AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene008093

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene008093.t1 MTR_3g070030 80.114 352 36 3 1 318 1 352 0.0 566
MS.gene008093.t1 MTR_3g070040 75.731 342 41 6 12 318 1 335 1.35e-180 502
MS.gene008093.t1 MTR_7g011130 64.628 376 51 6 1 318 1 352 2.52e-161 454
MS.gene008093.t1 MTR_7g011120 68.060 335 54 6 12 318 1 310 4.66e-154 434
MS.gene008093.t1 MTR_6g012670 48.598 321 135 7 14 318 15 321 2.08e-91 275
MS.gene008093.t1 MTR_4g108760 43.539 356 144 8 13 318 11 359 2.45e-83 256
MS.gene008093.t1 MTR_3g435150 55.046 218 94 2 5 222 2 215 4.05e-77 238
MS.gene008093.t1 MTR_2g078700 68.354 158 47 2 19 174 23 179 1.95e-73 231
MS.gene008093.t1 MTR_6g032770 57.592 191 78 2 14 202 13 202 9.70e-72 227
MS.gene008093.t1 MTR_7g085260 60.227 176 65 3 5 176 3 177 1.17e-69 221
MS.gene008093.t1 MTR_6g084430 57.542 179 71 2 19 197 5 178 1.31e-67 214
MS.gene008093.t1 MTR_1g008740 55.670 194 78 4 19 209 13 201 1.96e-67 214
MS.gene008093.t1 MTR_1g008740 55.670 194 78 4 19 209 27 215 2.54e-67 215
MS.gene008093.t1 MTR_3g109340 52.308 195 78 4 19 202 22 212 2.23e-65 210
MS.gene008093.t1 MTR_3g109340 52.308 195 77 4 19 202 22 211 4.17e-65 209
MS.gene008093.t1 MTR_3g116070 68.217 129 38 2 19 144 23 151 1.84e-59 194
MS.gene008093.t1 MTR_2g064470 54.140 157 66 3 16 171 8 159 6.49e-55 181
MS.gene008093.t1 MTR_5g041940 42.793 222 108 3 17 237 1 204 9.45e-55 179
MS.gene008093.t1 MTR_5g012080 46.919 211 94 6 20 218 8 212 1.10e-54 182
MS.gene008093.t1 MTR_4g101680 54.140 157 58 3 20 170 8 156 8.90e-54 180
MS.gene008093.t1 MTR_8g024480 50.276 181 80 3 14 184 10 190 1.58e-53 181
MS.gene008093.t1 MTR_8g059170 50.311 161 79 1 16 176 11 170 2.05e-53 178
MS.gene008093.t1 MTR_4g035590 57.233 159 59 2 20 175 9 161 2.31e-53 178
MS.gene008093.t1 MTR_4g081870 50.000 176 82 3 18 188 8 182 2.52e-53 176
MS.gene008093.t1 MTR_3g093050 44.934 227 102 6 19 230 22 240 1.13e-52 182
MS.gene008093.t1 MTR_3g093050 44.934 227 102 6 19 230 22 240 1.64e-52 182
MS.gene008093.t1 MTR_4g036030 44.231 208 99 4 20 222 8 203 1.97e-52 176
MS.gene008093.t1 MTR_3g093040 44.498 209 106 4 17 223 106 306 4.32e-52 174
MS.gene008093.t1 MTR_1g069805 44.865 185 82 4 19 201 10 176 8.46e-52 172
MS.gene008093.t1 MTR_7g085220 38.258 264 139 4 12 251 1 264 2.24e-51 173
MS.gene008093.t1 MTR_8g094580 48.276 174 82 3 17 186 5 174 5.05e-51 170
MS.gene008093.t1 MTR_2g079990 49.068 161 79 1 16 176 13 170 8.80e-51 172
MS.gene008093.t1 MTR_2g062730 40.441 272 124 11 16 263 7 264 9.26e-51 171
MS.gene008093.t1 MTR_5g069030 48.634 183 87 3 18 198 24 201 9.76e-51 177
MS.gene008093.t1 MTR_3g088110 49.032 155 78 1 16 170 4 157 1.08e-50 169
MS.gene008093.t1 MTR_1g096430 50.955 157 63 3 20 170 8 156 2.06e-50 170
MS.gene008093.t1 MTR_5g021710 42.574 202 99 4 12 204 1 194 1.12e-49 169
MS.gene008093.t1 MTR_7g100990 50.307 163 78 2 11 170 3 165 1.43e-49 168
MS.gene008093.t1 MTR_8g076110 51.299 154 67 3 20 170 7 155 2.37e-49 167
MS.gene008093.t1 MTR_6g477900 52.229 157 70 2 17 171 4 157 3.18e-49 164
MS.gene008093.t1 MTR_2g080010 46.199 171 82 2 15 175 11 181 4.44e-49 167
MS.gene008093.t1 MTR_2g064090 50.955 157 71 3 17 170 4 157 9.63e-49 166
MS.gene008093.t1 MTR_7g097090 48.684 152 69 2 19 168 10 154 1.81e-48 164
MS.gene008093.t1 MTR_3g096920 48.387 155 79 1 16 170 4 157 2.65e-48 164
MS.gene008093.t1 MTR_2g079990 43.548 186 80 2 16 176 13 198 3.35e-48 166
MS.gene008093.t1 MTR_4g089135 45.455 176 74 3 19 172 15 190 7.75e-48 164
MS.gene008093.t1 MTR_5g076850 47.429 175 87 2 17 189 4 175 8.17e-48 170
MS.gene008093.t1 MTR_7g005280 50.299 167 71 5 13 176 9 166 1.30e-47 160
MS.gene008093.t1 MTR_3g064580 51.282 156 72 2 17 170 4 157 1.72e-47 169
MS.gene008093.t1 MTR_2157s0010 48.810 168 77 3 12 170 1 168 4.15e-47 160
MS.gene008093.t1 MTR_2g093810 38.589 241 123 6 19 244 14 244 7.82e-47 160
MS.gene008093.t1 MTR_8g063550 46.154 169 85 3 18 184 5 169 1.66e-46 160
MS.gene008093.t1 MTR_8g063550 46.154 169 85 3 18 184 5 169 5.48e-46 161
MS.gene008093.t1 MTR_8g063550 46.199 171 82 4 18 184 5 169 7.80e-46 160
MS.gene008093.t1 MTR_8g467490 46.429 168 77 4 15 172 11 175 2.88e-45 158
MS.gene008093.t1 MTR_3g096920 53.846 130 59 1 16 145 4 132 5.21e-45 156
MS.gene008093.t1 MTR_3g096140 45.143 175 89 4 12 184 1 170 6.06e-45 154
MS.gene008093.t1 MTR_1g090723 44.974 189 95 5 22 206 11 194 1.57e-44 160
MS.gene008093.t1 MTR_1g090723 44.974 189 96 5 22 206 11 195 1.98e-44 160
MS.gene008093.t1 MTR_1g090723 44.974 189 95 5 22 206 11 194 2.38e-44 160
MS.gene008093.t1 MTR_6g011860 45.963 161 76 3 21 172 17 175 3.20e-44 155
MS.gene008093.t1 MTR_3g096140 45.143 175 89 4 12 184 1 170 4.21e-44 154
MS.gene008093.t1 MTR_8g093580 45.029 171 84 4 18 184 5 169 1.11e-43 156
MS.gene008093.t1 MTR_5g040420 45.509 167 79 4 15 172 11 174 1.15e-43 154
MS.gene008093.t1 MTR_0036s0150 36.466 266 146 9 22 278 8 259 2.54e-43 156
MS.gene008093.t1 MTR_4g098630 33.003 303 186 6 15 303 2 301 6.19e-43 150
MS.gene008093.t1 MTR_5g014300 46.341 164 73 3 17 171 4 161 1.60e-42 150
MS.gene008093.t1 MTR_1g097300 48.193 166 76 4 22 183 22 181 2.17e-41 151
MS.gene008093.t1 MTR_2g068920 41.667 192 95 6 1 176 1 191 5.57e-41 144
MS.gene008093.t1 MTR_2g068880 42.408 191 86 6 1 171 1 187 1.06e-40 144
MS.gene008093.t1 MTR_5g090970 41.860 172 89 3 8 170 9 178 1.35e-40 144
MS.gene008093.t1 MTR_4g134460 46.358 151 75 2 21 170 56 201 1.98e-40 146
MS.gene008093.t1 MTR_2g086880 52.800 125 57 2 19 142 19 142 9.41e-40 146
MS.gene008093.t1 MTR_2g086880 52.800 125 57 2 19 142 19 142 1.06e-39 147
MS.gene008093.t1 MTR_5g090970 41.860 172 88 4 8 170 9 177 8.83e-39 139
MS.gene008093.t1 MTR_1g090720 45.294 170 87 3 21 185 44 212 2.24e-38 142
MS.gene008093.t1 MTR_3g096140 45.033 151 77 3 36 184 3 149 3.76e-37 135
MS.gene008093.t1 MTR_8g023840 53.435 131 55 5 20 145 12 141 1.38e-36 135
MS.gene008093.t1 MTR_8g099750 41.250 160 88 3 12 167 7 164 2.65e-36 130
MS.gene008093.t1 MTR_4g075980 39.227 181 95 4 1 178 1 169 4.01e-36 132
MS.gene008093.t1 MTR_8g023860 46.405 153 68 7 20 167 13 156 1.44e-34 130
MS.gene008093.t1 MTR_3g098810 41.566 166 88 4 12 170 7 170 1.76e-34 126
MS.gene008093.t1 MTR_8g094580 50.806 124 53 3 67 186 1 120 5.53e-33 122
MS.gene008093.t1 MTR_3g098810 44.203 138 71 2 12 145 7 142 1.47e-32 119
MS.gene008093.t1 MTR_4g052620 41.401 157 84 4 19 168 5 160 3.90e-32 120
MS.gene008093.t1 MTR_2g086690 39.744 156 87 4 20 168 5 160 4.23e-30 115
MS.gene008093.t1 MTR_8g023930 38.235 204 100 9 19 215 24 208 2.22e-29 117
MS.gene008093.t1 MTR_8g023900 42.308 156 74 7 21 170 195 340 3.55e-29 116
MS.gene008093.t1 MTR_8g023900 41.250 160 76 7 19 170 12 161 3.55e-27 110
MS.gene008093.t1 MTR_7g105170 38.462 169 95 6 19 178 4 172 8.96e-29 111
MS.gene008093.t1 MTR_8g023880 45.833 144 56 7 19 143 7 147 9.48e-27 106
MS.gene008093.t1 MTR_4g094302 32.447 188 114 3 19 201 11 190 2.17e-25 100
MS.gene008093.t1 MTR_7g070140 54.667 75 32 1 72 144 17 91 1.50e-23 94.4
MS.gene008093.t1 MTR_4g094302 38.281 128 69 2 19 144 11 130 3.31e-23 94.0
MS.gene008093.t1 MTR_3g096400 36.047 172 83 7 15 171 3 162 5.18e-21 89.7
MS.gene008093.t1 MTR_8g093790 37.888 161 74 6 17 177 8 142 3.96e-20 86.7
MS.gene008093.t1 MTR_7g083360 34.328 134 82 5 12 142 3 133 1.29e-16 76.3
MS.gene008093.t1 MTR_7g083330 31.884 138 88 5 8 142 7 141 2.00e-16 76.6
MS.gene008093.t1 MTR_2g014680 32.716 162 92 4 2 147 36 196 5.52e-16 77.4
MS.gene008093.t1 MTR_7g083370 31.387 137 88 4 14 147 5 138 9.24e-15 70.9
MS.gene008093.t1 MTR_2g090735 34.028 144 74 5 19 144 49 189 8.88e-14 70.9
MS.gene008093.t1 MTR_8g102240 31.818 176 83 8 19 168 47 211 2.98e-12 67.4
MS.gene008093.t1 MTR_8g102240 31.818 176 83 8 19 168 47 211 2.99e-12 67.4
MS.gene008093.t1 MTR_7g070150 46.032 63 22 2 111 170 4 57 1.25e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene008093.t1 AT5G61430 45.833 336 143 8 13 318 10 336 7.66e-89 269
MS.gene008093.t1 AT5G07680 45.593 329 152 7 10 318 8 329 9.87e-85 258
MS.gene008093.t1 AT5G07680 46.729 321 142 8 19 318 3 315 2.17e-83 254
MS.gene008093.t1 AT3G29035 48.352 273 121 4 3 260 8 275 1.51e-74 232
MS.gene008093.t1 AT5G39610 66.061 165 55 1 13 177 14 177 1.31e-73 228
MS.gene008093.t1 AT5G18270 65.409 159 53 2 15 172 17 174 1.69e-71 225
MS.gene008093.t1 AT5G18270 65.409 159 53 2 15 172 17 174 2.19e-71 224
MS.gene008093.t1 AT3G04060 49.194 248 116 6 7 246 8 253 1.67e-70 222
MS.gene008093.t1 AT5G53950 68.182 154 46 2 19 170 17 169 2.98e-70 223
MS.gene008093.t1 AT2G24430 60.588 170 61 2 9 176 6 171 1.98e-68 216
MS.gene008093.t1 AT2G24430 60.588 170 61 2 9 176 6 171 1.98e-68 216
MS.gene008093.t1 AT3G18400 55.249 181 77 1 19 199 5 181 7.53e-68 215
MS.gene008093.t1 AT3G15170 62.963 162 56 3 11 170 13 172 5.13e-66 210
MS.gene008093.t1 AT1G76420 61.688 154 53 2 19 170 22 171 3.65e-65 208
MS.gene008093.t1 AT5G61430 43.617 282 120 8 67 318 1 273 3.79e-64 204
MS.gene008093.t1 AT3G12977 50.000 160 78 1 19 178 18 175 3.81e-57 186
MS.gene008093.t1 AT1G56010 42.986 221 111 5 1 213 1 214 1.07e-56 186
MS.gene008093.t1 AT2G46770 42.791 215 103 4 14 214 11 219 1.43e-54 182
MS.gene008093.t1 AT4G10350 56.604 159 63 2 20 175 10 165 6.23e-54 179
MS.gene008093.t1 AT4G35580 48.108 185 90 3 19 200 9 190 5.45e-53 181
MS.gene008093.t1 AT1G12260 53.896 154 63 2 20 170 8 156 7.61e-53 177
MS.gene008093.t1 AT4G35580 48.108 185 90 3 19 200 9 190 9.03e-53 181
MS.gene008093.t1 AT4G35580 48.108 185 90 3 19 200 9 190 9.19e-53 181
MS.gene008093.t1 AT3G61910 45.729 199 92 5 14 199 6 201 9.92e-53 176
MS.gene008093.t1 AT1G12260 53.896 154 63 2 20 170 8 156 1.45e-52 177
MS.gene008093.t1 AT1G62700 52.830 159 61 3 18 170 6 156 4.60e-52 176
MS.gene008093.t1 AT1G62700 52.830 159 61 3 18 170 6 156 4.60e-52 176
MS.gene008093.t1 AT1G33280 54.717 159 63 3 20 175 9 161 4.95e-52 174
MS.gene008093.t1 AT4G27410 51.266 158 68 3 16 170 11 162 1.12e-51 172
MS.gene008093.t1 AT1G33060 52.830 159 68 3 19 173 24 179 1.22e-51 180
MS.gene008093.t1 AT1G33060 52.830 159 68 3 19 173 24 179 1.36e-51 180
MS.gene008093.t1 AT1G77450 49.351 154 77 1 17 170 8 160 4.15e-51 170
MS.gene008093.t1 AT1G32770 45.933 209 98 6 14 211 11 215 1.19e-50 172
MS.gene008093.t1 AT5G66300 50.968 155 69 2 19 170 12 162 1.48e-50 169
MS.gene008093.t1 AT3G04070 46.193 197 95 4 13 200 4 198 1.74e-50 171
MS.gene008093.t1 AT5G08790 45.641 195 93 5 16 201 4 194 2.81e-50 168
MS.gene008093.t1 AT3G15500 49.068 161 79 2 16 176 11 168 6.94e-50 168
MS.gene008093.t1 AT1G01720 48.734 158 79 2 14 170 2 158 9.74e-50 167
MS.gene008093.t1 AT5G62380 52.258 155 66 3 19 170 7 156 1.05e-49 169
MS.gene008093.t1 AT5G62380 52.258 155 66 3 19 170 7 156 1.05e-49 169
MS.gene008093.t1 AT1G71930 49.032 155 71 3 19 170 9 158 1.13e-49 168
MS.gene008093.t1 AT1G71930 49.032 155 71 3 19 170 9 158 1.13e-49 168
MS.gene008093.t1 AT1G52890 49.689 161 78 2 16 176 11 168 1.32e-49 168
MS.gene008093.t1 AT2G18060 48.485 165 75 3 15 175 5 163 1.94e-49 169
MS.gene008093.t1 AT2G18060 48.485 165 75 3 15 175 5 163 1.94e-49 169
MS.gene008093.t1 AT4G36160 49.689 161 71 3 14 170 5 159 2.74e-49 169
MS.gene008093.t1 AT4G36160 49.689 161 71 3 14 170 5 159 2.74e-49 169
MS.gene008093.t1 AT4G36160 49.689 161 71 3 14 170 9 163 3.04e-49 169
MS.gene008093.t1 AT1G65910 45.652 184 93 3 17 198 4 182 3.82e-49 173
MS.gene008093.t1 AT3G03200 54.140 157 66 3 17 170 4 157 4.90e-49 170
MS.gene008093.t1 AT3G17730 47.619 168 83 2 17 182 4 168 5.04e-49 164
MS.gene008093.t1 AT5G63790 50.909 165 71 4 11 170 43 202 5.85e-49 166
MS.gene008093.t1 AT5G63790 50.909 165 71 4 11 170 53 212 6.65e-49 166
MS.gene008093.t1 AT1G61110 45.355 183 80 3 5 172 2 179 8.62e-49 166
MS.gene008093.t1 AT1G69490 50.000 162 78 2 19 178 9 169 1.39e-48 164
MS.gene008093.t1 AT5G17260 52.866 157 68 3 17 170 4 157 3.23e-48 168
MS.gene008093.t1 AT3G04070 41.784 213 97 4 13 200 4 214 3.58e-48 165
MS.gene008093.t1 AT2G33480 51.592 157 64 3 17 170 13 160 5.29e-48 162
MS.gene008093.t1 AT2G33480 51.592 157 62 3 17 170 13 158 2.86e-47 160
MS.gene008093.t1 AT4G27410 46.286 175 68 4 16 170 11 179 3.38e-47 161
MS.gene008093.t1 AT3G15510 44.970 169 83 2 23 181 21 189 3.56e-47 162
MS.gene008093.t1 AT5G24590 35.034 294 161 9 19 291 13 297 3.82e-47 165
MS.gene008093.t1 AT1G54330 51.592 157 68 2 17 171 4 154 4.31e-47 160
MS.gene008093.t1 AT4G28530 45.029 171 69 4 18 170 9 172 6.84e-47 162
MS.gene008093.t1 AT1G79580 50.932 161 69 4 16 172 14 168 9.05e-47 162
MS.gene008093.t1 AT1G79580 50.932 161 69 4 16 172 14 168 9.05e-47 162
MS.gene008093.t1 AT1G79580 50.932 161 69 4 16 172 14 168 9.05e-47 162
MS.gene008093.t1 AT1G79580 50.932 161 69 4 16 172 14 168 9.05e-47 162
MS.gene008093.t1 AT1G79580 50.932 161 69 4 16 172 14 168 9.05e-47 162
MS.gene008093.t1 AT5G04410 48.780 164 78 3 22 183 12 171 9.89e-47 166
MS.gene008093.t1 AT3G49530 46.199 171 82 4 4 171 2 165 1.10e-46 162
MS.gene008093.t1 AT1G26870 46.154 182 83 5 1 172 1 177 1.46e-46 162
MS.gene008093.t1 AT3G10500 47.590 166 77 4 22 183 12 171 1.50e-46 165
MS.gene008093.t1 AT5G13180 46.707 167 80 3 12 176 7 166 1.53e-46 158
MS.gene008093.t1 AT3G49530 46.199 171 82 4 4 171 2 165 2.86e-46 163
MS.gene008093.t1 AT3G10480 50.000 168 74 4 22 185 30 191 4.31e-46 162
MS.gene008093.t1 AT3G10480 49.704 169 74 4 22 185 30 192 1.73e-45 160
MS.gene008093.t1 AT2G27300 56.154 130 53 4 19 146 15 142 2.73e-45 157
MS.gene008093.t1 AT3G10490 47.929 169 77 4 22 185 30 192 3.35e-45 154
MS.gene008093.t1 AT5G46590 47.436 156 77 3 19 171 6 159 3.88e-44 153
MS.gene008093.t1 AT2G43000 38.249 217 110 5 1 217 1 193 7.89e-44 151
MS.gene008093.t1 AT3G10490 47.929 169 77 4 22 185 30 192 1.07e-43 155
MS.gene008093.t1 AT5G46590 51.515 132 61 2 19 147 6 137 1.15e-43 151
MS.gene008093.t1 AT5G09330 42.941 170 91 3 16 183 3 168 1.37e-43 156
MS.gene008093.t1 AT5G09330 42.941 170 91 3 16 183 3 168 1.37e-43 156
MS.gene008093.t1 AT5G09330 42.941 170 91 3 16 183 3 168 1.37e-43 156
MS.gene008093.t1 AT5G09330 42.941 170 91 3 16 183 3 168 1.37e-43 156
MS.gene008093.t1 AT5G09330 42.941 170 91 3 16 183 3 168 1.37e-43 156
MS.gene008093.t1 AT5G39820 43.017 179 81 4 15 173 17 194 8.28e-43 150
MS.gene008093.t1 AT5G64060 42.353 170 92 3 16 183 3 168 1.83e-42 150
MS.gene008093.t1 AT1G52880 45.912 159 77 2 23 172 21 179 4.42e-41 145
MS.gene008093.t1 AT4G17980 45.860 157 80 3 19 171 6 161 8.01e-41 143
MS.gene008093.t1 AT2G02450 46.000 150 75 2 22 170 54 198 8.20e-41 146
MS.gene008093.t1 AT4G17980 46.203 158 78 4 19 171 6 161 1.09e-40 144
MS.gene008093.t1 AT2G02450 46.000 150 75 2 22 170 54 198 1.11e-40 147
MS.gene008093.t1 AT3G10480 43.069 202 71 5 22 185 30 225 1.05e-39 146
MS.gene008093.t1 AT5G22290 47.727 132 67 2 19 149 22 152 2.21e-39 142
MS.gene008093.t1 AT3G44290 48.485 132 66 2 19 149 15 145 2.30e-39 138
MS.gene008093.t1 AT1G34190 44.379 169 87 4 18 183 14 178 8.42e-39 144
MS.gene008093.t1 AT1G32510 43.827 162 80 3 19 171 6 165 1.45e-38 138
MS.gene008093.t1 AT1G34180 43.787 169 88 4 18 183 14 178 2.00e-38 141
MS.gene008093.t1 AT3G44290 48.485 132 66 2 19 149 15 145 2.99e-38 139
MS.gene008093.t1 AT3G12977 54.867 113 49 1 66 178 12 122 3.14e-38 135
MS.gene008093.t1 AT1G34180 44.444 171 84 5 18 183 14 178 5.87e-38 142
MS.gene008093.t1 AT2G17040 40.606 165 86 3 17 178 5 160 1.40e-37 135
MS.gene008093.t1 AT1G56010 46.753 154 68 4 67 213 1 147 1.16e-36 132
MS.gene008093.t1 AT1G34180 40.331 181 89 4 18 183 14 190 2.87e-36 135
MS.gene008093.t1 AT3G12910 41.011 178 89 6 13 176 16 191 4.50e-36 132
MS.gene008093.t1 AT1G34180 40.984 183 85 5 18 183 14 190 8.53e-36 136
MS.gene008093.t1 AT4G10350 57.391 115 43 2 64 175 7 118 3.65e-35 129
MS.gene008093.t1 AT1G32870 44.643 168 79 5 22 183 13 172 1.11e-34 132
MS.gene008093.t1 AT1G32870 44.643 168 79 5 22 183 13 172 1.14e-34 132
MS.gene008093.t1 AT1G32870 44.643 168 79 5 22 183 49 208 1.49e-34 132
MS.gene008093.t1 AT5G04395 43.448 145 66 2 19 147 28 172 4.82e-32 118
MS.gene008093.t1 AT2G33480 55.882 102 36 2 72 170 8 103 7.36e-32 118
MS.gene008093.t1 AT4G28530 42.424 132 58 3 18 131 9 140 1.57e-28 112
MS.gene008093.t1 AT4G01550 45.185 135 68 4 17 145 2 136 7.48e-28 112
MS.gene008093.t1 AT5G22380 35.028 177 103 5 22 189 8 181 4.09e-27 106
MS.gene008093.t1 AT4G01520 41.176 136 73 5 17 145 2 137 1.37e-26 107
MS.gene008093.t1 AT1G02230 35.266 207 109 8 20 219 4 192 1.46e-26 107
MS.gene008093.t1 AT3G04420 40.945 127 71 2 20 142 4 130 4.60e-26 105
MS.gene008093.t1 AT3G04420 40.945 127 71 2 20 142 4 130 9.56e-26 105
MS.gene008093.t1 AT4G01540 43.182 132 66 6 22 145 7 137 1.18e-25 105
MS.gene008093.t1 AT3G44350 31.933 238 147 7 21 250 7 237 1.51e-25 102
MS.gene008093.t1 AT4G01540 43.182 132 66 6 22 145 7 137 2.22e-25 105
MS.gene008093.t1 AT4G01540 43.182 132 66 6 22 145 7 137 2.35e-25 105
MS.gene008093.t1 AT4G01540 43.182 132 66 6 22 145 7 137 2.88e-25 105
MS.gene008093.t1 AT3G44350 39.535 129 72 3 21 143 7 135 1.41e-24 97.8
MS.gene008093.t1 AT3G10490 53.608 97 36 3 92 185 2 92 1.61e-24 102
MS.gene008093.t1 AT3G10490 53.608 97 36 3 92 185 2 92 1.61e-24 102
MS.gene008093.t1 AT1G02220 38.583 127 71 3 20 142 4 127 1.95e-22 97.1
MS.gene008093.t1 AT1G02250 39.231 130 69 4 20 142 4 130 3.21e-22 95.9
MS.gene008093.t1 AT2G18060 52.500 80 31 2 97 175 2 75 1.85e-20 89.7
MS.gene008093.t1 AT2G43000 37.681 138 63 4 80 217 1 115 4.16e-20 87.0
MS.gene008093.t1 AT5G64530 31.792 173 92 5 19 178 3 162 9.81e-20 85.5
MS.gene008093.t1 AT5G64530 35.659 129 69 3 19 145 3 119 4.00e-19 83.2
MS.gene008093.t1 AT5G14000 32.370 173 106 4 14 183 10 174 1.61e-18 82.8
MS.gene008093.t1 AT1G01010 35.616 146 74 6 21 152 5 144 2.09e-18 85.5
MS.gene008093.t1 AT5G14000 34.815 135 84 2 14 146 10 142 6.36e-18 79.7
MS.gene008093.t1 AT3G56530 34.091 132 82 3 15 142 48 178 3.19e-17 81.3
MS.gene008093.t1 AT5G50820 32.847 137 80 4 12 144 10 138 4.85e-16 75.5
MS.gene008093.t1 AT5G22290 57.692 52 22 0 98 149 2 53 5.13e-16 76.6
MS.gene008093.t1 AT3G04430 36.364 132 70 4 25 143 6 136 9.45e-16 75.1
MS.gene008093.t1 AT3G55210 31.429 140 82 3 19 144 11 150 1.13e-13 70.5
MS.gene008093.t1 AT5G56620 33.125 160 75 6 17 147 41 197 1.05e-12 68.6
MS.gene008093.t1 AT5G56620 33.125 160 75 6 17 147 41 197 1.19e-12 68.6
MS.gene008093.t1 AT5G56620 32.919 161 74 6 17 147 41 197 1.42e-12 68.2
MS.gene008093.t1 AT4G29230 32.402 179 83 9 17 168 46 213 2.54e-12 67.8
MS.gene008093.t1 AT4G29230 32.402 179 83 9 17 168 45 212 2.78e-12 67.8
MS.gene008093.t1 AT4G29230 32.402 179 83 9 17 168 46 213 6.68e-12 66.2

Find 71 sgRNAs with CRISPR-Local

Find 149 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCAAGGGAAATGCATTAAT+TGG 0.121823 3.3:-61303367 MS.gene008093:CDS
TTATTCAGAGCTGGCTAAAA+TGG 0.240651 3.3:-61303506 MS.gene008093:intron
AAATGAAAAGGTCAAATTTC+CGG 0.296027 3.3:-61304507 MS.gene008093:CDS
GGATAATTGTGGAAAGAAAA+TGG 0.302070 3.3:-61302575 MS.gene008093:CDS
AGAGATTCATTAGTATTTGA+TGG 0.305472 3.3:+61302511 None:intergenic
GATATCTCATCTGTGGTATA+TGG 0.312060 3.3:-61302238 MS.gene008093:CDS
AAAACTCTTGGTTTAGGCTT+TGG 0.320721 3.3:+61302284 None:intergenic
CAAAAGAAAACTCTTGGTTT+AGG 0.327229 3.3:+61302278 None:intergenic
TAGTAGCTCTATTGGTCCTT+TGG 0.349158 3.3:+61303431 None:intergenic
TGATTTCTCTTCAAAACAAA+TGG 0.368321 3.3:-61302449 MS.gene008093:CDS
TATTGGTCCTTTGGCCAGTT+GGG 0.376646 3.3:+61303440 None:intergenic
GGCATGTTTCAAAGGTGGTC+TGG 0.377514 3.3:-61302211 MS.gene008093:CDS
CAAGAATTGTCATCAGCTTC+AGG 0.379981 3.3:-61302184 MS.gene008093:CDS
CTAAAATGGGAGAAACAAAA+TGG 0.380978 3.3:-61303492 MS.gene008093:CDS
GAGCTACTAATGCTGGCTAT+TGG 0.387868 3.3:-61303417 MS.gene008093:CDS
GCCAGCATTAGTAGCTCTAT+TGG 0.388516 3.3:+61303423 None:intergenic
TTGGTTTAGGCTTTGGTTTG+AGG 0.390632 3.3:+61302291 None:intergenic
TCAAGGGAAATGCATTAATT+GGG 0.420828 3.3:-61303366 MS.gene008093:CDS
GCAGTTATTACTTCAGCTAA+AGG 0.433317 3.3:+61302418 None:intergenic
CTCTCCCAAAAGAAAACTCT+TGG 0.435959 3.3:+61302272 None:intergenic
TCATCTGTGGTATATGGAAA+TGG 0.441427 3.3:-61302232 MS.gene008093:CDS
AATTCCCGACCATTGAGGTT+TGG 0.446812 3.3:+61302386 None:intergenic
CTATTGGTCCTTTGGCCAGT+TGG 0.450132 3.3:+61303439 None:intergenic
AGAAATCAGAAAGAGTGGTT+TGG 0.453996 3.3:+61302464 None:intergenic
AAATCAATTTCTTGTCAAGA+AGG 0.456624 3.3:-61304447 MS.gene008093:CDS
GCATGTTTCAAAGGTGGTCT+GGG 0.461659 3.3:-61302210 MS.gene008093:CDS
GTATTCATGCATGACCCAAT+TGG 0.462426 3.3:+61303291 None:intergenic
TATTCAGAGCTGGCTAAAAT+GGG 0.463612 3.3:-61303505 MS.gene008093:intron
GCTGGCTATTGGAAAGCAAC+AGG 0.467708 3.3:-61303406 MS.gene008093:CDS
TGAAGAGAAATCAGAAAGAG+TGG 0.474541 3.3:+61302459 None:intergenic
ACCAATAGAGCTACTAATGC+TGG 0.495849 3.3:-61303424 MS.gene008093:CDS
TTGATTTATAAGCTCTTCAT+CGG 0.499059 3.3:+61304463 None:intergenic
TTAGCTGAAGTAATAACTGC+TGG 0.510536 3.3:-61302415 MS.gene008093:CDS
TGAACCAAACCTCAATGGTC+GGG 0.515698 3.3:-61302390 MS.gene008093:CDS
AGGGAGAGAAAATACCCAAC+TGG 0.520226 3.3:-61303454 MS.gene008093:CDS
TTACCATTCCATGTGTGGAT+AGG 0.526862 3.3:+61303236 None:intergenic
GTTTAGGCTTTGGTTTGAGG+TGG 0.531634 3.3:+61302294 None:intergenic
TGGCTTGAACCAAACCTCAA+TGG 0.535838 3.3:-61302395 MS.gene008093:CDS
CAGTTGGAGAATGAGAATCT+TGG 0.538735 3.3:-61302319 MS.gene008093:CDS
ATGGAAATGGCATGTTTCAA+AGG 0.539060 3.3:-61302219 MS.gene008093:CDS
TTTATAAGCTCTTCATCGGT+CGG 0.540210 3.3:+61304467 None:intergenic
GAAAAGGTCAAATTTCCGGC+TGG 0.542041 3.3:-61304503 MS.gene008093:CDS
ATGCATGAATACCGATTGGC+GGG 0.543086 3.3:-61303280 MS.gene008093:CDS
CAACCTATCCACACATGGAA+TGG 0.547037 3.3:-61303239 MS.gene008093:intron
GTCTTTAAGAAGGATAATTG+TGG 0.552416 3.3:-61302586 MS.gene008093:CDS
ATCACTGTTGAGGATGCAGT+TGG 0.553870 3.3:-61302335 MS.gene008093:CDS
TTGAACCAAACCTCAATGGT+CGG 0.560970 3.3:-61302391 MS.gene008093:CDS
AATTGTGGAAAGAAAATGGA+TGG 0.567327 3.3:-61302571 MS.gene008093:CDS
CAATATTACCATTCCATGTG+TGG 0.569497 3.3:+61303231 None:intergenic
AAAATGGATGGTTCAAAACA+TGG 0.570089 3.3:-61302559 MS.gene008093:CDS
AGAGTGTGTTACCCGCCAAT+CGG 0.575771 3.3:+61303269 None:intergenic
CTCAAGAACAATCACTGTTG+AGG 0.576259 3.3:-61302345 MS.gene008093:CDS
TCTCAGTAGAGTCTTTAAGA+AGG 0.576793 3.3:-61302596 MS.gene008093:CDS
TGGATGGTTCAAAACATGGA+AGG 0.583286 3.3:-61302555 MS.gene008093:CDS
TGACGAATTCCCGACCATTG+AGG 0.585386 3.3:+61302381 None:intergenic
ATTTGATGGTCCTTCTCTAG+AGG 0.592265 3.3:+61302525 None:intergenic
AATTCACCTGGCAAATCCCA+TGG 0.596462 3.3:+61304365 None:intergenic
CATGCATGAATACCGATTGG+CGG 0.600090 3.3:-61303281 MS.gene008093:CDS
AGGTTTAACTCCTCTAGAGA+AGG 0.606008 3.3:-61302535 MS.gene008093:CDS
GTCATCAGCTTCAGGACATG+TGG 0.608647 3.3:-61302176 MS.gene008093:CDS
GGTCATGCATGAATACCGAT+TGG 0.609797 3.3:-61303284 MS.gene008093:CDS
TGTGAACCATGGGATTTGCC+AGG 0.615720 3.3:-61304371 MS.gene008093:intron
GGAGAGAATCGATAACCAGC+CGG 0.632530 3.3:+61304488 None:intergenic
GAAAATACCCAACTGGCCAA+AGG 0.637584 3.3:-61303447 MS.gene008093:CDS
TATGAATAAGTGTGAACCAT+GGG 0.641317 3.3:-61304381 MS.gene008093:CDS
ATGTGGTCAATGATAGCTTG+TGG 0.641641 3.3:-61302159 MS.gene008093:CDS
GAAATGGCATGTTTCAAAGG+TGG 0.654634 3.3:-61302216 MS.gene008093:CDS
ATATGAATAAGTGTGAACCA+TGG 0.681966 3.3:-61304382 MS.gene008093:CDS
TGATGCTGATATCTCATCTG+TGG 0.688150 3.3:-61302245 MS.gene008093:CDS
GAGCACAACCTATCCACACA+TGG 0.690253 3.3:-61303244 MS.gene008093:CDS
TACAAAGGAAGAGCGCCGAG+TGG 0.721558 3.3:-61303322 MS.gene008093:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAAAAAAAAAAAAAAAAA+AGG + chr3.3:61304065-61304084 None:intergenic 0.0%
!!! AATTTACTTTATTTAGAAAA+AGG + chr3.3:61303784-61303803 None:intergenic 10.0%
!!! TAAAATTTTTGTCAAAATTA+CGG + chr3.3:61303603-61303622 None:intergenic 10.0%
!! AAATAGAAAGAAAAACAATT+TGG - chr3.3:61302817-61302836 MS.gene008093:intron 15.0%
!! ATAAAATAAAAAAAACTCCA+AGG + chr3.3:61302426-61302445 None:intergenic 15.0%
!! ATTATATTATATTAGTAGTC+TGG - chr3.3:61302385-61302404 MS.gene008093:CDS 15.0%
!! TAAAGACATTAAAAACTAAA+GGG - chr3.3:61302490-61302509 MS.gene008093:CDS 15.0%
!! TTAAAGACATTAAAAACTAA+AGG - chr3.3:61302489-61302508 MS.gene008093:CDS 15.0%
!!! AATTGTTTTTCTTTCTATTT+TGG + chr3.3:61302817-61302836 None:intergenic 15.0%
!!! AGTGATTTTGATTTTTTTTA+GGG - chr3.3:61303719-61303738 MS.gene008093:intron 15.0%
!!! TAGTGATTTTGATTTTTTTT+AGG - chr3.3:61303718-61303737 MS.gene008093:intron 15.0%
!!! TTTTTTTTTATAGAGTGAAT+GGG - chr3.3:61304075-61304094 MS.gene008093:intron 15.0%
!!! TTTTTTTTTTATAGAGTGAA+TGG - chr3.3:61304074-61304093 MS.gene008093:intron 15.0%
!! AAAAAAACAATAAATTCACC+TGG + chr3.3:61302345-61302364 None:intergenic 20.0%
!! AAAGACATTAAAAACTAAAG+GGG - chr3.3:61302491-61302510 MS.gene008093:CDS 20.0%
!! GAATGTTTACAATCAAAAAA+TGG - chr3.3:61302164-61302183 MS.gene008093:CDS 20.0%
!! TCAAAAAATGGAAAATGAAA+AGG - chr3.3:61302176-61302195 MS.gene008093:CDS 20.0%
!!! ACTTATGCTTTCTTATTTTT+TGG - chr3.3:61303165-61303184 MS.gene008093:intron 20.0%
!!! TTTTAAAGTTATTATGAGTG+CGG - chr3.3:61303090-61303109 MS.gene008093:intron 20.0%
! AAATCAATTTCTTGTCAAGA+AGG - chr3.3:61302248-61302267 MS.gene008093:CDS 25.0%
! AAATGAAAAGGTCAAATTTC+CGG - chr3.3:61302188-61302207 MS.gene008093:CDS 25.0%
! AATTGGGATGAAAAAAACAT+TGG - chr3.3:61303345-61303364 MS.gene008093:CDS 25.0%
! AGAGATTCATTAGTATTTGA+TGG + chr3.3:61304187-61304206 None:intergenic 25.0%
! CAAAGAAGACTTAATTTATG+TGG - chr3.3:61302776-61302795 MS.gene008093:intron 25.0%
! CACATAAATTAAGTCTTCTT+TGG + chr3.3:61302778-61302797 None:intergenic 25.0%
! GAAAGAAAAACAATTTGGAA+TGG - chr3.3:61302822-61302841 MS.gene008093:intron 25.0%
! TAAATTAAGTCTTCTTTGGT+AGG + chr3.3:61302774-61302793 None:intergenic 25.0%
! TAAGTTTGACAATAATGACA+CGG + chr3.3:61303648-61303667 None:intergenic 25.0%
! TAATTACACCTTAGAGATAT+TGG - chr3.3:61302952-61302971 MS.gene008093:intron 25.0%
! TCTAATGTATGTATGTCTTT+CGG - chr3.3:61303129-61303148 MS.gene008093:intron 25.0%
! TGATTTCTCTTCAAAACAAA+TGG - chr3.3:61304246-61304265 MS.gene008093:intron 25.0%
! TTGATTTATAAGCTCTTCAT+CGG + chr3.3:61302235-61302254 None:intergenic 25.0%
!! AAAGACAAAGAGATTTTCAA+GGG - chr3.3:61303313-61303332 MS.gene008093:CDS 25.0%
!! TAAACCAAGAGTTTTCTTTT+GGG - chr3.3:61304419-61304438 MS.gene008093:CDS 25.0%
!!! AAAACATTGGTTTTCTACAA+AGG - chr3.3:61303358-61303377 MS.gene008093:CDS 25.0%
AAAATGGATGGTTCAAAACA+TGG - chr3.3:61304136-61304155 MS.gene008093:intron 30.0%
AATTGTGGAAAGAAAATGGA+TGG - chr3.3:61304124-61304143 MS.gene008093:intron 30.0%
AGGTAATTCTATCAAACACA+TGG + chr3.3:61303573-61303592 None:intergenic 30.0%
ATATGAATAAGTGTGAACCA+TGG - chr3.3:61302313-61302332 MS.gene008093:CDS 30.0%
ATGCAGTGTTTATTTGATTC+AGG + chr3.3:61302667-61302686 None:intergenic 30.0%
CAAAAGAAAACTCTTGGTTT+AGG + chr3.3:61304420-61304439 None:intergenic 30.0%
CTAAAATGGGAGAAACAAAA+TGG - chr3.3:61303203-61303222 MS.gene008093:intron 30.0%
CTAAGGTGTAATTAAACCAT+TGG + chr3.3:61302946-61302965 None:intergenic 30.0%
GGATAATTGTGGAAAGAAAA+TGG - chr3.3:61304120-61304139 MS.gene008093:intron 30.0%
TATGAATAAGTGTGAACCAT+GGG - chr3.3:61302314-61302333 MS.gene008093:CDS 30.0%
TCAAGGGAAATGCATTAATT+GGG - chr3.3:61303329-61303348 MS.gene008093:CDS 30.0%
TTCAAGGGAAATGCATTAAT+TGG - chr3.3:61303328-61303347 MS.gene008093:CDS 30.0%
! CAAAGACAAAGAGATTTTCA+AGG - chr3.3:61303312-61303331 MS.gene008093:CDS 30.0%
! CTAAACCAAGAGTTTTCTTT+TGG - chr3.3:61304418-61304437 MS.gene008093:CDS 30.0%
! GTCTTTAAGAAGGATAATTG+TGG - chr3.3:61304109-61304128 MS.gene008093:intron 30.0%
!! ACAACTTTTAGAGAAACTAC+TGG - chr3.3:61303871-61303890 MS.gene008093:intron 30.0%
!!! AATGGTATTTTTTCTGTGTG+AGG - chr3.3:61303221-61303240 MS.gene008093:intron 30.0%
!!! ATGGTATTTTTTCTGTGTGA+GGG - chr3.3:61303222-61303241 MS.gene008093:intron 30.0%
!!! GTTTGGTTTTCACTATTGTA+TGG + chr3.3:61304217-61304236 None:intergenic 30.0%
!!! TTTTTTGGTTTATTCAGAGC+TGG - chr3.3:61303180-61303199 MS.gene008093:intron 30.0%
AAAACTCTTGGTTTAGGCTT+TGG + chr3.3:61304414-61304433 None:intergenic 35.0%
ACAGATCCTCAATGAATGTT+TGG + chr3.3:61303679-61303698 None:intergenic 35.0%
AGAAATCAGAAAGAGTGGTT+TGG + chr3.3:61304234-61304253 None:intergenic 35.0%
AGATAACGCCAATATCTCTA+AGG + chr3.3:61302963-61302982 None:intergenic 35.0%
ATGGAAATGGCATGTTTCAA+AGG - chr3.3:61304476-61304495 MS.gene008093:CDS 35.0%
CAAACAATGTCGTACTAAGA+CGG - chr3.3:61302734-61302753 MS.gene008093:intron 35.0%
CAACACGACACTAATAAATG+TGG - chr3.3:61303047-61303066 MS.gene008093:intron 35.0%
CAATATTACCATTCCATGTG+TGG + chr3.3:61303467-61303486 None:intergenic 35.0%
CACATTTATTAGTGTCGTGT+TGG + chr3.3:61303049-61303068 None:intergenic 35.0%
CCAGATCTAATCAATGACTT+TGG + chr3.3:61302620-61302639 None:intergenic 35.0%
GAGTGGTGAAAAAACCAATT+GGG - chr3.3:61303390-61303409 MS.gene008093:CDS 35.0%
GATATCTCATCTGTGGTATA+TGG - chr3.3:61304457-61304476 MS.gene008093:CDS 35.0%
GCAGTTATTACTTCAGCTAA+AGG + chr3.3:61304280-61304299 None:intergenic 35.0%
GTCAAAATTACGGTAACACA+AGG + chr3.3:61303593-61303612 None:intergenic 35.0%
TATTCAGAGCTGGCTAAAAT+GGG - chr3.3:61303190-61303209 MS.gene008093:intron 35.0%
TCATCTGTGGTATATGGAAA+TGG - chr3.3:61304463-61304482 MS.gene008093:CDS 35.0%
TGAAGAGAAATCAGAAAGAG+TGG + chr3.3:61304239-61304258 None:intergenic 35.0%
TGGTGGAAAAAGAAGAAAAG+TGG - chr3.3:61302891-61302910 MS.gene008093:intron 35.0%
TTAGCTGAAGTAATAACTGC+TGG - chr3.3:61304280-61304299 MS.gene008093:intron 35.0%
TTATTCAGAGCTGGCTAAAA+TGG - chr3.3:61303189-61303208 MS.gene008093:intron 35.0%
TTGGCGTTATCTTACTTTGA+TGG - chr3.3:61302971-61302990 MS.gene008093:intron 35.0%
TTTATAAGCTCTTCATCGGT+CGG + chr3.3:61302231-61302250 None:intergenic 35.0%
! CCAAAGTCATTGATTAGATC+TGG - chr3.3:61302617-61302636 MS.gene008093:intron 35.0%
! TCTCAGTAGAGTCTTTAAGA+AGG - chr3.3:61304099-61304118 MS.gene008093:intron 35.0%
! TGGTTTTCACTATTGTATGG+AGG + chr3.3:61304214-61304233 None:intergenic 35.0%
!! ACAATTTGGAATGGTGCTTT+TGG - chr3.3:61302831-61302850 MS.gene008093:intron 35.0%
!! CAATTTGGAATGGTGCTTTT+GGG - chr3.3:61302832-61302851 MS.gene008093:intron 35.0%
!!! CAATTGGTTTTTTCACCACT+CGG + chr3.3:61303391-61303410 None:intergenic 35.0%
ACCAATAGAGCTACTAATGC+TGG - chr3.3:61303271-61303290 MS.gene008093:CDS 40.0%
ATGTGGTCAATGATAGCTTG+TGG - chr3.3:61304536-61304555 MS.gene008093:CDS 40.0%
CAAGAATTGTCATCAGCTTC+AGG - chr3.3:61304511-61304530 MS.gene008093:CDS 40.0%
CAGTTGGAGAATGAGAATCT+TGG - chr3.3:61304376-61304395 MS.gene008093:CDS 40.0%
CATCGATGTTACAGATCTCT+AGG + chr3.3:61302594-61302613 None:intergenic 40.0%
CGAGTGGTGAAAAAACCAAT+TGG - chr3.3:61303389-61303408 MS.gene008093:CDS 40.0%
CTCAAGAACAATCACTGTTG+AGG - chr3.3:61304350-61304369 MS.gene008093:intron 40.0%
CTCTCCCAAAAGAAAACTCT+TGG + chr3.3:61304426-61304445 None:intergenic 40.0%
GAAATGGCATGTTTCAAAGG+TGG - chr3.3:61304479-61304498 MS.gene008093:CDS 40.0%
GTATTCATGCATGACCCAAT+TGG + chr3.3:61303407-61303426 None:intergenic 40.0%
GTCGATCCAAACATTCATTG+AGG - chr3.3:61303670-61303689 MS.gene008093:intron 40.0%
TAACCCTAAAACACCCTCAT+TGG - chr3.3:61302862-61302881 MS.gene008093:intron 40.0%
TGATGCTGATATCTCATCTG+TGG - chr3.3:61304450-61304469 MS.gene008093:CDS 40.0%
TGGATGGTTCAAAACATGGA+AGG - chr3.3:61304140-61304159 MS.gene008093:intron 40.0%
TGTTACAGATCTCTAGGCAT+CGG + chr3.3:61302588-61302607 None:intergenic 40.0%
TTACCATTCCATGTGTGGAT+AGG + chr3.3:61303462-61303481 None:intergenic 40.0%
TTGAACCAAACCTCAATGGT+CGG - chr3.3:61304304-61304323 MS.gene008093:intron 40.0%
! AAGAAAAGTGGTGACGACTA+GGG - chr3.3:61302903-61302922 MS.gene008093:intron 40.0%
! AGGTTTAACTCCTCTAGAGA+AGG - chr3.3:61304160-61304179 MS.gene008093:intron 40.0%
! ATTTGATGGTCCTTCTCTAG+AGG + chr3.3:61304173-61304192 None:intergenic 40.0%
! GTCATTGATTAGATCTGGAC+TGG - chr3.3:61302622-61302641 MS.gene008093:intron 40.0%
! TAGTAGCTCTATTGGTCCTT+TGG + chr3.3:61303267-61303286 None:intergenic 40.0%
! TTATTAGTGTCGTGTTGGTG+CGG + chr3.3:61303044-61303063 None:intergenic 40.0%
!! TTGGTTTAGGCTTTGGTTTG+AGG + chr3.3:61304407-61304426 None:intergenic 40.0%
!!! CTACCAATGAGGGTGTTTTA+GGG + chr3.3:61302868-61302887 None:intergenic 40.0%
!!! TCTACCAATGAGGGTGTTTT+AGG + chr3.3:61302869-61302888 None:intergenic 40.0%
AACACCCTCATTGGTAGATC+TGG - chr3.3:61302871-61302890 MS.gene008093:intron 45.0%
AATTCACCTGGCAAATCCCA+TGG + chr3.3:61302333-61302352 None:intergenic 45.0%
AATTCCCGACCATTGAGGTT+TGG + chr3.3:61304312-61304331 None:intergenic 45.0%
AGGGAGAGAAAATACCCAAC+TGG - chr3.3:61303241-61303260 MS.gene008093:CDS 45.0%
ATCACTGTTGAGGATGCAGT+TGG - chr3.3:61304360-61304379 MS.gene008093:intron 45.0%
CAACCTATCCACACATGGAA+TGG - chr3.3:61303456-61303475 MS.gene008093:CDS 45.0%
CTATGTACCACCGACACATA+AGG - chr3.3:61303015-61303034 MS.gene008093:intron 45.0%
GAAAAGGTCAAATTTCCGGC+TGG - chr3.3:61302192-61302211 MS.gene008093:CDS 45.0%
GAAAATACCCAACTGGCCAA+AGG - chr3.3:61303248-61303267 MS.gene008093:CDS 45.0%
GCATGTTTCAAAGGTGGTCT+GGG - chr3.3:61304485-61304504 MS.gene008093:CDS 45.0%
GGATTTGAAAAGCTACGCCT+TGG - chr3.3:61302406-61302425 MS.gene008093:CDS 45.0%
GGTCATGCATGAATACCGAT+TGG - chr3.3:61303411-61303430 MS.gene008093:CDS 45.0%
TATTGGTCCTTTGGCCAGTT+GGG + chr3.3:61303258-61303277 None:intergenic 45.0%
TCCACCAGATCTACCAATGA+GGG + chr3.3:61302878-61302897 None:intergenic 45.0%
TGAACCAAACCTCAATGGTC+GGG - chr3.3:61304305-61304324 MS.gene008093:intron 45.0%
TGGCTTGAACCAAACCTCAA+TGG - chr3.3:61304300-61304319 MS.gene008093:intron 45.0%
TTCCACCAGATCTACCAATG+AGG + chr3.3:61302879-61302898 None:intergenic 45.0%
! ATGCATGAATACCGATTGGC+GGG - chr3.3:61303415-61303434 MS.gene008093:CDS 45.0%
! CATGCATGAATACCGATTGG+CGG - chr3.3:61303414-61303433 MS.gene008093:CDS 45.0%
! GAAGAAAAGTGGTGACGACT+AGG - chr3.3:61302902-61302921 MS.gene008093:intron 45.0%
! GAGCTACTAATGCTGGCTAT+TGG - chr3.3:61303278-61303297 MS.gene008093:CDS 45.0%
! GCCAGCATTAGTAGCTCTAT+TGG + chr3.3:61303275-61303294 None:intergenic 45.0%
!! GTTTAGGCTTTGGTTTGAGG+TGG + chr3.3:61304404-61304423 None:intergenic 45.0%
ACCCTCATTGGTAGATCTGG+TGG - chr3.3:61302874-61302893 MS.gene008093:intron 50.0%
AGAGTGTGTTACCCGCCAAT+CGG + chr3.3:61303429-61303448 None:intergenic 50.0%
CTAGGGTTTGGCAAGGAGAA+AGG - chr3.3:61302920-61302939 MS.gene008093:intron 50.0%
CTATTGGTCCTTTGGCCAGT+TGG + chr3.3:61303259-61303278 None:intergenic 50.0%
GAGCACAACCTATCCACACA+TGG - chr3.3:61303451-61303470 MS.gene008093:CDS 50.0%
GCTGGCTATTGGAAAGCAAC+AGG - chr3.3:61303289-61303308 MS.gene008093:CDS 50.0%
GGAGAGAATCGATAACCAGC+CGG + chr3.3:61302210-61302229 None:intergenic 50.0%
GGCATGTTTCAAAGGTGGTC+TGG - chr3.3:61304484-61304503 MS.gene008093:CDS 50.0%
GGTGCGGTTACCTTATGTGT+CGG + chr3.3:61303028-61303047 None:intergenic 50.0%
GTCATCAGCTTCAGGACATG+TGG - chr3.3:61304519-61304538 MS.gene008093:CDS 50.0%
TGACGAATTCCCGACCATTG+AGG + chr3.3:61304317-61304336 None:intergenic 50.0%
TGTGAACCATGGGATTTGCC+AGG - chr3.3:61302324-61302343 MS.gene008093:CDS 50.0%
TTGGCAAGGAGAAAGGCCAA+TGG - chr3.3:61302927-61302946 MS.gene008093:intron 50.0%
! AAGTGGTGACGACTAGGGTT+TGG - chr3.3:61302908-61302927 MS.gene008093:intron 50.0%
GCGGTTACCTTATGTGTCGG+TGG + chr3.3:61303025-61303044 None:intergenic 55.0%
GTGACGACTAGGGTTTGGCA+AGG - chr3.3:61302913-61302932 MS.gene008093:intron 55.0%
!! TACAAAGGAAGAGCGCCGAG+TGG - chr3.3:61303373-61303392 MS.gene008093:CDS 55.0%


Chromosome Type Strat End Strand Name
chr3.3 gene 61302150 61304567 61302150 ID=MS.gene008093
chr3.3 mRNA 61302150 61304567 61302150 ID=MS.gene008093.t1;Parent=MS.gene008093
chr3.3 exon 61304372 61304567 61304372 ID=MS.gene008093.t1.exon1;Parent=MS.gene008093.t1
chr3.3 CDS 61304372 61304567 61304372 ID=cds.MS.gene008093.t1;Parent=MS.gene008093.t1
chr3.3 exon 61303240 61303520 61303240 ID=MS.gene008093.t1.exon2;Parent=MS.gene008093.t1
chr3.3 CDS 61303240 61303520 61303240 ID=cds.MS.gene008093.t1;Parent=MS.gene008093.t1
chr3.3 exon 61302150 61302629 61302150 ID=MS.gene008093.t1.exon3;Parent=MS.gene008093.t1
chr3.3 CDS 61302150 61302629 61302150 ID=cds.MS.gene008093.t1;Parent=MS.gene008093.t1
Gene Sequence

>MS.gene008093

ATGGGATCAAATGAGAATGTTTACAATCAAAAAATGGAAAATGAAAAGGTCAAATTTCCGGCTGGTTATCGATTCTCTCCGACCGATGAAGAGCTTATAAATCAATTTCTTGTCAAGAAGGTTGATGACAATAATTTCTGTGCTATAGATATTGCTGAAGTTGATATGAATAAGTGTGAACCATGGGATTTGCCAGGTGAATTTATTGTTTTTTTATAAGTAAATATTAGTTGTTATTATATTATATTAGTAGTCTGGATTTGAAAAGCTACGCCTTGGAGTTTTTTTTATTTTATTTTAAAATAAACGATGTTGATAGAACATTTATAACACATACATTTAAAGACATTAAAAACTAAAGGGGTGATGCATTTGCAAAAAGAACAGCAAAATACAAAAGTCTACAAATATGAATACATTCAAGTGTTAAAAAAACCGATGCCTAGAGATCTGTAACATCGATGACGCCAAAGTCATTGATTAGATCTGGACTGGATCAAAGCTAATCTTTCAACCTGAATCAAATAAACACTGCATTAAGATGAAAAATCAAGAAAACACTATTCAAGAACGAGAAATCATAACAAACAATGTCGTACTAAGACGGTGAAATCATAAAAACCTACCAAAGAAGACTTAATTTATGTGGAAATCACTTATATAACCAAAATAGAAAGAAAAACAATTTGGAATGGTGCTTTTGGGACAAAATTAACCCTAAAACACCCTCATTGGTAGATCTGGTGGAAAAAGAAGAAAAGTGGTGACGACTAGGGTTTGGCAAGGAGAAAGGCCAATGGTTTAATTACACCTTAGAGATATTGGCGTTATCTTACTTTGATGGTTATATATTTTCTCTTAATTACTATGTACCACCGACACATAAGGTAACCGCACCAACACGACACTAATAAATGTGGTTAGATTTAATTATTTTATTTTTTAAAGTTATTATGAGTGCGGATCTGTCAGTGTTATGTCTAATGTATGTATGTCTTTCGGTGTTTCATAACTTACTTATGCTTTCTTATTTTTTGGTTTATTCAGAGCTGGCTAAAATGGGAGAAACAAAATGGTATTTTTTCTGTGTGAGGGAGAGAAAATACCCAACTGGCCAAAGGACCAATAGAGCTACTAATGCTGGCTATTGGAAAGCAACAGGCAAAGACAAAGAGATTTTCAAGGGAAATGCATTAATTGGGATGAAAAAAACATTGGTTTTCTACAAAGGAAGAGCGCCGAGTGGTGAAAAAACCAATTGGGTCATGCATGAATACCGATTGGCGGGTAACACACTCTATGAGCACAACCTATCCACACATGGAATGGTAATATTGCTATATTTTTTTATTGCTTTGTTTTTGTCTATGATTTCTACTCTTACTACATGTGAAAATTCATTAGTGTATGTTCACATTGACCATGTGTTTGATAGAATTACCTTGTGTTACCGTAATTTTGACAAAAATTTTACTTTTGAATTTTGACAAAACGACCGTGTCATTATTGTCAAACTTATCGTCGATCCAAACATTCATTGAGGATCTGTTTGTAATAAATAATACAAATAGTGATTTTGATTTTTTTTAGGGAAATAGTGATTTTGATATATACAATTAAGAGATTAATTTCCTTTTTCTAAATAAAGTAAATTATTTCATGTTTGATTGCAATCATAAAAATAAAATAACAAAACTTTTATAAAAAATCAATTAAAAAATACAACTTTTAGAGAAACTACTGGAAACAACTTTTTGTTTGAAGCAGATTTAATATTCTTTCAAATAGAATTAAAAAAAACTGTAATAAATGAATAAAAACTAAAAAAAAAAAGATTGTTTTGTTTAAAATAACGTTTTTTTCATCTAATATTTTTTTTAACAAATTTTTTCATCTAATATTAATGTGTGAACCTTTTTTTTTTTTTTTTTTTTATAGAGTGAATGGGTTCTCAGTAGAGTCTTTAAGAAGGATAATTGTGGAAAGAAAATGGATGGTTCAAAACATGGAAGGTTTAACTCCTCTAGAGAAGGACCATCAAATACTAATGAATCTCTATTGCCTCCATACAATAGTGAAAACCAAACCACTCTTTCTGATTTCTCTTCAAAACAAATGGATGTTTATCCTTTAGCTGAAGTAATAACTGCTGGCTTGAACCAAACCTCAATGGTCGGGAATTCGTCAAACTTTTTCTTCTCTCAAGAACAATCACTGTTGAGGATGCAGTTGGAGAATGAGAATCTTGGAACCACCTCAAACCAAAGCCTAAACCAAGAGTTTTCTTTTGGGAGAGACACTGATGCTGATATCTCATCTGTGGTATATGGAAATGGCATGTTTCAAAGGTGGTCTGGGAATCAAGAATTGTCATCAGCTTCAGGACATGTGGTCAATGATAGCTTGTGGAATTTCTGA
Protein sequence

>MS.gene008093.t1

MGSNENVYNQKMENEKVKFPAGYRFSPTDEELINQFLVKKVDDNNFCAIDIAEVDMNKCEPWDLPELAKMGETKWYFFCVRERKYPTGQRTNRATNAGYWKATGKDKEIFKGNALIGMKKTLVFYKGRAPSGEKTNWVMHEYRLAGNTLYEHNLSTHGMSEWVLSRVFKKDNCGKKMDGSKHGRFNSSREGPSNTNESLLPPYNSENQTTLSDFSSKQMDVYPLAEVITAGLNQTSMVGNSSNFFFSQEQSLLRMQLENENLGTTSNQSLNQEFSFGRDTDADISSVVYGNGMFQRWSGNQELSSASGHVVNDSLWNF