Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene008246.t1 | RHN68173.1 | 94.1 | 538 | 27 | 3 | 1 | 536 | 60 | 594 | 3.00E-281 | 977.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene008246.t1 | Q7Y1B6 | 68.0 | 547 | 146 | 10 | 1 | 530 | 41 | 575 | 1.6e-198 | 693.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene008246.t1 | A0A072V8V6 | 94.1 | 538 | 27 | 3 | 1 | 536 | 13 | 547 | 2.1e-281 | 977.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene008246.t1 | TF | GRAS |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene008246.t1 | MTR_3g065980 | 96.468 | 538 | 14 | 3 | 1 | 536 | 13 | 547 | 0.0 | 1063 |
MS.gene008246.t1 | MTR_7g027190 | 35.619 | 525 | 269 | 14 | 39 | 529 | 184 | 673 | 3.61e-91 | 293 |
MS.gene008246.t1 | MTR_8g442410 | 35.427 | 398 | 215 | 11 | 155 | 530 | 149 | 526 | 1.91e-75 | 248 |
MS.gene008246.t1 | MTR_5g097480 | 37.436 | 390 | 207 | 8 | 158 | 529 | 174 | 544 | 3.88e-73 | 242 |
MS.gene008246.t1 | MTR_1g029420 | 36.292 | 383 | 213 | 8 | 162 | 529 | 226 | 592 | 4.64e-68 | 230 |
MS.gene008246.t1 | MTR_3g089055 | 34.726 | 383 | 219 | 8 | 162 | 529 | 204 | 570 | 2.29e-65 | 223 |
MS.gene008246.t1 | MTR_3g056110 | 36.504 | 389 | 212 | 11 | 158 | 529 | 172 | 542 | 2.43e-65 | 222 |
MS.gene008246.t1 | MTR_3g089055 | 34.726 | 383 | 219 | 8 | 162 | 529 | 199 | 565 | 2.49e-65 | 222 |
MS.gene008246.t1 | MTR_4g104020 | 34.085 | 399 | 218 | 11 | 155 | 529 | 143 | 520 | 2.71e-65 | 221 |
MS.gene008246.t1 | MTR_5g094450 | 34.211 | 418 | 231 | 11 | 135 | 529 | 136 | 532 | 1.10e-64 | 219 |
MS.gene008246.t1 | MTR_4g133660 | 33.681 | 383 | 224 | 8 | 161 | 528 | 175 | 542 | 1.49e-64 | 219 |
MS.gene008246.t1 | MTR_7g074650 | 37.566 | 378 | 200 | 11 | 165 | 531 | 442 | 794 | 1.75e-64 | 224 |
MS.gene008246.t1 | MTR_2g082090 | 34.615 | 390 | 216 | 9 | 158 | 528 | 209 | 578 | 3.02e-62 | 214 |
MS.gene008246.t1 | MTR_1g069725 | 34.884 | 387 | 216 | 10 | 153 | 528 | 101 | 462 | 2.21e-61 | 209 |
MS.gene008246.t1 | MTR_3g022830 | 29.234 | 431 | 224 | 7 | 162 | 530 | 26 | 437 | 1.58e-56 | 196 |
MS.gene008246.t1 | MTR_2g034250 | 29.353 | 402 | 253 | 6 | 148 | 530 | 197 | 586 | 1.57e-54 | 194 |
MS.gene008246.t1 | MTR_2g034280 | 29.500 | 400 | 252 | 7 | 148 | 530 | 190 | 576 | 1.81e-54 | 193 |
MS.gene008246.t1 | MTR_4g102790 | 32.750 | 400 | 219 | 12 | 155 | 528 | 286 | 661 | 4.70e-54 | 194 |
MS.gene008246.t1 | MTR_4g076020 | 35.013 | 377 | 198 | 10 | 165 | 529 | 88 | 429 | 4.66e-53 | 186 |
MS.gene008246.t1 | MTR_4g064120 | 31.175 | 417 | 255 | 8 | 129 | 527 | 222 | 624 | 1.70e-52 | 189 |
MS.gene008246.t1 | MTR_4g064180 | 30.732 | 410 | 252 | 8 | 136 | 527 | 229 | 624 | 5.29e-52 | 187 |
MS.gene008246.t1 | MTR_4g064150 | 31.387 | 411 | 249 | 8 | 136 | 528 | 337 | 732 | 6.80e-52 | 189 |
MS.gene008246.t1 | MTR_4g077760 | 34.286 | 385 | 221 | 12 | 158 | 529 | 190 | 555 | 9.97e-52 | 185 |
MS.gene008246.t1 | MTR_2g034260 | 28.642 | 405 | 251 | 6 | 148 | 530 | 197 | 585 | 1.04e-51 | 186 |
MS.gene008246.t1 | MTR_2g097410 | 31.888 | 392 | 239 | 7 | 152 | 528 | 362 | 740 | 2.20e-51 | 187 |
MS.gene008246.t1 | MTR_2g026250 | 30.534 | 393 | 233 | 10 | 158 | 530 | 225 | 597 | 2.53e-51 | 185 |
MS.gene008246.t1 | MTR_2g097350 | 31.888 | 392 | 237 | 7 | 151 | 528 | 264 | 639 | 7.05e-51 | 184 |
MS.gene008246.t1 | MTR_3g072710 | 31.591 | 421 | 232 | 12 | 149 | 535 | 108 | 506 | 1.32e-50 | 181 |
MS.gene008246.t1 | MTR_5g058860 | 33.985 | 409 | 210 | 15 | 155 | 528 | 113 | 496 | 1.99e-50 | 181 |
MS.gene008246.t1 | MTR_1g096030 | 32.039 | 412 | 217 | 17 | 155 | 529 | 74 | 459 | 7.22e-49 | 176 |
MS.gene008246.t1 | MTR_4g064200 | 31.026 | 390 | 237 | 9 | 154 | 528 | 277 | 649 | 1.22e-48 | 178 |
MS.gene008246.t1 | MTR_7g062120 | 30.946 | 391 | 236 | 9 | 156 | 529 | 367 | 740 | 1.40e-48 | 179 |
MS.gene008246.t1 | MTR_4g064160 | 30.233 | 387 | 242 | 8 | 156 | 528 | 311 | 683 | 2.45e-48 | 178 |
MS.gene008246.t1 | MTR_2g097310 | 30.612 | 392 | 242 | 8 | 151 | 528 | 262 | 637 | 3.73e-48 | 177 |
MS.gene008246.t1 | MTR_2g097473 | 30.155 | 388 | 240 | 9 | 155 | 528 | 283 | 653 | 6.76e-47 | 174 |
MS.gene008246.t1 | MTR_2g097467 | 29.897 | 388 | 241 | 8 | 155 | 528 | 283 | 653 | 7.10e-47 | 174 |
MS.gene008246.t1 | MTR_2g097390 | 30.000 | 390 | 243 | 8 | 153 | 528 | 267 | 640 | 5.85e-45 | 168 |
MS.gene008246.t1 | MTR_2g097463 | 29.873 | 395 | 234 | 10 | 154 | 528 | 283 | 654 | 1.95e-43 | 164 |
MS.gene008246.t1 | MTR_2g097380 | 29.275 | 386 | 226 | 10 | 151 | 528 | 214 | 560 | 2.32e-43 | 162 |
MS.gene008246.t1 | MTR_4g097080 | 27.604 | 384 | 248 | 6 | 162 | 529 | 134 | 503 | 8.24e-43 | 160 |
MS.gene008246.t1 | MTR_7g109580 | 26.835 | 395 | 262 | 5 | 148 | 530 | 176 | 555 | 2.01e-42 | 159 |
MS.gene008246.t1 | MTR_5g015490 | 29.146 | 398 | 246 | 7 | 154 | 529 | 107 | 490 | 5.76e-41 | 154 |
MS.gene008246.t1 | MTR_8g093070 | 32.642 | 386 | 219 | 14 | 158 | 528 | 136 | 495 | 4.67e-39 | 149 |
MS.gene008246.t1 | MTR_1g086970 | 25.917 | 409 | 257 | 9 | 147 | 530 | 92 | 479 | 8.72e-38 | 145 |
MS.gene008246.t1 | MTR_6g047750 | 30.435 | 391 | 229 | 10 | 160 | 529 | 294 | 662 | 9.67e-36 | 142 |
MS.gene008246.t1 | MTR_5g009080 | 34.685 | 222 | 131 | 3 | 149 | 361 | 44 | 260 | 1.49e-35 | 139 |
MS.gene008246.t1 | MTR_5g009080 | 38.182 | 165 | 89 | 3 | 365 | 529 | 327 | 478 | 4.85e-30 | 123 |
MS.gene008246.t1 | MTR_7g057230 | 29.187 | 418 | 249 | 12 | 132 | 528 | 265 | 656 | 3.51e-35 | 140 |
MS.gene008246.t1 | MTR_4g076140 | 35.135 | 222 | 130 | 4 | 149 | 361 | 36 | 252 | 7.33e-34 | 134 |
MS.gene008246.t1 | MTR_4g076140 | 36.364 | 165 | 92 | 2 | 365 | 529 | 318 | 469 | 4.56e-28 | 117 |
MS.gene008246.t1 | MTR_0092s0100 | 28.947 | 380 | 242 | 8 | 158 | 529 | 372 | 731 | 1.81e-33 | 135 |
MS.gene008246.t1 | MTR_0092s0100 | 28.684 | 380 | 243 | 8 | 158 | 529 | 369 | 728 | 1.98e-33 | 135 |
MS.gene008246.t1 | MTR_2g089100 | 26.014 | 419 | 243 | 11 | 155 | 528 | 46 | 442 | 3.87e-32 | 129 |
MS.gene008246.t1 | MTR_4g026485 | 26.649 | 379 | 243 | 9 | 162 | 529 | 270 | 624 | 7.13e-31 | 127 |
MS.gene008246.t1 | MTR_2g099110 | 27.342 | 395 | 242 | 9 | 162 | 529 | 75 | 451 | 4.53e-29 | 120 |
MS.gene008246.t1 | MTR_5g015950 | 25.290 | 431 | 237 | 11 | 162 | 528 | 36 | 445 | 1.68e-28 | 118 |
MS.gene008246.t1 | MTR_3g053270 | 25.290 | 431 | 237 | 11 | 162 | 528 | 36 | 445 | 1.68e-28 | 118 |
MS.gene008246.t1 | MTR_4g095500 | 25.352 | 426 | 241 | 11 | 162 | 528 | 60 | 467 | 1.17e-27 | 116 |
MS.gene008246.t1 | MTR_8g077940 | 26.943 | 386 | 245 | 13 | 158 | 529 | 179 | 541 | 3.66e-24 | 106 |
MS.gene008246.t1 | MTR_8g020840 | 24.372 | 398 | 252 | 10 | 162 | 530 | 172 | 549 | 8.48e-23 | 102 |
MS.gene008246.t1 | MTR_4g122240 | 52.381 | 105 | 40 | 2 | 148 | 252 | 23 | 117 | 5.24e-22 | 91.7 |
MS.gene008246.t1 | MTR_3g022005 | 39.130 | 92 | 54 | 1 | 439 | 530 | 37 | 126 | 1.35e-15 | 73.9 |
MS.gene008246.t1 | MTR_3g022580 | 35.200 | 125 | 67 | 3 | 406 | 530 | 74 | 184 | 1.46e-14 | 72.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene008246.t1 | AT2G01570 | 60.784 | 561 | 166 | 7 | 2 | 530 | 44 | 582 | 0.0 | 664 |
MS.gene008246.t1 | AT3G03450 | 63.401 | 541 | 146 | 12 | 3 | 530 | 45 | 546 | 0.0 | 662 |
MS.gene008246.t1 | AT1G14920 | 61.455 | 550 | 152 | 8 | 1 | 533 | 27 | 533 | 0.0 | 660 |
MS.gene008246.t1 | AT1G66350 | 60.708 | 537 | 152 | 9 | 1 | 534 | 31 | 511 | 0.0 | 639 |
MS.gene008246.t1 | AT5G17490 | 57.757 | 535 | 171 | 10 | 1 | 530 | 33 | 517 | 0.0 | 585 |
MS.gene008246.t1 | AT5G48150 | 37.984 | 387 | 202 | 9 | 162 | 529 | 123 | 490 | 1.29e-73 | 242 |
MS.gene008246.t1 | AT5G48150 | 37.984 | 387 | 202 | 9 | 162 | 529 | 123 | 490 | 1.29e-73 | 242 |
MS.gene008246.t1 | AT5G48150 | 37.984 | 387 | 202 | 9 | 162 | 529 | 123 | 490 | 1.29e-73 | 242 |
MS.gene008246.t1 | AT5G48150 | 37.984 | 387 | 202 | 9 | 162 | 529 | 123 | 490 | 1.29e-73 | 242 |
MS.gene008246.t1 | AT3G54220 | 36.111 | 432 | 230 | 13 | 111 | 528 | 250 | 649 | 5.05e-66 | 226 |
MS.gene008246.t1 | AT1G50600 | 35.065 | 385 | 217 | 10 | 161 | 529 | 159 | 526 | 7.46e-66 | 223 |
MS.gene008246.t1 | AT2G04890 | 33.858 | 381 | 220 | 7 | 161 | 529 | 53 | 413 | 9.26e-66 | 219 |
MS.gene008246.t1 | AT1G50600 | 35.065 | 385 | 217 | 10 | 161 | 529 | 234 | 601 | 3.26e-65 | 223 |
MS.gene008246.t1 | AT1G50600 | 35.065 | 385 | 217 | 10 | 161 | 529 | 230 | 597 | 4.56e-65 | 222 |
MS.gene008246.t1 | AT5G41920 | 36.061 | 391 | 205 | 11 | 156 | 529 | 38 | 400 | 1.15e-63 | 213 |
MS.gene008246.t1 | AT1G21450 | 33.766 | 385 | 225 | 8 | 160 | 529 | 224 | 593 | 4.62e-60 | 209 |
MS.gene008246.t1 | AT4G17230 | 34.103 | 390 | 220 | 7 | 158 | 529 | 155 | 525 | 1.21e-58 | 203 |
MS.gene008246.t1 | AT4G17230 | 34.103 | 390 | 220 | 7 | 158 | 529 | 155 | 525 | 1.21e-58 | 203 |
MS.gene008246.t1 | AT5G59450 | 32.134 | 389 | 237 | 8 | 156 | 529 | 222 | 598 | 2.10e-55 | 196 |
MS.gene008246.t1 | AT1G07530 | 31.818 | 396 | 237 | 10 | 150 | 528 | 385 | 764 | 2.22e-52 | 191 |
MS.gene008246.t1 | AT1G50420 | 30.388 | 464 | 251 | 12 | 126 | 529 | 28 | 479 | 9.45e-52 | 184 |
MS.gene008246.t1 | AT3G46600 | 30.971 | 381 | 236 | 7 | 162 | 529 | 5 | 371 | 7.03e-51 | 179 |
MS.gene008246.t1 | AT1G63100 | 31.328 | 399 | 227 | 12 | 158 | 528 | 249 | 628 | 1.58e-50 | 183 |
MS.gene008246.t1 | AT1G63100 | 31.328 | 399 | 227 | 12 | 158 | 528 | 274 | 653 | 3.07e-50 | 183 |
MS.gene008246.t1 | AT3G46600 | 30.749 | 387 | 241 | 7 | 156 | 529 | 175 | 547 | 5.85e-50 | 181 |
MS.gene008246.t1 | AT3G46600 | 31.008 | 387 | 240 | 8 | 156 | 529 | 207 | 579 | 5.97e-50 | 181 |
MS.gene008246.t1 | AT1G55580 | 32.267 | 344 | 204 | 6 | 199 | 529 | 118 | 445 | 1.23e-49 | 177 |
MS.gene008246.t1 | AT1G07520 | 29.275 | 386 | 242 | 7 | 162 | 528 | 155 | 528 | 1.43e-47 | 173 |
MS.gene008246.t1 | AT1G07520 | 29.275 | 386 | 242 | 7 | 162 | 528 | 155 | 528 | 1.43e-47 | 173 |
MS.gene008246.t1 | AT5G66770 | 36.522 | 345 | 192 | 11 | 197 | 529 | 255 | 584 | 2.36e-47 | 174 |
MS.gene008246.t1 | AT1G07520 | 29.275 | 386 | 242 | 7 | 162 | 528 | 319 | 692 | 5.41e-47 | 174 |
MS.gene008246.t1 | AT1G07520 | 29.275 | 386 | 242 | 7 | 162 | 528 | 320 | 693 | 5.68e-47 | 174 |
MS.gene008246.t1 | AT2G29060 | 30.026 | 383 | 239 | 9 | 162 | 528 | 285 | 654 | 1.69e-46 | 172 |
MS.gene008246.t1 | AT2G29060 | 30.026 | 383 | 239 | 9 | 162 | 528 | 322 | 691 | 2.35e-46 | 172 |
MS.gene008246.t1 | AT2G29065 | 28.941 | 387 | 243 | 6 | 162 | 528 | 253 | 627 | 3.02e-45 | 169 |
MS.gene008246.t1 | AT2G37650 | 30.077 | 389 | 240 | 9 | 156 | 529 | 330 | 701 | 1.12e-44 | 168 |
MS.gene008246.t1 | AT2G37650 | 30.077 | 389 | 240 | 9 | 156 | 529 | 342 | 713 | 1.40e-44 | 168 |
MS.gene008246.t1 | AT4G08250 | 31.000 | 400 | 240 | 15 | 152 | 532 | 98 | 480 | 1.07e-43 | 162 |
MS.gene008246.t1 | AT4G37650 | 28.643 | 398 | 239 | 8 | 162 | 529 | 147 | 529 | 2.07e-43 | 162 |
MS.gene008246.t1 | AT3G50650 | 33.141 | 347 | 207 | 9 | 195 | 529 | 209 | 542 | 8.18e-43 | 160 |
MS.gene008246.t1 | AT5G52510 | 29.146 | 398 | 230 | 9 | 160 | 529 | 267 | 640 | 9.38e-41 | 156 |
MS.gene008246.t1 | AT3G49950 | 27.020 | 396 | 241 | 11 | 162 | 528 | 31 | 407 | 2.89e-30 | 123 |
MS.gene008246.t1 | AT4G00150 | 27.228 | 404 | 242 | 14 | 136 | 529 | 193 | 554 | 6.69e-29 | 120 |
MS.gene008246.t1 | AT4G36710 | 26.087 | 391 | 251 | 11 | 155 | 530 | 119 | 486 | 6.12e-28 | 117 |
MS.gene008246.t1 | AT3G60630 | 30.032 | 313 | 183 | 12 | 230 | 529 | 333 | 622 | 1.04e-27 | 117 |
MS.gene008246.t1 | AT2G45160 | 27.066 | 351 | 215 | 9 | 195 | 529 | 314 | 639 | 3.22e-26 | 113 |
MS.gene008246.t1 | AT3G13840 | 25.189 | 397 | 257 | 11 | 150 | 529 | 137 | 510 | 3.03e-19 | 91.3 |
Find 146 sgRNAs with CRISPR-Local
Find 154 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCTGATTCTTCTCAAATTAA+TGG | 0.141619 | 3.1:+55356262 | MS.gene008246:CDS |
TAATGGCCCTTTGGCTTCTT+TGG | 0.168146 | 3.1:+55356279 | MS.gene008246:CDS |
TCGTCTTGTTCATACTTTAA+TGG | 0.200580 | 3.1:+55356531 | MS.gene008246:CDS |
AGAGTTCACGTTATTGATTT+TGG | 0.250794 | 3.1:+55356832 | MS.gene008246:CDS |
GATGAATCGATTGTTTCTTC+TGG | 0.269432 | 3.1:-55356703 | None:intergenic |
TTGCTGGTGGTGATGGATAT+AGG | 0.281007 | 3.1:+55357556 | MS.gene008246:CDS |
TGGGTTCGAACCGGTTCATT+TGG | 0.283884 | 3.1:+55357491 | MS.gene008246:CDS |
AACTCGAACTCGACCGGGTT+GGG | 0.288531 | 3.1:+55357333 | MS.gene008246:CDS |
TTCACTGGAGGGTTCAAATT+CGG | 0.293217 | 3.1:+55357296 | MS.gene008246:CDS |
ACTTTGTTAGCTTTGTTTGC+TGG | 0.304267 | 3.1:+55357540 | MS.gene008246:CDS |
TGCAAGTGCTTGAGCGAAAT+AGG | 0.304740 | 3.1:-55356662 | None:intergenic |
AATAATGGGTGTCTTATGTT+AGG | 0.308660 | 3.1:+55357588 | MS.gene008246:CDS |
AATGGCCCTTTGGCTTCTTT+GGG | 0.316209 | 3.1:+55356280 | MS.gene008246:CDS |
TCACTGGAGGGTTCAAATTC+GGG | 0.316887 | 3.1:+55357297 | MS.gene008246:CDS |
TATAGGGTTGAGGAAAATAA+TGG | 0.321686 | 3.1:+55357573 | MS.gene008246:CDS |
TGCTGGTGGTGATGGATATA+GGG | 0.327845 | 3.1:+55357557 | MS.gene008246:CDS |
ATCAATAACGTGAACTCTTC+CGG | 0.332256 | 3.1:-55356827 | None:intergenic |
CCATTAATTTGAGAAGAATC+AGG | 0.334574 | 3.1:-55356262 | None:intergenic |
GGTCGGATCTCAAGTATATT+CGG | 0.340983 | 3.1:-55357072 | None:intergenic |
TGAACAGCTTGAGATGGTTA+TGG | 0.351890 | 3.1:+55356135 | MS.gene008246:CDS |
CGGTCTAGGATGGGTTCAGC+TGG | 0.354100 | 3.1:+55357471 | MS.gene008246:CDS |
CTTTGACTCAATGGCGGTCT+AGG | 0.354790 | 3.1:+55357457 | MS.gene008246:CDS |
TTCTCAAATTAATGGCCCTT+TGG | 0.370814 | 3.1:+55356270 | MS.gene008246:CDS |
GGGTTCGAACCGGTTCATTT+GGG | 0.373116 | 3.1:+55357492 | MS.gene008246:CDS |
GAGAACTTTCTCAACTGAAC+CGG | 0.373578 | 3.1:-55357151 | None:intergenic |
GACATCGCCACCGCTGGTTC+CGG | 0.379757 | 3.1:-55356445 | None:intergenic |
GAAGTGCATGCGAAGAATTT+CGG | 0.383768 | 3.1:-55356731 | None:intergenic |
CGGGTTGGGTTCACCGAGTC+AGG | 0.389915 | 3.1:+55357347 | MS.gene008246:CDS |
CTCGAGTTTATTCGATTCAC+TGG | 0.390732 | 3.1:+55357281 | MS.gene008246:CDS |
GAACAGCTTGAGATGGTTAT+GGG | 0.390884 | 3.1:+55356136 | MS.gene008246:CDS |
ATGAATCGATTGTTTCTTCT+GGG | 0.391052 | 3.1:-55356702 | None:intergenic |
CCTCCTACGTTCCGGTTAAC+CGG | 0.402531 | 3.1:+55356916 | MS.gene008246:CDS |
AATGTAAAGCTTCGGTAAAC+CGG | 0.409643 | 3.1:-55357254 | None:intergenic |
CTTGTTGATACACAAGAAAC+AGG | 0.412513 | 3.1:+55356505 | MS.gene008246:CDS |
TATGATCTTAGCGCTATTCC+TGG | 0.412789 | 3.1:+55356355 | MS.gene008246:CDS |
GACTCAATGGCGGTCTAGGA+TGG | 0.416785 | 3.1:+55357461 | MS.gene008246:CDS |
CTCGAAGCCTTCGCCGGTGC+CGG | 0.419305 | 3.1:+55356808 | MS.gene008246:CDS |
GGTGGGTATGCAGCCATTCC+AGG | 0.420175 | 3.1:-55356373 | None:intergenic |
CGCCTGCGGCGGTCCGATGC+CGG | 0.422904 | 3.1:-55356935 | None:intergenic |
GCGGTCCGATGCCGGTTAAC+CGG | 0.427022 | 3.1:-55356927 | None:intergenic |
GACGAGTTGTTAGCAGCATT+AGG | 0.430561 | 3.1:+55356067 | MS.gene008246:CDS |
ACCCAACTGATCTATATTCA+TGG | 0.430916 | 3.1:+55356212 | MS.gene008246:CDS |
AACTCTTCCGGCACCGGCGA+AGG | 0.438520 | 3.1:-55356815 | None:intergenic |
GCTTTGTTTGCTGGTGGTGA+TGG | 0.445012 | 3.1:+55357549 | MS.gene008246:CDS |
AATGAAGACTTGGTCTGAAC+CGG | 0.458221 | 3.1:+55356426 | MS.gene008246:CDS |
GTTAACAGCAACAGCTTCAC+CGG | 0.459180 | 3.1:-55357094 | None:intergenic |
GCATTTGAACCCAAATGAAC+CGG | 0.461370 | 3.1:-55357501 | None:intergenic |
GACATGAAACTTTGACTCAA+TGG | 0.462171 | 3.1:+55357448 | MS.gene008246:CDS |
TTTCTCAACTGAACCGGGTC+GGG | 0.464834 | 3.1:-55357145 | None:intergenic |
ACCCATGAATATAGATCAGT+TGG | 0.476940 | 3.1:-55356214 | None:intergenic |
CACTCATTGCTACTTCTGCT+TGG | 0.477277 | 3.1:+55357625 | MS.gene008246:CDS |
CCAAGTCTTCATTCGCTTAG+CGG | 0.479328 | 3.1:-55356416 | None:intergenic |
GGTGTTCAGTTCGAATTTCG+TGG | 0.481901 | 3.1:+55357018 | MS.gene008246:CDS |
GGGTTCAGCTGGGTTCGAAC+CGG | 0.481901 | 3.1:+55357482 | MS.gene008246:CDS |
CAAGCGCTGGCATTACGCCC+CGG | 0.482592 | 3.1:+55356889 | MS.gene008246:CDS |
GATGTCACCACCGGCGGTGG+TGG | 0.485090 | 3.1:+55356462 | MS.gene008246:CDS |
TTATTAGCTTCGTTACAAAT+CGG | 0.486275 | 3.1:+55356619 | MS.gene008246:CDS |
GTCGGATCTCAAGTATATTC+GGG | 0.493358 | 3.1:-55357071 | None:intergenic |
TTGATGTCAGAGATTTATCT+CGG | 0.494129 | 3.1:+55357375 | MS.gene008246:CDS |
CGAGTAATAATGTAAAGCTT+CGG | 0.494988 | 3.1:-55357262 | None:intergenic |
GCCAGCGCTTATGCAAGCGC+TGG | 0.499517 | 3.1:+55356876 | MS.gene008246:CDS |
AATTCAAACTCGAACTCGAC+CGG | 0.499871 | 3.1:+55357327 | MS.gene008246:CDS |
GTTAGCAGCATTAGGTTACA+AGG | 0.501092 | 3.1:+55356075 | MS.gene008246:CDS |
GGCTGCATACCCACCACCTC+AGG | 0.501817 | 3.1:+55356381 | MS.gene008246:CDS |
GGTGGTGACATCGCCACCGC+TGG | 0.504943 | 3.1:-55356451 | None:intergenic |
CAAGGTTCGTTCTTCAGACA+TGG | 0.505343 | 3.1:+55356093 | MS.gene008246:CDS |
GGCGATGTCACCACCGGCGG+TGG | 0.505386 | 3.1:+55356459 | MS.gene008246:CDS |
GCCAGCGCTTGCATAAGCGC+TGG | 0.505414 | 3.1:-55356877 | None:intergenic |
ATAATGGGTGTCTTATGTTA+GGG | 0.505618 | 3.1:+55357589 | MS.gene008246:CDS |
AACCGGCATCGGACCGCCGC+AGG | 0.507955 | 3.1:+55356933 | MS.gene008246:CDS |
ATAGGGTTGAGGAAAATAAT+GGG | 0.509069 | 3.1:+55357574 | MS.gene008246:CDS |
TTATGTTAGGGTGGCATACA+AGG | 0.510723 | 3.1:+55357601 | MS.gene008246:CDS |
AACGTGAACTCTTCCGGCAC+CGG | 0.512893 | 3.1:-55356821 | None:intergenic |
GTAAACCGGTCTACGAAAAC+CGG | 0.513340 | 3.1:-55357240 | None:intergenic |
GTCTTAAACAAGGGATGCAA+TGG | 0.515161 | 3.1:+55356854 | MS.gene008246:CDS |
ATGCTTTGCAACAAGTGGGC+TGG | 0.515330 | 3.1:+55356968 | MS.gene008246:CDS |
CGGAACGTAGGAGGACCGCC+GGG | 0.517761 | 3.1:-55356907 | None:intergenic |
AGTTTATTCGATTCACTGGA+GGG | 0.520106 | 3.1:+55357285 | MS.gene008246:CDS |
CCGCTAAGCGAATGAAGACT+TGG | 0.520536 | 3.1:+55356416 | MS.gene008246:CDS |
GAAGAACCCAAAGAAGCCAA+AGG | 0.524685 | 3.1:-55356286 | None:intergenic |
CATCATTGAAAGTGCTGTTG+AGG | 0.525023 | 3.1:-55356324 | None:intergenic |
AAACTCGAACTCGACCGGGT+TGG | 0.526219 | 3.1:+55357332 | MS.gene008246:CDS |
CCGGCGGTCCTCCTACGTTC+CGG | 0.526841 | 3.1:+55356908 | MS.gene008246:CDS |
TACCGATGCTTTGCAACAAG+TGG | 0.527843 | 3.1:+55356963 | MS.gene008246:CDS |
GCACAGCTTGCTCAGACAAT+CGG | 0.532422 | 3.1:+55356997 | MS.gene008246:CDS |
AGAACTTTCTCAACTGAACC+GGG | 0.532923 | 3.1:-55357150 | None:intergenic |
ACTCAATGGCGGTCTAGGAT+GGG | 0.535484 | 3.1:+55357462 | MS.gene008246:CDS |
GAACAGTATCAGAAGAAAGA+TGG | 0.536773 | 3.1:-55356183 | None:intergenic |
AGGGTTGAGTTCAGTGAGCA+TGG | 0.538956 | 3.1:-55356242 | None:intergenic |
TGTAACGTGGTGGCTTATGA+AGG | 0.543460 | 3.1:+55357408 | MS.gene008246:CDS |
CATTAATTTGAGAAGAATCA+GGG | 0.545322 | 3.1:-55356261 | None:intergenic |
TGGCTTATGAAGGAGTGGAC+CGG | 0.547664 | 3.1:+55357418 | MS.gene008246:CDS |
GAACAAGAAGCGAATCATAA+CGG | 0.547991 | 3.1:+55357216 | MS.gene008246:CDS |
CCGGAACGTAGGAGGACCGC+CGG | 0.550263 | 3.1:-55356908 | None:intergenic |
CATACTATGTTAGCCCGACC+CGG | 0.551742 | 3.1:+55357132 | MS.gene008246:CDS |
ATGGGTAGTGCTCAAGAAGA+AGG | 0.552354 | 3.1:+55356154 | MS.gene008246:CDS |
GTACCCTGAGTTAACTCACT+TGG | 0.552518 | 3.1:-55357667 | None:intergenic |
GCCCACTTGTTGCAAAGCAT+CGG | 0.552582 | 3.1:-55356965 | None:intergenic |
ACGTTCCGGTTAACCGGCAT+CGG | 0.556259 | 3.1:+55356922 | MS.gene008246:CDS |
GGTCTAGGATGGGTTCAGCT+GGG | 0.557426 | 3.1:+55357472 | MS.gene008246:CDS |
TTGTTAGCTTTGTTTGCTGG+TGG | 0.558150 | 3.1:+55357543 | MS.gene008246:CDS |
CTTGTATTCTCCACCACCGC+CGG | 0.561471 | 3.1:-55356472 | None:intergenic |
GGCTTATGAAGGAGTGGACC+GGG | 0.562784 | 3.1:+55357419 | MS.gene008246:CDS |
CCCAACTGATCTATATTCAT+GGG | 0.565004 | 3.1:+55356213 | MS.gene008246:CDS |
AAATGAGCGAATTTGAGATA+AGG | 0.566361 | 3.1:-55356766 | None:intergenic |
AAGAACCCAAAGAAGCCAAA+GGG | 0.567027 | 3.1:-55356285 | None:intergenic |
AAAGCTTGAACAGCTTGAGA+TGG | 0.568021 | 3.1:+55356129 | MS.gene008246:CDS |
GCTATTCTCGAAGCCTTCGC+CGG | 0.569462 | 3.1:+55356802 | MS.gene008246:CDS |
TGATGTCAGAGATTTATCTC+GGG | 0.573037 | 3.1:+55357376 | MS.gene008246:CDS |
AGCGGTGGCGATGTCACCAC+CGG | 0.573199 | 3.1:+55356453 | MS.gene008246:CDS |
GTCTGAACCGGAACCAGCGG+TGG | 0.573416 | 3.1:+55356438 | MS.gene008246:CDS |
GCACTTGCAAGAAGAATCTA+CGG | 0.577917 | 3.1:+55356676 | MS.gene008246:CDS |
TGGTGATGGATATAGGGTTG+AGG | 0.579503 | 3.1:+55357563 | MS.gene008246:CDS |
ATTTGTTTGTAACAGTATTG+CGG | 0.580712 | 3.1:+55357041 | MS.gene008246:CDS |
GAGTTTATTCGATTCACTGG+AGG | 0.584143 | 3.1:+55357284 | MS.gene008246:CDS |
CCGGTTAACCGGAACGTAGG+AGG | 0.584326 | 3.1:-55356916 | None:intergenic |
ATTCAAACTCGAACTCGACC+GGG | 0.585112 | 3.1:+55357328 | MS.gene008246:CDS |
TCTTAGCGCTATTCCTGGAA+TGG | 0.585827 | 3.1:+55356360 | MS.gene008246:CDS |
GACATCAACAAATCCTGACT+CGG | 0.588551 | 3.1:-55357360 | None:intergenic |
CTTTCTCAACTGAACCGGGT+CGG | 0.589796 | 3.1:-55357146 | None:intergenic |
AAGTTTCATGTCTTTCAACC+CGG | 0.597660 | 3.1:-55357437 | None:intergenic |
TCGGTATTGTCCGCCTGCGG+CGG | 0.603762 | 3.1:-55356946 | None:intergenic |
GTATTCTCCACCACCGCCGG+TGG | 0.604682 | 3.1:-55356469 | None:intergenic |
CTGACTCGGTGAACCCAACC+CGG | 0.607910 | 3.1:-55357346 | None:intergenic |
CGGCATCGGACCGCCGCAGG+CGG | 0.610809 | 3.1:+55356936 | MS.gene008246:CDS |
CCCATGAATATAGATCAGTT+GGG | 0.618101 | 3.1:-55356213 | None:intergenic |
AATATACTTGAGATCCGACC+CGG | 0.619736 | 3.1:+55357075 | MS.gene008246:CDS |
ACCGATGCTTTGCAACAAGT+GGG | 0.624749 | 3.1:+55356964 | MS.gene008246:CDS |
TGTGTATCAACAAGAACCAC+CGG | 0.627324 | 3.1:-55356496 | None:intergenic |
CGTGGTGGCTTATGAAGGAG+TGG | 0.627503 | 3.1:+55357413 | MS.gene008246:CDS |
GCGCTGGCATTACGCCCCGG+CGG | 0.637073 | 3.1:+55356892 | MS.gene008246:CDS |
TTGGTCTGAACCGGAACCAG+CGG | 0.638264 | 3.1:+55356435 | MS.gene008246:CDS |
ATGGGTGTCTTATGTTAGGG+TGG | 0.639065 | 3.1:+55357592 | MS.gene008246:CDS |
GCATCGGTATTGTCCGCCTG+CGG | 0.640917 | 3.1:-55356949 | None:intergenic |
GGTGGTGGAGAATACAAGAC+CGG | 0.643290 | 3.1:+55356477 | MS.gene008246:CDS |
CAGCAACAGCTTCACCGGGT+CGG | 0.649987 | 3.1:-55357089 | None:intergenic |
AGTCTTCATTCGCTTAGCGG+CGG | 0.650821 | 3.1:-55356413 | None:intergenic |
TTAACAGCAACAGCTTCACC+GGG | 0.654245 | 3.1:-55357093 | None:intergenic |
AGAAGCGAATCATAACGGAC+CGG | 0.675008 | 3.1:+55357221 | MS.gene008246:CDS |
GGTGGCGATGTCACCACCGG+CGG | 0.680903 | 3.1:+55356456 | MS.gene008246:CDS |
CGGGAGACAGATATGTAACG+TGG | 0.685049 | 3.1:+55357395 | MS.gene008246:CDS |
ATGCCGGTTAACCGGAACGT+AGG | 0.689075 | 3.1:-55356919 | None:intergenic |
ATGAAACTTTGACTCAATGG+CGG | 0.692606 | 3.1:+55357451 | MS.gene008246:CDS |
GGTGGAGAATACAAGACCGG+TGG | 0.704648 | 3.1:+55356480 | MS.gene008246:CDS |
GAGACAGATATGTAACGTGG+TGG | 0.715009 | 3.1:+55357398 | MS.gene008246:CDS |
GGAACGTAGGAGGACCGCCG+GGG | 0.728118 | 3.1:-55356906 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
! | ATTTGTTTGTAACAGTATTG+CGG | + | chr3.1:55357041-55357060 | MS.gene008246:CDS | 25.0% |
!! | CATTAATTTGAGAAGAATCA+GGG | - | chr3.1:55356264-55356283 | None:intergenic | 25.0% |
!! | TTATTAGCTTCGTTACAAAT+CGG | + | chr3.1:55356619-55356638 | MS.gene008246:CDS | 25.0% |
!!! | ATTGATTTTGGTCTTAAACA+AGG | + | chr3.1:55356844-55356863 | MS.gene008246:CDS | 25.0% |
!!! | TTGATTTTGGTCTTAAACAA+GGG | + | chr3.1:55356845-55356864 | MS.gene008246:CDS | 25.0% |
ATAGGGTTGAGGAAAATAAT+GGG | + | chr3.1:55357574-55357593 | MS.gene008246:CDS | 30.0% | |
CCTGATTCTTCTCAAATTAA+TGG | + | chr3.1:55356262-55356281 | MS.gene008246:CDS | 30.0% | |
CGAGTAATAATGTAAAGCTT+CGG | - | chr3.1:55357265-55357284 | None:intergenic | 30.0% | |
TATAGGGTTGAGGAAAATAA+TGG | + | chr3.1:55357573-55357592 | MS.gene008246:CDS | 30.0% | |
TTGATGTCAGAGATTTATCT+CGG | + | chr3.1:55357375-55357394 | MS.gene008246:CDS | 30.0% | |
! | AAATGAGCGAATTTGAGATA+AGG | - | chr3.1:55356769-55356788 | None:intergenic | 30.0% |
! | ATGAATCGATTGTTTCTTCT+GGG | - | chr3.1:55356705-55356724 | None:intergenic | 30.0% |
! | CAACGATTGTTACGATTTTA+GGG | - | chr3.1:55357197-55357216 | None:intergenic | 30.0% |
! | CCATTAATTTGAGAAGAATC+AGG | - | chr3.1:55356265-55356284 | None:intergenic | 30.0% |
! | TCAACGATTGTTACGATTTT+AGG | - | chr3.1:55357198-55357217 | None:intergenic | 30.0% |
! | TCGTCTTGTTCATACTTTAA+TGG | + | chr3.1:55356531-55356550 | MS.gene008246:CDS | 30.0% |
!! | AATAATGGGTGTCTTATGTT+AGG | + | chr3.1:55357588-55357607 | MS.gene008246:CDS | 30.0% |
!! | ATAATGGGTGTCTTATGTTA+GGG | + | chr3.1:55357589-55357608 | MS.gene008246:CDS | 30.0% |
!!! | AGAGTTCACGTTATTGATTT+TGG | + | chr3.1:55356832-55356851 | MS.gene008246:CDS | 30.0% |
AAGTTTCATGTCTTTCAACC+CGG | - | chr3.1:55357440-55357459 | None:intergenic | 35.0% | |
AATGTAAAGCTTCGGTAAAC+CGG | - | chr3.1:55357257-55357276 | None:intergenic | 35.0% | |
ACCCAACTGATCTATATTCA+TGG | + | chr3.1:55356212-55356231 | MS.gene008246:CDS | 35.0% | |
ACCCATGAATATAGATCAGT+TGG | - | chr3.1:55356217-55356236 | None:intergenic | 35.0% | |
AGTTTATTCGATTCACTGGA+GGG | + | chr3.1:55357285-55357304 | MS.gene008246:CDS | 35.0% | |
ATCAATAACGTGAACTCTTC+CGG | - | chr3.1:55356830-55356849 | None:intergenic | 35.0% | |
ATGAAACTTTGACTCAATGG+CGG | + | chr3.1:55357451-55357470 | MS.gene008246:CDS | 35.0% | |
CCCAACTGATCTATATTCAT+GGG | + | chr3.1:55356213-55356232 | MS.gene008246:CDS | 35.0% | |
CCCATGAATATAGATCAGTT+GGG | - | chr3.1:55356216-55356235 | None:intergenic | 35.0% | |
CTTGTTGATACACAAGAAAC+AGG | + | chr3.1:55356505-55356524 | MS.gene008246:CDS | 35.0% | |
GAACAAGAAGCGAATCATAA+CGG | + | chr3.1:55357216-55357235 | MS.gene008246:CDS | 35.0% | |
GAACAGTATCAGAAGAAAGA+TGG | - | chr3.1:55356186-55356205 | None:intergenic | 35.0% | |
GACATGAAACTTTGACTCAA+TGG | + | chr3.1:55357448-55357467 | MS.gene008246:CDS | 35.0% | |
TGATGTCAGAGATTTATCTC+GGG | + | chr3.1:55357376-55357395 | MS.gene008246:CDS | 35.0% | |
TTCTCAAATTAATGGCCCTT+TGG | + | chr3.1:55356270-55356289 | MS.gene008246:CDS | 35.0% | |
! | GATGAATCGATTGTTTCTTC+TGG | - | chr3.1:55356706-55356725 | None:intergenic | 35.0% |
!! | ACTTTGTTAGCTTTGTTTGC+TGG | + | chr3.1:55357540-55357559 | MS.gene008246:CDS | 35.0% |
AAAGCTTGAACAGCTTGAGA+TGG | + | chr3.1:55356129-55356148 | MS.gene008246:CDS | 40.0% | |
AAGAACCCAAAGAAGCCAAA+GGG | - | chr3.1:55356288-55356307 | None:intergenic | 40.0% | |
AATATACTTGAGATCCGACC+CGG | + | chr3.1:55357075-55357094 | MS.gene008246:CDS | 40.0% | |
AATTCAAACTCGAACTCGAC+CGG | + | chr3.1:55357327-55357346 | MS.gene008246:CDS | 40.0% | |
AGAACTTTCTCAACTGAACC+GGG | - | chr3.1:55357153-55357172 | None:intergenic | 40.0% | |
CTCGAGTTTATTCGATTCAC+TGG | + | chr3.1:55357281-55357300 | MS.gene008246:CDS | 40.0% | |
GAACAGCTTGAGATGGTTAT+GGG | + | chr3.1:55356136-55356155 | MS.gene008246:CDS | 40.0% | |
GAAGTGCATGCGAAGAATTT+CGG | - | chr3.1:55356734-55356753 | None:intergenic | 40.0% | |
GACATCAACAAATCCTGACT+CGG | - | chr3.1:55357363-55357382 | None:intergenic | 40.0% | |
GAGAACTTTCTCAACTGAAC+CGG | - | chr3.1:55357154-55357173 | None:intergenic | 40.0% | |
GAGTTTATTCGATTCACTGG+AGG | + | chr3.1:55357284-55357303 | MS.gene008246:CDS | 40.0% | |
GCACTTGCAAGAAGAATCTA+CGG | + | chr3.1:55356676-55356695 | MS.gene008246:CDS | 40.0% | |
GCATTTGAACCCAAATGAAC+CGG | - | chr3.1:55357504-55357523 | None:intergenic | 40.0% | |
GGTCGGATCTCAAGTATATT+CGG | - | chr3.1:55357075-55357094 | None:intergenic | 40.0% | |
GTCGGATCTCAAGTATATTC+GGG | - | chr3.1:55357074-55357093 | None:intergenic | 40.0% | |
GTCTTAAACAAGGGATGCAA+TGG | + | chr3.1:55356854-55356873 | MS.gene008246:CDS | 40.0% | |
GTTAGCAGCATTAGGTTACA+AGG | + | chr3.1:55356075-55356094 | MS.gene008246:CDS | 40.0% | |
TATGATCTTAGCGCTATTCC+TGG | + | chr3.1:55356355-55356374 | MS.gene008246:CDS | 40.0% | |
TGAACAGCTTGAGATGGTTA+TGG | + | chr3.1:55356135-55356154 | MS.gene008246:CDS | 40.0% | |
TGTGTATCAACAAGAACCAC+CGG | - | chr3.1:55356499-55356518 | None:intergenic | 40.0% | |
TTATGTTAGGGTGGCATACA+AGG | + | chr3.1:55357601-55357620 | MS.gene008246:CDS | 40.0% | |
TTCACTGGAGGGTTCAAATT+CGG | + | chr3.1:55357296-55357315 | MS.gene008246:CDS | 40.0% | |
! | AATGAAGACTTGGTCTGAAC+CGG | + | chr3.1:55356426-55356445 | MS.gene008246:CDS | 40.0% |
!! | CATCATTGAAAGTGCTGTTG+AGG | - | chr3.1:55356327-55356346 | None:intergenic | 40.0% |
!! | TTGTTAGCTTTGTTTGCTGG+TGG | + | chr3.1:55357543-55357562 | MS.gene008246:CDS | 40.0% |
ACCGATGCTTTGCAACAAGT+GGG | + | chr3.1:55356964-55356983 | MS.gene008246:CDS | 45.0% | |
ATGGGTAGTGCTCAAGAAGA+AGG | + | chr3.1:55356154-55356173 | MS.gene008246:CDS | 45.0% | |
ATGGGTGTCTTATGTTAGGG+TGG | + | chr3.1:55357592-55357611 | MS.gene008246:CDS | 45.0% | |
ATTCAAACTCGAACTCGACC+GGG | + | chr3.1:55357328-55357347 | MS.gene008246:CDS | 45.0% | |
CAAGGTTCGTTCTTCAGACA+TGG | + | chr3.1:55356093-55356112 | MS.gene008246:CDS | 45.0% | |
CCAAGTCTTCATTCGCTTAG+CGG | - | chr3.1:55356419-55356438 | None:intergenic | 45.0% | |
GAAGAACCCAAAGAAGCCAA+AGG | - | chr3.1:55356289-55356308 | None:intergenic | 45.0% | |
GACGAGTTGTTAGCAGCATT+AGG | + | chr3.1:55356067-55356086 | MS.gene008246:CDS | 45.0% | |
GAGACAGATATGTAACGTGG+TGG | + | chr3.1:55357398-55357417 | MS.gene008246:CDS | 45.0% | |
GGTGTTCAGTTCGAATTTCG+TGG | + | chr3.1:55357018-55357037 | MS.gene008246:CDS | 45.0% | |
GTAAACCGGTCTACGAAAAC+CGG | - | chr3.1:55357243-55357262 | None:intergenic | 45.0% | |
GTTAACAGCAACAGCTTCAC+CGG | - | chr3.1:55357097-55357116 | None:intergenic | 45.0% | |
TACCGATGCTTTGCAACAAG+TGG | + | chr3.1:55356963-55356982 | MS.gene008246:CDS | 45.0% | |
TCACTGGAGGGTTCAAATTC+GGG | + | chr3.1:55357297-55357316 | MS.gene008246:CDS | 45.0% | |
TCTTAGCGCTATTCCTGGAA+TGG | + | chr3.1:55356360-55356379 | MS.gene008246:CDS | 45.0% | |
TGCAAGTGCTTGAGCGAAAT+AGG | - | chr3.1:55356665-55356684 | None:intergenic | 45.0% | |
TGTAACGTGGTGGCTTATGA+AGG | + | chr3.1:55357408-55357427 | MS.gene008246:CDS | 45.0% | |
TTAACAGCAACAGCTTCACC+GGG | - | chr3.1:55357096-55357115 | None:intergenic | 45.0% | |
! | AATGGCCCTTTGGCTTCTTT+GGG | + | chr3.1:55356280-55356299 | MS.gene008246:CDS | 45.0% |
! | CACTCATTGCTACTTCTGCT+TGG | + | chr3.1:55357625-55357644 | MS.gene008246:CDS | 45.0% |
! | TAATGGCCCTTTGGCTTCTT+TGG | + | chr3.1:55356279-55356298 | MS.gene008246:CDS | 45.0% |
! | TGTTTTCTTCCTGAGGTGGT+GGG | - | chr3.1:55356393-55356412 | None:intergenic | 45.0% |
!! | AGAAGCGAATCATAACGGAC+CGG | + | chr3.1:55357221-55357240 | MS.gene008246:CDS | 45.0% |
!! | TGCTGGTGGTGATGGATATA+GGG | + | chr3.1:55357557-55357576 | MS.gene008246:CDS | 45.0% |
!! | TGGTGATGGATATAGGGTTG+AGG | + | chr3.1:55357563-55357582 | MS.gene008246:CDS | 45.0% |
!! | TTGCTGGTGGTGATGGATAT+AGG | + | chr3.1:55357556-55357575 | MS.gene008246:CDS | 45.0% |
AGGGTTGAGTTCAGTGAGCA+TGG | - | chr3.1:55356245-55356264 | None:intergenic | 50.0% | |
AGTCTTCATTCGCTTAGCGG+CGG | - | chr3.1:55356416-55356435 | None:intergenic | 50.0% | |
ATGCTTTGCAACAAGTGGGC+TGG | + | chr3.1:55356968-55356987 | MS.gene008246:CDS | 50.0% | |
CATACTATGTTAGCCCGACC+CGG | + | chr3.1:55357132-55357151 | MS.gene008246:CDS | 50.0% | |
CCGCTAAGCGAATGAAGACT+TGG | + | chr3.1:55356416-55356435 | MS.gene008246:CDS | 50.0% | |
CGGGAGACAGATATGTAACG+TGG | + | chr3.1:55357395-55357414 | MS.gene008246:CDS | 50.0% | |
CTTTCTCAACTGAACCGGGT+CGG | - | chr3.1:55357149-55357168 | None:intergenic | 50.0% | |
CTTTGACTCAATGGCGGTCT+AGG | + | chr3.1:55357457-55357476 | MS.gene008246:CDS | 50.0% | |
TGGCTTATGAAGGAGTGGAC+CGG | + | chr3.1:55357418-55357437 | MS.gene008246:CDS | 50.0% | |
TTTCTCAACTGAACCGGGTC+GGG | - | chr3.1:55357148-55357167 | None:intergenic | 50.0% | |
! | ACTCAATGGCGGTCTAGGAT+GGG | + | chr3.1:55357462-55357481 | MS.gene008246:CDS | 50.0% |
! | GCACAGCTTGCTCAGACAAT+CGG | + | chr3.1:55356997-55357016 | MS.gene008246:CDS | 50.0% |
! | GCCCACTTGTTGCAAAGCAT+CGG | - | chr3.1:55356968-55356987 | None:intergenic | 50.0% |
! | GGGTTCGAACCGGTTCATTT+GGG | + | chr3.1:55357492-55357511 | MS.gene008246:CDS | 50.0% |
! | GTGTTTTCTTCCTGAGGTGG+TGG | - | chr3.1:55356394-55356413 | None:intergenic | 50.0% |
! | TGGGTTCGAACCGGTTCATT+TGG | + | chr3.1:55357491-55357510 | MS.gene008246:CDS | 50.0% |
!! | GCTTTGTTTGCTGGTGGTGA+TGG | + | chr3.1:55357549-55357568 | MS.gene008246:CDS | 50.0% |
!! | GGTGGTGGAGAATACAAGAC+CGG | + | chr3.1:55356477-55356496 | MS.gene008246:CDS | 50.0% |
AAACTCGAACTCGACCGGGT+TGG | + | chr3.1:55357332-55357351 | MS.gene008246:CDS | 55.0% | |
AACGTGAACTCTTCCGGCAC+CGG | - | chr3.1:55356824-55356843 | None:intergenic | 55.0% | |
AACTCGAACTCGACCGGGTT+GGG | + | chr3.1:55357333-55357352 | MS.gene008246:CDS | 55.0% | |
ACGTTCCGGTTAACCGGCAT+CGG | + | chr3.1:55356922-55356941 | MS.gene008246:CDS | 55.0% | |
CCTCCTACGTTCCGGTTAAC+CGG | + | chr3.1:55356916-55356935 | MS.gene008246:CDS | 55.0% | |
CGTGGTGGCTTATGAAGGAG+TGG | + | chr3.1:55357413-55357432 | MS.gene008246:CDS | 55.0% | |
CTTGTATTCTCCACCACCGC+CGG | - | chr3.1:55356475-55356494 | None:intergenic | 55.0% | |
GACTCAATGGCGGTCTAGGA+TGG | + | chr3.1:55357461-55357480 | MS.gene008246:CDS | 55.0% | |
GCTATTCTCGAAGCCTTCGC+CGG | + | chr3.1:55356802-55356821 | MS.gene008246:CDS | 55.0% | |
GGCTTATGAAGGAGTGGACC+GGG | + | chr3.1:55357419-55357438 | MS.gene008246:CDS | 55.0% | |
GGTGGAGAATACAAGACCGG+TGG | + | chr3.1:55356480-55356499 | MS.gene008246:CDS | 55.0% | |
TTGGTCTGAACCGGAACCAG+CGG | + | chr3.1:55356435-55356454 | MS.gene008246:CDS | 55.0% | |
! | ATGCCGGTTAACCGGAACGT+AGG | - | chr3.1:55356922-55356941 | None:intergenic | 55.0% |
! | GCGGTGTTTTCTTCCTGAGG+TGG | - | chr3.1:55356397-55356416 | None:intergenic | 55.0% |
! | GGTCTAGGATGGGTTCAGCT+GGG | + | chr3.1:55357472-55357491 | MS.gene008246:CDS | 55.0% |
!! | ACGGACCGGTTTTCGTAGAC+CGG | + | chr3.1:55357235-55357254 | MS.gene008246:CDS | 55.0% |
CAGCAACAGCTTCACCGGGT+CGG | - | chr3.1:55357092-55357111 | None:intergenic | 60.0% | |
CCGGTTAACCGGAACGTAGG+AGG | - | chr3.1:55356919-55356938 | None:intergenic | 60.0% | |
GGGTTCAGCTGGGTTCGAAC+CGG | + | chr3.1:55357482-55357501 | MS.gene008246:CDS | 60.0% | |
GGTGGGTATGCAGCCATTCC+AGG | - | chr3.1:55356376-55356395 | None:intergenic | 60.0% | |
! | CGGTCTAGGATGGGTTCAGC+TGG | + | chr3.1:55357471-55357490 | MS.gene008246:CDS | 60.0% |
! | GCATCGGTATTGTCCGCCTG+CGG | - | chr3.1:55356952-55356971 | None:intergenic | 60.0% |
! | GCGGCGGTGTTTTCTTCCTG+AGG | - | chr3.1:55356400-55356419 | None:intergenic | 60.0% |
!! | CTGACTCGGTGAACCCAACC+CGG | - | chr3.1:55357349-55357368 | None:intergenic | 60.0% |
AGCGGTGGCGATGTCACCAC+CGG | + | chr3.1:55356453-55356472 | MS.gene008246:CDS | 65.0% | |
GCCAGCGCTTATGCAAGCGC+TGG | + | chr3.1:55356876-55356895 | MS.gene008246:CDS | 65.0% | |
GCCAGCGCTTGCATAAGCGC+TGG | - | chr3.1:55356880-55356899 | None:intergenic | 65.0% | |
GGCTGCATACCCACCACCTC+AGG | + | chr3.1:55356381-55356400 | MS.gene008246:CDS | 65.0% | |
GTATTCTCCACCACCGCCGG+TGG | - | chr3.1:55356472-55356491 | None:intergenic | 65.0% | |
GTCTGAACCGGAACCAGCGG+TGG | + | chr3.1:55356438-55356457 | MS.gene008246:CDS | 65.0% | |
TCGGTATTGTCCGCCTGCGG+CGG | - | chr3.1:55356949-55356968 | None:intergenic | 65.0% | |
! | CGGGTTGGGTTCACCGAGTC+AGG | + | chr3.1:55357347-55357366 | MS.gene008246:CDS | 65.0% |
! | GCGGTCCGATGCCGGTTAAC+CGG | - | chr3.1:55356930-55356949 | None:intergenic | 65.0% |
!! | AACTCTTCCGGCACCGGCGA+AGG | - | chr3.1:55356818-55356837 | None:intergenic | 65.0% |
!! | CAAGCGCTGGCATTACGCCC+CGG | + | chr3.1:55356889-55356908 | MS.gene008246:CDS | 65.0% |
!! | GACATCGCCACCGCTGGTTC+CGG | - | chr3.1:55356448-55356467 | None:intergenic | 65.0% |
CCGGAACGTAGGAGGACCGC+CGG | - | chr3.1:55356911-55356930 | None:intergenic | 70.0% | |
CCGGCGGTCCTCCTACGTTC+CGG | + | chr3.1:55356908-55356927 | MS.gene008246:CDS | 70.0% | |
CGGAACGTAGGAGGACCGCC+GGG | - | chr3.1:55356910-55356929 | None:intergenic | 70.0% | |
CTCGAAGCCTTCGCCGGTGC+CGG | + | chr3.1:55356808-55356827 | MS.gene008246:CDS | 70.0% | |
GATGTCACCACCGGCGGTGG+TGG | + | chr3.1:55356462-55356481 | MS.gene008246:CDS | 70.0% | |
GGAACGTAGGAGGACCGCCG+GGG | - | chr3.1:55356909-55356928 | None:intergenic | 70.0% | |
GGTGGCGATGTCACCACCGG+CGG | + | chr3.1:55356456-55356475 | MS.gene008246:CDS | 70.0% | |
GGTGGTGACATCGCCACCGC+TGG | - | chr3.1:55356454-55356473 | None:intergenic | 70.0% | |
GGCGATGTCACCACCGGCGG+TGG | + | chr3.1:55356459-55356478 | MS.gene008246:CDS | 75.0% | |
! | AACCGGCATCGGACCGCCGC+AGG | + | chr3.1:55356933-55356952 | MS.gene008246:CDS | 75.0% |
! | GCGCTGGCATTACGCCCCGG+CGG | + | chr3.1:55356892-55356911 | MS.gene008246:CDS | 75.0% |
! | CGCCTGCGGCGGTCCGATGC+CGG | - | chr3.1:55356938-55356957 | None:intergenic | 80.0% |
!! | CGGCATCGGACCGCCGCAGG+CGG | + | chr3.1:55356936-55356955 | MS.gene008246:CDS | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.1 | gene | 55356064 | 55357674 | 55356064 | ID=MS.gene008246 |
chr3.1 | mRNA | 55356064 | 55357674 | 55356064 | ID=MS.gene008246.t1;Parent=MS.gene008246 |
chr3.1 | exon | 55356064 | 55357674 | 55356064 | ID=MS.gene008246.t1.exon1;Parent=MS.gene008246.t1 |
chr3.1 | CDS | 55356064 | 55357674 | 55356064 | ID=cds.MS.gene008246.t1;Parent=MS.gene008246.t1 |
Gene Sequence |
Protein sequence |