Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007820.t1 | KEH19503.1 | 96.8 | 711 | 22 | 1 | 1 | 710 | 1 | 711 | 0.00E+00 | 1400.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007820.t1 | Q56XZ1 | 49.1 | 695 | 301 | 11 | 17 | 710 | 21 | 663 | 5.4e-178 | 625.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007820.t1 | A0A072TRN9 | 96.8 | 711 | 22 | 1 | 1 | 710 | 1 | 711 | 0.0e+00 | 1400.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene007820.t1 | TF | STAT |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007820.t1 | MTR_8g461480 | 96.765 | 711 | 22 | 1 | 1 | 710 | 1 | 711 | 0.0 | 1420 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007820.t1 | AT1G78540 | 48.392 | 715 | 312 | 12 | 1 | 710 | 1 | 663 | 0.0 | 630 |
| MS.gene007820.t1 | AT1G78540 | 48.392 | 715 | 312 | 12 | 1 | 710 | 1 | 663 | 0.0 | 630 |
| MS.gene007820.t1 | AT1G17040 | 47.207 | 716 | 292 | 10 | 1 | 710 | 1 | 636 | 0.0 | 619 |
| MS.gene007820.t1 | AT1G17040 | 46.694 | 726 | 291 | 11 | 1 | 710 | 1 | 646 | 0.0 | 610 |
| MS.gene007820.t1 | AT1G78540 | 47.453 | 687 | 304 | 12 | 1 | 682 | 1 | 635 | 0.0 | 592 |
| MS.gene007820.t1 | AT1G17040 | 46.366 | 688 | 283 | 10 | 1 | 682 | 1 | 608 | 0.0 | 583 |
Find 177 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAACTTTCTCTTTCTGCTTT+TGG | 0.137670 | 8.1:+53761975 | MS.gene007820:CDS |
| AAAGGATAATCTCCTAATTT+TGG | 0.151104 | 8.1:-53767251 | None:intergenic |
| ATCTCTTGGAAATTAATATT+TGG | 0.178295 | 8.1:-53772469 | None:intergenic |
| TTCTACCCCAGATTGCTTTA+TGG | 0.181537 | 8.1:-53767516 | None:intergenic |
| TATCAAAGATCATCATTTAA+AGG | 0.184938 | 8.1:+53764576 | MS.gene007820:CDS |
| TATATTCGGCTTCACATTAA+TGG | 0.190807 | 8.1:+53764400 | MS.gene007820:CDS |
| ATGTGAAGCCGAATATAATT+TGG | 0.226222 | 8.1:-53764394 | None:intergenic |
| TTCCTTCAAATTACTTGAAT+TGG | 0.227549 | 8.1:-53764470 | None:intergenic |
| ATGAATCCTTCAATCCATTT+AGG | 0.246881 | 8.1:-53773428 | None:intergenic |
| ATTGGATTCCTTATGTAATA+AGG | 0.269045 | 8.1:-53764452 | None:intergenic |
| CAAGGAATGGGGTGGTTGTT+TGG | 0.283394 | 8.1:-53772530 | None:intergenic |
| CTTTCAATGGATCATATATA+CGG | 0.288269 | 8.1:+53773614 | MS.gene007820:CDS |
| GGAATTCCATGTCACCTAAA+TGG | 0.294593 | 8.1:+53773414 | MS.gene007820:CDS |
| TTCTTCTTCAACCTCAGATA+TGG | 0.297680 | 8.1:-53764772 | None:intergenic |
| ATATTCGGCTTCACATTAAT+GGG | 0.313116 | 8.1:+53764401 | MS.gene007820:CDS |
| ACAATTAGGCAACCGGCATC+TGG | 0.320701 | 8.1:-53773551 | None:intergenic |
| GATGGTGTTTGGGGCATTGT+TGG | 0.327498 | 8.1:+53764798 | MS.gene007820:CDS |
| AGGTTTGTCCAAATTATATT+CGG | 0.332939 | 8.1:+53764386 | MS.gene007820:intron |
| GTGGGGCCAGCTTCTTGAGG+TGG | 0.338393 | 8.1:-53773528 | None:intergenic |
| TAGAAGATGGAACTAATCTT+TGG | 0.341777 | 8.1:+53772495 | MS.gene007820:CDS |
| TGCCTAATTGTTACATATGT+TGG | 0.346266 | 8.1:+53773563 | MS.gene007820:CDS |
| TCATGTATGGACTGCTAATC+AGG | 0.353019 | 8.1:+53767550 | MS.gene007820:CDS |
| CTACTTTCCATGCTATTTGA+AGG | 0.360932 | 8.1:-53769771 | None:intergenic |
| CTGTTACTTGCATGGGTCCT+TGG | 0.362933 | 8.1:+53763617 | MS.gene007820:CDS |
| TCCCAACATATGTAACAATT+AGG | 0.370251 | 8.1:-53773565 | None:intergenic |
| TGCCAGACAGTATTTGAAAA+TGG | 0.371618 | 8.1:-53769817 | None:intergenic |
| CACATTAATGGGGAGATTGT+AGG | 0.372402 | 8.1:+53764412 | MS.gene007820:CDS |
| AGAAGAAAGTGATGGTGTTT+GGG | 0.375693 | 8.1:+53764788 | MS.gene007820:CDS |
| GCCTAATTGTTACATATGTT+GGG | 0.381610 | 8.1:+53773564 | MS.gene007820:CDS |
| AACCCCACCATAAAGCAATC+TGG | 0.385813 | 8.1:+53767509 | MS.gene007820:CDS |
| CAAGGACCCATGCAAGTAAC+AGG | 0.387372 | 8.1:-53763616 | None:intergenic |
| AAGAAGAAAGTGATGGTGTT+TGG | 0.389600 | 8.1:+53764787 | MS.gene007820:CDS |
| GGGACTGGGTAAATGCTATC+TGG | 0.392153 | 8.1:+53773393 | MS.gene007820:CDS |
| TCCATCTTCTATCAATCTCT+TGG | 0.394660 | 8.1:-53772483 | None:intergenic |
| CAAATACTGTCTGGCAGGCT+TGG | 0.395074 | 8.1:+53769824 | MS.gene007820:CDS |
| GAACCTGAGCTGTCCCGTTT+GGG | 0.400255 | 8.1:+53774524 | MS.gene007820:CDS |
| TCCAAGAGATTGATAGAAGA+TGG | 0.402990 | 8.1:+53772482 | MS.gene007820:CDS |
| TAGAGAACTTTGAGAAGTTA+TGG | 0.403203 | 8.1:+53773336 | MS.gene007820:CDS |
| TAATTTGAAGGAAATACATT+TGG | 0.404039 | 8.1:+53764480 | MS.gene007820:CDS |
| TAAACTGAATGATTTATGTT+TGG | 0.405855 | 8.1:+53761934 | MS.gene007820:CDS |
| AGAACCTGAGCTGTCCCGTT+TGG | 0.407753 | 8.1:+53774523 | MS.gene007820:CDS |
| AACGAGAAAAGGAGCACTTT+CGG | 0.410857 | 8.1:-53763536 | None:intergenic |
| TGGGGCCAGCTTCTTGAGGT+GGG | 0.411262 | 8.1:-53773527 | None:intergenic |
| ATTTGGACAGCCTGTTGATA+TGG | 0.412767 | 8.1:+53765360 | MS.gene007820:CDS |
| GAGATTCTAAGAAGCATTGC+GGG | 0.414323 | 8.1:+53773293 | MS.gene007820:CDS |
| TCGCCACAAACTACTTTCAA+TGG | 0.414819 | 8.1:+53773601 | MS.gene007820:CDS |
| AGATTGCTTTATGGTGGGGT+TGG | 0.415607 | 8.1:-53767507 | None:intergenic |
| CCCTACCACCATTCTTCATC+AGG | 0.420283 | 8.1:+53762024 | MS.gene007820:CDS |
| ACTGTCTTCCTTATTACATA+AGG | 0.420661 | 8.1:+53764444 | MS.gene007820:CDS |
| ACCTCATTCTCCATATCAAC+AGG | 0.425279 | 8.1:-53765370 | None:intergenic |
| AATGTAATAATTCTCATGTA+TGG | 0.426139 | 8.1:+53767537 | MS.gene007820:CDS |
| TCATGAAGATTGCTTCTTGT+GGG | 0.429431 | 8.1:+53772585 | MS.gene007820:CDS |
| CAAACAACCACCCCATTCCT+TGG | 0.429564 | 8.1:+53772531 | MS.gene007820:CDS |
| GTCCGATTCGATGCATCTCC+AGG | 0.430659 | 8.1:+53767291 | MS.gene007820:CDS |
| GTCAAGATCTCTCTCTCATC+AGG | 0.431837 | 8.1:+53772607 | MS.gene007820:CDS |
| ATATAAAATTAGGTTGAGAA+TGG | 0.431848 | 8.1:+53769654 | MS.gene007820:intron |
| ATACATTTGGCCAACCTTTG+TGG | 0.433609 | 8.1:+53764493 | MS.gene007820:CDS |
| TTCCATCATAGCTAGACAAA+AGG | 0.435470 | 8.1:-53765562 | None:intergenic |
| ACCCCAGATTGCTTTATGGT+GGG | 0.435953 | 8.1:-53767512 | None:intergenic |
| ACTGCGCTCTTCCAAGGAAT+GGG | 0.437559 | 8.1:-53772542 | None:intergenic |
| CAAGATATCTGTATCAGTTA+AGG | 0.438887 | 8.1:+53767484 | MS.gene007820:CDS |
| AGCAATTGATGATGTGTCAT+TGG | 0.443673 | 8.1:+53767394 | MS.gene007820:CDS |
| GGTGTTTGGGGCATTGTTGG+TGG | 0.445924 | 8.1:+53764801 | MS.gene007820:CDS |
| AGACAAAGAAATTTCAGAGT+TGG | 0.446109 | 8.1:+53769890 | MS.gene007820:CDS |
| TGAAGCTTCTGCCTCCTCCT+TGG | 0.447893 | 8.1:-53773453 | None:intergenic |
| TATAAAATTAGGTTGAGAAT+GGG | 0.447911 | 8.1:+53769655 | MS.gene007820:intron |
| CTGTAGCGTGTGTAATATCC+AGG | 0.453605 | 8.1:+53773372 | MS.gene007820:CDS |
| GAGGCAGAAGCTTCACTTCA+AGG | 0.453781 | 8.1:+53773461 | MS.gene007820:CDS |
| GGGGCCAGCTTCTTGAGGTG+GGG | 0.454316 | 8.1:-53773526 | None:intergenic |
| CCCCAGATTGCTTTATGGTG+GGG | 0.459838 | 8.1:-53767511 | None:intergenic |
| TCATTGGAAAGTATGAATTC+TGG | 0.460754 | 8.1:+53767410 | MS.gene007820:CDS |
| CTGGATATTACACACGCTAC+AGG | 0.462387 | 8.1:-53773371 | None:intergenic |
| ATCCAATTCAAGTAATTTGA+AGG | 0.462536 | 8.1:+53764468 | MS.gene007820:CDS |
| TGGAGACAGTAGTGGTGTGC+AGG | 0.464205 | 8.1:+53764513 | MS.gene007820:CDS |
| CACTGCGCTCTTCCAAGGAA+TGG | 0.469423 | 8.1:-53772543 | None:intergenic |
| TTGGAAGAGCGCAGTGTATG+AGG | 0.470136 | 8.1:+53772550 | MS.gene007820:CDS |
| ATATGTAACAATTAGGCAAC+CGG | 0.470781 | 8.1:-53773558 | None:intergenic |
| TCCATCATAGCTAGACAAAA+GGG | 0.472581 | 8.1:-53765561 | None:intergenic |
| AAGTAGAAGATATCAAATAT+CGG | 0.473248 | 8.1:+53769788 | MS.gene007820:CDS |
| TAGGCAACCGGCATCTGGGT+GGG | 0.474931 | 8.1:-53773546 | None:intergenic |
| AGCTGGCCCCACCCAGATGC+CGG | 0.477204 | 8.1:+53773539 | MS.gene007820:CDS |
| ATGTCACCTAAATGGATTGA+AGG | 0.477650 | 8.1:+53773422 | MS.gene007820:CDS |
| ACCCCACCATAAAGCAATCT+GGG | 0.481499 | 8.1:+53767510 | MS.gene007820:CDS |
| TATATCTTACCTTCCCAAAC+GGG | 0.481733 | 8.1:-53774537 | None:intergenic |
| TACCCCAGATTGCTTTATGG+TGG | 0.481887 | 8.1:-53767513 | None:intergenic |
| AAACCTCTTCATCAGTGGGT+TGG | 0.490109 | 8.1:-53767447 | None:intergenic |
| GCCTGTTGATATGGAGAATG+AGG | 0.491700 | 8.1:+53765369 | MS.gene007820:CDS |
| TTCACTTGTGTATGCTGACA+CGG | 0.492848 | 8.1:+53765502 | MS.gene007820:CDS |
| TCTTCATGTAAGTAAAGAAC+TGG | 0.493153 | 8.1:-53763589 | None:intergenic |
| TTCTTTGTCTGAAGCAGAGA+TGG | 0.494049 | 8.1:-53769877 | None:intergenic |
| GATCCATTGAAAGTAGTTTG+TGG | 0.495131 | 8.1:-53773604 | None:intergenic |
| ATATATCTTACCTTCCCAAA+CGG | 0.496846 | 8.1:-53774538 | None:intergenic |
| AGGCAACCGGCATCTGGGTG+GGG | 0.497592 | 8.1:-53773545 | None:intergenic |
| CGTGTGTAATATCCAGGGAC+TGG | 0.499294 | 8.1:+53773378 | MS.gene007820:CDS |
| TTCAATCCATTTAGGTGACA+TGG | 0.504658 | 8.1:-53773420 | None:intergenic |
| GAAGCTTCACTTCAAGGTCC+AGG | 0.505329 | 8.1:+53773467 | MS.gene007820:CDS |
| TTCATGAAGATTGCTTCTTG+TGG | 0.506672 | 8.1:+53772584 | MS.gene007820:CDS |
| TGGCACAGGCATCTTGTCGC+AGG | 0.510165 | 8.1:+53765305 | MS.gene007820:intron |
| CTTCCCAAACGGGACAGCTC+AGG | 0.511754 | 8.1:-53774527 | None:intergenic |
| TTATTGTTGATAACGAGAAA+AGG | 0.512110 | 8.1:-53763547 | None:intergenic |
| CTGAATCATCAGAGAGTACA+GGG | 0.512336 | 8.1:+53769736 | MS.gene007820:CDS |
| TGGGTGGGGCCAGCTTCTTG+AGG | 0.513111 | 8.1:-53773531 | None:intergenic |
| GAAGCTCCTGTTACTTGCAT+GGG | 0.514189 | 8.1:+53763610 | MS.gene007820:CDS |
| TCATCAGTTGTATTCTCGAC+TGG | 0.514337 | 8.1:-53765530 | None:intergenic |
| GTCGTGCATCATTTAAGCTC+AGG | 0.517134 | 8.1:+53765627 | MS.gene007820:CDS |
| GGTTCCCCACCTCAAGAAGC+TGG | 0.518481 | 8.1:+53773522 | MS.gene007820:CDS |
| AGATGGAACTAATCTTTGGC+TGG | 0.521756 | 8.1:+53772499 | MS.gene007820:CDS |
| ATTTAAGCTCAGGATATCTC+AGG | 0.523956 | 8.1:+53765637 | MS.gene007820:CDS |
| CAAAATTATCCACGCTGGTG+TGG | 0.527759 | 8.1:+53767324 | MS.gene007820:CDS |
| CCACGTTCTTGAAATCCTCC+TGG | 0.528277 | 8.1:-53773485 | None:intergenic |
| AAACCAACCCACTGATGAAG+AGG | 0.534477 | 8.1:+53767444 | MS.gene007820:CDS |
| TCATACACTGCGCTCTTCCA+AGG | 0.536339 | 8.1:-53772548 | None:intergenic |
| TTTCATCCAAGTGTGATAGC+AGG | 0.537892 | 8.1:+53767204 | MS.gene007820:CDS |
| TCTGAATCATCAGAGAGTAC+AGG | 0.539016 | 8.1:+53769735 | MS.gene007820:CDS |
| CAATTAGGCAACCGGCATCT+GGG | 0.539070 | 8.1:-53773550 | None:intergenic |
| GCCAGTAGCATATCTTGCAA+TGG | 0.540447 | 8.1:-53774500 | None:intergenic |
| ACCATTGCAAGATATGCTAC+TGG | 0.540687 | 8.1:+53774499 | MS.gene007820:CDS |
| CTCCTGGAGATGCATCGAAT+CGG | 0.542203 | 8.1:-53767293 | None:intergenic |
| ACTTTGAGAAGTTATGGTGC+TGG | 0.543644 | 8.1:+53773342 | MS.gene007820:CDS |
| CGGGTGTTTGTCTGAAGGAA+AGG | 0.544681 | 8.1:-53767269 | None:intergenic |
| AGAAGCTCCTGTTACTTGCA+TGG | 0.548585 | 8.1:+53763609 | MS.gene007820:CDS |
| GATAGCATTTACCCAGTCCC+TGG | 0.552763 | 8.1:-53773390 | None:intergenic |
| CTTCTTCAAAGTTAAGAGAT+CGG | 0.555555 | 8.1:-53769698 | None:intergenic |
| TCACTTGTGTATGCTGACAC+GGG | 0.556831 | 8.1:+53765503 | MS.gene007820:CDS |
| TTTCAGGATGTTCCCACCAC+AGG | 0.559339 | 8.1:+53769931 | MS.gene007820:CDS |
| CTCTAAACCTCTTCATCAGT+GGG | 0.562428 | 8.1:-53767451 | None:intergenic |
| GGTTACGTGTACAATTATGA+AGG | 0.562441 | 8.1:+53764535 | MS.gene007820:CDS |
| GAACAACCTGCTATCACACT+TGG | 0.566917 | 8.1:-53767210 | None:intergenic |
| AAATTCACCTTCAAATAGCA+TGG | 0.570364 | 8.1:+53769764 | MS.gene007820:CDS |
| ACTACTGTCTCCACAAAGGT+TGG | 0.570979 | 8.1:-53764503 | None:intergenic |
| AGGATTCATCACCAAGGAGG+AGG | 0.573700 | 8.1:+53773442 | MS.gene007820:CDS |
| TTTCAATGGATCATATATAC+GGG | 0.575038 | 8.1:+53773615 | MS.gene007820:CDS |
| GTACTCTCTGATGATTCAGA+TGG | 0.580613 | 8.1:-53769732 | None:intergenic |
| CGCTCTTCCAAGGAATGGGG+TGG | 0.581585 | 8.1:-53772538 | None:intergenic |
| GTGTGTAATATCCAGGGACT+GGG | 0.582085 | 8.1:+53773379 | MS.gene007820:CDS |
| TCATCTATTGATAACTTCAG+AGG | 0.582464 | 8.1:-53764744 | None:intergenic |
| TTAGGCAACCGGCATCTGGG+TGG | 0.584004 | 8.1:-53773547 | None:intergenic |
| ATGATTGACCTGATGAAGAA+TGG | 0.584281 | 8.1:-53762032 | None:intergenic |
| TGGAGATGCATCGAATCGGA+CGG | 0.584719 | 8.1:-53767289 | None:intergenic |
| TCTATTGATAACTTCAGAGG+AGG | 0.585690 | 8.1:-53764741 | None:intergenic |
| CTGATGAAGAGGTTTAGAGT+TGG | 0.586232 | 8.1:+53767455 | MS.gene007820:CDS |
| GGAGATGCATCGAATCGGAC+GGG | 0.587647 | 8.1:-53767288 | None:intergenic |
| GATGAAATGAGAAGAAACGA+AGG | 0.596652 | 8.1:+53761905 | MS.gene007820:CDS |
| CTGAGCTGTCCCGTTTGGGA+AGG | 0.597914 | 8.1:+53774528 | MS.gene007820:CDS |
| CACTTGTGTATGCTGACACG+GGG | 0.600002 | 8.1:+53765504 | MS.gene007820:CDS |
| TTGGAACACAAAATCTGATG+AGG | 0.600332 | 8.1:-53767232 | None:intergenic |
| TCGGACGGGTGTTTGTCTGA+AGG | 0.602563 | 8.1:-53767274 | None:intergenic |
| TGGATATTACACACGCTACA+GGG | 0.607476 | 8.1:-53773370 | None:intergenic |
| CAATGCTTCTTAGAATCTCA+AGG | 0.610813 | 8.1:-53773289 | None:intergenic |
| CTATTGATAACTTCAGAGGA+GGG | 0.614350 | 8.1:-53764740 | None:intergenic |
| ACATGTGGAACTTCTGTCCA+AGG | 0.615922 | 8.1:-53763634 | None:intergenic |
| TATTCGGCTTCACATTAATG+GGG | 0.619662 | 8.1:+53764402 | MS.gene007820:CDS |
| ACTCTAAACCTCTTCATCAG+TGG | 0.621417 | 8.1:-53767452 | None:intergenic |
| ATGGGTTCATGTTGGATGTG+AGG | 0.626398 | 8.1:+53763687 | MS.gene007820:CDS |
| TCAAAATCAACAGTAACATG+TGG | 0.626757 | 8.1:-53763649 | None:intergenic |
| CCTGATGAAGAATGGTGGTA+GGG | 0.632209 | 8.1:-53762024 | None:intergenic |
| TGAGATTCTAAGAAGCATTG+CGG | 0.636449 | 8.1:+53773292 | MS.gene007820:CDS |
| AGATGAATCATCCATATCTG+AGG | 0.644094 | 8.1:+53764761 | MS.gene007820:CDS |
| AACCTTTGTGGAGACAGTAG+TGG | 0.645377 | 8.1:+53764505 | MS.gene007820:CDS |
| CCAGGAGGATTTCAAGAACG+TGG | 0.650281 | 8.1:+53773485 | MS.gene007820:CDS |
| ACCTGATGAAGAATGGTGGT+AGG | 0.654856 | 8.1:-53762025 | None:intergenic |
| CTGCGCTCTTCCAAGGAATG+GGG | 0.656673 | 8.1:-53772541 | None:intergenic |
| ATGAAATGAGAAGAAACGAA+GGG | 0.660758 | 8.1:+53761906 | MS.gene007820:CDS |
| CACCACTACTGTCTCCACAA+AGG | 0.671743 | 8.1:-53764507 | None:intergenic |
| GGAGACAGTAGTGGTGTGCA+GGG | 0.672818 | 8.1:+53764514 | MS.gene007820:CDS |
| GAAGAAAGTGATGGTGTTTG+GGG | 0.673785 | 8.1:+53764789 | MS.gene007820:CDS |
| CCATCATAGCTAGACAAAAG+GGG | 0.681924 | 8.1:-53765560 | None:intergenic |
| CCCCACCATAAAGCAATCTG+GGG | 0.685299 | 8.1:+53767511 | MS.gene007820:CDS |
| GAGGTTGAAGAAGAAAGTGA+TGG | 0.685547 | 8.1:+53764780 | MS.gene007820:CDS |
| TGTAGCGTGTGTAATATCCA+GGG | 0.688612 | 8.1:+53773373 | MS.gene007820:CDS |
| TAACACAAAATTATCCACGC+TGG | 0.694520 | 8.1:+53767319 | MS.gene007820:CDS |
| GCTTCACTTCAAGGTCCAGG+AGG | 0.697928 | 8.1:+53773470 | MS.gene007820:CDS |
| ACTTGTGTATGCTGACACGG+GGG | 0.701144 | 8.1:+53765505 | MS.gene007820:CDS |
| TGAAGGATTCATCACCAAGG+AGG | 0.729057 | 8.1:+53773439 | MS.gene007820:CDS |
| ATTGACCTGATGAAGAATGG+TGG | 0.747228 | 8.1:-53762029 | None:intergenic |
| GATTGAAGGATTCATCACCA+AGG | 0.751713 | 8.1:+53773436 | MS.gene007820:CDS |
| TGAATCATCAGAGAGTACAG+GGG | 0.779447 | 8.1:+53769737 | MS.gene007820:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 53761896 | 53774553 | 53761896 | ID=MS.gene007820 |
| chr8.1 | mRNA | 53761896 | 53774553 | 53761896 | ID=MS.gene007820.t1;Parent=MS.gene007820 |
| chr8.1 | exon | 53761896 | 53762045 | 53761896 | ID=MS.gene007820.t1.exon1;Parent=MS.gene007820.t1 |
| chr8.1 | CDS | 53761896 | 53762045 | 53761896 | ID=cds.MS.gene007820.t1;Parent=MS.gene007820.t1 |
| chr8.1 | exon | 53763520 | 53763708 | 53763520 | ID=MS.gene007820.t1.exon2;Parent=MS.gene007820.t1 |
| chr8.1 | CDS | 53763520 | 53763708 | 53763520 | ID=cds.MS.gene007820.t1;Parent=MS.gene007820.t1 |
| chr8.1 | exon | 53764388 | 53764597 | 53764388 | ID=MS.gene007820.t1.exon3;Parent=MS.gene007820.t1 |
| chr8.1 | CDS | 53764388 | 53764597 | 53764388 | ID=cds.MS.gene007820.t1;Parent=MS.gene007820.t1 |
| chr8.1 | exon | 53764738 | 53764827 | 53764738 | ID=MS.gene007820.t1.exon4;Parent=MS.gene007820.t1 |
| chr8.1 | CDS | 53764738 | 53764827 | 53764738 | ID=cds.MS.gene007820.t1;Parent=MS.gene007820.t1 |
| chr8.1 | exon | 53765313 | 53765390 | 53765313 | ID=MS.gene007820.t1.exon5;Parent=MS.gene007820.t1 |
| chr8.1 | CDS | 53765313 | 53765390 | 53765313 | ID=cds.MS.gene007820.t1;Parent=MS.gene007820.t1 |
| chr8.1 | exon | 53765494 | 53765658 | 53765494 | ID=MS.gene007820.t1.exon6;Parent=MS.gene007820.t1 |
| chr8.1 | CDS | 53765494 | 53765658 | 53765494 | ID=cds.MS.gene007820.t1;Parent=MS.gene007820.t1 |
| chr8.1 | exon | 53767203 | 53767571 | 53767203 | ID=MS.gene007820.t1.exon7;Parent=MS.gene007820.t1 |
| chr8.1 | CDS | 53767203 | 53767571 | 53767203 | ID=cds.MS.gene007820.t1;Parent=MS.gene007820.t1 |
| chr8.1 | exon | 53769666 | 53769952 | 53769666 | ID=MS.gene007820.t1.exon8;Parent=MS.gene007820.t1 |
| chr8.1 | CDS | 53769666 | 53769952 | 53769666 | ID=cds.MS.gene007820.t1;Parent=MS.gene007820.t1 |
| chr8.1 | exon | 53772466 | 53772628 | 53772466 | ID=MS.gene007820.t1.exon9;Parent=MS.gene007820.t1 |
| chr8.1 | CDS | 53772466 | 53772628 | 53772466 | ID=cds.MS.gene007820.t1;Parent=MS.gene007820.t1 |
| chr8.1 | exon | 53773287 | 53773636 | 53773287 | ID=MS.gene007820.t1.exon10;Parent=MS.gene007820.t1 |
| chr8.1 | CDS | 53773287 | 53773636 | 53773287 | ID=cds.MS.gene007820.t1;Parent=MS.gene007820.t1 |
| chr8.1 | exon | 53774472 | 53774553 | 53774472 | ID=MS.gene007820.t1.exon11;Parent=MS.gene007820.t1 |
| chr8.1 | CDS | 53774472 | 53774553 | 53774472 | ID=cds.MS.gene007820.t1;Parent=MS.gene007820.t1 |
| Gene Sequence |
| Protein sequence |
