
CATTGCAATTGCAATTCTTA+CGG | - | chr2.3:64514346-64514365 | None:intergenic | 30.0% | |
CCAAAAACTTACATTGCTTA+TGG | + | chr2.3:64516015-64516034 | MS.gene00770:CDS | 30.0% | |
CTTCCAATTCTTTAACAACT+TGG | - | chr2.3:64517197-64517216 | None:intergenic | 30.0% | |
CTTTATAACCTTCAAAGAAC+TGG | - | chr2.3:64515792-64515811 | None:intergenic | 30.0% | |
GAAAACACTCCAAAGAATTT+AGG | + | chr2.3:64516439-64516458 | MS.gene00770:CDS | 30.0% | |
GATATCTCCAATTGACATAT+TGG | - | chr2.3:64514303-64514322 | None:intergenic | 30.0% | |
GTATTTCTTTGCAACAACTA+AGG | - | chr2.3:64515051-64515070 | None:intergenic | 30.0% | |
TATCTCCAATTGACATATTG+GGG | - | chr2.3:64514301-64514320 | None:intergenic | 30.0% | |
TATTTGACGTTCTCAAACAA+GGG | + | chr2.3:64515509-64515528 | MS.gene00770:CDS | 30.0% | |
TGACCAAGTTGTTAAAGAAT+TGG | + | chr2.3:64517191-64517210 | MS.gene00770:CDS | 30.0% | |
TGGAATTCACATCAAAAGAA+AGG | - | chr2.3:64517083-64517102 | None:intergenic | 30.0% | |
TTATTGTTCTCCAGTAAAAG+AGG | + | chr2.3:64516467-64516486 | MS.gene00770:CDS | 30.0% | |
TTCTCTTTATAAACCTTTGC+AGG | + | chr2.3:64515750-64515769 | MS.gene00770:intron | 30.0% | |
! | ATGCATATATCCACATTTTC+TGG | - | chr2.3:64516970-64516989 | None:intergenic | 30.0% |
! | ATTTAGGACAGCTTCTATAA+AGG | - | chr2.3:64515012-64515031 | None:intergenic | 30.0% |
! | CCATAAGCAATGTAAGTTTT+TGG | - | chr2.3:64516018-64516037 | None:intergenic | 30.0% |
! | GATGTATCTTTTGTGATAGA+TGG | - | chr2.3:64516351-64516370 | None:intergenic | 30.0% |
! | GTTCTTTGAAGGTTATAAAG+AGG | + | chr2.3:64515792-64515811 | MS.gene00770:CDS | 30.0% |
! | TTTTCAAACTCATCATAAGG+TGG | - | chr2.3:64515868-64515887 | None:intergenic | 30.0% |
!! | TTAAATTCCAAGAGTATTGG+AGG | + | chr2.3:64515467-64515486 | MS.gene00770:CDS | 30.0% |
!! | TTTTGAAGATGAAGAAGATG+AGG | + | chr2.3:64513885-64513904 | MS.gene00770:CDS | 30.0% |
AAAGATACATCAGAAACAGC+TGG | + | chr2.3:64516360-64516379 | MS.gene00770:CDS | 35.0% | |
AATGTTATAAGGCCTGACTT+AGG | + | chr2.3:64515991-64516010 | MS.gene00770:CDS | 35.0% | |
AATTTAGATATCCTCCCATC+TGG | - | chr2.3:64515304-64515323 | None:intergenic | 35.0% | |
ACAAACTCCATGTCATGATA+AGG | + | chr2.3:64514743-64514762 | MS.gene00770:CDS | 35.0% | |
ACAAATATGTGACCTTGGAA+TGG | - | chr2.3:64514207-64514226 | None:intergenic | 35.0% | |
ACTCTTGAAATGGCAAACAA+CGG | - | chr2.3:64515921-64515940 | None:intergenic | 35.0% | |
ACTTTGCAGTATCTTCTCTT+CGG | - | chr2.3:64516404-64516423 | None:intergenic | 35.0% | |
AGATGGGAGGATATCTAAAT+TGG | + | chr2.3:64515303-64515322 | MS.gene00770:CDS | 35.0% | |
AGTTGCCACCAAATGTTATA+AGG | + | chr2.3:64515980-64515999 | MS.gene00770:CDS | 35.0% | |
AGTTTCTGCTCAAAAGTCAA+AGG | - | chr2.3:64516743-64516762 | None:intergenic | 35.0% | |
ATGACAAAGTCAAGAAGCAA+AGG | + | chr2.3:64513925-64513944 | MS.gene00770:CDS | 35.0% | |
ATTGCAATTCTTACGGCAAA+AGG | - | chr2.3:64514339-64514358 | None:intergenic | 35.0% | |
CGTCAATACCAGTAATAGTT+TGG | - | chr2.3:64514867-64514886 | None:intergenic | 35.0% | |
GAGATTGAAGCCAAAATACA+AGG | + | chr2.3:64514606-64514625 | MS.gene00770:CDS | 35.0% | |
GTATCACAAGTTATTGGTAG+AGG | - | chr2.3:64515154-64515173 | None:intergenic | 35.0% | |
GTGTTCAAAAGGAATGATCA+AGG | + | chr2.3:64514373-64514392 | MS.gene00770:CDS | 35.0% | |
TGAAACTTCATTTCAAAGCG+TGG | - | chr2.3:64515091-64515110 | None:intergenic | 35.0% | |
TGTTGCAAAGAAATACGCAA+CGG | + | chr2.3:64515055-64515074 | MS.gene00770:CDS | 35.0% | |
TTATCATGACATGGAGTTTG+TGG | - | chr2.3:64514744-64514763 | None:intergenic | 35.0% | |
TTGCAATTCTTACGGCAAAA+GGG | - | chr2.3:64514338-64514357 | None:intergenic | 35.0% | |
TTTGTGATAGATGGCACAAA+AGG | - | chr2.3:64516342-64516361 | None:intergenic | 35.0% | |
! | AAATTGGTAACAAAAGCTCG+CGG | + | chr2.3:64515319-64515338 | MS.gene00770:CDS | 35.0% |
! | AAGTCAGGCCTTATAACATT+TGG | - | chr2.3:64515991-64516010 | None:intergenic | 35.0% |
! | ATGATAAGGAGCGTATGTAT+TGG | + | chr2.3:64514757-64514776 | MS.gene00770:CDS | 35.0% |
! | CACCAACTTCTTTGTTTCTT+AGG | + | chr2.3:64516551-64516570 | MS.gene00770:intron | 35.0% |
! | GTGTCAATTTTTACCTGCAA+AGG | - | chr2.3:64515766-64515785 | None:intergenic | 35.0% |
! | TTGACTTTTGAGCAGAAACT+TGG | + | chr2.3:64516743-64516762 | MS.gene00770:CDS | 35.0% |
!! | TAAGTTTTTGGACCTAAGTC+AGG | - | chr2.3:64516006-64516025 | None:intergenic | 35.0% |
AACGGATAAACTCGTCACAA+TGG | - | chr2.3:64515903-64515922 | None:intergenic | 40.0% | |
AAGAAGCTAGAGGAAGAGTT+TGG | + | chr2.3:64516624-64516643 | MS.gene00770:CDS | 40.0% | |
AATGCTCTCCAAGTAACCAT+TGG | - | chr2.3:64515553-64515572 | None:intergenic | 40.0% | |
ACACCTTCAGATTTCTCACT+TGG | - | chr2.3:64516802-64516821 | None:intergenic | 40.0% | |
AGAGGTGATGAATACATGCA+TGG | + | chr2.3:64515121-64515140 | MS.gene00770:CDS | 40.0% | |
AGATGCTCAAGCTAAAAGAC+TGG | + | chr2.3:64515842-64515861 | MS.gene00770:CDS | 40.0% | |
AGCACATAAGGCTCAAGATA+GGG | + | chr2.3:64516287-64516306 | MS.gene00770:CDS | 40.0% | |
AGGTACCCCAATATGTCAAT+TGG | + | chr2.3:64514293-64514312 | MS.gene00770:intron | 40.0% | |
ATACGCTCCTTATCATGACA+TGG | - | chr2.3:64514753-64514772 | None:intergenic | 40.0% | |
ATCAGTGCTTGAGAAAGGAT+AGG | + | chr2.3:64514093-64514112 | MS.gene00770:CDS | 40.0% | |
ATGTCATCAGTGCTTGAGAA+AGG | + | chr2.3:64514088-64514107 | MS.gene00770:CDS | 40.0% | |
CAGATGTCAAGTGACCTTAT+AGG | + | chr2.3:64515433-64515452 | MS.gene00770:CDS | 40.0% | |
CTTTGTGTCACCAGAAAATG+TGG | + | chr2.3:64516957-64516976 | MS.gene00770:CDS | 40.0% | |
GAAGCAGTATTTATACCTGC+TGG | + | chr2.3:64516767-64516786 | MS.gene00770:CDS | 40.0% | |
GAATGTGCTCCAAAAGAACT+AGG | + | chr2.3:64515238-64515257 | MS.gene00770:CDS | 40.0% | |
GGATCGCAATACTCTTGAAA+TGG | - | chr2.3:64515931-64515950 | None:intergenic | 40.0% | |
GGTATCTCAATCTCTGAACA+TGG | - | chr2.3:64514723-64514742 | None:intergenic | 40.0% | |
GTAAGAACGAACATCACCAA+AGG | - | chr2.3:64515677-64515696 | None:intergenic | 40.0% | |
GTCAAGAAGCAAAGGAATGT+TGG | + | chr2.3:64513933-64513952 | MS.gene00770:CDS | 40.0% | |
TAACAACTTGGTCAACAGCA+TGG | - | chr2.3:64517185-64517204 | None:intergenic | 40.0% | |
TAAGGTCACTTGACATCTGA+CGG | - | chr2.3:64515432-64515451 | None:intergenic | 40.0% | |
TCACCAAGTGAGAAATCTGA+AGG | + | chr2.3:64516796-64516815 | MS.gene00770:CDS | 40.0% | |
TCGACTTCCTAAGAATCACA+GGG | + | chr2.3:64517011-64517030 | MS.gene00770:CDS | 40.0% | |
TGAGCATAAGAAGAAGCTAG+AGG | + | chr2.3:64516614-64516633 | MS.gene00770:CDS | 40.0% | |
TGCAATTCTTACGGCAAAAG+GGG | - | chr2.3:64514337-64514356 | None:intergenic | 40.0% | |
TTGGTGCGACAAGTATAAGA+TGG | + | chr2.3:64516154-64516173 | MS.gene00770:intron | 40.0% | |
! | TCAGATTTCTCACTTGGTGA+GGG | - | chr2.3:64516796-64516815 | None:intergenic | 40.0% |
! | TCAGGCCTTATAACATTTGG+TGG | - | chr2.3:64515988-64516007 | None:intergenic | 40.0% |
! | TGTACAGGCTATTGATTGCT+TGG | + | chr2.3:64515618-64515637 | MS.gene00770:CDS | 40.0% |
! | TTCAGATTTCTCACTTGGTG+AGG | - | chr2.3:64516797-64516816 | None:intergenic | 40.0% |
!! | GAGGGTCTTGTTCAAGATAA+TGG | + | chr2.3:64516312-64516331 | MS.gene00770:CDS | 40.0% |
!! | GGTCTTGTTCAAGATAATGG+AGG | + | chr2.3:64516315-64516334 | MS.gene00770:CDS | 40.0% |
!! | TTCCAAGAGTATTGGAGGAA+CGG | + | chr2.3:64515472-64515491 | MS.gene00770:CDS | 40.0% |
!!! | TCTTTTAGCTTGAGCATCTC+TGG | - | chr2.3:64515841-64515860 | None:intergenic | 40.0% |
AAAGAACTAGGTGGTTGTGG+TGG | + | chr2.3:64515250-64515269 | MS.gene00770:CDS | 45.0% | |
AACAAGGGACAGGATTGAGT+TGG | + | chr2.3:64515524-64515543 | MS.gene00770:CDS | 45.0% | |
AAGGCTCAAGATAGGGAAGA+GGG | + | chr2.3:64516294-64516313 | MS.gene00770:CDS | 45.0% | |
ACAAGGGACAGGATTGAGTT+GGG | + | chr2.3:64515525-64515544 | MS.gene00770:CDS | 45.0% | |
AGAAACAGCTGGTGCACTTT+GGG | + | chr2.3:64516371-64516390 | MS.gene00770:CDS | 45.0% | |
ATAAACTCGTCACAATGGCG+CGG | - | chr2.3:64515898-64515917 | None:intergenic | 45.0% | |
CAATTGGAGATATCGCAGAG+AGG | + | chr2.3:64514309-64514328 | MS.gene00770:CDS | 45.0% | |
CCAAAAGAACTAGGTGGTTG+TGG | + | chr2.3:64515247-64515266 | MS.gene00770:CDS | 45.0% | |
CCATTGTGATATTGCAGACG+CGG | + | chr2.3:64516080-64516099 | MS.gene00770:CDS | 45.0% | |
GAGCACATAAGGCTCAAGAT+AGG | + | chr2.3:64516286-64516305 | MS.gene00770:CDS | 45.0% | |
GGCAAGAGAAGACAAACTTG+AGG | + | chr2.3:64517032-64517051 | MS.gene00770:CDS | 45.0% | |
GGTGATGAATACATGCATGG+TGG | + | chr2.3:64515124-64515143 | MS.gene00770:CDS | 45.0% | |
TAAGGCTCAAGATAGGGAAG+AGG | + | chr2.3:64516293-64516312 | MS.gene00770:CDS | 45.0% | |
TATGGAACCAGAGAAGAGCT+TGG | + | chr2.3:64516033-64516052 | MS.gene00770:CDS | 45.0% | |
TCTCTTGCCCTGTGATTCTT+AGG | - | chr2.3:64517021-64517040 | None:intergenic | 45.0% | |
TGAAGCGCATTCTTCCAGAT+GGG | + | chr2.3:64515287-64515306 | MS.gene00770:CDS | 45.0% | |
TGTGCTCCAAAAGAACTAGG+TGG | + | chr2.3:64515241-64515260 | MS.gene00770:CDS | 45.0% | |
! | GTCGACTTCCTAAGAATCAC+AGG | + | chr2.3:64517010-64517029 | MS.gene00770:CDS | 45.0% |
! | TGATTGCTTGGCTAGTTGTG+AGG | + | chr2.3:64515630-64515649 | MS.gene00770:CDS | 45.0% |
!! | CCACAACCACCTAGTTCTTT+TGG | - | chr2.3:64515250-64515269 | None:intergenic | 45.0% |
!! | AAGATTAAAATTTATATAAA+AGG | + | chr2.3:64513613-64513632 | MS.gene00770:CDS | 5.0% |
AGGTTGAGAATTCCAGCTCG+AGG | - | chr2.3:64515952-64515971 | None:intergenic | 50.0% | |
CACCGTTCCTCCAATACTCT+TGG | - | chr2.3:64515477-64515496 | None:intergenic | 50.0% | |
CAGAAACAGCTGGTGCACTT+TGG | + | chr2.3:64516370-64516389 | MS.gene00770:CDS | 50.0% | |
CCGCGTCTGCAATATCACAA+TGG | - | chr2.3:64516083-64516102 | None:intergenic | 50.0% | |
CTGAAGCGCATTCTTCCAGA+TGG | + | chr2.3:64515286-64515305 | MS.gene00770:CDS | 50.0% | |
GACACTCGCCAGTTCTTTGA+AGG | + | chr2.3:64515781-64515800 | MS.gene00770:CDS | 50.0% | |
GACGTTCTCAAACAAGGGAC+AGG | + | chr2.3:64515514-64515533 | MS.gene00770:CDS | 50.0% | |
GTTGGGAGCCAATGGTTACT+TGG | + | chr2.3:64515542-64515561 | MS.gene00770:CDS | 50.0% | |
! | TTGGTGGCAACTTTGCAGCA+AGG | - | chr2.3:64515972-64515991 | None:intergenic | 50.0% |
!! | AGGATTGAGTTGGGAGCCAA+TGG | + | chr2.3:64515534-64515553 | MS.gene00770:CDS | 50.0% |
ACCAGAGAAGAGCTTGGCAG+AGG | + | chr2.3:64516039-64516058 | MS.gene00770:CDS | 55.0% | |
AGCGCATTCTTCCAGATGGG+AGG | + | chr2.3:64515290-64515309 | MS.gene00770:CDS | 55.0% | |
TCCTCTGCCAAGCTCTTCTC+TGG | - | chr2.3:64516043-64516062 | None:intergenic | 55.0% | |
TGGTTGTGGTGGCTGTGTGA+TGG | + | chr2.3:64515261-64515280 | MS.gene00770:CDS | 55.0% | |
! | GAGTATTGCGATCCTCGAGC+TGG | + | chr2.3:64515937-64515956 | MS.gene00770:CDS | 55.0% |
!! | ACTTGGTGAGGGCATCCAGC+AGG | - | chr2.3:64516785-64516804 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.3 | gene | 64513583 | 64517245 | 64513583 | ID=MS.gene00770 |
chr2.3 | mRNA | 64513583 | 64517245 | 64513583 | ID=MS.gene00770.t1;Parent=MS.gene00770 |
chr2.3 | exon | 64513583 | 64513966 | 64513583 | ID=MS.gene00770.t1.exon1;Parent=MS.gene00770.t1 |
chr2.3 | CDS | 64513583 | 64513966 | 64513583 | ID=cds.MS.gene00770.t1;Parent=MS.gene00770.t1 |
chr2.3 | exon | 64514065 | 64514177 | 64514065 | ID=MS.gene00770.t1.exon2;Parent=MS.gene00770.t1 |
chr2.3 | CDS | 64514065 | 64514177 | 64514065 | ID=cds.MS.gene00770.t1;Parent=MS.gene00770.t1 |
chr2.3 | exon | 64514295 | 64514394 | 64514295 | ID=MS.gene00770.t1.exon3;Parent=MS.gene00770.t1 |
chr2.3 | CDS | 64514295 | 64514394 | 64514295 | ID=cds.MS.gene00770.t1;Parent=MS.gene00770.t1 |
chr2.3 | exon | 64514495 | 64514627 | 64514495 | ID=MS.gene00770.t1.exon4;Parent=MS.gene00770.t1 |
chr2.3 | CDS | 64514495 | 64514627 | 64514495 | ID=cds.MS.gene00770.t1;Parent=MS.gene00770.t1 |
chr2.3 | exon | 64514715 | 64514778 | 64514715 | ID=MS.gene00770.t1.exon5;Parent=MS.gene00770.t1 |
chr2.3 | CDS | 64514715 | 64514778 | 64514715 | ID=cds.MS.gene00770.t1;Parent=MS.gene00770.t1 |
chr2.3 | exon | 64514982 | 64515651 | 64514982 | ID=MS.gene00770.t1.exon6;Parent=MS.gene00770.t1 |
chr2.3 | CDS | 64514982 | 64515651 | 64514982 | ID=cds.MS.gene00770.t1;Parent=MS.gene00770.t1 |
chr2.3 | exon | 64515772 | 64516101 | 64515772 | ID=MS.gene00770.t1.exon7;Parent=MS.gene00770.t1 |
chr2.3 | CDS | 64515772 | 64516101 | 64515772 | ID=cds.MS.gene00770.t1;Parent=MS.gene00770.t1 |
chr2.3 | exon | 64516213 | 64516488 | 64516213 | ID=MS.gene00770.t1.exon8;Parent=MS.gene00770.t1 |
chr2.3 | CDS | 64516213 | 64516488 | 64516213 | ID=cds.MS.gene00770.t1;Parent=MS.gene00770.t1 |
chr2.3 | exon | 64516573 | 64516645 | 64516573 | ID=MS.gene00770.t1.exon9;Parent=MS.gene00770.t1 |
chr2.3 | CDS | 64516573 | 64516645 | 64516573 | ID=cds.MS.gene00770.t1;Parent=MS.gene00770.t1 |
chr2.3 | exon | 64516732 | 64516817 | 64516732 | ID=MS.gene00770.t1.exon10;Parent=MS.gene00770.t1 |
chr2.3 | CDS | 64516732 | 64516817 | 64516732 | ID=cds.MS.gene00770.t1;Parent=MS.gene00770.t1 |
chr2.3 | exon | 64516934 | 64517053 | 64516934 | ID=MS.gene00770.t1.exon11;Parent=MS.gene00770.t1 |
chr2.3 | CDS | 64516934 | 64517053 | 64516934 | ID=cds.MS.gene00770.t1;Parent=MS.gene00770.t1 |
chr2.3 | exon | 64517165 | 64517245 | 64517165 | ID=MS.gene00770.t1.exon12;Parent=MS.gene00770.t1 |
chr2.3 | CDS | 64517165 | 64517245 | 64517165 | ID=cds.MS.gene00770.t1;Parent=MS.gene00770.t1 |
Gene Sequence |
Protein sequence |