AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene00786

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene00786.t1 MTR_2g023930 96.270 563 11 3 1 563 1 553 0.0 1109
MS.gene00786.t1 MTR_4g132430 54.227 485 151 20 59 524 27 459 3.19e-138 410
MS.gene00786.t1 MTR_2g088000 46.995 549 196 19 62 556 81 588 1.57e-125 381
MS.gene00786.t1 MTR_4g132430 56.989 372 102 14 164 524 1 325 6.27e-114 343
MS.gene00786.t1 MTR_3g053330 43.685 483 195 14 60 535 32 444 1.83e-109 335
MS.gene00786.t1 MTR_4g049760 40.454 529 226 15 67 550 35 519 5.36e-94 298
MS.gene00786.t1 MTR_4g049790 39.053 507 231 16 67 542 60 519 1.60e-93 297
MS.gene00786.t1 MTR_4g047580 38.780 508 240 18 67 542 30 498 1.19e-89 286
MS.gene00786.t1 MTR_7g110720 41.309 489 170 16 67 545 30 411 7.41e-86 273
MS.gene00786.t1 MTR_7g110720 52.536 276 76 7 276 545 158 384 4.19e-73 239
MS.gene00786.t1 MTR_7g009730 32.755 461 222 13 150 541 47 488 1.74e-55 197
MS.gene00786.t1 MTR_2g045360 33.967 421 183 14 143 541 68 415 2.25e-55 193
MS.gene00786.t1 MTR_4g107970 36.667 480 226 16 143 555 70 538 6.41e-46 171
MS.gene00786.t1 MTR_4g094412 38.415 328 167 10 76 388 8 315 1.12e-45 167
MS.gene00786.t1 MTR_4g094412 36.808 307 159 10 76 367 17 303 1.64e-45 167
MS.gene00786.t1 MTR_4g107970 37.554 466 213 16 157 555 7 461 1.95e-45 168
MS.gene00786.t1 MTR_6g038890 53.548 155 44 7 185 337 90 218 1.45e-36 135
MS.gene00786.t1 MTR_5g044695 90.476 63 6 0 275 337 45 107 3.25e-35 128
MS.gene00786.t1 MTR_1g013760 33.191 235 110 5 150 383 28 216 1.58e-28 115
MS.gene00786.t1 MTR_4g007060 38.816 152 69 4 282 433 103 230 3.43e-27 111
MS.gene00786.t1 MTR_4g007060 38.816 152 69 4 282 433 137 264 4.37e-27 112
MS.gene00786.t1 MTR_3g056100 30.877 285 142 10 112 369 220 476 4.61e-25 109
MS.gene00786.t1 MTR_3g056100 30.877 285 142 10 112 369 76 332 5.92e-25 108
MS.gene00786.t1 MTR_5g094430 55.000 80 35 1 290 369 213 291 7.44e-25 107
MS.gene00786.t1 MTR_5g094430 55.000 80 35 1 290 369 235 313 7.80e-25 107
MS.gene00786.t1 MTR_3g056100 32.000 275 139 11 112 369 220 463 1.45e-24 108
MS.gene00786.t1 MTR_3g056100 32.000 275 139 11 112 369 76 319 2.11e-24 106
MS.gene00786.t1 MTR_7g011820 35.294 170 104 3 217 382 317 484 2.56e-24 107
MS.gene00786.t1 MTR_5g094430 55.000 80 35 1 290 369 347 425 2.74e-24 107
MS.gene00786.t1 MTR_1g013790 45.918 98 51 1 302 397 96 193 2.75e-24 102
MS.gene00786.t1 MTR_3g106060 50.588 85 42 0 292 376 123 207 3.50e-24 103
MS.gene00786.t1 MTR_3g009470 50.000 90 44 1 280 369 468 556 1.68e-23 105
MS.gene00786.t1 MTR_3g009470 44.086 93 50 2 276 368 249 339 1.44e-16 83.6
MS.gene00786.t1 MTR_7g109800 48.421 95 44 2 291 385 129 218 1.86e-23 101
MS.gene00786.t1 MTR_3g031220 53.165 79 36 1 289 367 347 424 2.49e-23 103
MS.gene00786.t1 MTR_3g031220 30.872 149 70 4 221 369 143 258 3.04e-11 66.2
MS.gene00786.t1 MTR_4g013260 53.165 79 36 1 289 367 318 395 3.23e-23 103
MS.gene00786.t1 MTR_4g013260 42.667 75 40 2 293 367 172 243 3.06e-14 75.9
MS.gene00786.t1 MTR_5g074400 53.086 81 37 1 289 369 402 481 5.28e-23 103
MS.gene00786.t1 MTR_5g074400 51.667 60 27 2 308 367 244 301 1.79e-13 73.6
MS.gene00786.t1 MTR_7g071120 52.326 86 40 1 284 369 301 385 5.30e-23 102
MS.gene00786.t1 MTR_3g104750 50.000 76 37 1 290 365 87 161 7.35e-23 95.9
MS.gene00786.t1 MTR_5g042920 45.918 98 52 1 289 386 302 398 2.31e-22 100
MS.gene00786.t1 MTR_5g042920 39.583 96 56 2 308 403 152 245 4.82e-13 71.6
MS.gene00786.t1 MTR_2g105060 51.190 84 36 2 289 367 71 154 3.51e-22 96.3
MS.gene00786.t1 MTR_5g097490 45.631 103 49 3 282 379 222 322 3.93e-22 99.0
MS.gene00786.t1 MTR_5g097490 41.250 80 45 2 305 384 90 167 2.98e-11 65.9
MS.gene00786.t1 MTR_2g105060 51.190 84 36 2 289 367 146 229 3.97e-22 97.8
MS.gene00786.t1 MTR_4g082580 47.368 95 46 2 289 380 260 353 4.83e-22 98.6
MS.gene00786.t1 MTR_4g094588 45.055 91 49 1 294 384 165 254 5.59e-22 97.8
MS.gene00786.t1 MTR_1g015140 42.424 99 55 2 267 365 63 159 7.40e-22 92.8
MS.gene00786.t1 MTR_7g080020 52.500 80 37 1 290 369 476 554 7.71e-22 100
MS.gene00786.t1 MTR_7g080020 50.000 60 28 2 308 367 281 338 2.18e-11 67.4
MS.gene00786.t1 MTR_2g033820 44.348 115 53 4 291 401 187 294 7.84e-22 98.2
MS.gene00786.t1 MTR_7g028415 53.521 71 32 1 296 366 82 151 8.23e-22 93.2
MS.gene00786.t1 MTR_7g028710 53.521 71 32 1 296 366 82 151 8.23e-22 93.2
MS.gene00786.t1 MTR_7g080000 52.500 80 37 1 290 369 415 493 1.25e-21 99.8
MS.gene00786.t1 MTR_7g080000 47.692 65 32 2 303 367 230 292 1.17e-11 68.2
MS.gene00786.t1 MTR_7g079010 35.260 173 98 5 195 365 38 198 2.15e-21 93.2
MS.gene00786.t1 MTR_1g086790 43.269 104 57 2 291 393 142 244 8.90e-21 94.0
MS.gene00786.t1 MTR_7g100510 41.837 98 56 1 270 367 324 420 1.98e-20 94.4
MS.gene00786.t1 MTR_7g100510 43.902 82 40 3 308 389 190 265 2.87e-12 69.3
MS.gene00786.t1 MTR_7g109600 45.361 97 44 2 290 380 30 123 2.56e-20 91.3
MS.gene00786.t1 MTR_8g092010 45.946 74 39 1 294 367 95 167 4.89e-20 88.6
MS.gene00786.t1 MTR_5g043880 50.000 78 38 1 287 364 104 180 9.15e-20 90.1
MS.gene00786.t1 MTR_4g122530 47.619 84 42 2 291 374 192 273 1.46e-19 91.7
MS.gene00786.t1 MTR_5g091390 50.000 74 36 1 294 367 144 216 3.15e-19 89.0
MS.gene00786.t1 MTR_4g130900 49.367 79 37 2 291 367 343 420 4.90e-19 90.9
MS.gene00786.t1 MTR_1g009613 48.649 74 38 0 291 364 246 319 5.57e-19 89.0
MS.gene00786.t1 MTR_5g016610 50.000 76 38 0 291 366 183 258 6.68e-19 87.4
MS.gene00786.t1 MTR_8g087000 59.016 61 25 0 307 367 77 137 8.37e-19 86.7
MS.gene00786.t1 MTR_8g007270 48.000 75 38 1 290 364 137 210 8.78e-19 85.9
MS.gene00786.t1 MTR_8g087000 59.016 61 25 0 307 367 76 136 9.20e-19 86.3
MS.gene00786.t1 MTR_4g094908 49.367 79 40 0 291 369 250 328 1.04e-18 88.2
MS.gene00786.t1 MTR_2g032030 51.316 76 37 0 307 382 267 342 1.87e-18 89.0
MS.gene00786.t1 MTR_1g070455 46.429 84 45 0 291 374 277 360 2.14e-18 87.4
MS.gene00786.t1 MTR_2g016770 56.452 62 27 0 307 368 35 96 2.67e-18 84.3
MS.gene00786.t1 MTR_2g032030 51.316 76 37 0 307 382 267 342 3.69e-18 87.4
MS.gene00786.t1 MTR_2g083870 54.286 70 32 0 298 367 71 140 3.69e-18 85.1
MS.gene00786.t1 MTR_2g016770 56.452 62 27 0 307 368 27 88 3.85e-18 83.6
MS.gene00786.t1 MTR_3g095080 46.667 75 39 1 290 364 151 224 3.90e-18 84.3
MS.gene00786.t1 MTR_3g095080 46.667 75 39 1 290 364 127 200 4.50e-18 83.6
MS.gene00786.t1 MTR_3g095040 47.297 74 38 1 294 367 105 177 6.93e-18 82.8
MS.gene00786.t1 MTR_8g096730 45.570 79 42 1 292 370 55 132 9.37e-18 80.9
MS.gene00786.t1 MTR_0117s0040 45.652 92 47 1 273 364 43 131 9.59e-18 83.6
MS.gene00786.t1 MTR_2g024350 34.074 135 79 3 302 426 3 137 1.80e-17 82.0
MS.gene00786.t1 MTR_4g127040 50.000 74 37 0 291 364 229 302 2.24e-17 83.6
MS.gene00786.t1 MTR_7g079040 50.000 74 37 0 304 377 151 224 2.29e-17 84.0
MS.gene00786.t1 MTR_1g077780 43.478 92 50 2 291 382 46 135 2.48e-17 79.3
MS.gene00786.t1 MTR_3g009470 44.086 93 50 2 276 368 249 339 6.61e-17 84.3
MS.gene00786.t1 MTR_8g092140 46.053 76 39 2 290 364 142 216 9.41e-17 80.1
MS.gene00786.t1 MTR_8g028565 36.036 111 66 1 272 377 115 225 9.80e-17 82.0
MS.gene00786.t1 MTR_3g108960 47.297 74 39 0 291 364 298 371 1.12e-16 82.8
MS.gene00786.t1 MTR_8g098945 44.444 72 40 0 306 377 128 199 1.48e-15 77.4
MS.gene00786.t1 MTR_2g024380 45.455 66 36 0 302 367 246 311 1.65e-15 79.7
MS.gene00786.t1 MTR_1g099600 45.205 73 40 0 305 377 183 255 4.61e-15 76.6
MS.gene00786.t1 MTR_4g007060 42.857 63 36 0 282 344 137 199 1.70e-14 73.6
MS.gene00786.t1 MTR_7g062220 37.190 121 59 3 267 372 70 188 2.03e-14 74.7
MS.gene00786.t1 MTR_6g086555 46.667 75 38 2 294 367 193 266 2.87e-14 75.5
MS.gene00786.t1 MTR_1g078260 43.056 72 39 2 294 364 234 304 3.23e-13 72.4
MS.gene00786.t1 MTR_3g090860 54.237 59 25 1 306 362 132 190 5.27e-13 70.9
MS.gene00786.t1 MTR_5g067680 42.529 87 38 2 308 382 203 289 8.37e-13 70.5
MS.gene00786.t1 MTR_8g027860 49.275 69 28 2 306 367 135 203 5.73e-12 67.8
MS.gene00786.t1 MTR_3g031220 30.872 149 70 4 221 369 143 258 1.58e-11 66.6
MS.gene00786.t1 MTR_5g044695 42.735 117 43 6 192 306 8 102 1.80e-11 61.2
MS.gene00786.t1 MTR_6g053200 31.373 102 68 2 268 367 289 390 6.00e-11 65.5
MS.gene00786.t1 MTR_8g069935 31.461 89 49 1 291 367 303 391 6.71e-11 65.1
MS.gene00786.t1 MTR_7g073380 35.294 102 63 2 288 386 103 204 9.85e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene00786.t1 AT1G62300 50.825 606 182 30 1 544 1 552 1.45e-152 449
MS.gene00786.t1 AT4G04450 52.299 522 158 23 62 535 25 503 1.86e-141 420
MS.gene00786.t1 AT4G04450 55.088 452 119 21 125 535 1 409 1.78e-129 385
MS.gene00786.t1 AT4G22070 52.990 485 167 19 43 479 1 472 3.80e-120 365
MS.gene00786.t1 AT4G22070 52.990 485 167 19 43 479 1 472 3.80e-120 365
MS.gene00786.t1 AT4G22070 52.990 485 167 19 43 479 1 472 3.80e-120 365
MS.gene00786.t1 AT4G22070 52.990 485 167 19 43 479 1 472 3.80e-120 365
MS.gene00786.t1 AT4G01720 42.032 433 179 15 110 532 73 443 1.04e-63 217
MS.gene00786.t1 AT5G15130 33.261 460 211 13 143 536 35 464 4.50e-50 181
MS.gene00786.t1 AT1G68150 40.711 253 108 8 146 388 96 316 6.74e-49 174
MS.gene00786.t1 AT5G15130 33.186 452 206 13 151 536 1 422 2.75e-48 176
MS.gene00786.t1 AT1G18860 32.573 482 249 13 132 537 30 511 1.89e-43 162
MS.gene00786.t1 AT1G69810 33.846 325 191 8 128 437 14 329 1.49e-41 154
MS.gene00786.t1 AT1G69810 53.691 149 63 3 290 437 128 271 6.35e-37 140
MS.gene00786.t1 AT4G31800 34.156 243 123 5 145 385 47 254 1.35e-31 124
MS.gene00786.t1 AT1G80840 31.641 256 114 7 116 367 8 206 4.04e-29 117
MS.gene00786.t1 AT4G31800 50.505 99 44 2 292 385 91 189 7.14e-25 103
MS.gene00786.t1 AT2G38470 49.451 91 45 1 289 379 344 433 8.03e-25 108
MS.gene00786.t1 AT2G38470 51.667 60 27 2 308 367 185 242 2.47e-13 73.2
MS.gene00786.t1 AT4G26640 53.846 78 35 1 290 367 188 264 6.76e-24 104
MS.gene00786.t1 AT4G26640 37.363 91 55 2 277 367 5 93 5.69e-13 71.2
MS.gene00786.t1 AT4G26640 53.846 78 35 1 290 367 188 264 6.76e-24 104
MS.gene00786.t1 AT4G26640 37.363 91 55 2 277 367 5 93 5.69e-13 71.2
MS.gene00786.t1 AT4G26640 53.846 78 35 1 290 367 188 264 6.76e-24 104
MS.gene00786.t1 AT4G26640 37.363 91 55 2 277 367 5 93 5.69e-13 71.2
MS.gene00786.t1 AT4G26640 53.846 78 35 1 290 367 188 264 6.76e-24 104
MS.gene00786.t1 AT4G26640 37.363 91 55 2 277 367 5 93 5.69e-13 71.2
MS.gene00786.t1 AT2G25000 48.864 88 45 0 285 372 81 168 1.18e-23 100
MS.gene00786.t1 AT2G25000 48.864 88 45 0 285 372 81 168 1.18e-23 100
MS.gene00786.t1 AT2G25000 46.237 93 50 0 280 372 98 190 1.37e-23 100
MS.gene00786.t1 AT4G26640 53.846 78 35 1 290 367 292 368 1.59e-23 104
MS.gene00786.t1 AT4G26640 37.363 91 55 2 277 367 109 197 6.62e-13 71.6
MS.gene00786.t1 AT4G26640 53.846 78 35 1 290 367 324 400 1.60e-23 104
MS.gene00786.t1 AT4G26640 37.363 91 55 2 277 367 141 229 6.62e-13 71.6
MS.gene00786.t1 AT1G29860 36.774 155 86 4 248 396 82 230 1.97e-23 100
MS.gene00786.t1 AT1G13960 53.571 84 38 1 284 367 233 315 2.22e-23 102
MS.gene00786.t1 AT1G13960 51.667 60 27 2 308 367 77 134 2.01e-12 69.3
MS.gene00786.t1 AT2G25000 48.864 88 45 0 285 372 124 211 2.27e-23 100
MS.gene00786.t1 AT4G26640 53.846 78 35 1 290 367 364 440 2.30e-23 104
MS.gene00786.t1 AT4G26640 37.363 91 55 2 277 367 181 269 7.70e-13 71.6
MS.gene00786.t1 AT1G13960 53.571 84 38 1 284 367 386 468 2.78e-23 103
MS.gene00786.t1 AT1G13960 51.667 60 27 2 308 367 230 287 1.45e-12 70.5
MS.gene00786.t1 AT5G26170 51.389 72 34 1 293 364 99 169 4.60e-23 96.7
MS.gene00786.t1 AT5G56270 49.438 89 44 1 281 369 461 548 5.38e-23 103
MS.gene00786.t1 AT5G56270 50.820 61 28 2 308 368 274 332 5.67e-12 68.9
MS.gene00786.t1 AT4G18170 48.913 92 45 2 277 367 141 231 9.93e-23 99.8
MS.gene00786.t1 AT5G49520 51.948 77 36 1 291 367 205 280 1.03e-22 100
MS.gene00786.t1 AT2G03340 51.163 86 41 1 284 369 392 476 2.04e-22 101
MS.gene00786.t1 AT2G03340 51.667 60 27 2 308 367 251 308 5.65e-13 72.0
MS.gene00786.t1 AT5G07100 47.126 87 45 1 281 367 115 200 3.07e-22 95.9
MS.gene00786.t1 AT5G07100 41.096 73 42 1 308 380 25 96 2.01e-11 64.3
MS.gene00786.t1 AT5G07100 47.126 87 45 1 281 367 115 200 3.07e-22 95.9
MS.gene00786.t1 AT5G07100 41.096 73 42 1 308 380 25 96 2.01e-11 64.3
MS.gene00786.t1 AT5G07100 47.126 87 45 1 281 367 115 200 3.07e-22 95.9
MS.gene00786.t1 AT5G07100 41.096 73 42 1 308 380 25 96 2.01e-11 64.3
MS.gene00786.t1 AT5G07100 47.126 87 45 1 281 367 115 200 3.07e-22 95.9
MS.gene00786.t1 AT5G07100 41.096 73 42 1 308 380 25 96 2.01e-11 64.3
MS.gene00786.t1 AT2G04880 44.828 87 47 1 286 372 262 347 3.58e-22 100
MS.gene00786.t1 AT2G04880 46.970 66 33 2 305 370 109 172 3.23e-12 69.3
MS.gene00786.t1 AT2G04880 44.828 87 47 1 286 372 286 371 4.75e-22 100
MS.gene00786.t1 AT2G04880 46.970 66 33 2 305 370 109 172 3.86e-12 69.3
MS.gene00786.t1 AT5G07100 47.126 87 45 1 281 367 208 293 5.23e-22 97.4
MS.gene00786.t1 AT5G07100 41.096 73 42 1 308 380 118 189 3.72e-11 65.1
MS.gene00786.t1 AT1G64000 48.235 85 43 1 281 365 88 171 5.98e-22 94.4
MS.gene00786.t1 AT5G41570 53.750 80 35 2 287 365 77 155 6.69e-22 93.6
MS.gene00786.t1 AT5G46350 48.864 88 43 2 294 380 170 256 1.08e-21 96.7
MS.gene00786.t1 AT3G01080 47.619 84 43 1 284 367 283 365 3.61e-21 96.7
MS.gene00786.t1 AT3G01080 51.667 60 27 2 308 367 168 225 2.26e-11 66.6
MS.gene00786.t1 AT3G01080 47.619 84 43 1 284 367 321 403 4.23e-21 96.7
MS.gene00786.t1 AT3G01080 51.667 60 27 2 308 367 206 263 2.21e-11 66.6
MS.gene00786.t1 AT2G30250 51.250 80 38 1 290 369 311 389 6.61e-21 95.5
MS.gene00786.t1 AT2G47260 43.243 111 58 2 283 389 150 259 7.96e-21 94.4
MS.gene00786.t1 AT2G46130 48.780 82 41 1 284 365 7 87 1.18e-20 87.8
MS.gene00786.t1 AT1G55600 44.444 90 49 1 280 369 280 368 1.59e-20 95.1
MS.gene00786.t1 AT5G13080 43.000 100 56 1 267 366 27 125 1.73e-20 88.6
MS.gene00786.t1 AT4G30935 44.554 101 45 3 291 383 315 412 3.74e-20 94.0
MS.gene00786.t1 AT4G26440 45.545 101 52 2 291 391 356 453 5.47e-20 94.0
MS.gene00786.t1 AT2G30590 50.000 82 40 1 291 371 297 378 1.01e-19 91.7
MS.gene00786.t1 AT3G01970 43.137 102 57 1 263 364 21 121 1.35e-19 85.9
MS.gene00786.t1 AT1G29280 51.429 70 34 0 298 367 65 134 1.38e-19 89.4
MS.gene00786.t1 AT4G31800 31.683 202 101 5 145 344 47 213 1.80e-19 88.2
MS.gene00786.t1 AT1G69310 42.353 85 48 1 280 364 120 203 2.06e-19 89.4
MS.gene00786.t1 AT1G69310 42.353 85 48 1 280 364 120 203 2.06e-19 89.4
MS.gene00786.t1 AT1G69310 42.353 85 48 1 280 364 120 203 2.06e-19 89.4
MS.gene00786.t1 AT2G44745 40.909 88 51 1 277 364 115 201 2.57e-19 87.4
MS.gene00786.t1 AT2G23320 57.627 59 25 0 308 366 241 299 4.44e-19 89.0
MS.gene00786.t1 AT5G64810 47.887 71 36 1 294 364 97 166 5.38e-19 85.9
MS.gene00786.t1 AT4G24240 50.000 76 38 0 291 366 265 340 1.10e-18 88.2
MS.gene00786.t1 AT3G62340 50.000 78 38 1 294 371 105 181 1.30e-18 86.7
MS.gene00786.t1 AT5G28650 48.649 74 38 0 291 364 246 319 2.09e-18 87.0
MS.gene00786.t1 AT3G58710 52.857 70 33 0 298 367 62 131 2.36e-18 85.9
MS.gene00786.t1 AT3G58710 52.857 70 33 0 298 367 61 130 2.48e-18 85.9
MS.gene00786.t1 AT4G39410 43.902 82 45 1 283 364 199 279 2.73e-18 86.3
MS.gene00786.t1 AT2G34830 48.193 83 42 1 293 374 200 282 9.34e-18 86.3
MS.gene00786.t1 AT3G04670 47.297 74 39 0 291 364 246 319 1.13e-17 84.7
MS.gene00786.t1 AT1G30650 48.193 83 42 1 293 374 202 284 1.15e-17 85.9
MS.gene00786.t1 AT2G34830 48.193 83 42 1 293 374 209 291 1.21e-17 85.9
MS.gene00786.t1 AT2G24570 48.649 74 38 0 291 364 227 300 1.30e-17 84.7
MS.gene00786.t1 AT4G23550 45.679 81 44 0 302 382 135 215 1.97e-17 84.0
MS.gene00786.t1 AT4G31550 47.297 74 39 0 291 364 230 303 2.52e-17 84.0
MS.gene00786.t1 AT4G31550 47.297 74 39 0 291 364 229 302 2.68e-17 83.6
MS.gene00786.t1 AT4G01250 49.296 71 36 0 307 377 128 198 3.30e-17 82.8
MS.gene00786.t1 AT2G37260 49.333 75 34 2 302 373 264 337 7.62e-17 82.8
MS.gene00786.t1 AT2G37260 42.105 76 42 2 308 383 86 159 8.97e-14 73.2
MS.gene00786.t1 AT2G37260 49.333 75 34 2 302 373 262 335 7.68e-17 82.8
MS.gene00786.t1 AT2G37260 42.105 76 42 2 308 383 84 157 8.91e-14 73.2
MS.gene00786.t1 AT5G52830 46.753 77 41 0 301 377 159 235 1.19e-16 82.0
MS.gene00786.t1 AT2G37260 49.333 75 34 2 302 373 344 417 1.48e-16 82.8
MS.gene00786.t1 AT2G37260 42.105 76 42 2 308 383 166 239 1.47e-13 73.2
MS.gene00786.t1 AT2G46130 45.122 82 40 2 284 365 7 83 9.07e-16 73.6
MS.gene00786.t1 AT1G69310 38.824 85 47 2 280 364 120 199 1.72e-14 74.7
MS.gene00786.t1 AT5G45050 50.000 76 36 1 292 367 1028 1101 3.06e-14 76.6
MS.gene00786.t1 AT5G45050 54.098 61 28 0 307 367 1180 1240 3.08e-14 76.6
MS.gene00786.t1 AT5G45050 54.098 61 28 0 307 367 1152 1212 3.22e-14 76.6
MS.gene00786.t1 AT2G21900 43.939 66 36 1 302 367 104 168 6.60e-14 71.2
MS.gene00786.t1 AT5G45260 39.216 102 55 3 283 382 1189 1285 2.95e-13 73.6
MS.gene00786.t1 AT5G43290 41.667 72 40 2 294 364 100 170 4.03e-13 70.5
MS.gene00786.t1 AT2G46400 41.772 79 44 1 286 362 83 161 9.53e-12 66.6
MS.gene00786.t1 AT3G01080 51.667 60 27 2 308 367 206 263 9.82e-12 67.0
MS.gene00786.t1 AT2G40740 47.297 74 34 2 308 376 174 247 3.02e-11 65.1
MS.gene00786.t1 AT2G40740 47.297 74 34 2 308 376 183 256 4.40e-11 64.7

Find 109 sgRNAs with CRISPR-Local

Find 146 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGCCTTGTGTTTCTGATTC+TGG 0.066609 2.3:-64639557 None:intergenic
ATAGCTCTTGCTAATAAATT+TGG 0.198143 2.3:-64640294 None:intergenic
CTTTGAAATTGCAATGGATT+TGG 0.199677 2.3:-64640402 None:intergenic
TTGACAGGAAATCCTAAAAT+AGG 0.296916 2.3:-64638290 None:intergenic
GCGAGAACAGCGGTGAAATT+AGG 0.306985 2.3:-64640663 None:intergenic
TTTGAAATTGCAATGGATTT+GGG 0.309204 2.3:-64640401 None:intergenic
GCTGCTATCTCCTCCATTAT+TGG 0.315481 2.3:+64640687 MS.gene00786:CDS
TGAGAGTGAGATATTGGAAT+TGG 0.324537 2.3:-64638212 None:intergenic
AAAGGGTGAGAGTGAGATAT+TGG 0.336997 2.3:-64638218 None:intergenic
GGATGCCAATGGAGGAAATA+TGG 0.352069 2.3:+64639811 MS.gene00786:CDS
CGCCGTTGGTGTTACGGGTA+AGG 0.353888 2.3:-64638313 None:intergenic
TAAATCCAATATCATCAAAA+AGG 0.354383 2.3:+64638427 MS.gene00786:CDS
GTCTTCGCCGTTGGTGTTAC+GGG 0.361102 2.3:-64638318 None:intergenic
TGCATGGCCACCACCAATAA+TGG 0.361861 2.3:-64640700 None:intergenic
CTTGAGATAGGTACTACTAA+TGG 0.365396 2.3:+64639425 MS.gene00786:CDS
CGTCTTCGCCGTTGGTGTTA+CGG 0.365794 2.3:-64638319 None:intergenic
CAAGTACCTAGTTTCTTTCA+AGG 0.368680 2.3:+64640447 MS.gene00786:CDS
AGGAATAGCAATGGTAAAAC+TGG 0.382516 2.3:+64639521 MS.gene00786:CDS
CTGCAAAGCCGTGTAATTAC+CGG 0.385725 2.3:-64638927 None:intergenic
AAACTCACTTGTTTGCGAAC+TGG 0.388176 2.3:-64639901 None:intergenic
TTTGTCCATATTTCCTCCAT+TGG 0.390389 2.3:-64639816 None:intergenic
TACTACAGATTGATCACTTC+CGG 0.396054 2.3:-64638640 None:intergenic
AAACTAGGTACTTGATGAAA+TGG 0.398773 2.3:-64640438 None:intergenic
CTTCAATTGTCTCAAGAAGT+TGG 0.400880 2.3:+64640531 MS.gene00786:CDS
CCAAGACAATTTCTTGAGAT+AGG 0.405230 2.3:+64639413 MS.gene00786:CDS
GCAGCAAGCATGTTACTATC+AGG 0.425873 2.3:+64640240 MS.gene00786:CDS
GCCATAGCTGCTGGTGGTAG+TGG 0.442906 2.3:-64640195 None:intergenic
GGCGGTGATAGCAGCGGTGG+CGG 0.446253 2.3:-64640637 None:intergenic
ATCTCCTCCATTATTGGTGG+TGG 0.457394 2.3:+64640693 MS.gene00786:CDS
CTATAGTATGCTCGAGGACA+TGG 0.465899 2.3:-64639856 None:intergenic
GGCGGTGACCGGAAAATAAC+CGG 0.466327 2.3:+64638341 MS.gene00786:CDS
GAGATGCTAAGTCATGTTAC+CGG 0.472299 2.3:+64638908 MS.gene00786:CDS
AGCATACTATAGATGCACTA+TGG 0.487105 2.3:+64639867 MS.gene00786:CDS
ACGGCGAAGACGGCGGTGAC+CGG 0.490027 2.3:+64638330 MS.gene00786:CDS
ATTATTATATGGACAAAGCA+TGG 0.490606 2.3:+64638159 None:intergenic
GTGTTACGGGTAAGGTTGAC+AGG 0.491562 2.3:-64638305 None:intergenic
ATTTGCTTGATCTGCAACAT+TGG 0.493278 2.3:-64639615 None:intergenic
TGCTAGATCAGAAGCTTCAA+TGG 0.495447 2.3:+64639676 MS.gene00786:CDS
TGTTGTTGCTATTGTTTGCA+TGG 0.495497 2.3:-64640716 None:intergenic
TGCCGAGGACAAAACAATCT+TGG 0.496599 2.3:+64640143 MS.gene00786:CDS
TGTTGGTTGTGTTCATTTGA+AGG 0.504024 2.3:-64638401 None:intergenic
CAGAATCAGAAACACAAGGC+TGG 0.504762 2.3:+64639558 MS.gene00786:CDS
ATTACGTACCTCAGTAGTCT+TGG 0.513802 2.3:-64638700 None:intergenic
AATAGGAAACATTCTATCGT+TGG 0.514918 2.3:-64638273 None:intergenic
AGAATCAGAAACACAAGGCT+GGG 0.517077 2.3:+64639559 MS.gene00786:CDS
CCATTGCTATTCCTCATCTG+AGG 0.520104 2.3:-64639512 None:intergenic
GTGAGATCTAATGTAACAGT+AGG 0.521520 2.3:-64640366 None:intergenic
TTATTATATGGACAAAGCAT+GGG 0.526634 2.3:+64638160 None:intergenic
GATCAATCTGTAGTAGATGA+TGG 0.527093 2.3:+64638648 MS.gene00786:CDS
GTCACCGCCGTCTTCGCCGT+TGG 0.533790 2.3:-64638327 None:intergenic
GGATCAATGTCAAGTGCAGA+TGG 0.534800 2.3:+64640261 MS.gene00786:CDS
ATAGCAATGGTAAAACTGGT+AGG 0.540414 2.3:+64639525 MS.gene00786:CDS
AGAGAAGAAATCGACTTCAC+CGG 0.540783 2.3:-64638360 None:intergenic
ATCTTGGTAACAACATATGA+AGG 0.541003 2.3:+64640159 MS.gene00786:CDS
GCTATCTCCTCCATTATTGG+TGG 0.542504 2.3:+64640690 MS.gene00786:CDS
CGTAACACCAACGGCGAAGA+CGG 0.544973 2.3:+64638320 MS.gene00786:CDS
GATGCCATTGCCATAGCTGC+TGG 0.545474 2.3:-64640204 None:intergenic
TCCACTACCACCAGCAGCTA+TGG 0.548560 2.3:+64640194 MS.gene00786:CDS
CCAAGGTGTTGGTGGAGCAA+TGG 0.549924 2.3:+64639388 MS.gene00786:CDS
GAATCACCACACTGAAAATG+AGG 0.553361 2.3:+64638976 MS.gene00786:CDS
TGATATTGGATTTAACATGT+TGG 0.558451 2.3:-64638418 None:intergenic
CCATTGCTCCACCAACACCT+TGG 0.560146 2.3:-64639388 None:intergenic
TCTACCTTGTTCAACAAGCA+TGG 0.561460 2.3:+64640317 MS.gene00786:CDS
ATTAACATGGATATTAGAAG+TGG 0.561723 2.3:-64638477 None:intergenic
CCTATCTCAAGAAATTGTCT+TGG 0.566117 2.3:-64639413 None:intergenic
TCAGCTTGCACAATTGCAAG+TGG 0.569056 2.3:+64638847 MS.gene00786:intron
TAGCTGCTGGTGGTAGTGGA+TGG 0.573308 2.3:-64640191 None:intergenic
AATTGCAAGTGGAGCTTCAG+CGG 0.573437 2.3:+64638858 MS.gene00786:CDS
ATATAATTGCAGATAAGTGA+TGG 0.573518 2.3:+64639790 MS.gene00786:intron
TCATGTTACCGGTAATTACA+CGG 0.577854 2.3:+64638919 MS.gene00786:CDS
TTGTTGGCTTGGAGCTTGTG+TGG 0.580944 2.3:-64640568 None:intergenic
CTGACCGAGTCAGCTAAAGA+AGG 0.586174 2.3:-64640612 None:intergenic
TTCTGTCCTTGAAAGAAACT+AGG 0.586929 2.3:-64640453 None:intergenic
TGAGGTCTTTGAAATTGCAA+TGG 0.588002 2.3:-64640408 None:intergenic
ACATGGATATTAGAAGTGGA+AGG 0.594815 2.3:-64638473 None:intergenic
TAACATGCTTGCTGCTGCTG+AGG 0.595156 2.3:-64640232 None:intergenic
TAGCAATGGTAAAACTGGTA+GGG 0.595770 2.3:+64639526 MS.gene00786:CDS
ACAGCCTTCTTTAGCTGACT+CGG 0.597997 2.3:+64640608 MS.gene00786:CDS
TAAGGAAGCTTACATTAACA+TGG 0.598862 2.3:-64638490 None:intergenic
TCGTTGGTATAAGTAGATGA+TGG 0.603216 2.3:-64638257 None:intergenic
AACCTTACCCGTAACACCAA+CGG 0.603945 2.3:+64638311 MS.gene00786:CDS
AATGAGAAAAGCTCGTGTCT+CGG 0.604308 2.3:+64639649 MS.gene00786:CDS
TCTAATGTAACAGTAGGGAA+TGG 0.608110 2.3:-64640360 None:intergenic
GGCTTTGCAGATGCAACTTG+TGG 0.608912 2.3:+64638940 MS.gene00786:CDS
GGTTTACAACTTGCAAACAC+CGG 0.613072 2.3:+64638621 MS.gene00786:CDS
ATCGGCGGTGATAGCAGCGG+TGG 0.617279 2.3:-64640640 None:intergenic
TGAGATCTAATGTAACAGTA+GGG 0.618128 2.3:-64640365 None:intergenic
GAGTCAGCTAAAGAAGGCTG+TGG 0.624335 2.3:-64640606 None:intergenic
GATCAAACACACCTCAGATG+AGG 0.626860 2.3:+64639501 MS.gene00786:CDS
ATAGGTTCAACGTTGTGCCG+AGG 0.627663 2.3:+64640128 MS.gene00786:intron
TATAGATGCACTATGGCAGT+CGG 0.632166 2.3:+64639874 MS.gene00786:CDS
TGATGAAATGGTGCATGTTG+AGG 0.633017 2.3:-64640426 None:intergenic
GTTGCCATGCTTGTTGAACA+AGG 0.639105 2.3:-64640321 None:intergenic
GAATCAGAAACACAAGGCTG+GGG 0.640268 2.3:+64639560 MS.gene00786:CDS
GATAGCAGCTGCGAGAACAG+CGG 0.642227 2.3:-64640673 None:intergenic
AGCGGTGAAATTAGGATCGG+CGG 0.644865 2.3:-64640655 None:intergenic
AACAGCGGTGAAATTAGGAT+CGG 0.645945 2.3:-64640658 None:intergenic
ACCACCAGCAGCTATGGCAA+TGG 0.647355 2.3:+64640200 MS.gene00786:CDS
GCCATTGCCATAGCTGCTGG+TGG 0.651575 2.3:-64640201 None:intergenic
TAAGTGATGGATGCCAATGG+AGG 0.670782 2.3:+64639803 MS.gene00786:CDS
AACACCAACGGCGAAGACGG+CGG 0.671264 2.3:+64638323 MS.gene00786:CDS
GTGCATCTATAGTATGCTCG+AGG 0.675667 2.3:-64639862 None:intergenic
CCTCAGATGAGGAATAGCAA+TGG 0.676716 2.3:+64639512 MS.gene00786:CDS
TATTATATGGACAAAGCATG+GGG 0.678619 2.3:+64638161 None:intergenic
AGGATCGGCGGTGATAGCAG+CGG 0.681008 2.3:-64640643 None:intergenic
ATGGCCACCACCAATAATGG+AGG 0.694001 2.3:-64640697 None:intergenic
TAAACGTGCCAAGACTACTG+AGG 0.716111 2.3:+64638692 MS.gene00786:CDS
AGATAAGTGATGGATGCCAA+TGG 0.716557 2.3:+64639800 MS.gene00786:intron
AGTCCAGAATCAGAAACACA+AGG 0.719780 2.3:+64639554 MS.gene00786:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTAATATTGTTAAAATTC+AGG + chr2.3:64639337-64639356 MS.gene00786:intron 10.0%
!!! AATATTTTATCATTGAATTT+TGG - chr2.3:64638536-64638555 None:intergenic 10.0%
!! AATTAAATCACAATTGATTA+AGG + chr2.3:64639718-64639737 MS.gene00786:intron 15.0%
!! AGAAATATGAGAAATTAATA+AGG - chr2.3:64638511-64638530 None:intergenic 15.0%
!!! ATTGATGTTTTTTTGTTAAT+AGG + chr2.3:64640110-64640129 MS.gene00786:intron 15.0%
!! GTTTATATATCAATTTCATC+TGG - chr2.3:64638813-64638832 None:intergenic 20.0%
!! TAAATCCAATATCATCAAAA+AGG + chr2.3:64638427-64638446 MS.gene00786:CDS 20.0%
!! TATGGAATTCAAATCTTAAA+TGG + chr2.3:64639097-64639116 MS.gene00786:intron 20.0%
!! TTTGTTCAAATATTATAGAC+TGG + chr2.3:64638600-64638619 MS.gene00786:intron 20.0%
!!! TATAATCAGTCAAAATTTTC+TGG + chr2.3:64640507-64640526 MS.gene00786:CDS 20.0%
! AATTTAGAAAAAGCGACATT+TGG - chr2.3:64639978-64639997 None:intergenic 25.0%
! ATAGCTCTTGCTAATAAATT+TGG - chr2.3:64640297-64640316 None:intergenic 25.0%
! ATATAATTGCAGATAAGTGA+TGG + chr2.3:64639790-64639809 MS.gene00786:intron 25.0%
! ATTAACATGGATATTAGAAG+TGG - chr2.3:64638480-64638499 None:intergenic 25.0%
! CAATCTGGCATATAATATAA+GGG - chr2.3:64639303-64639322 None:intergenic 25.0%
! GACTTTGTAAACTCAAAATA+TGG + chr2.3:64639079-64639098 MS.gene00786:intron 25.0%
! TGATATTGGATTTAACATGT+TGG - chr2.3:64638421-64638440 None:intergenic 25.0%
! TTAGTGTATGTTTGATATCA+CGG + chr2.3:64638728-64638747 MS.gene00786:intron 25.0%
! TTATTAACATGTTACCAATC+TGG - chr2.3:64639318-64639337 None:intergenic 25.0%
!! AATACAATTAGCAACTTTTC+AGG + chr2.3:64640765-64640784 MS.gene00786:CDS 25.0%
!! GATAGAATGTTTCCTATTTT+AGG + chr2.3:64638278-64638297 MS.gene00786:CDS 25.0%
!! TTTCTAACTGAATTTTGTGA+TGG + chr2.3:64639765-64639784 MS.gene00786:intron 25.0%
!! TTTGAAATTGCAATGGATTT+GGG - chr2.3:64640404-64640423 None:intergenic 25.0%
!!! AATATTTTCTGAGACTTGTT+TGG - chr2.3:64639587-64639606 None:intergenic 25.0%
!!! AATCTCCTTTTTGATGATAT+TGG - chr2.3:64638435-64638454 None:intergenic 25.0%
!!! CATTTGGACTATTTTTTTAG+TGG - chr2.3:64639962-64639981 None:intergenic 25.0%
AAACTAGGTACTTGATGAAA+TGG - chr2.3:64640441-64640460 None:intergenic 30.0%
AATAGGAAACATTCTATCGT+TGG - chr2.3:64638276-64638295 None:intergenic 30.0%
CCAATCTGGCATATAATATA+AGG - chr2.3:64639304-64639323 None:intergenic 30.0%
CCTTATATTATATGCCAGAT+TGG + chr2.3:64639301-64639320 MS.gene00786:intron 30.0%
GAGGAAATATGGACAAAAAA+TGG + chr2.3:64639822-64639841 MS.gene00786:CDS 30.0%
TAAGGAAGCTTACATTAACA+TGG - chr2.3:64638493-64638512 None:intergenic 30.0%
TATACTAACATCTCATATGC+AGG - chr2.3:64639175-64639194 None:intergenic 30.0%
TATGGACAAAAAATGGCTAA+AGG + chr2.3:64639829-64639848 MS.gene00786:CDS 30.0%
TGAGATCTAATGTAACAGTA+GGG - chr2.3:64640368-64640387 None:intergenic 30.0%
TTAGTGACGAAATTAGAGAT+AGG + chr2.3:64639997-64640016 MS.gene00786:intron 30.0%
TTCATGACATGTCAATTTAG+TGG + chr2.3:64639047-64639066 MS.gene00786:intron 30.0%
TTGACAGGAAATCCTAAAAT+AGG - chr2.3:64638293-64638312 None:intergenic 30.0%
! ATCTTGGTAACAACATATGA+AGG + chr2.3:64640159-64640178 MS.gene00786:CDS 30.0%
! TAATTACCTCATTTTCAGTG+TGG - chr2.3:64638985-64639004 None:intergenic 30.0%
!! CTTTGAAATTGCAATGGATT+TGG - chr2.3:64640405-64640424 None:intergenic 30.0%
!!! GCTGTTTTGAAGGTAAAAAA+GGG - chr2.3:64638238-64638257 None:intergenic 30.0%
AAAACTGAGGAGAAAAACCA+AGG + chr2.3:64639371-64639390 MS.gene00786:CDS 35.0%
ACATGGATATTAGAAGTGGA+AGG - chr2.3:64638476-64638495 None:intergenic 35.0%
AGCATACTATAGATGCACTA+TGG + chr2.3:64639867-64639886 MS.gene00786:CDS 35.0%
AGGAATAGCAATGGTAAAAC+TGG + chr2.3:64639521-64639540 MS.gene00786:CDS 35.0%
ATAGCAATGGTAAAACTGGT+AGG + chr2.3:64639525-64639544 MS.gene00786:CDS 35.0%
ATTTGCTTGATCTGCAACAT+TGG - chr2.3:64639618-64639637 None:intergenic 35.0%
CAAGTACCTAGTTTCTTTCA+AGG + chr2.3:64640447-64640466 MS.gene00786:CDS 35.0%
CCAAGACAATTTCTTGAGAT+AGG + chr2.3:64639413-64639432 MS.gene00786:CDS 35.0%
CCTATCTCAAGAAATTGTCT+TGG - chr2.3:64639416-64639435 None:intergenic 35.0%
CTTCAATTGTCTCAAGAAGT+TGG + chr2.3:64640531-64640550 MS.gene00786:CDS 35.0%
CTTGAGATAGGTACTACTAA+TGG + chr2.3:64639425-64639444 MS.gene00786:CDS 35.0%
GATCAATCTGTAGTAGATGA+TGG + chr2.3:64638648-64638667 MS.gene00786:CDS 35.0%
GGTTGTTAATGCAAAAACTG+AGG + chr2.3:64639358-64639377 MS.gene00786:intron 35.0%
GTGAGATCTAATGTAACAGT+AGG - chr2.3:64640369-64640388 None:intergenic 35.0%
TACTACAGATTGATCACTTC+CGG - chr2.3:64638643-64638662 None:intergenic 35.0%
TAGCAATGGTAAAACTGGTA+GGG + chr2.3:64639526-64639545 MS.gene00786:CDS 35.0%
TCATGTTACCGGTAATTACA+CGG + chr2.3:64638919-64638938 MS.gene00786:CDS 35.0%
TCGTTGGTATAAGTAGATGA+TGG - chr2.3:64638260-64638279 None:intergenic 35.0%
TCTAATGTAACAGTAGGGAA+TGG - chr2.3:64640363-64640382 None:intergenic 35.0%
TGAGAGTGAGATATTGGAAT+TGG - chr2.3:64638215-64638234 None:intergenic 35.0%
TTCTGTCCTTGAAAGAAACT+AGG - chr2.3:64640456-64640475 None:intergenic 35.0%
TTTGTCCATATTTCCTCCAT+TGG - chr2.3:64639819-64639838 None:intergenic 35.0%
! GTTGTTGTTGTTGTTGTTGT+TGG - chr2.3:64640587-64640606 None:intergenic 35.0%
! TGTTGGTTGTGTTCATTTGA+AGG - chr2.3:64638404-64638423 None:intergenic 35.0%
! TGTTGTTGCTATTGTTTGCA+TGG - chr2.3:64640719-64640738 None:intergenic 35.0%
!! TACCAAGATTGTTTTGTCCT+CGG - chr2.3:64640148-64640167 None:intergenic 35.0%
!! TGAGGTCTTTGAAATTGCAA+TGG - chr2.3:64640411-64640430 None:intergenic 35.0%
!!! GGCTGTTTTGAAGGTAAAAA+AGG - chr2.3:64638239-64638258 None:intergenic 35.0%
AAACTCACTTGTTTGCGAAC+TGG - chr2.3:64639904-64639923 None:intergenic 40.0%
AAAGGGTGAGAGTGAGATAT+TGG - chr2.3:64638221-64638240 None:intergenic 40.0%
AACAGCGGTGAAATTAGGAT+CGG - chr2.3:64640661-64640680 None:intergenic 40.0%
AATGAGAAAAGCTCGTGTCT+CGG + chr2.3:64639649-64639668 MS.gene00786:CDS 40.0%
AGAATCAGAAACACAAGGCT+GGG + chr2.3:64639559-64639578 MS.gene00786:CDS 40.0%
AGTCCAGAATCAGAAACACA+AGG + chr2.3:64639554-64639573 MS.gene00786:CDS 40.0%
ATTACGTACCTCAGTAGTCT+TGG - chr2.3:64638703-64638722 None:intergenic 40.0%
GAATCACCACACTGAAAATG+AGG + chr2.3:64638976-64638995 MS.gene00786:CDS 40.0%
GAGATGCTAAGTCATGTTAC+CGG + chr2.3:64638908-64638927 MS.gene00786:CDS 40.0%
GGTTTACAACTTGCAAACAC+CGG + chr2.3:64638621-64638640 MS.gene00786:CDS 40.0%
TATAGATGCACTATGGCAGT+CGG + chr2.3:64639874-64639893 MS.gene00786:CDS 40.0%
TCTACCTTGTTCAACAAGCA+TGG + chr2.3:64640317-64640336 MS.gene00786:CDS 40.0%
TGATGAAATGGTGCATGTTG+AGG - chr2.3:64640429-64640448 None:intergenic 40.0%
TGCTAGATCAGAAGCTTCAA+TGG + chr2.3:64639676-64639695 MS.gene00786:CDS 40.0%
! AGAAGTGGAAGGCTTTTCAT+CGG - chr2.3:64638465-64638484 None:intergenic 40.0%
! AGAGAAGAAATCGACTTCAC+CGG - chr2.3:64638363-64638382 None:intergenic 40.0%
! TGTTGTTGTTGTTGTTGGCT+TGG - chr2.3:64640582-64640601 None:intergenic 40.0%
!! AGATAAGTGATGGATGCCAA+TGG + chr2.3:64639800-64639819 MS.gene00786:intron 40.0%
!! GTAGATGATGGCTGTTTTGA+AGG - chr2.3:64638248-64638267 None:intergenic 40.0%
AACCTTACCCGTAACACCAA+CGG + chr2.3:64638311-64638330 MS.gene00786:CDS 45.0%
AATTGCAAGTGGAGCTTCAG+CGG + chr2.3:64638858-64638877 MS.gene00786:CDS 45.0%
ACAGCCTTCTTTAGCTGACT+CGG + chr2.3:64640608-64640627 MS.gene00786:CDS 45.0%
ATCTCCTCCATTATTGGTGG+TGG + chr2.3:64640693-64640712 MS.gene00786:CDS 45.0%
CAGAATCAGAAACACAAGGC+TGG + chr2.3:64639558-64639577 MS.gene00786:CDS 45.0%
CCTCAGATGAGGAATAGCAA+TGG + chr2.3:64639512-64639531 MS.gene00786:CDS 45.0%
CTATAGTATGCTCGAGGACA+TGG - chr2.3:64639859-64639878 None:intergenic 45.0%
CTGCAAAGCCGTGTAATTAC+CGG - chr2.3:64638930-64638949 None:intergenic 45.0%
GAATCAGAAACACAAGGCTG+GGG + chr2.3:64639560-64639579 MS.gene00786:CDS 45.0%
GAGGAGAAAAACCAAGGTGT+TGG + chr2.3:64639377-64639396 MS.gene00786:CDS 45.0%
GATCAAACACACCTCAGATG+AGG + chr2.3:64639501-64639520 MS.gene00786:CDS 45.0%
GCAGCAAGCATGTTACTATC+AGG + chr2.3:64640240-64640259 MS.gene00786:CDS 45.0%
GCTATCTCCTCCATTATTGG+TGG + chr2.3:64640690-64640709 MS.gene00786:CDS 45.0%
GCTGCTATCTCCTCCATTAT+TGG + chr2.3:64640687-64640706 MS.gene00786:CDS 45.0%
GGATCAATGTCAAGTGCAGA+TGG + chr2.3:64640261-64640280 MS.gene00786:CDS 45.0%
GGATGCCAATGGAGGAAATA+TGG + chr2.3:64639811-64639830 MS.gene00786:CDS 45.0%
GTGCATCTATAGTATGCTCG+AGG - chr2.3:64639865-64639884 None:intergenic 45.0%
TAAACGTGCCAAGACTACTG+AGG + chr2.3:64638692-64638711 MS.gene00786:CDS 45.0%
TCAGCTTGCACAATTGCAAG+TGG + chr2.3:64638847-64638866 MS.gene00786:intron 45.0%
TGCCGAGGACAAAACAATCT+TGG + chr2.3:64640143-64640162 MS.gene00786:CDS 45.0%
! CAGCCTTGTGTTTCTGATTC+TGG - chr2.3:64639560-64639579 None:intergenic 45.0%
! CCATTGCTATTCCTCATCTG+AGG - chr2.3:64639515-64639534 None:intergenic 45.0%
! GTTGCCATGCTTGTTGAACA+AGG - chr2.3:64640324-64640343 None:intergenic 45.0%
!! CGACTTCACCGGTTATTTTC+CGG - chr2.3:64638352-64638371 None:intergenic 45.0%
!! GAGAAAAACCAAGGTGTTGG+TGG + chr2.3:64639380-64639399 MS.gene00786:CDS 45.0%
!! TAAGTGATGGATGCCAATGG+AGG + chr2.3:64639803-64639822 MS.gene00786:CDS 45.0%
AGCGGTGAAATTAGGATCGG+CGG - chr2.3:64640658-64640677 None:intergenic 50.0%
ATAGGTTCAACGTTGTGCCG+AGG + chr2.3:64640128-64640147 MS.gene00786:intron 50.0%
ATGGCCACCACCAATAATGG+AGG - chr2.3:64640700-64640719 None:intergenic 50.0%
CTGACCGAGTCAGCTAAAGA+AGG - chr2.3:64640615-64640634 None:intergenic 50.0%
GAGTCAGCTAAAGAAGGCTG+TGG - chr2.3:64640609-64640628 None:intergenic 50.0%
GCGAGAACAGCGGTGAAATT+AGG - chr2.3:64640666-64640685 None:intergenic 50.0%
GGCTTTGCAGATGCAACTTG+TGG + chr2.3:64638940-64638959 MS.gene00786:CDS 50.0%
GTGTTACGGGTAAGGTTGAC+AGG - chr2.3:64638308-64638327 None:intergenic 50.0%
TGCATGGCCACCACCAATAA+TGG - chr2.3:64640703-64640722 None:intergenic 50.0%
! TAACATGCTTGCTGCTGCTG+AGG - chr2.3:64640235-64640254 None:intergenic 50.0%
!! TTGTTGGCTTGGAGCTTGTG+TGG - chr2.3:64640571-64640590 None:intergenic 50.0%
ACCACCAGCAGCTATGGCAA+TGG + chr2.3:64640200-64640219 MS.gene00786:CDS 55.0%
CCATTGCTCCACCAACACCT+TGG - chr2.3:64639391-64639410 None:intergenic 55.0%
CGTAACACCAACGGCGAAGA+CGG + chr2.3:64638320-64638339 MS.gene00786:CDS 55.0%
GATAGCAGCTGCGAGAACAG+CGG - chr2.3:64640676-64640695 None:intergenic 55.0%
GATGCCATTGCCATAGCTGC+TGG - chr2.3:64640207-64640226 None:intergenic 55.0%
GGCGGTGACCGGAAAATAAC+CGG + chr2.3:64638341-64638360 MS.gene00786:CDS 55.0%
TCCACTACCACCAGCAGCTA+TGG + chr2.3:64640194-64640213 MS.gene00786:CDS 55.0%
!! CCAAGGTGTTGGTGGAGCAA+TGG + chr2.3:64639388-64639407 MS.gene00786:CDS 55.0%
!! CGTCTTCGCCGTTGGTGTTA+CGG - chr2.3:64638322-64638341 None:intergenic 55.0%
!! GTCTTCGCCGTTGGTGTTAC+GGG - chr2.3:64638321-64638340 None:intergenic 55.0%
!! TAGCTGCTGGTGGTAGTGGA+TGG - chr2.3:64640194-64640213 None:intergenic 55.0%
AACACCAACGGCGAAGACGG+CGG + chr2.3:64638323-64638342 MS.gene00786:CDS 60.0%
AGGATCGGCGGTGATAGCAG+CGG - chr2.3:64640646-64640665 None:intergenic 60.0%
GCCATAGCTGCTGGTGGTAG+TGG - chr2.3:64640198-64640217 None:intergenic 60.0%
GCCATTGCCATAGCTGCTGG+TGG - chr2.3:64640204-64640223 None:intergenic 60.0%
!! CGCCGTTGGTGTTACGGGTA+AGG - chr2.3:64638316-64638335 None:intergenic 60.0%
ATCGGCGGTGATAGCAGCGG+TGG - chr2.3:64640643-64640662 None:intergenic 65.0%
ACGGCGAAGACGGCGGTGAC+CGG + chr2.3:64638330-64638349 MS.gene00786:CDS 70.0%
GGCGGTGATAGCAGCGGTGG+CGG - chr2.3:64640640-64640659 None:intergenic 70.0%
GTCACCGCCGTCTTCGCCGT+TGG - chr2.3:64638330-64638349 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr2.3 gene 64638167 64640794 64638167 ID=MS.gene00786
chr2.3 mRNA 64638167 64640794 64638167 ID=MS.gene00786.t1;Parent=MS.gene00786
chr2.3 exon 64638167 64638499 64638167 ID=MS.gene00786.t1.exon1;Parent=MS.gene00786.t1
chr2.3 CDS 64638167 64638499 64638167 ID=cds.MS.gene00786.t1;Parent=MS.gene00786.t1
chr2.3 exon 64638618 64638713 64638618 ID=MS.gene00786.t1.exon2;Parent=MS.gene00786.t1
chr2.3 CDS 64638618 64638713 64638618 ID=cds.MS.gene00786.t1;Parent=MS.gene00786.t1
chr2.3 exon 64638851 64638997 64638851 ID=MS.gene00786.t1.exon3;Parent=MS.gene00786.t1
chr2.3 CDS 64638851 64638997 64638851 ID=cds.MS.gene00786.t1;Parent=MS.gene00786.t1
chr2.3 exon 64639359 64639697 64639359 ID=MS.gene00786.t1.exon4;Parent=MS.gene00786.t1
chr2.3 CDS 64639359 64639697 64639359 ID=cds.MS.gene00786.t1;Parent=MS.gene00786.t1
chr2.3 exon 64639802 64639915 64639802 ID=MS.gene00786.t1.exon5;Parent=MS.gene00786.t1
chr2.3 CDS 64639802 64639915 64639802 ID=cds.MS.gene00786.t1;Parent=MS.gene00786.t1
chr2.3 exon 64640132 64640794 64640132 ID=MS.gene00786.t1.exon6;Parent=MS.gene00786.t1
chr2.3 CDS 64640132 64640794 64640132 ID=cds.MS.gene00786.t1;Parent=MS.gene00786.t1
Gene Sequence

>MS.gene00786

ATGGACAAAGCATGGGGTCTAGCTCTTGATACTTCTTCATCTTCTCCAATTCCAATATCTCACTCTCACCCTTTTTTACCTTCAAAACAGCCATCATCTACTTATACCAACGATAGAATGTTTCCTATTTTAGGATTTCCTGTCAACCTTACCCGTAACACCAACGGCGAAGACGGCGGTGACCGGAAAATAACCGGTGAAGTCGATTTCTTCTCTGAAAGAAACAAACTATCACCTTCAAATGAACACAACCAACATGTTAAATCCAATATCATCAAAAAGGAGATTGTTTCAACCGATGAAAAGCCTTCCACTTCTAATATCCATGTTAATGTAAGCTTCCTTATTAATTTCTCATATTTCTTTCCAAAATTCAATGATAAAATATTTCTTATAAATAATAACATATGTACTAATTTAATTTTTTTTTTTTTTTGTTCAAATATTATAGACTGGTTTACAACTTGCAAACACCGGAAGTGATCAATCTGTAGTAGATGATGGAGTTACATCTGATGCTGAAAATAAACGTGCCAAGACTACTGAGGTACGTAATTTAATTTAGTGTATGTTTGATATCACGGTTTGTTTATCAGAGAATTACTGTGTTATATATGTAACTAGTAATTTTATGTAGTCTTTACCAGATGAAATTGATATATAAACTTGTTTAATTTGATTCAGCTTGCACAATTGCAAGTGGAGCTTCAGCGGATGAATTCAGAGAACAAAAAGCTGAAAGAGATGCTAAGTCATGTTACCGGTAATTACACGGCTTTGCAGATGCAACTTGTGGCATTAATGCAAAAGAATCACCACACTGAAAATGAGGTAATTATCAATTGCTAGTTTCTTTCTATTTTCATTATTCTTATGTATGTTCATGACATGTCAATTTAGTGGTACAAGTTTGACTTTGTAAACTCAAAATATGGAATTCAAATCTTAAATGGAAAAATTGTACAATTGTCATAGTTGTTAGTCATACTTCTTTGACATAAATGACCTGCATATGAGATGTTAGTATACTAAAAGTAGAAATTAAATATTGAAAATTATGTTAATTTATTTCTCAAAATTGTGAAAACTAATTTTTCTCAACGTATACTTGCTATTTTTAGAATCTTAGTAAGCCCTTATATTATATGCCAGATTGGTAACATGTTAATAAATTAATATTGTTAAAATTCAGGTTGTTAATGCAAAAACTGAGGAGAAAAACCAAGGTGTTGGTGGAGCAATGGTACCAAGACAATTTCTTGAGATAGGTACTACTAATGGAACAGCAGAAGTTGAAGATCAAGTATCAAACTCATCATCTGATGAAAGAACAAGATCAAACACACCTCAGATGAGGAATAGCAATGGTAAAACTGGTAGGGAAGACAGTCCAGAATCAGAAACACAAGGCTGGGGACCAAACAAGTCTCAGAAAATATTGAACTCTTCCAATGTTGCAGATCAAGCAAATACAGAAGCTACAATGAGAAAAGCTCGTGTCTCGGTTCGTGCTAGATCAGAAGCTTCAATGGTATGCATTCATTAACTACTAATTAAATCACAATTGATTAAGGCACTTGAATAATTTCTTGATTAGTTTTCTAACTGAATTTTGTGATGGATATATAATTGCAGATAAGTGATGGATGCCAATGGAGGAAATATGGACAAAAAATGGCTAAAGGAAATCCATGTCCTCGAGCATACTATAGATGCACTATGGCAGTCGGTTGTCCAGTTCGCAAACAAGTGAGTTTTCTTTTTACTAAAGAAATATCGTGTCTAATATGAACCACTAAAAAAATAGTCCAAATGTCGCTTTTTCTAAATTTAGTGACGAAATTAGAGATAGGTCGCTTTTTCTGTATAAGTTTGTATAGATGATTTAACTTACTATATTAGAAGTAGTATTAGTATTTTTGTATTGTAACTTAGAGCTAATTATTGATGTTTTTTTGTTAATAGGTTCAACGTTGTGCCGAGGACAAAACAATCTTGGTAACAACATATGAAGGAACACATAACCATCCACTACCACCAGCAGCTATGGCAATGGCATCAACAACCTCAGCAGCAGCAAGCATGTTACTATCAGGATCAATGTCAAGTGCAGATGGAATAATGACACCAAATTTATTAGCAAGAGCTATTCTACCTTGTTCAACAAGCATGGCAACACTTTCAGCTTCAGCACCATTCCCTACTGTTACATTAGATCTCACACAAAATTCAAACCCAAATCCATTGCAATTTCAAAGACCTCAACATGCACCATTTCATCAAGTACCTAGTTTCTTTCAAGGACAGAATCAGAATTTTGCACAAGCAGCAGCATCATTTTATAATCAGTCAAAATTTTCTGGTCTTCAATTGTCTCAAGAAGTTGGTTCTTCTCATTTAACCACACAAGCTCCAAGCCAACAACAACAACAACAACAACCACAGCCTTCTTTAGCTGACTCGGTCAGCGCCGCCACCGCTGCTATCACCGCCGATCCTAATTTCACCGCTGTTCTCGCAGCTGCTATCTCCTCCATTATTGGTGGTGGCCATGCAAACAATAGCAACAACAGCAACAACAACAACAGCAATAGCAGAAATACAATTAGCAACTTTTCAGGAAACTAA
Protein sequence

>MS.gene00786.t1

MDKAWGLALDTSSSSPIPISHSHPFLPSKQPSSTYTNDRMFPILGFPVNLTRNTNGEDGGDRKITGEVDFFSERNKLSPSNEHNQHVKSNIIKKEIVSTDEKPSTSNIHVNTGLQLANTGSDQSVVDDGVTSDAENKRAKTTELAQLQVELQRMNSENKKLKEMLSHVTGNYTALQMQLVALMQKNHHTENEVVNAKTEEKNQGVGGAMVPRQFLEIGTTNGTAEVEDQVSNSSSDERTRSNTPQMRNSNGKTGREDSPESETQGWGPNKSQKILNSSNVADQANTEATMRKARVSVRARSEASMISDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDKTILVTTYEGTHNHPLPPAAMAMASTTSAAASMLLSGSMSSADGIMTPNLLARAILPCSTSMATLSASAPFPTVTLDLTQNSNPNPLQFQRPQHAPFHQVPSFFQGQNQNFAQAAASFYNQSKFSGLQLSQEVGSSHLTTQAPSQQQQQQQPQPSLADSVSAATAAITADPNFTAVLAAAISSIIGGGHANNSNNSNNNNSNSRNTISNFSGN