Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene00777.t1 | XP_004486316.1 | 79.4 | 598 | 99 | 6 | 49 | 623 | 244 | 840 | 6.10E-278 | 966.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene00777.t1 | Q9SSE9 | 42.7 | 641 | 276 | 11 | 50 | 613 | 264 | 890 | 1.7e-135 | 484.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene00777.t1 | A0A1S2XAI5 | 79.4 | 598 | 99 | 6 | 49 | 623 | 244 | 840 | 4.4e-278 | 966.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene00777.t1 | TR | Jumonji |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene00777.t1 | MTR_2g024270 | 72.318 | 578 | 146 | 5 | 49 | 623 | 260 | 826 | 0.0 | 858 |
MS.gene00777.t1 | MTR_2g024140 | 72.028 | 572 | 134 | 4 | 49 | 617 | 140 | 688 | 0.0 | 810 |
MS.gene00777.t1 | MTR_4g132540 | 66.393 | 610 | 154 | 10 | 49 | 620 | 274 | 870 | 0.0 | 788 |
MS.gene00777.t1 | MTR_1g069565 | 48.019 | 631 | 259 | 13 | 49 | 614 | 253 | 879 | 0.0 | 539 |
MS.gene00777.t1 | MTR_1g114150 | 49.254 | 603 | 263 | 12 | 49 | 614 | 452 | 1048 | 5.94e-178 | 533 |
MS.gene00777.t1 | MTR_5g065200 | 49.833 | 598 | 253 | 17 | 49 | 614 | 250 | 832 | 8.00e-168 | 500 |
MS.gene00777.t1 | MTR_1g114130 | 47.769 | 605 | 273 | 13 | 49 | 614 | 436 | 1036 | 1.83e-166 | 504 |
MS.gene00777.t1 | MTR_5g047620 | 44.427 | 646 | 298 | 16 | 22 | 614 | 158 | 795 | 2.22e-164 | 491 |
MS.gene00777.t1 | MTR_1g069565 | 42.587 | 688 | 269 | 15 | 49 | 614 | 253 | 936 | 2.61e-161 | 486 |
MS.gene00777.t1 | MTR_1g114070 | 46.745 | 599 | 276 | 11 | 49 | 614 | 334 | 922 | 1.96e-160 | 485 |
MS.gene00777.t1 | MTR_2g024240 | 71.724 | 290 | 67 | 3 | 292 | 579 | 112 | 388 | 1.21e-138 | 410 |
MS.gene00777.t1 | MTR_2g024240 | 69.000 | 100 | 29 | 2 | 111 | 209 | 1 | 99 | 1.33e-37 | 144 |
MS.gene00777.t1 | MTR_0020s0100 | 43.220 | 590 | 268 | 18 | 50 | 599 | 129 | 691 | 1.03e-135 | 414 |
MS.gene00777.t1 | MTR_1g083120 | 34.127 | 630 | 308 | 11 | 54 | 617 | 306 | 894 | 1.10e-118 | 375 |
MS.gene00777.t1 | MTR_1g114150 | 44.130 | 494 | 235 | 11 | 49 | 507 | 452 | 939 | 1.14e-118 | 375 |
MS.gene00777.t1 | MTR_1g083120 | 34.127 | 630 | 308 | 11 | 54 | 617 | 323 | 911 | 1.61e-118 | 375 |
MS.gene00777.t1 | MTR_1g083120 | 33.860 | 570 | 270 | 11 | 54 | 557 | 306 | 834 | 1.12e-102 | 331 |
MS.gene00777.t1 | MTR_1g083120 | 33.860 | 570 | 270 | 11 | 54 | 557 | 306 | 834 | 1.56e-102 | 330 |
MS.gene00777.t1 | MTR_7g117445 | 40.888 | 428 | 207 | 10 | 49 | 436 | 245 | 666 | 1.21e-100 | 326 |
MS.gene00777.t1 | MTR_7g117445 | 66.304 | 92 | 29 | 1 | 466 | 555 | 774 | 865 | 5.59e-31 | 129 |
MS.gene00777.t1 | MTR_7g117445 | 40.888 | 428 | 207 | 10 | 49 | 436 | 245 | 666 | 2.12e-100 | 327 |
MS.gene00777.t1 | MTR_7g117445 | 63.399 | 153 | 54 | 1 | 466 | 616 | 774 | 926 | 3.27e-55 | 202 |
MS.gene00777.t1 | MTR_7g117445 | 40.888 | 428 | 207 | 10 | 49 | 436 | 245 | 666 | 3.11e-100 | 326 |
MS.gene00777.t1 | MTR_7g117445 | 63.399 | 153 | 54 | 1 | 466 | 616 | 774 | 926 | 3.43e-55 | 202 |
MS.gene00777.t1 | MTR_7g117445 | 40.888 | 428 | 207 | 10 | 49 | 436 | 245 | 666 | 3.46e-100 | 327 |
MS.gene00777.t1 | MTR_7g117445 | 63.399 | 153 | 54 | 1 | 466 | 616 | 774 | 926 | 3.93e-55 | 202 |
MS.gene00777.t1 | MTR_1g008060 | 43.284 | 402 | 185 | 8 | 57 | 439 | 986 | 1363 | 2.27e-91 | 310 |
MS.gene00777.t1 | MTR_1g008060 | 60.843 | 166 | 60 | 2 | 454 | 617 | 1536 | 1698 | 7.91e-54 | 199 |
MS.gene00777.t1 | MTR_1g008060 | 43.284 | 402 | 185 | 8 | 57 | 439 | 977 | 1354 | 2.65e-91 | 310 |
MS.gene00777.t1 | MTR_1g008060 | 60.843 | 166 | 60 | 2 | 454 | 617 | 1527 | 1689 | 8.50e-54 | 199 |
MS.gene00777.t1 | MTR_2g011630 | 31.951 | 651 | 350 | 17 | 49 | 616 | 72 | 712 | 1.45e-85 | 282 |
MS.gene00777.t1 | MTR_2g011630 | 31.951 | 651 | 350 | 17 | 49 | 616 | 104 | 744 | 2.13e-85 | 283 |
MS.gene00777.t1 | MTR_8g465700 | 69.399 | 183 | 50 | 2 | 224 | 406 | 1 | 177 | 2.48e-85 | 268 |
MS.gene00777.t1 | MTR_2g011630 | 31.951 | 651 | 350 | 17 | 49 | 616 | 316 | 956 | 3.19e-83 | 281 |
MS.gene00777.t1 | MTR_8g465720 | 57.447 | 188 | 36 | 4 | 438 | 622 | 18 | 164 | 2.37e-60 | 199 |
MS.gene00777.t1 | MTR_4g091520 | 35.831 | 307 | 172 | 4 | 147 | 434 | 648 | 948 | 5.31e-49 | 184 |
MS.gene00777.t1 | MTR_4g091520 | 31.677 | 161 | 95 | 4 | 27 | 179 | 353 | 506 | 1.06e-13 | 75.1 |
MS.gene00777.t1 | MTR_4g091520 | 35.831 | 307 | 172 | 4 | 147 | 434 | 683 | 983 | 5.78e-49 | 184 |
MS.gene00777.t1 | MTR_4g091520 | 31.677 | 161 | 95 | 4 | 27 | 179 | 353 | 506 | 9.76e-14 | 75.1 |
MS.gene00777.t1 | MTR_4g091520 | 35.831 | 307 | 172 | 4 | 147 | 434 | 718 | 1018 | 7.18e-49 | 184 |
MS.gene00777.t1 | MTR_4g091520 | 31.677 | 161 | 95 | 4 | 27 | 179 | 353 | 506 | 1.19e-13 | 75.1 |
MS.gene00777.t1 | MTR_4g091520 | 35.831 | 307 | 172 | 4 | 147 | 434 | 718 | 1018 | 9.81e-49 | 184 |
MS.gene00777.t1 | MTR_4g091520 | 47.403 | 154 | 78 | 2 | 465 | 616 | 1126 | 1278 | 2.67e-36 | 146 |
MS.gene00777.t1 | MTR_4g091520 | 31.677 | 161 | 95 | 4 | 27 | 179 | 353 | 506 | 1.10e-13 | 75.1 |
MS.gene00777.t1 | MTR_0295s0020 | 47.929 | 169 | 81 | 1 | 285 | 446 | 12 | 180 | 1.23e-43 | 154 |
MS.gene00777.t1 | MTR_8g013920 | 43.396 | 159 | 73 | 5 | 319 | 475 | 40 | 183 | 6.63e-28 | 111 |
MS.gene00777.t1 | MTR_8g062940 | 34.052 | 232 | 124 | 6 | 49 | 269 | 142 | 355 | 1.22e-27 | 115 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene00777.t1 | AT1G11950 | 56.291 | 604 | 240 | 11 | 27 | 617 | 279 | 871 | 0.0 | 682 |
MS.gene00777.t1 | AT1G11950 | 56.291 | 604 | 240 | 11 | 27 | 617 | 279 | 871 | 0.0 | 682 |
MS.gene00777.t1 | AT1G62310 | 57.679 | 586 | 230 | 8 | 27 | 597 | 295 | 877 | 0.0 | 671 |
MS.gene00777.t1 | AT1G11950 | 54.120 | 534 | 221 | 11 | 27 | 547 | 279 | 801 | 0.0 | 573 |
MS.gene00777.t1 | AT4G00990 | 40.451 | 665 | 301 | 14 | 42 | 620 | 180 | 835 | 2.39e-150 | 455 |
MS.gene00777.t1 | AT3G07610 | 42.265 | 627 | 271 | 14 | 64 | 613 | 278 | 890 | 2.17e-141 | 437 |
MS.gene00777.t1 | AT3G07610 | 40.402 | 646 | 278 | 15 | 64 | 613 | 278 | 912 | 5.55e-133 | 416 |
MS.gene00777.t1 | AT4G00990 | 38.980 | 608 | 276 | 14 | 42 | 563 | 180 | 778 | 1.44e-125 | 389 |
MS.gene00777.t1 | AT4G00990 | 39.333 | 600 | 269 | 14 | 42 | 555 | 180 | 770 | 1.35e-124 | 386 |
MS.gene00777.t1 | AT1G09060 | 32.773 | 595 | 329 | 14 | 66 | 617 | 327 | 893 | 7.22e-92 | 304 |
MS.gene00777.t1 | AT1G09060 | 32.773 | 595 | 329 | 14 | 66 | 617 | 327 | 893 | 7.22e-92 | 304 |
MS.gene00777.t1 | AT1G09060 | 32.773 | 595 | 329 | 14 | 66 | 617 | 341 | 907 | 7.72e-92 | 304 |
MS.gene00777.t1 | AT1G09060 | 32.773 | 595 | 329 | 14 | 66 | 617 | 341 | 907 | 7.72e-92 | 304 |
MS.gene00777.t1 | AT4G21430 | 33.636 | 440 | 250 | 10 | 218 | 623 | 490 | 921 | 1.36e-66 | 234 |
MS.gene00777.t1 | AT3G07610 | 42.509 | 287 | 136 | 6 | 141 | 407 | 410 | 687 | 3.13e-62 | 220 |
MS.gene00777.t1 | AT3G07610 | 55.556 | 63 | 27 | 1 | 64 | 125 | 278 | 340 | 5.34e-15 | 79.0 |
Find 110 sgRNAs with CRISPR-Local
Find 199 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GTCAGAAATTGTACTGTTTA+AGG | 0.120131 | 2.3:+64561085 | MS.gene00777:CDS |
CCACAACCTCCAAGTTCTTT+TGG | 0.207866 | 2.3:-64562286 | None:intergenic |
AGAACATCACGAACTATAAT+TGG | 0.208434 | 2.3:-64562541 | None:intergenic |
CTGTTATTAGAAAATTAAAA+AGG | 0.230359 | 2.3:+64563563 | MS.gene00777:CDS |
AATATCTTCGATTGACATAT+TGG | 0.240741 | 2.3:-64561235 | None:intergenic |
AAAAGTATGCCTAAATTCTT+TGG | 0.242870 | 2.3:-64563773 | None:intergenic |
GAGAGCATTGTGCGCAAATT+TGG | 0.252466 | 2.3:+64562606 | MS.gene00777:CDS |
CAGAAACTGGTGGTGCTCTT+TGG | 0.271763 | 2.3:+64563695 | MS.gene00777:CDS |
ACATGTCATAAAGCCTGATT+TGG | 0.301815 | 2.3:+64563294 | MS.gene00777:CDS |
ATAGACCCCTTGGAGATTAA+TGG | 0.305271 | 2.3:+64563631 | MS.gene00777:CDS |
TTGTGGCTGTGGTTGTGTTA+TGG | 0.319953 | 2.3:+64562303 | MS.gene00777:CDS |
TTGTGCGCAAATTTGGCTTC+AGG | 0.324597 | 2.3:+64562613 | MS.gene00777:CDS |
AGAAACTGGTGGTGCTCTTT+GGG | 0.329119 | 2.3:+64563696 | MS.gene00777:CDS |
ATATCTTCGATTGACATATT+GGG | 0.336054 | 2.3:-64561234 | None:intergenic |
GGAAACACTCCAAAGAATTT+AGG | 0.337467 | 2.3:+64563764 | MS.gene00777:CDS |
CACAAAACTTCACTGTGATA+TGG | 0.367632 | 2.3:+64563375 | MS.gene00777:CDS |
CTTCATGATATACTGAGCTT+TGG | 0.368964 | 2.3:-64562371 | None:intergenic |
TGAGCTTTGGTTATCAAATC+AGG | 0.370740 | 2.3:-64562358 | None:intergenic |
AAATCAGGTATTCTCCCATT+TGG | 0.376107 | 2.3:-64562343 | None:intergenic |
ATTGCAATTCTTACAACAAA+AGG | 0.390679 | 2.3:-64561271 | None:intergenic |
ATCACTATTAGCATTCCATT+TGG | 0.401903 | 2.3:-64562245 | None:intergenic |
TAATACAGTACCTGTTCAAC+TGG | 0.426256 | 2.3:-64563802 | None:intergenic |
AGGTTTGAGTTGGGAGCCTA+TGG | 0.429318 | 2.3:+64562576 | MS.gene00777:CDS |
CTGAAACGCATGCTTCCAAA+TGG | 0.431339 | 2.3:+64562328 | MS.gene00777:CDS |
CTTCTAATTCTTGTACAGCT+TGG | 0.439855 | 2.3:-64564536 | None:intergenic |
TCATCAAAGCATAGAGTTTG+AGG | 0.443536 | 2.3:-64561830 | None:intergenic |
GTTGGGAGCCTATGGTTACT+TGG | 0.443800 | 2.3:+64562584 | MS.gene00777:CDS |
GTTTCGCTACACTCTTGAAA+TGG | 0.449831 | 2.3:-64563232 | None:intergenic |
TGACCTTGAGATTTCTGACT+TGG | 0.453559 | 2.3:-64564125 | None:intergenic |
TTGAAGGTGTCGAAACTCTT+CGG | 0.459153 | 2.3:-64564330 | None:intergenic |
CAAATTCTTCAAAGGTTACA+AGG | 0.462776 | 2.3:+64563093 | MS.gene00777:CDS |
TGCTCAAAAGAAACAGAAAC+TGG | 0.463190 | 2.3:+64563682 | MS.gene00777:CDS |
TGGACATTTGAGCAGAAACT+TGG | 0.466489 | 2.3:+64564069 | MS.gene00777:CDS |
CAGATTTCAAATGAACACTT+TGG | 0.469253 | 2.3:-64562064 | None:intergenic |
AACAAGGGACAGGTTTGAGT+TGG | 0.470587 | 2.3:+64562566 | MS.gene00777:CDS |
GCAACTTTGCAGCAAGGTTG+AGG | 0.472874 | 2.3:-64563267 | None:intergenic |
ACAAGGGACAGGTTTGAGTT+GGG | 0.475477 | 2.3:+64562567 | MS.gene00777:CDS |
CCAAAAGAACTTGGAGGTTG+TGG | 0.477429 | 2.3:+64562286 | MS.gene00777:CDS |
GTATCAAAATTTGTTGGTAG+AGG | 0.479805 | 2.3:-64562190 | None:intergenic |
TTGAATTTCGAAAGCATTGG+AGG | 0.493283 | 2.3:+64562509 | MS.gene00777:CDS |
TTTCGAAAGCATTGGAGGAA+TGG | 0.494705 | 2.3:+64562514 | MS.gene00777:CDS |
AGTAAAAGCCATCGATTGCT+TGG | 0.495169 | 2.3:+64562660 | MS.gene00777:CDS |
TTGATGATGAGCGCATCTAT+TGG | 0.496776 | 2.3:+64561846 | MS.gene00777:CDS |
TTGCAATTCTTACAACAAAA+GGG | 0.499542 | 2.3:-64561270 | None:intergenic |
CAAATTTCCATTAATCTCCA+AGG | 0.503218 | 2.3:-64563638 | None:intergenic |
GAACTTGGAGGTTGTGGCTG+TGG | 0.508394 | 2.3:+64562292 | MS.gene00777:CDS |
GATGTTCTTAAACAAGGGAC+AGG | 0.511480 | 2.3:+64562556 | MS.gene00777:CDS |
AACACTCGCAAATTCTTCAA+AGG | 0.513485 | 2.3:+64563085 | MS.gene00777:CDS |
ATGTTGAGACATTCACCAAA+TGG | 0.520138 | 2.3:+64562230 | MS.gene00777:CDS |
TTTCATTAGATGCTCATCAC+TGG | 0.524868 | 2.3:+64564560 | MS.gene00777:CDS |
AAGTTTCTGCTCAAATGTCC+AGG | 0.526250 | 2.3:-64564067 | None:intergenic |
GTATTTCTTTGCAACAACTT+AGG | 0.527077 | 2.3:-64562087 | None:intergenic |
AGATGCTCAAGCTAAAAGAT+TGG | 0.532972 | 2.3:+64563146 | MS.gene00777:CDS |
TATCTTCGATTGACATATTG+GGG | 0.534911 | 2.3:-64561233 | None:intergenic |
CATGTCATAAAGCCTGATTT+GGG | 0.535555 | 2.3:+64563295 | MS.gene00777:CDS |
ATCAAAGAAGAACTTGGAAG+AGG | 0.537226 | 2.3:+64563343 | MS.gene00777:CDS |
AATGTTTGCTTATGTTCAAG+AGG | 0.537390 | 2.3:+64561305 | MS.gene00777:CDS |
ATGTTCAAGAGGAATTATCA+AGG | 0.540569 | 2.3:+64561316 | MS.gene00777:CDS |
AAATTTCCATTAATCTCCAA+GGG | 0.542541 | 2.3:-64563637 | None:intergenic |
TTTGATACAAACAATTCAGA+GGG | 0.542912 | 2.3:+64562205 | MS.gene00777:CDS |
TATGGAATCAAAGAAGAACT+TGG | 0.544627 | 2.3:+64563337 | MS.gene00777:CDS |
TTGAGATTTCTGACTTGGTG+TGG | 0.545685 | 2.3:-64564120 | None:intergenic |
GAAGCAGTATTTATTCCTGC+TGG | 0.549657 | 2.3:+64564093 | MS.gene00777:CDS |
AAATCAGGCTTTATGACATG+TGG | 0.556215 | 2.3:-64563292 | None:intergenic |
TTCGTGATGTTCTTAAACAA+GGG | 0.556466 | 2.3:+64562551 | MS.gene00777:CDS |
CGATTGCTTGGCTAGTTGTG+AGG | 0.557110 | 2.3:+64562672 | MS.gene00777:CDS |
AAATGGAATGCTAATAGTGA+TGG | 0.557384 | 2.3:+64562247 | MS.gene00777:CDS |
TCAAGATAATATAGACCCCT+TGG | 0.558942 | 2.3:+64563621 | MS.gene00777:CDS |
TTCTTCAAAGGTTACAAGGA+GGG | 0.559654 | 2.3:+64563097 | MS.gene00777:CDS |
GTTCGTGATGTTCTTAAACA+AGG | 0.566626 | 2.3:+64562550 | MS.gene00777:CDS |
TGAGCATAAGAAGAAGCTAA+AGG | 0.568843 | 2.3:+64563942 | MS.gene00777:CDS |
TTTATAAGGTCACTTGACAA+TGG | 0.570123 | 2.3:-64562475 | None:intergenic |
ACTTGGTGTGGACATCCAGC+AGG | 0.572126 | 2.3:-64564108 | None:intergenic |
GAATGTGCTCCAAAAGAACT+TGG | 0.573014 | 2.3:+64562277 | MS.gene00777:CDS |
TAAGGTCACTTGACAATGGA+CGG | 0.574775 | 2.3:-64562471 | None:intergenic |
GAGTGTAGCGAAACTCGAGC+TGG | 0.576688 | 2.3:+64563241 | MS.gene00777:CDS |
TGAAACGCATGCTTCCAAAT+GGG | 0.579984 | 2.3:+64562329 | MS.gene00777:CDS |
AGAGGTTATGATTACATGCA+TGG | 0.580101 | 2.3:+64562160 | MS.gene00777:CDS |
TCAATTACAGGTGTAGAACC+TGG | 0.581857 | 2.3:+64564049 | MS.gene00777:intron |
AATCAGGCTTTATGACATGT+GGG | 0.582306 | 2.3:-64563291 | None:intergenic |
AACATTGGTCATGAATAGGA+TGG | 0.583998 | 2.3:-64563906 | None:intergenic |
TGAAACTTCATTTCAGAGCG+TGG | 0.589382 | 2.3:-64562127 | None:intergenic |
TTGTTTGTATCAAAATTTGT+TGG | 0.593330 | 2.3:-64562196 | None:intergenic |
TATTTGAATTTCGAAAGCAT+TGG | 0.595321 | 2.3:+64562506 | MS.gene00777:CDS |
GGGCACATAAGGCTCAAGAT+CGG | 0.601082 | 2.3:+64563584 | MS.gene00777:CDS |
AGATCTTCAAACTTGTCAGA+AGG | 0.605347 | 2.3:-64563172 | None:intergenic |
TAAGGCTCAAGATCGGAAAG+AGG | 0.605735 | 2.3:+64563591 | MS.gene00777:CDS |
AATGCTCTCCAAGTAACCAT+AGG | 0.613712 | 2.3:-64562592 | None:intergenic |
AAGGCTCAAGATCGGAAAGA+GGG | 0.615328 | 2.3:+64563592 | MS.gene00777:CDS |
ACAACTAGCCAAGCAATCGA+TGG | 0.616859 | 2.3:-64562668 | None:intergenic |
GTTTAAGGTGCATCAAACAA+TGG | 0.619517 | 2.3:+64561100 | MS.gene00777:CDS |
TGTTGCAAAGAAATACGCAA+TGG | 0.621957 | 2.3:+64562094 | MS.gene00777:CDS |
TCAGGCTTTATGACATGTGG+GGG | 0.630295 | 2.3:-64563289 | None:intergenic |
TCTTCAAACTTGTCAGAAGG+TGG | 0.634708 | 2.3:-64563169 | None:intergenic |
ATCAGGCTTTATGACATGTG+GGG | 0.635513 | 2.3:-64563290 | None:intergenic |
TGTGCTCCAAAAGAACTTGG+AGG | 0.649295 | 2.3:+64562280 | MS.gene00777:CDS |
ACACCAAGTCAGAAATCTCA+AGG | 0.651808 | 2.3:+64564122 | MS.gene00777:CDS |
ACTCTTGAAATGGCAAGCAA+CGG | 0.652429 | 2.3:-64563222 | None:intergenic |
TCACTGTGATATGGCAGATG+CGG | 0.655612 | 2.3:+64563384 | MS.gene00777:CDS |
ATTTGGTGAATGTCTCAACA+TGG | 0.656800 | 2.3:-64562228 | None:intergenic |
ATTCTTCAAAGGTTACAAGG+AGG | 0.679618 | 2.3:+64563096 | MS.gene00777:CDS |
AACGGATAAACTCATCACAA+TGG | 0.689117 | 2.3:-64563204 | None:intergenic |
ATCTTCGATTGACATATTGG+GGG | 0.707852 | 2.3:-64561232 | None:intergenic |
AATTTCCATTAATCTCCAAG+GGG | 0.708604 | 2.3:-64563636 | None:intergenic |
TCAAAAGAAACAGAAACTGG+TGG | 0.714549 | 2.3:+64563685 | MS.gene00777:CDS |
ACACCTTCAAAAGAATCACA+AGG | 0.716617 | 2.3:+64564343 | MS.gene00777:CDS |
ATAAACTCATCACAATGGCG+CGG | 0.720209 | 2.3:-64563199 | None:intergenic |
GGCAAGAGAAGACAAACTTG+AGG | 0.724823 | 2.3:+64564364 | MS.gene00777:CDS |
CAATCGAAGATATTGCAGAG+AGG | 0.739364 | 2.3:+64561244 | MS.gene00777:CDS |
GGTTATGATTACATGCATGG+TGG | 0.788197 | 2.3:+64562163 | MS.gene00777:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TGTTATTAGAAAATTAAAAA+GGG | + | chr2.3:64563564-64563583 | MS.gene00777:CDS | 10.0% |
!! | TTGAAAAAATAGAATAATTA+AGG | - | chr2.3:64561890-64561909 | None:intergenic | 10.0% |
!!! | AATTGATTGATATTTTTTAA+TGG | + | chr2.3:64564479-64564498 | MS.gene00777:intron | 10.0% |
!!! | ATAATTTACAAACATTTTTA+AGG | + | chr2.3:64561141-64561160 | MS.gene00777:intron | 10.0% |
!!! | TAATTTACAAACATTTTTAA+GGG | + | chr2.3:64561142-64561161 | MS.gene00777:intron | 10.0% |
!! | AAAAATTAGATGCATATTTA+AGG | + | chr2.3:64563743-64563762 | MS.gene00777:CDS | 15.0% |
!! | AACTTTATATGCATATATTT+GGG | + | chr2.3:64563024-64563043 | MS.gene00777:intron | 15.0% |
!! | CTGTTATTAGAAAATTAAAA+AGG | + | chr2.3:64563563-64563582 | MS.gene00777:CDS | 15.0% |
!! | GTAATAACTTGATTATATAT+TGG | - | chr2.3:64561634-64561653 | None:intergenic | 15.0% |
!! | TAACTTTATATGCATATATT+TGG | + | chr2.3:64563023-64563042 | MS.gene00777:intron | 15.0% |
!!! | AGTAAACTTCTTTTTATATA+TGG | + | chr2.3:64562731-64562750 | MS.gene00777:intron | 15.0% |
!!! | CTATTTTTTCAAATCATTAT+TGG | + | chr2.3:64561898-64561917 | MS.gene00777:intron | 15.0% |
!!! | TATTTTTCATTTTTGCATAT+AGG | + | chr2.3:64561207-64561226 | MS.gene00777:intron | 15.0% |
!!! | TTGAATTGTAAGTATAATTT+TGG | + | chr2.3:64561396-64561415 | MS.gene00777:intron | 15.0% |
!! | AAGTTTCAATACAAAAATAG+AGG | + | chr2.3:64562142-64562161 | MS.gene00777:CDS | 20.0% |
!! | ATAACTTGATTATATATTGG+TGG | - | chr2.3:64561631-64561650 | None:intergenic | 20.0% |
!! | CAATAGTCAAATAAAAACAT+TGG | - | chr2.3:64563924-64563943 | None:intergenic | 20.0% |
!! | GAAGAACATATAAAAATCTT+TGG | + | chr2.3:64563119-64563138 | MS.gene00777:CDS | 20.0% |
!! | GTAGAAAAAATACATGTATT+TGG | + | chr2.3:64564187-64564206 | MS.gene00777:intron | 20.0% |
!! | TAGAAACAATAAAGTAAATG+TGG | - | chr2.3:64563463-64563482 | None:intergenic | 20.0% |
!! | TTGTTTGTATCAAAATTTGT+TGG | - | chr2.3:64562199-64562218 | None:intergenic | 20.0% |
!!! | AAAAACACTTTTAAAGCATA+GGG | - | chr2.3:64562940-64562959 | None:intergenic | 20.0% |
!!! | AATTAGATTTTGAAGCTAAA+TGG | - | chr2.3:64562981-64563000 | None:intergenic | 20.0% |
!!! | CAAATAGCATTTCTTTTATA+AGG | - | chr2.3:64562492-64562511 | None:intergenic | 20.0% |
!!! | CTAAGTTGAATTAAAACTAA+CGG | - | chr2.3:64561536-64561555 | None:intergenic | 20.0% |
!!! | TACATTTAAAGTCATGTTTT+GGG | + | chr2.3:64562903-64562922 | MS.gene00777:intron | 20.0% |
!!! | TCAAAAATTTGTTGAACAAA+AGG | - | chr2.3:64561659-64561678 | None:intergenic | 20.0% |
!!! | TTTTGTTCAATAAATTTGAC+AGG | + | chr2.3:64563489-64563508 | MS.gene00777:intron | 20.0% |
! | AAATTTCCATTAATCTCCAA+GGG | - | chr2.3:64563640-64563659 | None:intergenic | 25.0% |
! | AACATATAAAAATCTTTGGC+CGG | + | chr2.3:64563123-64563142 | MS.gene00777:CDS | 25.0% |
! | AATATCTTCGATTGACATAT+TGG | - | chr2.3:64561238-64561257 | None:intergenic | 25.0% |
! | ATATCTTCGATTGACATATT+GGG | - | chr2.3:64561237-64561256 | None:intergenic | 25.0% |
! | ATTATGAATCACTCATAACA+CGG | - | chr2.3:64561959-64561978 | None:intergenic | 25.0% |
! | ATTGCAATTCTTACAACAAA+AGG | - | chr2.3:64561274-64561293 | None:intergenic | 25.0% |
! | CAAAAGAAAGAAAGACAAAA+AGG | - | chr2.3:64564417-64564436 | None:intergenic | 25.0% |
! | CATAAGAGAAACTAATCTAT+GGG | - | chr2.3:64561360-64561379 | None:intergenic | 25.0% |
! | CCAAAAACTTATATTGCTTA+TGG | + | chr2.3:64563319-64563338 | MS.gene00777:CDS | 25.0% |
! | GATACTACCTAAATAGTTAA+GGG | - | chr2.3:64561440-64561459 | None:intergenic | 25.0% |
! | TAAAAACATTGGTCATGAAT+AGG | - | chr2.3:64563913-64563932 | None:intergenic | 25.0% |
! | TCATAAGAGAAACTAATCTA+TGG | - | chr2.3:64561361-64561380 | None:intergenic | 25.0% |
! | TTGAATTAAAACTAACGGAA+AGG | - | chr2.3:64561531-64561550 | None:intergenic | 25.0% |
! | TTGCAATTCTTACAACAAAA+GGG | - | chr2.3:64561273-64561292 | None:intergenic | 25.0% |
! | TTTACATTCAGACATCTAAT+AGG | + | chr2.3:64561576-64561595 | MS.gene00777:intron | 25.0% |
! | TTTGATACAAACAATTCAGA+GGG | + | chr2.3:64562205-64562224 | MS.gene00777:CDS | 25.0% |
!! | AAAAGTATGCCTAAATTCTT+TGG | - | chr2.3:64563776-64563795 | None:intergenic | 25.0% |
!! | AAAATTAAAAAGGGCACATA+AGG | + | chr2.3:64563573-64563592 | MS.gene00777:CDS | 25.0% |
!! | AACTTCTTTGTTGGTTAATT+AGG | + | chr2.3:64563879-64563898 | MS.gene00777:intron | 25.0% |
!! | CCATAAGCAATATAAGTTTT+TGG | - | chr2.3:64563322-64563341 | None:intergenic | 25.0% |
!! | TATTTGAATTTCGAAAGCAT+TGG | + | chr2.3:64562506-64562525 | MS.gene00777:CDS | 25.0% |
!! | TTTTGAATTGTGTAAGTCTA+TGG | + | chr2.3:64562758-64562777 | MS.gene00777:intron | 25.0% |
!! | TTTTGATACAAACAATTCAG+AGG | + | chr2.3:64562204-64562223 | MS.gene00777:CDS | 25.0% |
!!! | GAAAAACACTTTTAAAGCAT+AGG | - | chr2.3:64562941-64562960 | None:intergenic | 25.0% |
!!! | GTACATTTAAAGTCATGTTT+TGG | + | chr2.3:64562902-64562921 | MS.gene00777:intron | 25.0% |
!!! | TATTTACGTTTTATTCCTTC+AGG | + | chr2.3:64562876-64562895 | MS.gene00777:intron | 25.0% |
!!! | TTTTGGCTAAATTGCATTTT+TGG | + | chr2.3:64561413-64561432 | MS.gene00777:intron | 25.0% |
AAATGGAATGCTAATAGTGA+TGG | + | chr2.3:64562247-64562266 | MS.gene00777:CDS | 30.0% | |
AAGTCTATGGCATATTAATG+AGG | + | chr2.3:64562771-64562790 | MS.gene00777:intron | 30.0% | |
AATGTTTGCTTATGTTCAAG+AGG | + | chr2.3:64561305-64561324 | MS.gene00777:CDS | 30.0% | |
AATTTCCATTAATCTCCAAG+GGG | - | chr2.3:64563639-64563658 | None:intergenic | 30.0% | |
AGAACATCACGAACTATAAT+TGG | - | chr2.3:64562544-64562563 | None:intergenic | 30.0% | |
ATCACTATTAGCATTCCATT+TGG | - | chr2.3:64562248-64562267 | None:intergenic | 30.0% | |
ATGTTCAAGAGGAATTATCA+AGG | + | chr2.3:64561316-64561335 | MS.gene00777:CDS | 30.0% | |
CAAATTCTTCAAAGGTTACA+AGG | + | chr2.3:64563093-64563112 | MS.gene00777:CDS | 30.0% | |
CAAATTTCCATTAATCTCCA+AGG | - | chr2.3:64563641-64563660 | None:intergenic | 30.0% | |
CAGATTTCAAATGAACACTT+TGG | - | chr2.3:64562067-64562086 | None:intergenic | 30.0% | |
CATGACTCTTAATCAATTAC+AGG | + | chr2.3:64564037-64564056 | MS.gene00777:intron | 30.0% | |
CGATACTACCTAAATAGTTA+AGG | - | chr2.3:64561441-64561460 | None:intergenic | 30.0% | |
GAGATTGAAGCTATAATACA+AGG | + | chr2.3:64561698-64561717 | MS.gene00777:intron | 30.0% | |
GTATTTCTTTGCAACAACTT+AGG | - | chr2.3:64562090-64562109 | None:intergenic | 30.0% | |
GTCAGAAATTGTACTGTTTA+AGG | + | chr2.3:64561085-64561104 | MS.gene00777:CDS | 30.0% | |
TAACCAACAAAGAAGTTAGT+GGG | - | chr2.3:64563876-64563895 | None:intergenic | 30.0% | |
TATCTTCGATTGACATATTG+GGG | - | chr2.3:64561236-64561255 | None:intergenic | 30.0% | |
TATGGAATCAAAGAAGAACT+TGG | + | chr2.3:64563337-64563356 | MS.gene00777:CDS | 30.0% | |
TGGTTGAAAAGGATGAATAT+TGG | - | chr2.3:64563050-64563069 | None:intergenic | 30.0% | |
TTAACCAACAAAGAAGTTAG+TGG | - | chr2.3:64563877-64563896 | None:intergenic | 30.0% | |
TTCGTGATGTTCTTAAACAA+GGG | + | chr2.3:64562551-64562570 | MS.gene00777:CDS | 30.0% | |
TTTATAAGGTCACTTGACAA+TGG | - | chr2.3:64562478-64562497 | None:intergenic | 30.0% | |
! | CTAACAATAAACTTGATAGC+AGG | + | chr2.3:64561782-64561801 | MS.gene00777:intron | 30.0% |
! | TTTTGGTCCCTTAACTATTT+AGG | + | chr2.3:64561430-64561449 | MS.gene00777:intron | 30.0% |
!! | ATTTAAAGTCATGTTTTGGG+TGG | + | chr2.3:64562906-64562925 | MS.gene00777:intron | 30.0% |
!! | ATTTTCTGGTGAAACAAAGT+CGG | - | chr2.3:64564288-64564307 | None:intergenic | 30.0% |
!! | GTATCAAAATTTGTTGGTAG+AGG | - | chr2.3:64562193-64562212 | None:intergenic | 30.0% |
!! | TTGAATTCTTTGGCTCATTT+TGG | + | chr2.3:64562696-64562715 | MS.gene00777:intron | 30.0% |
!!! | ATTTTGACTCATACAACTGA+GGG | + | chr2.3:64563517-64563536 | MS.gene00777:CDS | 30.0% |
!!! | GTTTTTTTTAGCAAGTGAGT+CGG | - | chr2.3:64562823-64562842 | None:intergenic | 30.0% |
!!! | TATTTTGACTCATACAACTG+AGG | + | chr2.3:64563516-64563535 | MS.gene00777:CDS | 30.0% |
AAATCAGGTATTCTCCCATT+TGG | - | chr2.3:64562346-64562365 | None:intergenic | 35.0% | |
AACACTCGCAAATTCTTCAA+AGG | + | chr2.3:64563085-64563104 | MS.gene00777:CDS | 35.0% | |
AACATTGGTCATGAATAGGA+TGG | - | chr2.3:64563909-64563928 | None:intergenic | 35.0% | |
AACGGATAAACTCATCACAA+TGG | - | chr2.3:64563207-64563226 | None:intergenic | 35.0% | |
AAGAAGCTAAAGGAAGAGTT+TGG | + | chr2.3:64563952-64563971 | MS.gene00777:intron | 35.0% | |
ACACCTTCAAAAGAATCACA+AGG | + | chr2.3:64564343-64564362 | MS.gene00777:CDS | 35.0% | |
ACATGTCATAAAGCCTGATT+TGG | + | chr2.3:64563294-64563313 | MS.gene00777:CDS | 35.0% | |
ACTAATTGCATGATGCATTG+AGG | - | chr2.3:64564005-64564024 | None:intergenic | 35.0% | |
AGAGGTTATGATTACATGCA+TGG | + | chr2.3:64562160-64562179 | MS.gene00777:CDS | 35.0% | |
AGATCTTCAAACTTGTCAGA+AGG | - | chr2.3:64563175-64563194 | None:intergenic | 35.0% | |
AGATGCTCAAGCTAAAAGAT+TGG | + | chr2.3:64563146-64563165 | MS.gene00777:CDS | 35.0% | |
ATCAAAGAAGAACTTGGAAG+AGG | + | chr2.3:64563343-64563362 | MS.gene00777:CDS | 35.0% | |
ATCTTCGATTGACATATTGG+GGG | - | chr2.3:64561235-64561254 | None:intergenic | 35.0% | |
ATGTTGAGACATTCACCAAA+TGG | + | chr2.3:64562230-64562249 | MS.gene00777:CDS | 35.0% | |
ATTCTTCAAAGGTTACAAGG+AGG | + | chr2.3:64563096-64563115 | MS.gene00777:CDS | 35.0% | |
CAAGAGGAATTATCAAGGTT+TGG | + | chr2.3:64561321-64561340 | MS.gene00777:intron | 35.0% | |
CACAAAACTTCACTGTGATA+TGG | + | chr2.3:64563375-64563394 | MS.gene00777:CDS | 35.0% | |
CATGTCATAAAGCCTGATTT+GGG | + | chr2.3:64563295-64563314 | MS.gene00777:CDS | 35.0% | |
CTATTTAGGTAGTATCGCTT+TGG | + | chr2.3:64561444-64561463 | MS.gene00777:intron | 35.0% | |
CTTCATGATATACTGAGCTT+TGG | - | chr2.3:64562374-64562393 | None:intergenic | 35.0% | |
CTTCTAATTCTTGTACAGCT+TGG | - | chr2.3:64564539-64564558 | None:intergenic | 35.0% | |
GGAAACACTCCAAAGAATTT+AGG | + | chr2.3:64563764-64563783 | MS.gene00777:CDS | 35.0% | |
GTGTAACAGAGAGAAGTTAA+GGG | - | chr2.3:64561500-64561519 | None:intergenic | 35.0% | |
GTGTTAATTTCTACCTGCAA+TGG | - | chr2.3:64563070-64563089 | None:intergenic | 35.0% | |
GTTCGTGATGTTCTTAAACA+AGG | + | chr2.3:64562550-64562569 | MS.gene00777:CDS | 35.0% | |
GTTGTGAGGTTTGAATTCTT+TGG | + | chr2.3:64562686-64562705 | MS.gene00777:intron | 35.0% | |
TAATACAGTACCTGTTCAAC+TGG | - | chr2.3:64563805-64563824 | None:intergenic | 35.0% | |
TAATGAGGCCTACAACAAAT+TGG | + | chr2.3:64562786-64562805 | MS.gene00777:intron | 35.0% | |
TCAAAAGAAACAGAAACTGG+TGG | + | chr2.3:64563685-64563704 | MS.gene00777:CDS | 35.0% | |
TCAAGATAATATAGACCCCT+TGG | + | chr2.3:64563621-64563640 | MS.gene00777:CDS | 35.0% | |
TCATCAAAGCATAGAGTTTG+AGG | - | chr2.3:64561833-64561852 | None:intergenic | 35.0% | |
TGAGCATAAGAAGAAGCTAA+AGG | + | chr2.3:64563942-64563961 | MS.gene00777:CDS | 35.0% | |
TGCTCAAAAGAAACAGAAAC+TGG | + | chr2.3:64563682-64563701 | MS.gene00777:CDS | 35.0% | |
TGTGTAACAGAGAGAAGTTA+AGG | - | chr2.3:64561501-64561520 | None:intergenic | 35.0% | |
TGTTGCAAAGAAATACGCAA+TGG | + | chr2.3:64562094-64562113 | MS.gene00777:CDS | 35.0% | |
TTCTTCAAAGGTTACAAGGA+GGG | + | chr2.3:64563097-64563116 | MS.gene00777:CDS | 35.0% | |
TTTCATTAGATGCTCATCAC+TGG | + | chr2.3:64564560-64564579 | MS.gene00777:CDS | 35.0% | |
! | AAATCAGGCTTTATGACATG+TGG | - | chr2.3:64563295-64563314 | None:intergenic | 35.0% |
! | AATCAGGCTTTATGACATGT+GGG | - | chr2.3:64563294-64563313 | None:intergenic | 35.0% |
! | ATGCAGATATGCACATTTTC+TGG | - | chr2.3:64564302-64564321 | None:intergenic | 35.0% |
! | ATTAGCTCTTTCACAATCTG+TGG | - | chr2.3:64561606-64561625 | None:intergenic | 35.0% |
! | ATTTGGTGAATGTCTCAACA+TGG | - | chr2.3:64562231-64562250 | None:intergenic | 35.0% |
! | CTTCTCTCTGTTACACATTT+TGG | + | chr2.3:64561504-64561523 | MS.gene00777:intron | 35.0% |
! | GTTTAAGGTGCATCAAACAA+TGG | + | chr2.3:64561100-64561119 | MS.gene00777:CDS | 35.0% |
! | TGAGCTTTGGTTATCAAATC+AGG | - | chr2.3:64562361-64562380 | None:intergenic | 35.0% |
! | TTGCCTTGTGATTCTTTTGA+AGG | - | chr2.3:64564349-64564368 | None:intergenic | 35.0% |
! | TTTTTGTTCTCCAGTTGAAC+AGG | + | chr2.3:64563792-64563811 | MS.gene00777:CDS | 35.0% |
!! | AAGTTCCTCCAATTTGTTGT+AGG | - | chr2.3:64562797-64562816 | None:intergenic | 35.0% |
!! | TAAGTTTTTGGACCCAAATC+AGG | - | chr2.3:64563310-64563329 | None:intergenic | 35.0% |
!! | TTGAATTTCGAAAGCATTGG+AGG | + | chr2.3:64562509-64562528 | MS.gene00777:CDS | 35.0% |
!! | TTTTGACTCATACAACTGAG+GGG | + | chr2.3:64563518-64563537 | MS.gene00777:CDS | 35.0% |
AAGTTTCTGCTCAAATGTCC+AGG | - | chr2.3:64564070-64564089 | None:intergenic | 40.0% | |
AATGCTCTCCAAGTAACCAT+AGG | - | chr2.3:64562595-64562614 | None:intergenic | 40.0% | |
ACACCAAGTCAGAAATCTCA+AGG | + | chr2.3:64564122-64564141 | MS.gene00777:CDS | 40.0% | |
ACTCTTGAAATGGCAAGCAA+CGG | - | chr2.3:64563225-64563244 | None:intergenic | 40.0% | |
AGTCCCACTAACTTCTTTGT+TGG | + | chr2.3:64563870-64563889 | MS.gene00777:intron | 40.0% | |
ATAAACTCATCACAATGGCG+CGG | - | chr2.3:64563202-64563221 | None:intergenic | 40.0% | |
ATAGACCCCTTGGAGATTAA+TGG | + | chr2.3:64563631-64563650 | MS.gene00777:CDS | 40.0% | |
CAATCGAAGATATTGCAGAG+AGG | + | chr2.3:64561244-64561263 | MS.gene00777:CDS | 40.0% | |
CTTTAAATGTACACGCCTGA+AGG | - | chr2.3:64562894-64562913 | None:intergenic | 40.0% | |
GAAGCAGTATTTATTCCTGC+TGG | + | chr2.3:64564093-64564112 | MS.gene00777:CDS | 40.0% | |
GAATGTGCTCCAAAAGAACT+TGG | + | chr2.3:64562277-64562296 | MS.gene00777:CDS | 40.0% | |
GATGTTCTTAAACAAGGGAC+AGG | + | chr2.3:64562556-64562575 | MS.gene00777:CDS | 40.0% | |
GGTTATGATTACATGCATGG+TGG | + | chr2.3:64562163-64562182 | MS.gene00777:CDS | 40.0% | |
GTTTCGCTACACTCTTGAAA+TGG | - | chr2.3:64563235-64563254 | None:intergenic | 40.0% | |
TAAGGTCACTTGACAATGGA+CGG | - | chr2.3:64562474-64562493 | None:intergenic | 40.0% | |
TCAATTACAGGTGTAGAACC+TGG | + | chr2.3:64564049-64564068 | MS.gene00777:intron | 40.0% | |
TCTACCTGCAATGGTTGAAA+AGG | - | chr2.3:64563061-64563080 | None:intergenic | 40.0% | |
TCTTCAAACTTGTCAGAAGG+TGG | - | chr2.3:64563172-64563191 | None:intergenic | 40.0% | |
TGAAACGCATGCTTCCAAAT+GGG | + | chr2.3:64562329-64562348 | MS.gene00777:CDS | 40.0% | |
TGAAACTTCATTTCAGAGCG+TGG | - | chr2.3:64562130-64562149 | None:intergenic | 40.0% | |
TGACCTTGAGATTTCTGACT+TGG | - | chr2.3:64564128-64564147 | None:intergenic | 40.0% | |
TGGACATTTGAGCAGAAACT+TGG | + | chr2.3:64564069-64564088 | MS.gene00777:CDS | 40.0% | |
! | AGTAAAAGCCATCGATTGCT+TGG | + | chr2.3:64562660-64562679 | MS.gene00777:CDS | 40.0% |
! | ATCAGGCTTTATGACATGTG+GGG | - | chr2.3:64563293-64563312 | None:intergenic | 40.0% |
! | TCATCCTTTTCAACCATTGC+AGG | + | chr2.3:64563054-64563073 | MS.gene00777:intron | 40.0% |
!! | CTGTTTCTTTTGAGCACACT+TGG | - | chr2.3:64563678-64563697 | None:intergenic | 40.0% |
!! | TTGAAGGTGTCGAAACTCTT+CGG | - | chr2.3:64564333-64564352 | None:intergenic | 40.0% |
!! | TTGAGATTTCTGACTTGGTG+TGG | - | chr2.3:64564123-64564142 | None:intergenic | 40.0% |
!! | TTGATGATGAGCGCATCTAT+TGG | + | chr2.3:64561846-64561865 | MS.gene00777:CDS | 40.0% |
!! | TTTCGAAAGCATTGGAGGAA+TGG | + | chr2.3:64562514-64562533 | MS.gene00777:CDS | 40.0% |
!!! | TCTTTTAGCTTGAGCATCTC+CGG | - | chr2.3:64563145-64563164 | None:intergenic | 40.0% |
AACAAGGGACAGGTTTGAGT+TGG | + | chr2.3:64562566-64562585 | MS.gene00777:CDS | 45.0% | |
AAGGCTCAAGATCGGAAAGA+GGG | + | chr2.3:64563592-64563611 | MS.gene00777:CDS | 45.0% | |
ACAACTAGCCAAGCAATCGA+TGG | - | chr2.3:64562671-64562690 | None:intergenic | 45.0% | |
CCAAAAGAACTTGGAGGTTG+TGG | + | chr2.3:64562286-64562305 | MS.gene00777:CDS | 45.0% | |
CTGAAACGCATGCTTCCAAA+TGG | + | chr2.3:64562328-64562347 | MS.gene00777:CDS | 45.0% | |
GGCAAGAGAAGACAAACTTG+AGG | + | chr2.3:64564364-64564383 | MS.gene00777:CDS | 45.0% | |
TAAGGCTCAAGATCGGAAAG+AGG | + | chr2.3:64563591-64563610 | MS.gene00777:CDS | 45.0% | |
TCACTGTGATATGGCAGATG+CGG | + | chr2.3:64563384-64563403 | MS.gene00777:CDS | 45.0% | |
TGAGGCCTACAACAAATTGG+AGG | + | chr2.3:64562789-64562808 | MS.gene00777:intron | 45.0% | |
TGTGCTCCAAAAGAACTTGG+AGG | + | chr2.3:64562280-64562299 | MS.gene00777:CDS | 45.0% | |
TTGTGGCTGTGGTTGTGTTA+TGG | + | chr2.3:64562303-64562322 | MS.gene00777:CDS | 45.0% | |
! | ACAAGGGACAGGTTTGAGTT+GGG | + | chr2.3:64562567-64562586 | MS.gene00777:CDS | 45.0% |
! | AGAAACTGGTGGTGCTCTTT+GGG | + | chr2.3:64563696-64563715 | MS.gene00777:CDS | 45.0% |
! | CCACAACCTCCAAGTTCTTT+TGG | - | chr2.3:64562289-64562308 | None:intergenic | 45.0% |
! | TCAGGCTTTATGACATGTGG+GGG | - | chr2.3:64563292-64563311 | None:intergenic | 45.0% |
! | TTGTGCGCAAATTTGGCTTC+AGG | + | chr2.3:64562613-64562632 | MS.gene00777:CDS | 45.0% |
!! | GAGAGCATTGTGCGCAAATT+TGG | + | chr2.3:64562606-64562625 | MS.gene00777:CDS | 45.0% |
!! | AAAAATATAATAAAATTAGA+TGG | - | chr2.3:64561559-64561578 | None:intergenic | 5.0% |
!!! | AATAAATCAAATTTTAATTA+AGG | - | chr2.3:64561472-64561491 | None:intergenic | 5.0% |
!!! | AATTAAAATTTGATTTATTT+TGG | + | chr2.3:64561473-64561492 | MS.gene00777:intron | 5.0% |
!!! | ATAAATCAAATTTTAATTAA+GGG | - | chr2.3:64561471-64561490 | None:intergenic | 5.0% |
GCAACTTTGCAGCAAGGTTG+AGG | - | chr2.3:64563270-64563289 | None:intergenic | 50.0% | |
GGGCACATAAGGCTCAAGAT+CGG | + | chr2.3:64563584-64563603 | MS.gene00777:CDS | 50.0% | |
GTTGGGAGCCTATGGTTACT+TGG | + | chr2.3:64562584-64562603 | MS.gene00777:CDS | 50.0% | |
! | CAGAAACTGGTGGTGCTCTT+TGG | + | chr2.3:64563695-64563714 | MS.gene00777:CDS | 50.0% |
! | CGATTGCTTGGCTAGTTGTG+AGG | + | chr2.3:64562672-64562691 | MS.gene00777:CDS | 50.0% |
!! | AGGTTTGAGTTGGGAGCCTA+TGG | + | chr2.3:64562576-64562595 | MS.gene00777:CDS | 50.0% |
GAACTTGGAGGTTGTGGCTG+TGG | + | chr2.3:64562292-64562311 | MS.gene00777:CDS | 55.0% | |
GAGTGTAGCGAAACTCGAGC+TGG | + | chr2.3:64563241-64563260 | MS.gene00777:CDS | 55.0% | |
!! | ACTTGGTGTGGACATCCAGC+AGG | - | chr2.3:64564111-64564130 | None:intergenic | 55.0% |
GTGGGGGCAACTTTGCAGCA+AGG | - | chr2.3:64563276-64563295 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.3 | gene | 64561083 | 64564587 | 64561083 | ID=MS.gene00777 |
chr2.3 | mRNA | 64561083 | 64564587 | 64561083 | ID=MS.gene00777.t1;Parent=MS.gene00777 |
chr2.3 | exon | 64561083 | 64561121 | 64561083 | ID=MS.gene00777.t1.exon1;Parent=MS.gene00777.t1 |
chr2.3 | CDS | 64561083 | 64561121 | 64561083 | ID=cds.MS.gene00777.t1;Parent=MS.gene00777.t1 |
chr2.3 | exon | 64561229 | 64561337 | 64561229 | ID=MS.gene00777.t1.exon2;Parent=MS.gene00777.t1 |
chr2.3 | CDS | 64561229 | 64561337 | 64561229 | ID=cds.MS.gene00777.t1;Parent=MS.gene00777.t1 |
chr2.3 | exon | 64561804 | 64561867 | 64561804 | ID=MS.gene00777.t1.exon3;Parent=MS.gene00777.t1 |
chr2.3 | CDS | 64561804 | 64561867 | 64561804 | ID=cds.MS.gene00777.t1;Parent=MS.gene00777.t1 |
chr2.3 | exon | 64562021 | 64562693 | 64562021 | ID=MS.gene00777.t1.exon4;Parent=MS.gene00777.t1 |
chr2.3 | CDS | 64562021 | 64562693 | 64562021 | ID=cds.MS.gene00777.t1;Parent=MS.gene00777.t1 |
chr2.3 | exon | 64563076 | 64563405 | 64563076 | ID=MS.gene00777.t1.exon5;Parent=MS.gene00777.t1 |
chr2.3 | CDS | 64563076 | 64563405 | 64563076 | ID=cds.MS.gene00777.t1;Parent=MS.gene00777.t1 |
chr2.3 | exon | 64563511 | 64563813 | 64563511 | ID=MS.gene00777.t1.exon6;Parent=MS.gene00777.t1 |
chr2.3 | CDS | 64563511 | 64563813 | 64563511 | ID=cds.MS.gene00777.t1;Parent=MS.gene00777.t1 |
chr2.3 | exon | 64563901 | 64563968 | 64563901 | ID=MS.gene00777.t1.exon7;Parent=MS.gene00777.t1 |
chr2.3 | CDS | 64563901 | 64563968 | 64563901 | ID=cds.MS.gene00777.t1;Parent=MS.gene00777.t1 |
chr2.3 | exon | 64564059 | 64564143 | 64564059 | ID=MS.gene00777.t1.exon8;Parent=MS.gene00777.t1 |
chr2.3 | CDS | 64564059 | 64564143 | 64564059 | ID=cds.MS.gene00777.t1;Parent=MS.gene00777.t1 |
chr2.3 | exon | 64564266 | 64564385 | 64564266 | ID=MS.gene00777.t1.exon9;Parent=MS.gene00777.t1 |
chr2.3 | CDS | 64564266 | 64564385 | 64564266 | ID=cds.MS.gene00777.t1;Parent=MS.gene00777.t1 |
chr2.3 | exon | 64564507 | 64564587 | 64564507 | ID=MS.gene00777.t1.exon10;Parent=MS.gene00777.t1 |
chr2.3 | CDS | 64564507 | 64564587 | 64564507 | ID=cds.MS.gene00777.t1;Parent=MS.gene00777.t1 |
Gene Sequence |
Protein sequence |