AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene008341

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene008341.t1 MTR_3g064580 94.048 504 29 1 1 504 1 503 0.0 981
MS.gene008341.t1 MTR_5g076850 66.931 505 136 14 1 502 1 477 0.0 649
MS.gene008341.t1 MTR_2g064090 50.949 316 129 8 1 300 1 306 1.15e-91 284
MS.gene008341.t1 MTR_6g477900 75.309 162 39 1 1 162 1 161 2.61e-90 276
MS.gene008341.t1 MTR_5g014300 64.634 164 47 2 1 157 1 160 9.26e-72 232
MS.gene008341.t1 MTR_4g098630 53.368 193 75 4 1 180 1 191 6.04e-65 213
MS.gene008341.t1 MTR_8g076110 48.148 189 88 3 1 188 1 180 1.75e-61 204
MS.gene008341.t1 MTR_1g097300 60.494 162 62 2 8 169 21 180 7.62e-60 207
MS.gene008341.t1 MTR_5g069030 62.500 152 56 1 6 157 25 175 9.43e-60 208
MS.gene008341.t1 MTR_3g093040 57.962 157 65 1 1 157 103 258 1.27e-59 199
MS.gene008341.t1 MTR_3g093050 62.092 153 57 1 5 157 21 172 1.81e-59 206
MS.gene008341.t1 MTR_3g093050 62.092 153 57 1 5 157 21 172 2.66e-59 207
MS.gene008341.t1 MTR_0036s0150 60.123 163 61 3 8 169 7 166 1.61e-58 203
MS.gene008341.t1 MTR_4g036030 54.902 153 65 2 6 157 7 156 1.63e-58 197
MS.gene008341.t1 MTR_2g079990 56.604 159 66 2 1 159 11 166 2.26e-58 197
MS.gene008341.t1 MTR_4g101680 48.315 178 86 3 6 181 7 180 9.77e-58 196
MS.gene008341.t1 MTR_3g096140 54.321 162 72 2 8 169 9 168 1.38e-57 193
MS.gene008341.t1 MTR_1g090723 58.896 163 63 3 8 169 10 169 2.01e-57 201
MS.gene008341.t1 MTR_1g090723 58.896 163 63 3 8 169 10 169 2.17e-57 202
MS.gene008341.t1 MTR_1g096430 56.494 154 63 2 5 157 6 156 2.35e-57 194
MS.gene008341.t1 MTR_1g090720 58.721 172 65 2 4 170 40 210 2.98e-57 198
MS.gene008341.t1 MTR_8g059170 56.875 160 66 2 1 159 9 166 9.00e-57 192
MS.gene008341.t1 MTR_3g096140 55.215 163 69 3 8 169 9 168 9.66e-57 193
MS.gene008341.t1 MTR_5g021710 52.866 157 70 2 5 160 7 160 1.01e-56 193
MS.gene008341.t1 MTR_2g062730 53.846 156 67 3 4 157 8 160 2.33e-56 192
MS.gene008341.t1 MTR_4g035590 49.721 179 74 5 6 174 8 180 2.83e-56 192
MS.gene008341.t1 MTR_3g088110 53.409 176 77 3 4 177 5 177 3.75e-56 189
MS.gene008341.t1 MTR_5g012080 54.839 155 64 4 6 157 7 158 7.53e-56 191
MS.gene008341.t1 MTR_7g005280 57.988 169 60 5 4 170 13 172 1.00e-55 187
MS.gene008341.t1 MTR_6g084430 56.442 163 64 3 6 168 5 160 1.06e-55 189
MS.gene008341.t1 MTR_1g090723 58.537 164 63 4 8 169 10 170 1.11e-55 197
MS.gene008341.t1 MTR_8g063550 52.071 169 79 2 1 169 1 167 1.90e-55 189
MS.gene008341.t1 MTR_8g063550 52.071 169 79 2 1 169 1 167 3.27e-55 192
MS.gene008341.t1 MTR_8g063550 52.071 169 79 2 1 169 1 167 3.89e-55 191
MS.gene008341.t1 MTR_2g080010 54.545 165 61 3 6 158 15 177 7.42e-55 188
MS.gene008341.t1 MTR_6g012670 55.128 156 67 2 6 160 20 173 1.15e-54 187
MS.gene008341.t1 MTR_4g108760 54.430 158 69 2 4 160 15 170 1.34e-54 187
MS.gene008341.t1 MTR_4g081870 52.830 159 70 3 2 157 5 161 4.06e-54 184
MS.gene008341.t1 MTR_5g041940 53.125 160 70 4 4 160 1 158 6.62e-54 182
MS.gene008341.t1 MTR_1g008740 56.051 157 62 4 5 158 12 164 9.82e-54 185
MS.gene008341.t1 MTR_1g008740 56.051 157 62 4 5 158 26 178 1.26e-53 185
MS.gene008341.t1 MTR_8g094580 45.833 216 94 6 4 199 5 217 1.56e-53 182
MS.gene008341.t1 MTR_2g079990 47.849 186 68 2 1 159 11 194 1.66e-53 185
MS.gene008341.t1 MTR_8g024480 49.693 163 69 3 6 157 15 175 1.83e-53 187
MS.gene008341.t1 MTR_7g085220 52.381 168 60 4 6 158 8 170 1.84e-53 184
MS.gene008341.t1 MTR_3g435150 56.494 154 64 2 6 158 16 167 2.23e-53 182
MS.gene008341.t1 MTR_6g032770 50.898 167 75 4 3 165 15 178 5.86e-53 184
MS.gene008341.t1 MTR_2g078700 57.051 156 62 3 6 158 23 176 7.74e-53 184
MS.gene008341.t1 MTR_3g109340 55.769 156 63 3 5 158 21 172 9.32e-53 182
MS.gene008341.t1 MTR_3g096920 52.000 175 72 4 4 169 5 176 3.50e-52 179
MS.gene008341.t1 MTR_3g109340 55.128 156 63 3 5 158 21 171 4.52e-52 181
MS.gene008341.t1 MTR_8g093580 49.112 169 84 2 1 169 1 167 6.59e-52 184
MS.gene008341.t1 MTR_2157s0010 51.829 164 66 4 6 158 8 169 8.25e-52 177
MS.gene008341.t1 MTR_6g011860 49.398 166 73 3 6 162 15 178 9.50e-52 181
MS.gene008341.t1 MTR_7g085260 41.667 240 113 6 4 236 15 234 1.59e-51 180
MS.gene008341.t1 MTR_2g064470 51.163 172 77 3 1 169 6 173 2.60e-51 177
MS.gene008341.t1 MTR_4g134460 52.597 154 67 3 8 160 56 204 4.13e-51 180
MS.gene008341.t1 MTR_1g069805 54.487 156 62 3 4 157 8 156 7.71e-51 175
MS.gene008341.t1 MTR_2g086880 52.597 154 64 2 1 154 13 157 1.53e-50 181
MS.gene008341.t1 MTR_4g089135 48.168 191 70 5 6 169 15 203 1.84e-50 176
MS.gene008341.t1 MTR_2g086880 53.247 154 63 3 1 154 13 157 2.22e-50 182
MS.gene008341.t1 MTR_3g070030 49.693 163 78 2 4 164 17 177 2.75e-50 176
MS.gene008341.t1 MTR_8g467490 40.175 229 118 6 8 225 16 236 3.57e-50 177
MS.gene008341.t1 MTR_7g097090 54.545 154 61 3 4 155 8 154 4.83e-50 173
MS.gene008341.t1 MTR_3g096920 54.967 151 62 3 4 154 5 149 1.97e-49 173
MS.gene008341.t1 MTR_7g100990 49.686 159 73 5 4 157 9 165 5.00e-49 172
MS.gene008341.t1 MTR_2g093810 51.613 155 68 4 5 154 13 165 1.01e-48 171
MS.gene008341.t1 MTR_5g040420 43.915 189 92 6 8 184 16 202 6.43e-48 171
MS.gene008341.t1 MTR_3g096140 52.349 149 67 3 22 169 2 147 3.35e-47 167
MS.gene008341.t1 MTR_3g116070 59.542 131 48 4 6 133 23 151 1.05e-45 164
MS.gene008341.t1 MTR_7g011130 54.962 131 57 1 4 134 17 145 1.54e-45 163
MS.gene008341.t1 MTR_2g068880 47.590 166 72 4 8 159 24 188 4.04e-45 161
MS.gene008341.t1 MTR_2g068920 45.402 174 80 3 8 167 23 195 1.93e-44 159
MS.gene008341.t1 MTR_5g090970 48.447 161 70 4 8 157 20 178 1.45e-43 157
MS.gene008341.t1 MTR_4g075980 46.341 164 75 4 8 168 17 170 1.87e-43 156
MS.gene008341.t1 MTR_5g090970 47.205 161 71 4 8 157 20 177 9.22e-43 154
MS.gene008341.t1 MTR_7g011120 53.435 131 59 1 4 134 6 134 1.66e-42 154
MS.gene008341.t1 MTR_3g070040 44.970 169 85 3 4 169 6 169 3.16e-42 154
MS.gene008341.t1 MTR_8g023840 45.405 185 85 5 6 184 11 185 7.06e-42 154
MS.gene008341.t1 MTR_8g099750 49.677 155 68 3 6 154 14 164 1.48e-41 149
MS.gene008341.t1 MTR_8g023860 44.565 184 92 4 6 186 12 188 9.12e-39 146
MS.gene008341.t1 MTR_3g098810 47.826 161 71 4 6 157 14 170 2.28e-38 140
MS.gene008341.t1 MTR_3g098810 52.273 132 55 2 6 133 14 141 1.55e-37 136
MS.gene008341.t1 MTR_8g023900 45.625 160 77 6 5 160 11 164 1.98e-36 141
MS.gene008341.t1 MTR_8g023900 42.424 165 79 6 1 157 184 340 2.45e-33 132
MS.gene008341.t1 MTR_4g052620 33.333 249 146 7 6 236 5 251 9.78e-36 134
MS.gene008341.t1 MTR_2g086690 41.772 158 81 5 7 155 5 160 9.77e-35 131
MS.gene008341.t1 MTR_8g023930 37.561 205 112 5 6 207 24 215 1.43e-34 135
MS.gene008341.t1 MTR_7g105170 35.961 203 110 8 6 190 4 204 2.94e-34 130
MS.gene008341.t1 MTR_8g094580 42.675 157 69 5 63 199 8 163 8.80e-32 122
MS.gene008341.t1 MTR_4g094302 37.107 159 83 4 6 157 11 159 1.88e-29 115
MS.gene008341.t1 MTR_4g094302 43.846 130 61 3 6 133 11 130 2.28e-29 113
MS.gene008341.t1 MTR_8g023880 39.766 171 75 7 4 157 5 164 1.94e-27 111
MS.gene008341.t1 MTR_7g070140 59.259 81 31 2 56 134 12 92 1.48e-25 102
MS.gene008341.t1 MTR_8g093790 37.662 154 73 6 4 157 8 138 8.49e-21 90.5
MS.gene008341.t1 MTR_3g096400 30.556 180 106 5 4 172 5 176 9.88e-20 88.2
MS.gene008341.t1 MTR_7g083330 31.977 172 110 4 4 174 16 181 1.25e-18 84.3
MS.gene008341.t1 MTR_7g083360 32.692 156 97 5 2 156 6 154 5.36e-17 78.6
MS.gene008341.t1 MTR_7g083370 32.061 131 85 3 6 135 10 137 1.13e-15 74.3
MS.gene008341.t1 MTR_7g070150 57.377 61 21 3 98 157 1 57 1.23e-15 72.8
MS.gene008341.t1 MTR_1g087190 58.696 46 18 1 8 52 7 52 2.00e-13 65.1
MS.gene008341.t1 MTR_7g116460 31.250 160 91 9 12 161 11 161 2.17e-11 63.9
MS.gene008341.t1 MTR_1g045470 32.903 155 88 7 14 159 13 160 9.10e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene008341.t1 AT1G65910 48.915 507 206 15 1 502 1 459 7.54e-149 440
MS.gene008341.t1 AT5G17260 56.902 297 97 7 1 289 1 274 5.20e-109 333
MS.gene008341.t1 AT3G03200 50.142 353 138 9 1 343 1 325 2.15e-106 326
MS.gene008341.t1 AT3G17730 76.543 162 37 1 1 162 1 161 2.52e-92 282
MS.gene008341.t1 AT1G54330 72.892 166 41 1 1 166 1 162 7.09e-83 259
MS.gene008341.t1 AT4G17980 64.375 160 54 2 1 157 1 160 1.30e-69 225
MS.gene008341.t1 AT4G17980 64.375 160 54 2 1 157 1 160 1.43e-69 224
MS.gene008341.t1 AT5G46590 59.006 161 65 1 1 160 1 161 5.12e-68 221
MS.gene008341.t1 AT1G32510 54.839 186 70 2 1 172 1 186 6.74e-65 212
MS.gene008341.t1 AT3G10500 63.030 165 59 2 5 169 8 170 7.86e-65 220
MS.gene008341.t1 AT5G04410 63.473 167 57 3 4 169 7 170 8.75e-65 220
MS.gene008341.t1 AT3G10480 59.412 170 68 1 1 170 22 190 1.28e-63 214
MS.gene008341.t1 AT5G46590 63.830 141 46 2 1 140 1 137 2.84e-63 208
MS.gene008341.t1 AT1G33060 60.784 153 59 1 5 157 23 174 7.27e-63 217
MS.gene008341.t1 AT1G33060 60.784 153 59 1 5 157 23 174 7.60e-63 217
MS.gene008341.t1 AT3G10490 59.639 166 66 1 5 170 26 190 1.96e-62 204
MS.gene008341.t1 AT1G34190 60.000 165 58 3 8 169 18 177 4.64e-62 213
MS.gene008341.t1 AT4G35580 61.438 153 58 1 5 157 8 159 7.23e-62 211
MS.gene008341.t1 AT4G35580 61.438 153 58 1 5 157 8 159 7.97e-62 211
MS.gene008341.t1 AT4G35580 61.438 153 58 1 5 157 8 159 8.14e-62 211
MS.gene008341.t1 AT3G10480 58.824 170 68 2 1 170 22 189 1.16e-61 209
MS.gene008341.t1 AT3G10490 59.281 167 67 1 4 170 25 190 1.23e-60 206
MS.gene008341.t1 AT4G27410 58.491 159 63 2 1 159 9 164 2.21e-60 201
MS.gene008341.t1 AT1G34180 57.576 165 62 3 8 169 18 177 1.16e-59 204
MS.gene008341.t1 AT1G33280 54.118 170 71 4 6 174 8 171 2.70e-59 198
MS.gene008341.t1 AT3G15500 59.119 159 62 2 1 159 9 164 8.57e-59 197
MS.gene008341.t1 AT1G34180 57.576 165 62 3 8 169 18 177 1.04e-58 204
MS.gene008341.t1 AT3G18400 56.774 155 63 2 6 160 5 155 1.66e-58 196
MS.gene008341.t1 AT5G66300 49.198 187 86 3 4 189 10 188 1.67e-58 196
MS.gene008341.t1 AT4G10350 50.000 190 89 5 6 192 9 195 1.72e-58 197
MS.gene008341.t1 AT5G24590 54.938 162 71 2 1 161 8 168 2.20e-58 200
MS.gene008341.t1 AT1G12260 46.893 177 90 2 6 181 7 180 4.28e-58 196
MS.gene008341.t1 AT3G10480 50.246 203 67 2 1 170 22 223 6.36e-58 201
MS.gene008341.t1 AT2G18060 48.619 181 83 3 1 180 4 175 6.49e-58 197
MS.gene008341.t1 AT2G18060 48.619 181 83 3 1 180 4 175 6.49e-58 197
MS.gene008341.t1 AT1G12260 46.893 177 90 2 6 181 7 180 6.68e-58 197
MS.gene008341.t1 AT4G36160 42.661 218 116 4 4 220 8 217 1.06e-57 196
MS.gene008341.t1 AT4G36160 42.661 218 116 4 4 220 8 217 1.06e-57 196
MS.gene008341.t1 AT4G36160 42.661 218 116 4 4 220 12 221 1.25e-57 196
MS.gene008341.t1 AT1G52890 52.809 178 81 2 1 178 9 183 1.62e-57 194
MS.gene008341.t1 AT1G71930 44.595 222 107 5 5 225 8 214 1.91e-57 194
MS.gene008341.t1 AT1G71930 44.595 222 107 5 5 225 8 214 1.91e-57 194
MS.gene008341.t1 AT4G27410 54.023 174 64 3 1 159 9 181 4.89e-57 192
MS.gene008341.t1 AT2G24430 58.974 156 58 3 5 158 15 166 6.38e-57 192
MS.gene008341.t1 AT2G24430 58.974 156 58 3 5 158 15 166 6.38e-57 192
MS.gene008341.t1 AT5G39610 44.068 236 124 5 4 238 18 246 7.90e-57 191
MS.gene008341.t1 AT1G62700 54.248 153 66 2 6 157 7 156 9.09e-57 194
MS.gene008341.t1 AT1G62700 54.248 153 66 2 6 157 7 156 9.09e-57 194
MS.gene008341.t1 AT1G34180 53.672 177 62 4 8 169 18 189 1.83e-56 195
MS.gene008341.t1 AT5G64060 51.479 169 80 2 1 169 1 167 1.37e-55 190
MS.gene008341.t1 AT1G34180 53.672 177 62 4 8 169 18 189 1.56e-55 196
MS.gene008341.t1 AT3G49530 53.797 158 71 2 5 161 12 168 3.04e-55 191
MS.gene008341.t1 AT3G49530 53.797 158 71 2 5 161 12 168 7.97e-55 191
MS.gene008341.t1 AT3G04070 52.000 175 69 5 5 166 9 181 1.15e-54 187
MS.gene008341.t1 AT5G62380 53.548 155 64 3 6 157 7 156 1.44e-54 187
MS.gene008341.t1 AT5G62380 53.548 155 64 3 6 157 7 156 1.44e-54 187
MS.gene008341.t1 AT1G69490 55.769 156 64 4 5 157 8 161 2.81e-54 184
MS.gene008341.t1 AT5G18270 57.051 156 63 3 4 157 19 172 3.37e-54 186
MS.gene008341.t1 AT5G07680 55.414 157 67 2 4 159 1 155 4.04e-54 185
MS.gene008341.t1 AT1G32770 49.390 164 69 3 6 157 16 177 4.13e-54 186
MS.gene008341.t1 AT5G07680 55.414 157 67 2 4 159 15 169 4.36e-54 185
MS.gene008341.t1 AT1G79580 53.846 156 66 3 4 157 15 166 4.53e-54 187
MS.gene008341.t1 AT1G79580 53.846 156 66 3 4 157 15 166 4.53e-54 187
MS.gene008341.t1 AT1G79580 53.846 156 66 3 4 157 15 166 4.53e-54 187
MS.gene008341.t1 AT1G79580 53.846 156 66 3 4 157 15 166 4.53e-54 187
MS.gene008341.t1 AT1G79580 53.846 156 66 3 4 157 15 166 4.53e-54 187
MS.gene008341.t1 AT3G29035 56.688 157 65 2 4 159 22 176 6.39e-54 184
MS.gene008341.t1 AT5G61430 55.128 156 67 2 4 158 14 167 9.34e-54 185
MS.gene008341.t1 AT5G18270 56.410 156 64 3 4 157 19 172 1.30e-53 184
MS.gene008341.t1 AT5G09330 53.254 169 77 2 1 169 1 167 1.32e-53 188
MS.gene008341.t1 AT5G09330 53.254 169 77 2 1 169 1 167 1.32e-53 188
MS.gene008341.t1 AT5G09330 53.254 169 77 2 1 169 1 167 1.32e-53 188
MS.gene008341.t1 AT5G09330 53.254 169 77 2 1 169 1 167 1.32e-53 188
MS.gene008341.t1 AT5G09330 53.254 169 77 2 1 169 1 167 1.32e-53 188
MS.gene008341.t1 AT5G53950 56.875 160 64 4 6 162 17 174 1.86e-53 185
MS.gene008341.t1 AT1G01720 56.688 157 62 4 4 157 5 158 3.40e-53 182
MS.gene008341.t1 AT3G12977 51.572 159 75 1 1 159 13 169 3.94e-53 181
MS.gene008341.t1 AT3G15170 54.375 160 68 4 6 162 20 177 4.54e-53 182
MS.gene008341.t1 AT3G61910 47.399 173 70 4 6 161 11 179 8.83e-53 182
MS.gene008341.t1 AT3G04070 47.644 191 69 5 5 166 9 197 3.28e-52 181
MS.gene008341.t1 AT2G46770 49.102 167 68 3 6 157 16 180 5.22e-52 181
MS.gene008341.t1 AT1G77450 54.321 162 69 3 2 161 6 164 5.93e-52 177
MS.gene008341.t1 AT2G33480 53.896 154 65 2 4 157 13 160 8.50e-52 177
MS.gene008341.t1 AT2G02450 51.948 154 68 3 8 160 53 201 8.69e-52 182
MS.gene008341.t1 AT2G02450 52.903 155 65 4 8 160 53 201 1.01e-51 181
MS.gene008341.t1 AT5G08790 53.704 162 68 4 4 161 5 163 1.86e-51 177
MS.gene008341.t1 AT2G33480 53.247 154 64 2 4 157 13 158 5.69e-51 175
MS.gene008341.t1 AT1G56010 54.268 164 66 5 1 159 14 173 6.22e-51 177
MS.gene008341.t1 AT1G26870 32.558 387 219 9 6 378 16 374 7.84e-51 179
MS.gene008341.t1 AT3G04060 55.769 156 65 3 4 157 18 171 1.08e-50 177
MS.gene008341.t1 AT1G76420 53.846 156 66 3 5 158 21 172 2.68e-50 176
MS.gene008341.t1 AT5G13180 55.769 156 60 3 4 157 12 160 2.90e-50 173
MS.gene008341.t1 AT5G39820 42.411 224 97 6 8 201 22 243 5.99e-50 174
MS.gene008341.t1 AT1G61110 49.419 172 73 3 6 165 16 185 6.45e-50 174
MS.gene008341.t1 AT1G32870 57.576 165 66 3 6 169 10 171 1.39e-49 178
MS.gene008341.t1 AT5G63790 53.125 160 68 4 2 157 46 202 1.93e-49 172
MS.gene008341.t1 AT1G32870 57.576 165 66 3 6 169 10 171 1.97e-49 178
MS.gene008341.t1 AT3G15510 53.750 160 60 3 10 157 21 178 2.00e-49 174
MS.gene008341.t1 AT3G44290 51.235 162 63 4 8 163 16 167 2.25e-49 169
MS.gene008341.t1 AT5G63790 53.125 160 68 4 2 157 56 212 2.43e-49 172
MS.gene008341.t1 AT1G32870 57.576 165 66 3 6 169 46 207 3.27e-49 178
MS.gene008341.t1 AT5G22290 50.000 154 69 2 1 154 16 161 3.27e-49 173
MS.gene008341.t1 AT3G44290 51.235 162 63 4 8 163 16 167 1.11e-48 171
MS.gene008341.t1 AT2G43000 52.632 152 70 1 8 159 20 169 1.16e-48 169
MS.gene008341.t1 AT2G27300 50.633 158 69 2 1 158 9 157 2.88e-48 170
MS.gene008341.t1 AT2G17040 51.220 164 67 5 8 168 8 161 5.04e-48 167
MS.gene008341.t1 AT4G28530 52.047 171 55 7 6 157 10 172 8.28e-47 167
MS.gene008341.t1 AT1G52880 52.439 164 65 5 10 162 21 182 3.71e-44 159
MS.gene008341.t1 AT5G04395 48.630 146 61 2 2 133 24 169 3.34e-39 141
MS.gene008341.t1 AT3G12910 44.643 168 74 5 8 159 23 187 2.02e-37 140
MS.gene008341.t1 AT4G10350 47.727 132 64 4 63 192 20 148 5.87e-35 133
MS.gene008341.t1 AT5G61430 58.763 97 39 1 63 158 8 104 1.07e-33 129
MS.gene008341.t1 AT3G12977 54.639 97 44 0 63 159 20 116 1.26e-32 124
MS.gene008341.t1 AT4G01520 46.212 132 66 3 7 133 5 136 3.20e-31 123
MS.gene008341.t1 AT3G44350 39.610 154 89 3 9 158 8 161 4.86e-31 120
MS.gene008341.t1 AT5G22380 40.523 153 85 4 9 155 8 160 1.12e-30 119
MS.gene008341.t1 AT1G56010 53.704 108 44 3 55 159 2 106 1.77e-30 119
MS.gene008341.t1 AT4G01550 42.484 153 78 3 9 157 7 153 7.64e-30 122
MS.gene008341.t1 AT4G01540 45.385 130 66 3 9 133 7 136 1.97e-29 120
MS.gene008341.t1 AT4G01540 45.385 130 66 3 9 133 7 136 2.61e-29 119
MS.gene008341.t1 AT4G01540 45.385 130 66 3 9 133 7 136 2.84e-29 120
MS.gene008341.t1 AT4G01540 45.385 130 66 3 9 133 7 136 4.01e-29 120
MS.gene008341.t1 AT2G33480 54.737 95 42 1 63 157 10 103 4.71e-29 114
MS.gene008341.t1 AT4G28530 51.695 118 36 4 6 105 10 124 2.13e-28 115
MS.gene008341.t1 AT3G04420 37.821 156 89 3 7 160 4 153 6.24e-28 113
MS.gene008341.t1 AT3G44350 41.791 134 74 3 6 135 5 138 9.44e-28 109
MS.gene008341.t1 AT5G64530 42.424 132 60 4 4 133 1 118 2.92e-27 107
MS.gene008341.t1 AT3G04420 37.821 156 89 3 7 160 4 153 3.01e-27 112
MS.gene008341.t1 AT5G64530 42.424 132 60 4 4 133 1 118 3.45e-27 108
MS.gene008341.t1 AT1G02230 43.846 130 65 4 7 131 4 130 4.21e-26 109
MS.gene008341.t1 AT3G10490 56.667 90 38 1 81 170 2 90 1.29e-25 108
MS.gene008341.t1 AT3G10490 56.667 90 38 1 81 170 2 90 1.29e-25 108
MS.gene008341.t1 AT1G02250 37.662 154 81 6 7 154 4 148 1.32e-23 102
MS.gene008341.t1 AT1G02220 39.370 127 72 2 7 131 4 127 1.45e-22 100
MS.gene008341.t1 AT1G01010 36.943 157 79 5 9 154 6 153 1.43e-21 97.8
MS.gene008341.t1 AT2G43000 48.889 90 46 0 70 159 2 91 1.66e-21 92.8
MS.gene008341.t1 AT3G56530 33.117 154 97 3 4 155 50 199 1.97e-19 89.7
MS.gene008341.t1 AT2G18060 41.053 95 47 2 86 180 2 87 2.06e-19 89.0
MS.gene008341.t1 AT3G55210 34.356 163 88 4 6 155 11 167 2.45e-19 88.6
MS.gene008341.t1 AT5G14000 34.091 132 81 2 4 133 13 140 1.00e-18 83.6
MS.gene008341.t1 AT5G50820 35.821 134 72 4 4 133 15 138 3.58e-18 83.2
MS.gene008341.t1 AT5G14000 34.091 132 81 2 4 133 13 140 8.43e-18 82.4
MS.gene008341.t1 AT5G22290 47.059 68 29 1 87 154 2 62 5.32e-15 75.1
MS.gene008341.t1 AT3G04430 33.083 133 75 5 12 132 6 136 1.36e-13 70.1
MS.gene008341.t1 AT5G56620 28.972 214 97 11 4 183 41 233 5.73e-12 68.2
MS.gene008341.t1 AT5G56620 28.972 214 97 11 4 183 41 233 6.40e-12 67.8
MS.gene008341.t1 AT5G56620 26.316 285 142 13 4 241 41 304 1.03e-11 67.0

Find 125 sgRNAs with CRISPR-Local

Find 300 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTTCATCATTTCCCAATTA+TGG 0.131333 3.1:+53976573 MS.gene008341:CDS
AACACAAGATCAATTGAAAT+TGG 0.178255 3.1:+53977087 MS.gene008341:CDS
TTTCATTGCCTCCTGGATTT+AGG 0.185491 3.1:+53974878 MS.gene008341:CDS
CAATCCTTCTGCTGGCTTGC+AGG 0.208231 3.1:+53976078 MS.gene008341:CDS
ATTAGGTGTGGATCCATAAT+TGG 0.210005 3.1:-53976586 None:intergenic
TTGGTTTCTTTGTTGATATT+TGG 0.239893 3.1:-53977879 None:intergenic
TACCTCAAAAGAAAGATTAA+TGG 0.252239 3.1:+53974934 MS.gene008341:CDS
TATTAGTCCCATTCATGTTT+TGG 0.257396 3.1:-53976464 None:intergenic
ACATATTGCTCCCCAACTTT+TGG 0.262023 3.1:-53976312 None:intergenic
TCATCTATAAAATTCTCATT+AGG 0.282892 3.1:-53977951 None:intergenic
ATTATCAATGTTACCATCAT+TGG 0.297617 3.1:-53977898 None:intergenic
ATTTCAATTGATCTTGTGTT+TGG 0.306451 3.1:-53977084 None:intergenic
AAGATGACACGATTAGTTTC+AGG 0.307069 3.1:+53976829 MS.gene008341:CDS
GAGCAACAAAATCTGGATAT+TGG 0.309075 3.1:+53975906 MS.gene008341:CDS
CTATTGGTTCTTGACCCATT+TGG 0.316548 3.1:-53975884 None:intergenic
ATTGCTACCCGGAAAAGATT+TGG 0.323614 3.1:+53975826 MS.gene008341:CDS
TTGGGAAATGATGAAGATAT+TGG 0.325209 3.1:-53976567 None:intergenic
CTGTACTCTTCTTGAATATA+CGG 0.326332 3.1:-53976281 None:intergenic
ACCAATAGAGCAACAAAATC+TGG 0.328796 3.1:+53975899 MS.gene008341:CDS
AACATTGATAATTTCTCAAT+GGG 0.341635 3.1:+53977909 MS.gene008341:CDS
ACCTTGGATGGAGGGTAATT+AGG 0.353293 3.1:-53976603 None:intergenic
ACACAAGATCAATTGAAATT+GGG 0.359406 3.1:+53977088 MS.gene008341:CDS
TCACAAGGGATGATGGGATT+TGG 0.365857 3.1:+53976511 MS.gene008341:CDS
AAGCTTGAAATATCCTCAAT+TGG 0.369497 3.1:-53977666 None:intergenic
CATCTATAAAATTCTCATTA+GGG 0.392715 3.1:-53977950 None:intergenic
GCACCTGTTTCATTGCCTCC+TGG 0.396749 3.1:+53974871 MS.gene008341:CDS
CTCTTCCTCTATAGTAAACT+AGG 0.397058 3.1:-53975991 None:intergenic
CAGTGATTGCTCCAAAAGTT+GGG 0.399593 3.1:+53976301 MS.gene008341:CDS
AAATGAAACAGATATCTTGC+AGG 0.410733 3.1:+53976870 MS.gene008341:CDS
GGATCTTGATAATGATTTCA+AGG 0.412821 3.1:+53977110 MS.gene008341:CDS
CACTTGTAGAGATCAACTTC+AGG 0.419704 3.1:-53974982 None:intergenic
TTCTTTGCCTCCCTTGGAGG+TGG 0.430580 3.1:+53976771 MS.gene008341:CDS
TCAAAAGATTGTTCCAATTG+AGG 0.432130 3.1:+53977653 MS.gene008341:CDS
GGGAATGTCACAAGGGATGA+TGG 0.436835 3.1:+53976504 MS.gene008341:CDS
TTTCAAGCTTCAAAACAAAC+AGG 0.437336 3.1:+53977679 MS.gene008341:CDS
TGCGACTGAGAGATGGAAGT+TGG 0.439221 3.1:+53979424 MS.gene008341:CDS
GTAGAGAATTTGAGATGGGT+TGG 0.440025 3.1:+53977144 MS.gene008341:CDS
TTTGGATACTTCCTATCTCT+AGG 0.442345 3.1:-53975866 None:intergenic
AATCCAGGAGGCAATGAAAC+AGG 0.443707 3.1:-53974874 None:intergenic
GAAGGAAGAGATGAAGCTAT+AGG 0.448143 3.1:+53976402 MS.gene008341:CDS
ACAGTGATTGCTCCAAAAGT+TGG 0.449271 3.1:+53976300 MS.gene008341:CDS
TCAAACTACTCACATGCATT+TGG 0.457307 3.1:+53976937 MS.gene008341:CDS
TAACATTGATAATTTCTCAA+TGG 0.459092 3.1:+53977908 MS.gene008341:CDS
AAAACCCTAGTTTACTATAG+AGG 0.471807 3.1:+53975986 MS.gene008341:CDS
TTAGGTGTGGATCCATAATT+GGG 0.482044 3.1:-53976585 None:intergenic
TGGGATGTGCTTGGATCCCA+TGG 0.482178 3.1:-53976444 None:intergenic
AGAGATAGGAAGTATCCAAA+TGG 0.482478 3.1:+53975869 MS.gene008341:CDS
TCTGGATATTGGAAGGCAAC+CGG 0.484020 3.1:+53975917 MS.gene008341:CDS
AGCACATCCCAAAACATGAA+TGG 0.484763 3.1:+53976456 MS.gene008341:CDS
GCACATCCCAAAACATGAAT+GGG 0.487558 3.1:+53976457 MS.gene008341:CDS
TTGGATACTTCCTATCTCTA+GGG 0.493241 3.1:-53975865 None:intergenic
ATGCATGTGAGTAGTTTGAT+TGG 0.498766 3.1:-53976933 None:intergenic
GCGACTGAGAGATGGAAGTT+GGG 0.499506 3.1:+53979425 MS.gene008341:CDS
CACATGGATCTCGTACTGGT+TGG 0.499577 3.1:+53976017 MS.gene008341:CDS
ACATGGATCTCGTACTGGTT+GGG 0.500103 3.1:+53976018 MS.gene008341:CDS
GCTCAAGTTATTTGATGCCA+TGG 0.500480 3.1:+53976427 MS.gene008341:CDS
CGCATTCTCTTTCATCAAGA+CGG 0.502157 3.1:-53976054 None:intergenic
GATGGTAGAGAATTTGAGAT+GGG 0.502834 3.1:+53977140 MS.gene008341:CDS
GGAATGTCACAAGGGATGAT+GGG 0.516641 3.1:+53976505 MS.gene008341:CDS
TTCATTTCTAGTTCCACTCA+TGG 0.517202 3.1:-53976854 None:intergenic
CAGAATTCATACCAACTTGA+GGG 0.517910 3.1:-53976801 None:intergenic
GAATGCGACAATCCTTCTGC+TGG 0.526878 3.1:+53976070 MS.gene008341:CDS
CACAAGATCAATTGAAATTG+GGG 0.530743 3.1:+53977089 MS.gene008341:CDS
AACAAAATCTGGATATTGGA+AGG 0.532279 3.1:+53975910 MS.gene008341:CDS
TAATGGCCGTAGGATTGAGT+TGG 0.534104 3.1:+53974951 MS.gene008341:CDS
GGATGGTAGAGAATTTGAGA+TGG 0.534164 3.1:+53977139 MS.gene008341:CDS
AGGGAAATCTTCCACCTCCA+AGG 0.534705 3.1:-53976782 None:intergenic
GAAACTAGTAGTACCTTGGA+TGG 0.537317 3.1:-53976615 None:intergenic
CTCAAGTTATTTGATGCCAT+GGG 0.540843 3.1:+53976428 MS.gene008341:CDS
GAGATAGGAAGTATCCAAAT+GGG 0.549896 3.1:+53975870 MS.gene008341:CDS
ATAATGATTTCAAGGCTGAA+AGG 0.551027 3.1:+53977118 MS.gene008341:CDS
GAAACAAGTTCTTCATCGGT+GGG 0.553122 3.1:-53974907 None:intergenic
ATCAACAAAGAAACCAATGA+TGG 0.553308 3.1:+53977885 MS.gene008341:CDS
ACTTGTAGAGATCAACTTCA+GGG 0.553531 3.1:-53974981 None:intergenic
TACAAGCTATGAAGTTGTTG+AGG 0.553873 3.1:+53977998 MS.gene008341:CDS
AACTACTCACATGCATTTGG+TGG 0.556142 3.1:+53976940 MS.gene008341:CDS
TTAGTTTCAGGTTCCATGAG+TGG 0.557007 3.1:+53976841 MS.gene008341:CDS
GCACCACATGGATCTCGTAC+TGG 0.560233 3.1:+53976013 MS.gene008341:CDS
ATACTCTCAATAACAATGGT+GGG 0.561919 3.1:+53976484 MS.gene008341:CDS
ATAAGAAACAAGTTCTTCAT+CGG 0.563741 3.1:-53974911 None:intergenic
GTGGAAGATTTCCCTCAAGT+TGG 0.565953 3.1:+53976790 MS.gene008341:CDS
AACAAACAGGAAAGAGAATG+AGG 0.567981 3.1:+53977692 MS.gene008341:CDS
AATACTCTCAATAACAATGG+TGG 0.568121 3.1:+53976483 MS.gene008341:CDS
AATGCTCAGACTCGTGCCGT+TGG 0.569874 3.1:+53975956 MS.gene008341:CDS
AGCATTGAGTTGTACTCTGA+AGG 0.569905 3.1:+53976384 MS.gene008341:CDS
ACCTAATTACCCTCCATCCA+AGG 0.571030 3.1:+53976602 MS.gene008341:CDS
TACCCGGAAAAGATTTGGAA+TGG 0.574832 3.1:+53975831 MS.gene008341:CDS
AGTGTGCAAGGATGCAACAT+AGG 0.574842 3.1:+53976746 MS.gene008341:CDS
TGTGAACCATGGGACTTACC+AGG 0.575625 3.1:+53975003 MS.gene008341:CDS
CAAGTTCTTCATCGGTGGGG+TGG 0.575721 3.1:-53974903 None:intergenic
CTAGTAGTACCTTGGATGGA+GGG 0.579501 3.1:-53976611 None:intergenic
GATACATTGATGACAAAGCA+TGG 0.580634 3.1:+53977055 MS.gene008341:CDS
GGGAAATCTTCCACCTCCAA+GGG 0.583139 3.1:-53976781 None:intergenic
AGAAACAAGTTCTTCATCGG+TGG 0.583246 3.1:-53974908 None:intergenic
GGCAGCGTGCGACTGAGAGA+TGG 0.586347 3.1:+53979417 MS.gene008341:intron
ATTATACCTGGTAAGTCCCA+TGG 0.588626 3.1:-53975009 None:intergenic
TGATTTCAAGGCTGAAAGGA+TGG 0.591585 3.1:+53977122 MS.gene008341:CDS
GTGGGGTGGAACCTAAATCC+AGG 0.594805 3.1:-53974889 None:intergenic
GTCAAGCAATGATTTAGAGA+AGG 0.598075 3.1:+53977170 MS.gene008341:CDS
TGATCTCCAACTCAATCCTA+CGG 0.598596 3.1:-53974957 None:intergenic
TCTCTACAAGTGTGAACCAT+GGG 0.599917 3.1:+53974993 MS.gene008341:CDS
TCAGAATTCATACCAACTTG+AGG 0.601198 3.1:-53976802 None:intergenic
CAAACCTGCAAGCCAGCAGA+AGG 0.602880 3.1:-53976082 None:intergenic
TCTTCCTCTATAGTAAACTA+GGG 0.609079 3.1:-53975990 None:intergenic
ACTAGTAGTACCTTGGATGG+AGG 0.611789 3.1:-53976612 None:intergenic
ATATAGCACTAGAGTGTGCA+AGG 0.612154 3.1:+53976734 MS.gene008341:CDS
GGATGGAGGGTAATTAGGTG+TGG 0.613754 3.1:-53976598 None:intergenic
ACAATGGTGGGAATGTCACA+AGG 0.618508 3.1:+53976496 MS.gene008341:CDS
GGCAACCGGAAAAGATCGCA+AGG 0.625272 3.1:+53975931 MS.gene008341:CDS
ACTAATACTCTCAATAACAA+TGG 0.632242 3.1:+53976480 MS.gene008341:CDS
ACAGGGAAGTCATTGCTACC+CGG 0.633097 3.1:+53975815 MS.gene008341:intron
AGTGATTGCTCCAAAAGTTG+GGG 0.636145 3.1:+53976302 MS.gene008341:CDS
AGGAAAGAGAATGAGGTGCA+AGG 0.639598 3.1:+53977699 MS.gene008341:CDS
ATCTCTACAAGTGTGAACCA+TGG 0.647017 3.1:+53974992 MS.gene008341:CDS
AAATCTTCCACCTCCAAGGG+AGG 0.647573 3.1:-53976778 None:intergenic
AATATGTTAATAATGTGACT+TGG 0.651145 3.1:+53976328 MS.gene008341:CDS
ACATTGATAATTTCTCAATG+GGG 0.652367 3.1:+53977910 MS.gene008341:CDS
AAAGAAAGATTAATGGCCGT+AGG 0.654666 3.1:+53974941 MS.gene008341:CDS
ACTGAGAGATGGAAGTTGGG+AGG 0.662725 3.1:+53979428 MS.gene008341:CDS
AAACAAGTTCTTCATCGGTG+GGG 0.664766 3.1:-53974906 None:intergenic
TATAGAGGAAGAGCACCACA+TGG 0.688357 3.1:+53976001 MS.gene008341:CDS
CAATGGTGGGAATGTCACAA+GGG 0.721046 3.1:+53976497 MS.gene008341:CDS
AAGTTGGGAGGAAACACGTG+AGG 0.730895 3.1:+53979440 MS.gene008341:CDS
GGGTGGAACCTAAATCCAGG+AGG 0.759574 3.1:-53974886 None:intergenic
CAACCAGTACGAGATCCATG+TGG 0.769664 3.1:-53976016 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ACTAAAAACAAAATAAAATT+AGG - chr3.1:53978545-53978564 None:intergenic 10.0%
!! GTTAATTTATTAAATATTGT+AGG - chr3.1:53977580-53977599 None:intergenic 10.0%
!!! ACATTTTTAAAATTCATTTT+TGG - chr3.1:53977323-53977342 None:intergenic 10.0%
!!! CATTTTTAAAATTCATTTTT+GGG - chr3.1:53977322-53977341 None:intergenic 10.0%
!!! CTTTATTCTTTTTTTTTTTT+TGG + chr3.1:53977482-53977501 MS.gene008341:intron 10.0%
!!! TTAATTAAATGCATTTTTTT+TGG + chr3.1:53976652-53976671 MS.gene008341:intron 10.0%
!! AAAAAAAAAATACAAGTATC+TGG - chr3.1:53978655-53978674 None:intergenic 15.0%
!! AAACTAAAGTTAATCAATAA+AGG - chr3.1:53978764-53978783 None:intergenic 15.0%
!! AAACTAAATTTACTAACAAT+AGG + chr3.1:53977827-53977846 MS.gene008341:intron 15.0%
!! AATTAACCTAAAATATCATA+AGG + chr3.1:53978894-53978913 MS.gene008341:intron 15.0%
!! ATTAACCTAAAATATCATAA+GGG + chr3.1:53978895-53978914 MS.gene008341:intron 15.0%
!!! AAATTGTCTTAATTATTTTC+AGG + chr3.1:53976708-53976727 MS.gene008341:intron 15.0%
!!! AATAATTTTACAGAGTTTTA+TGG + chr3.1:53977623-53977642 MS.gene008341:intron 15.0%
!!! ACTTGTATTTTTTTTTTACT+TGG + chr3.1:53978658-53978677 MS.gene008341:intron 15.0%
!!! GGGTTTTAAAATTATATATA+GGG + chr3.1:53978615-53978634 MS.gene008341:intron 15.0%
!!! GGTTTTAAAATTATATATAG+GGG + chr3.1:53978616-53978635 MS.gene008341:intron 15.0%
!! AAACATGCAAATATATAACT+AGG + chr3.1:53975728-53975747 MS.gene008341:intron 20.0%
!! AAAGAATCTTAAAAAAGTGA+AGG + chr3.1:53975423-53975442 MS.gene008341:intron 20.0%
!! AACAGTTTAAATTCTCAAAT+TGG + chr3.1:53978593-53978612 MS.gene008341:intron 20.0%
!! AATATGTTAATAATGTGACT+TGG + chr3.1:53976328-53976347 MS.gene008341:CDS 20.0%
!! AATTTGTCAATTTACTTATC+CGG - chr3.1:53979056-53979075 None:intergenic 20.0%
!! ACAGTTTAAATTCTCAAATT+GGG + chr3.1:53978594-53978613 MS.gene008341:intron 20.0%
!! ATGATTATACCAAAAAATCA+AGG + chr3.1:53978167-53978186 MS.gene008341:intron 20.0%
!! CATCTATAAAATTCTCATTA+GGG - chr3.1:53977953-53977972 None:intergenic 20.0%
!! CATCTTTATTCTACAATATA+CGG + chr3.1:53975478-53975497 MS.gene008341:intron 20.0%
!! CTTTATTACTAACTAGTATA+TGG + chr3.1:53976117-53976136 MS.gene008341:intron 20.0%
!! GATTAAGTGATTATACAAAT+TGG + chr3.1:53979267-53979286 MS.gene008341:intron 20.0%
!! GTATACTTAATAAAATTCCA+AGG - chr3.1:53977360-53977379 None:intergenic 20.0%
!! TAATAAAATTCCAAGGATAT+GGG - chr3.1:53977353-53977372 None:intergenic 20.0%
!! TAATGTTATCTTATTAGTGT+TGG + chr3.1:53977456-53977475 MS.gene008341:intron 20.0%
!! TAGTATATGGTTGTTTAATA+TGG + chr3.1:53976130-53976149 MS.gene008341:intron 20.0%
!! TATACTAGTTAGTAATAAAG+AGG - chr3.1:53976117-53976136 None:intergenic 20.0%
!! TATCAAATACAATAACATTG+AGG - chr3.1:53978821-53978840 None:intergenic 20.0%
!! TCATCTATAAAATTCTCATT+AGG - chr3.1:53977954-53977973 None:intergenic 20.0%
!! TTAATAAAATTCCAAGGATA+TGG - chr3.1:53977354-53977373 None:intergenic 20.0%
!! TTCAATAACAAACTATCATA+TGG - chr3.1:53978517-53978536 None:intergenic 20.0%
!! TTCTTAAATTAGTACTTAGA+TGG - chr3.1:53977233-53977252 None:intergenic 20.0%
!! TTGAAAAAAATTGTGATTTC+AGG + chr3.1:53976242-53976261 MS.gene008341:intron 20.0%
!!! AACATTGATAATTTCTCAAT+GGG + chr3.1:53977909-53977928 MS.gene008341:CDS 20.0%
!!! AACATTTTATTGTCTATAGA+TGG - chr3.1:53976219-53976238 None:intergenic 20.0%
!!! AAGTGGTTTCTAAAAAATAA+TGG + chr3.1:53979083-53979102 MS.gene008341:intron 20.0%
!!! AATGAGAATTTTATAGATGA+TGG + chr3.1:53977954-53977973 MS.gene008341:CDS 20.0%
!!! AATTTTCCTAACTATATCTT+TGG + chr3.1:53978469-53978488 MS.gene008341:intron 20.0%
!!! AGTATATTTTTTTTGCACTT+TGG + chr3.1:53975525-53975544 MS.gene008341:intron 20.0%
!!! ATATATTTGCATGTTTTGAA+AGG - chr3.1:53975724-53975743 None:intergenic 20.0%
!!! GAAAATTTTATAACAAGAAG+AGG + chr3.1:53975292-53975311 MS.gene008341:intron 20.0%
!!! GGATTTTAAGAAGAAAAAAA+TGG - chr3.1:53978976-53978995 None:intergenic 20.0%
!!! GGGGTTTTAAAATTATATAT+AGG + chr3.1:53978614-53978633 MS.gene008341:intron 20.0%
!!! GTTTCTAAAAAATAATGGAT+GGG + chr3.1:53979088-53979107 MS.gene008341:intron 20.0%
!!! TAACATTGATAATTTCTCAA+TGG + chr3.1:53977908-53977927 MS.gene008341:CDS 20.0%
!!! TGAAAGTGATTTTACTTTTA+TGG + chr3.1:53976987-53977006 MS.gene008341:CDS 20.0%
!!! TGTTTTTAGTTTCTAACTTA+AGG + chr3.1:53978555-53978574 MS.gene008341:intron 20.0%
!!! TTTATTTTTGTAATTGACCT+TGG + chr3.1:53977751-53977770 MS.gene008341:intron 20.0%
!!! TTTTAAGAAGAAAAAAATGG+AGG - chr3.1:53978973-53978992 None:intergenic 20.0%
!!! TTTTTGACGTAAGAAAAAAA+TGG - chr3.1:53978934-53978953 None:intergenic 20.0%
!!! TTTTTTTTTGGGTACAAATT+TGG + chr3.1:53977494-53977513 MS.gene008341:intron 20.0%
! AAAAAATAGCCTATATATGG+TGG - chr3.1:53977284-53977303 None:intergenic 25.0%
! AACACAAGATCAATTGAAAT+TGG + chr3.1:53977087-53977106 MS.gene008341:CDS 25.0%
! ACACAAGATCAATTGAAATT+GGG + chr3.1:53977088-53977107 MS.gene008341:CDS 25.0%
! ACCAAAAAATAGCCTATATA+TGG - chr3.1:53977287-53977306 None:intergenic 25.0%
! ACTAATACTCTCAATAACAA+TGG + chr3.1:53976480-53976499 MS.gene008341:CDS 25.0%
! ATAAGAAACAAGTTCTTCAT+CGG - chr3.1:53974914-53974933 None:intergenic 25.0%
! ATAGCATGAAGAAAATCATT+TGG + chr3.1:53978378-53978397 MS.gene008341:intron 25.0%
! ATTATCAATGTTACCATCAT+TGG - chr3.1:53977901-53977920 None:intergenic 25.0%
! ATTATGCATGACATTATACA+GGG + chr3.1:53975798-53975817 MS.gene008341:intron 25.0%
! ATTTCAATTGATCTTGTGTT+TGG - chr3.1:53977087-53977106 None:intergenic 25.0%
! CAGTTTAAATTCTCAAATTG+GGG + chr3.1:53978595-53978614 MS.gene008341:intron 25.0%
! CATAAACTCATGTCATATAT+AGG - chr3.1:53975047-53975066 None:intergenic 25.0%
! CTAACTTAAGGATTTGATAT+AGG + chr3.1:53978567-53978586 MS.gene008341:intron 25.0%
! CTGATTGACAAAATCATTAT+TGG + chr3.1:53975349-53975368 MS.gene008341:intron 25.0%
! CTTTGGCATAAAATATTTAG+AGG + chr3.1:53975542-53975561 MS.gene008341:intron 25.0%
! TACCTCAAAAGAAAGATTAA+TGG + chr3.1:53974934-53974953 MS.gene008341:CDS 25.0%
! TATTAAATATTGTAGGGTCT+AGG - chr3.1:53977573-53977592 None:intergenic 25.0%
! TATTATGCATGACATTATAC+AGG + chr3.1:53975797-53975816 MS.gene008341:intron 25.0%
! TATTCTTATGAGTACTATCA+AGG + chr3.1:53977523-53977542 MS.gene008341:intron 25.0%
! TCATTTGGAAAGAGAAAATT+TGG + chr3.1:53978393-53978412 MS.gene008341:intron 25.0%
! TTAGTCAATGTTCAAAACTA+AGG - chr3.1:53975271-53975290 None:intergenic 25.0%
! TTGACAAATTCAGATATAAG+TGG + chr3.1:53979066-53979085 MS.gene008341:intron 25.0%
! TTGGTTTCTTTGTTGATATT+TGG - chr3.1:53977882-53977901 None:intergenic 25.0%
! TTTCATGTACTTCATCAAAT+TGG - chr3.1:53978219-53978238 None:intergenic 25.0%
! TTTGAGTGTAATATTATACC+TGG - chr3.1:53975024-53975043 None:intergenic 25.0%
!! ACATTGATAATTTCTCAATG+GGG + chr3.1:53977910-53977929 MS.gene008341:CDS 25.0%
!! ATTTTTCGCAGAAATTTAGA+GGG - chr3.1:53979204-53979223 None:intergenic 25.0%
!! GGTTTCTAAAAAATAATGGA+TGG + chr3.1:53979087-53979106 MS.gene008341:intron 25.0%
!! TATTTTTCGCAGAAATTTAG+AGG - chr3.1:53979205-53979224 None:intergenic 25.0%
!!! ACCATATATAGGCTATTTTT+TGG + chr3.1:53977283-53977302 MS.gene008341:intron 25.0%
!!! AGTGATTTTACTTTTATGGT+TGG + chr3.1:53976991-53977010 MS.gene008341:CDS 25.0%
!!! GATTTTTTGTTTTCCAGAAT+TGG - chr3.1:53978128-53978147 None:intergenic 25.0%
!!! GTTCATATTTGCACTTTTTT+TGG + chr3.1:53978271-53978290 MS.gene008341:intron 25.0%
!!! TCTCCTCTTTTTTTTTTTGA+GGG - chr3.1:53979342-53979361 None:intergenic 25.0%
!!! TTCTCCTCTTTTTTTTTTTG+AGG - chr3.1:53979343-53979362 None:intergenic 25.0%
!!! TTGTCTTAATTATTTTCAGG+TGG + chr3.1:53976711-53976730 MS.gene008341:intron 25.0%
AAAACAGTCAACAAAAGGAA+AGG + chr3.1:53975664-53975683 MS.gene008341:intron 30.0%
AAAACCCTAGTTTACTATAG+AGG + chr3.1:53975986-53976005 MS.gene008341:CDS 30.0%
AAAAGAAACTAGTAGTACCT+TGG - chr3.1:53976622-53976641 None:intergenic 30.0%
AAAGAGCCAAAGATATAGTT+AGG - chr3.1:53978478-53978497 None:intergenic 30.0%
AAATGAAACAGATATCTTGC+AGG + chr3.1:53976870-53976889 MS.gene008341:CDS 30.0%
AACAAAATCTGGATATTGGA+AGG + chr3.1:53975910-53975929 MS.gene008341:CDS 30.0%
AACAAATTGAACATCACCAT+TGG - chr3.1:53978797-53978816 None:intergenic 30.0%
AAGATAATAGAGTCTATCGT+TGG - chr3.1:53976162-53976181 None:intergenic 30.0%
AAGCTTGAAATATCCTCAAT+TGG - chr3.1:53977669-53977688 None:intergenic 30.0%
AAGTGATTATACAAATTGGC+TGG + chr3.1:53979271-53979290 MS.gene008341:intron 30.0%
AATACTCTCAATAACAATGG+TGG + chr3.1:53976483-53976502 MS.gene008341:CDS 30.0%
ACAAATTGAACATCACCATT+GGG - chr3.1:53978796-53978815 None:intergenic 30.0%
ACATCAAATGATTGGATGTT+CGG - chr3.1:53977385-53977404 None:intergenic 30.0%
ACTCAAAAACAGTCAACAAA+AGG + chr3.1:53975659-53975678 MS.gene008341:intron 30.0%
ATAATGATTTCAAGGCTGAA+AGG + chr3.1:53977118-53977137 MS.gene008341:CDS 30.0%
ATACTCTCAATAACAATGGT+GGG + chr3.1:53976484-53976503 MS.gene008341:CDS 30.0%
ATCAACAAAGAAACCAATGA+TGG + chr3.1:53977885-53977904 MS.gene008341:CDS 30.0%
CAAAGTCAGAATATGTGAAA+AGG + chr3.1:53978336-53978355 MS.gene008341:intron 30.0%
CACAAGATCAATTGAAATTG+GGG + chr3.1:53977089-53977108 MS.gene008341:CDS 30.0%
CATAGAAATCCACCATATAT+AGG + chr3.1:53977272-53977291 MS.gene008341:intron 30.0%
CATAGTAATGAGGAAATAGT+TGG + chr3.1:53975629-53975648 MS.gene008341:intron 30.0%
CATCCCTCAAAAAAAAAAAG+AGG + chr3.1:53979336-53979355 MS.gene008341:intron 30.0%
CTCTCTCTTAAAGAAGTTTA+AGG + chr3.1:53978193-53978212 MS.gene008341:intron 30.0%
CTGTACTCTTCTTGAATATA+CGG - chr3.1:53976284-53976303 None:intergenic 30.0%
GAAACAACAAAAGTTAGTCA+TGG + chr3.1:53978020-53978039 MS.gene008341:intron 30.0%
GTCAATCAGAACAAAATAAG+AGG - chr3.1:53975338-53975357 None:intergenic 30.0%
GTGAAAAGGAAATATAGCTA+TGG + chr3.1:53978350-53978369 MS.gene008341:intron 30.0%
GTTAGTATCAAAAGTGGTAA+AGG + chr3.1:53978419-53978438 MS.gene008341:intron 30.0%
TACATGTGACATCAAATGAT+TGG - chr3.1:53977393-53977412 None:intergenic 30.0%
TATGGTTGTTTAATATGGAC+CGG + chr3.1:53976135-53976154 MS.gene008341:intron 30.0%
TCAAAAGATTGTTCCAATTG+AGG + chr3.1:53977653-53977672 MS.gene008341:CDS 30.0%
TCATCATTGTTGACAAGAAA+AGG + chr3.1:53979129-53979148 MS.gene008341:intron 30.0%
TCTTCATCATTTCCCAATTA+TGG + chr3.1:53976573-53976592 MS.gene008341:CDS 30.0%
TCTTCCTCTATAGTAAACTA+GGG - chr3.1:53975993-53976012 None:intergenic 30.0%
TGAACTTTGATTGTTTGTGA+TGG - chr3.1:53978098-53978117 None:intergenic 30.0%
TTGACGTAAGAAAAAAATGG+AGG - chr3.1:53978931-53978950 None:intergenic 30.0%
TTGGGAAATGATGAAGATAT+TGG - chr3.1:53976570-53976589 None:intergenic 30.0%
TTTCAAGCTTCAAAACAAAC+AGG + chr3.1:53977679-53977698 MS.gene008341:CDS 30.0%
! AGTAGCCCTTATGATATTTT+AGG - chr3.1:53978903-53978922 None:intergenic 30.0%
! ATACCATTCCAAATCTTTTC+CGG - chr3.1:53975837-53975856 None:intergenic 30.0%
! ATTAGTCCCATTCATGTTTT+GGG - chr3.1:53976466-53976485 None:intergenic 30.0%
! CTTTTCACATATTCTGACTT+TGG - chr3.1:53978338-53978357 None:intergenic 30.0%
! TATTAGTCCCATTCATGTTT+TGG - chr3.1:53976467-53976486 None:intergenic 30.0%
!! AGGTTGATCTTTTAATCTCA+AGG - chr3.1:53975318-53975337 None:intergenic 30.0%
!! GGATCTTGATAATGATTTCA+AGG + chr3.1:53977110-53977129 MS.gene008341:CDS 30.0%
!! TAGTTTTTATTTAGCCCCAA+TGG + chr3.1:53978778-53978797 MS.gene008341:intron 30.0%
!! TGGTTTGTTAGTATCAAAAG+TGG + chr3.1:53978413-53978432 MS.gene008341:intron 30.0%
!! TTGTTTGTGATGGTGTTATT+TGG - chr3.1:53978088-53978107 None:intergenic 30.0%
!!! AGAGAGTATCCTTGATTTTT+TGG - chr3.1:53978179-53978198 None:intergenic 30.0%
!!! TTGTTGACTGTTTTTGAGTT+GGG - chr3.1:53975658-53975677 None:intergenic 30.0%
!!! TTTGTTGACTGTTTTTGAGT+TGG - chr3.1:53975659-53975678 None:intergenic 30.0%
AAAGAAAGATTAATGGCCGT+AGG + chr3.1:53974941-53974960 MS.gene008341:CDS 35.0%
AACAAACAGGAAAGAGAATG+AGG + chr3.1:53977692-53977711 MS.gene008341:CDS 35.0%
ACCAATAGAGCAACAAAATC+TGG + chr3.1:53975899-53975918 MS.gene008341:CDS 35.0%
ACTTGTAGAGATCAACTTCA+GGG - chr3.1:53974984-53975003 None:intergenic 35.0%
AGTTCAACTCAATCCAATTC+TGG + chr3.1:53978112-53978131 MS.gene008341:intron 35.0%
ATGCATGTGAGTAGTTTGAT+TGG - chr3.1:53976936-53976955 None:intergenic 35.0%
ATTAGGTGTGGATCCATAAT+TGG - chr3.1:53976589-53976608 None:intergenic 35.0%
CAAATTGAACATCACCATTG+GGG - chr3.1:53978795-53978814 None:intergenic 35.0%
CAATATATGTTTCTCACGTC+CGG + chr3.1:53979034-53979053 MS.gene008341:intron 35.0%
CAGAATTCATACCAACTTGA+GGG - chr3.1:53976804-53976823 None:intergenic 35.0%
CTCAAGTTATTTGATGCCAT+GGG + chr3.1:53976428-53976447 MS.gene008341:CDS 35.0%
CTCTTCCTCTATAGTAAACT+AGG - chr3.1:53975994-53976013 None:intergenic 35.0%
GAGAATGGTCCTTCAAAATA+GGG + chr3.1:53975583-53975602 MS.gene008341:intron 35.0%
GAGCAACAAAATCTGGATAT+TGG + chr3.1:53975906-53975925 MS.gene008341:CDS 35.0%
GCAAATATATAACTAGGTCG+AGG + chr3.1:53975734-53975753 MS.gene008341:intron 35.0%
GGTGCTTTGTGTTTATTTGA+AGG + chr3.1:53978292-53978311 MS.gene008341:intron 35.0%
GTACATGTTACATATGACCA+AGG - chr3.1:53977771-53977790 None:intergenic 35.0%
GTCAAGCAATGATTTAGAGA+AGG + chr3.1:53977170-53977189 MS.gene008341:CDS 35.0%
GTTAGTAATAAAGAGGTTCG+CGG - chr3.1:53976110-53976129 None:intergenic 35.0%
TACAAGCTATGAAGTTGTTG+AGG + chr3.1:53977998-53978017 MS.gene008341:CDS 35.0%
TACATGCACACAAAAGATAG+AGG + chr3.1:53975225-53975244 MS.gene008341:intron 35.0%
TCAAACTACTCACATGCATT+TGG + chr3.1:53976937-53976956 MS.gene008341:CDS 35.0%
TCAGAATTCATACCAACTTG+AGG - chr3.1:53976805-53976824 None:intergenic 35.0%
TGTTTATTTGAAGGAGCAAG+TGG + chr3.1:53978301-53978320 MS.gene008341:intron 35.0%
TTAGGTGTGGATCCATAATT+GGG - chr3.1:53976588-53976607 None:intergenic 35.0%
TTGGATACTTCCTATCTCTA+GGG - chr3.1:53975868-53975887 None:intergenic 35.0%
TTTGGATACTTCCTATCTCT+AGG - chr3.1:53975869-53975888 None:intergenic 35.0%
! CAAAAGTGGTAAAGGTTTTG+AGG + chr3.1:53978427-53978446 MS.gene008341:intron 35.0%
! GATACATTGATGACAAAGCA+TGG + chr3.1:53977055-53977074 MS.gene008341:CDS 35.0%
! GATGGTAGAGAATTTGAGAT+GGG + chr3.1:53977140-53977159 MS.gene008341:CDS 35.0%
! GGCCATTAATCTTTCTTTTG+AGG - chr3.1:53974939-53974958 None:intergenic 35.0%
! GTCGAGGTGTTTCTAAAAAA+GGG + chr3.1:53975750-53975769 MS.gene008341:intron 35.0%
! GTGTTTTTCTCCGTATAGAT+TGG - chr3.1:53979015-53979034 None:intergenic 35.0%
! TACCATTCCAAATCTTTTCC+GGG - chr3.1:53975836-53975855 None:intergenic 35.0%
! TAGGGTTTTCTTCATTCCAA+CGG - chr3.1:53975975-53975994 None:intergenic 35.0%
! TCCAGATTTTGTTGCTCTAT+TGG - chr3.1:53975903-53975922 None:intergenic 35.0%
!! AAGATGACACGATTAGTTTC+AGG + chr3.1:53976829-53976848 MS.gene008341:CDS 35.0%
!! AGAGATAGGAAGTATCCAAA+TGG + chr3.1:53975869-53975888 MS.gene008341:CDS 35.0%
!! CAACAGTAACCCTATTTTGA+AGG - chr3.1:53975595-53975614 None:intergenic 35.0%
!! GAGATAGGAAGTATCCAAAT+GGG + chr3.1:53975870-53975889 MS.gene008341:CDS 35.0%
!! GCACTTGCTATTATCTTTGA+TGG - chr3.1:53978245-53978264 None:intergenic 35.0%
!! TTCATTTCTAGTTCCACTCA+TGG - chr3.1:53976857-53976876 None:intergenic 35.0%
!!! ATTTTTTCAGCCCTAGAGAT+AGG + chr3.1:53975855-53975874 MS.gene008341:CDS 35.0%
AAACAAGTTCTTCATCGGTG+GGG - chr3.1:53974909-53974928 None:intergenic 40.0%
AACTACTCACATGCATTTGG+TGG + chr3.1:53976940-53976959 MS.gene008341:CDS 40.0%
AATAGAGTCTATCGTTGGAC+CGG - chr3.1:53976157-53976176 None:intergenic 40.0%
ACAGTGATTGCTCCAAAAGT+TGG + chr3.1:53976300-53976319 MS.gene008341:CDS 40.0%
ACTTAACGTTGTAGGGAGAA+TGG + chr3.1:53975568-53975587 MS.gene008341:intron 40.0%
AGAAACAAGTTCTTCATCGG+TGG - chr3.1:53974911-53974930 None:intergenic 40.0%
AGAGGAGAATTAGAGTCTAG+AGG + chr3.1:53979354-53979373 MS.gene008341:intron 40.0%
AGAGTCTAGAGGATAGATGT+GGG + chr3.1:53979365-53979384 MS.gene008341:intron 40.0%
AGCACATCCCAAAACATGAA+TGG + chr3.1:53976456-53976475 MS.gene008341:CDS 40.0%
AGTGATTGCTCCAAAAGTTG+GGG + chr3.1:53976302-53976321 MS.gene008341:CDS 40.0%
ATATAGCACTAGAGTGTGCA+AGG + chr3.1:53976734-53976753 MS.gene008341:CDS 40.0%
ATCTCTACAAGTGTGAACCA+TGG + chr3.1:53974992-53975011 MS.gene008341:CDS 40.0%
ATTATACCTGGTAAGTCCCA+TGG - chr3.1:53975012-53975031 None:intergenic 40.0%
ATTGCTACCCGGAAAAGATT+TGG + chr3.1:53975826-53975845 MS.gene008341:CDS 40.0%
CACTTGTAGAGATCAACTTC+AGG - chr3.1:53974985-53975004 None:intergenic 40.0%
CAGTGATTGCTCCAAAAGTT+GGG + chr3.1:53976301-53976320 MS.gene008341:CDS 40.0%
CATCGAATTCTTGTCGAGAA+AGG + chr3.1:53979302-53979321 MS.gene008341:intron 40.0%
CGCATTCTCTTTCATCAAGA+CGG - chr3.1:53976057-53976076 None:intergenic 40.0%
GAAACAAGTTCTTCATCGGT+GGG - chr3.1:53974910-53974929 None:intergenic 40.0%
GAAACTAGTAGTACCTTGGA+TGG - chr3.1:53976618-53976637 None:intergenic 40.0%
GAAAGAATGTGTCTGCTACT+TGG - chr3.1:53978064-53978083 None:intergenic 40.0%
GAAGGAAGAGATGAAGCTAT+AGG + chr3.1:53976402-53976421 MS.gene008341:CDS 40.0%
GCACATCCCAAAACATGAAT+GGG + chr3.1:53976457-53976476 MS.gene008341:CDS 40.0%
GCTCAAGTTATTTGATGCCA+TGG + chr3.1:53976427-53976446 MS.gene008341:CDS 40.0%
GGAACACATGCTTGCTTTAT+TGG + chr3.1:53975499-53975518 MS.gene008341:intron 40.0%
GGAGAATGGTCCTTCAAAAT+AGG + chr3.1:53975582-53975601 MS.gene008341:intron 40.0%
GGATGGTAGAGAATTTGAGA+TGG + chr3.1:53977139-53977158 MS.gene008341:CDS 40.0%
TACCCGGAAAAGATTTGGAA+TGG + chr3.1:53975831-53975850 MS.gene008341:CDS 40.0%
TAGAGTCTAGAGGATAGATG+TGG + chr3.1:53979364-53979383 MS.gene008341:intron 40.0%
TCTCTACAAGTGTGAACCAT+GGG + chr3.1:53974993-53975012 MS.gene008341:CDS 40.0%
TGATCTCCAACTCAATCCTA+CGG - chr3.1:53974960-53974979 None:intergenic 40.0%
TGATTTCAAGGCTGAAAGGA+TGG + chr3.1:53977122-53977141 MS.gene008341:CDS 40.0%
TTTCATTGCCTCCTGGATTT+AGG + chr3.1:53974878-53974897 MS.gene008341:CDS 40.0%
! ACATATTGCTCCCCAACTTT+TGG - chr3.1:53976315-53976334 None:intergenic 40.0%
! AGCATTGAGTTGTACTCTGA+AGG + chr3.1:53976384-53976403 MS.gene008341:CDS 40.0%
! ATTCACCTTGCGATCTTTTC+CGG - chr3.1:53975939-53975958 None:intergenic 40.0%
! GGTCGAGGTGTTTCTAAAAA+AGG + chr3.1:53975749-53975768 MS.gene008341:intron 40.0%
! GTAGAGAATTTGAGATGGGT+TGG + chr3.1:53977144-53977163 MS.gene008341:CDS 40.0%
! TATCATATGGTTAGCCCACA+TGG - chr3.1:53978504-53978523 None:intergenic 40.0%
! TTAGAGGGCGTGTAAAAGTA+CGG - chr3.1:53979189-53979208 None:intergenic 40.0%
!! CTATTGGTTCTTGACCCATT+TGG - chr3.1:53975887-53975906 None:intergenic 40.0%
!! TTAGTTTCAGGTTCCATGAG+TGG + chr3.1:53976841-53976860 MS.gene008341:CDS 40.0%
!! TTTGGCTCTTTGTACCATGT+GGG + chr3.1:53978487-53978506 MS.gene008341:intron 40.0%
!!! AAGTGGTAAAGGTTTTGAGG+TGG + chr3.1:53978430-53978449 MS.gene008341:intron 40.0%
!!! TTCATGTTTTGGGATGTGCT+TGG - chr3.1:53976456-53976475 None:intergenic 40.0%
AATCCAGGAGGCAATGAAAC+AGG - chr3.1:53974877-53974896 None:intergenic 45.0%
ACCTAATTACCCTCCATCCA+AGG + chr3.1:53976602-53976621 MS.gene008341:CDS 45.0%
ACCTTGGATGGAGGGTAATT+AGG - chr3.1:53976606-53976625 None:intergenic 45.0%
ACTAGTAGTACCTTGGATGG+AGG - chr3.1:53976615-53976634 None:intergenic 45.0%
AGGAAAGAGAATGAGGTGCA+AGG + chr3.1:53977699-53977718 MS.gene008341:CDS 45.0%
AGTGTGCAAGGATGCAACAT+AGG + chr3.1:53976746-53976765 MS.gene008341:CDS 45.0%
CGTCAAGGCACATAGTAATG+AGG + chr3.1:53975619-53975638 MS.gene008341:intron 45.0%
CTAGTAGTACCTTGGATGGA+GGG - chr3.1:53976614-53976633 None:intergenic 45.0%
CTCCGATGTGCCAATCTATA+CGG + chr3.1:53979002-53979021 MS.gene008341:intron 45.0%
CTCCGTATAGATTGGCACAT+CGG - chr3.1:53979007-53979026 None:intergenic 45.0%
GAGGCGTACTTAACGTTGTA+GGG + chr3.1:53975561-53975580 MS.gene008341:intron 45.0%
GGAATGTCACAAGGGATGAT+GGG + chr3.1:53976505-53976524 MS.gene008341:CDS 45.0%
GGTTACTGTTGTGAACGTCA+AGG + chr3.1:53975604-53975623 MS.gene008341:intron 45.0%
GTATAGATTGGCACATCGGA+GGG - chr3.1:53979003-53979022 None:intergenic 45.0%
GTGGAAGATTTCCCTCAAGT+TGG + chr3.1:53976790-53976809 MS.gene008341:CDS 45.0%
TAATGGCCGTAGGATTGAGT+TGG + chr3.1:53974951-53974970 MS.gene008341:CDS 45.0%
TATAGATTGGCACATCGGAG+GGG - chr3.1:53979002-53979021 None:intergenic 45.0%
TCTAGAGGATAGATGTGGGT+TGG + chr3.1:53979369-53979388 MS.gene008341:intron 45.0%
TCTGGATATTGGAAGGCAAC+CGG + chr3.1:53975917-53975936 MS.gene008341:CDS 45.0%
TGTGACAACTCCCATATCCT+TGG + chr3.1:53977340-53977359 MS.gene008341:intron 45.0%
! ACAATGGTGGGAATGTCACA+AGG + chr3.1:53976496-53976515 MS.gene008341:CDS 45.0%
! AGAGGCGTACTTAACGTTGT+AGG + chr3.1:53975560-53975579 MS.gene008341:intron 45.0%
! CAATGGTGGGAATGTCACAA+GGG + chr3.1:53976497-53976516 MS.gene008341:CDS 45.0%
! GAGGTGGTCTTGAAGAAGAT+AGG + chr3.1:53978446-53978465 MS.gene008341:intron 45.0%
! TAGAGGGCGTGTAAAAGTAC+GGG - chr3.1:53979188-53979207 None:intergenic 45.0%
! TAGGTTTTCTTTGCCTCCCT+TGG + chr3.1:53976765-53976784 MS.gene008341:CDS 45.0%
!! ACATGGATCTCGTACTGGTT+GGG + chr3.1:53976018-53976037 MS.gene008341:CDS 45.0%
!! AGGATAGATGTGGGTTGGAT+TGG + chr3.1:53979374-53979393 MS.gene008341:intron 45.0%
!! CTTTGGCTCTTTGTACCATG+TGG + chr3.1:53978486-53978505 MS.gene008341:intron 45.0%
!! TATAGAGGAAGAGCACCACA+TGG + chr3.1:53976001-53976020 MS.gene008341:CDS 45.0%
!! TCACAAGGGATGATGGGATT+TGG + chr3.1:53976511-53976530 MS.gene008341:CDS 45.0%
!! AATATTTAATAAATTAACAT+TGG + chr3.1:53977582-53977601 MS.gene008341:intron 5.0%
!! TATATATATATATATAAGTT+AGG + chr3.1:53975140-53975159 MS.gene008341:intron 5.0%
!! TTAATTTATTAAATATTGTA+GGG - chr3.1:53977579-53977598 None:intergenic 5.0%
!!! TTTATTCTTTTTTTTTTTTT+GGG + chr3.1:53977483-53977502 MS.gene008341:intron 5.0%
AAATCTTCCACCTCCAAGGG+AGG - chr3.1:53976781-53976800 None:intergenic 50.0%
ACAGGGAAGTCATTGCTACC+CGG + chr3.1:53975815-53975834 MS.gene008341:intron 50.0%
ACTGAGAGATGGAAGTTGGG+AGG + chr3.1:53979428-53979447 MS.gene008341:CDS 50.0%
AGGGAAATCTTCCACCTCCA+AGG - chr3.1:53976785-53976804 None:intergenic 50.0%
CAACCAGTACGAGATCCATG+TGG - chr3.1:53976019-53976038 None:intergenic 50.0%
CGTATAGATTGGCACATCGG+AGG - chr3.1:53979004-53979023 None:intergenic 50.0%
GAATGCGACAATCCTTCTGC+TGG + chr3.1:53976070-53976089 MS.gene008341:CDS 50.0%
GCGACTGAGAGATGGAAGTT+GGG + chr3.1:53979425-53979444 MS.gene008341:CDS 50.0%
GGATGGAGGGTAATTAGGTG+TGG - chr3.1:53976601-53976620 None:intergenic 50.0%
GGGAAATCTTCCACCTCCAA+GGG - chr3.1:53976784-53976803 None:intergenic 50.0%
GGGAATGTCACAAGGGATGA+TGG + chr3.1:53976504-53976523 MS.gene008341:CDS 50.0%
TGCGACTGAGAGATGGAAGT+TGG + chr3.1:53979424-53979443 MS.gene008341:CDS 50.0%
TGTGAACCATGGGACTTACC+AGG + chr3.1:53975003-53975022 MS.gene008341:CDS 50.0%
! CACATGGATCTCGTACTGGT+TGG + chr3.1:53976017-53976036 MS.gene008341:CDS 50.0%
! GTTTTCTTTGCCTCCCTTGG+AGG + chr3.1:53976768-53976787 MS.gene008341:CDS 50.0%
!! GTGCTGGTTACTTGTGTGTG+TGG + chr3.1:53979396-53979415 MS.gene008341:intron 50.0%
AATGCTCAGACTCGTGCCGT+TGG + chr3.1:53975956-53975975 MS.gene008341:CDS 55.0%
CAAACCTGCAAGCCAGCAGA+AGG - chr3.1:53976085-53976104 None:intergenic 55.0%
CAAGTTCTTCATCGGTGGGG+TGG - chr3.1:53974906-53974925 None:intergenic 55.0%
GCACCACATGGATCTCGTAC+TGG + chr3.1:53976013-53976032 MS.gene008341:CDS 55.0%
GCACCTGTTTCATTGCCTCC+TGG + chr3.1:53974871-53974890 MS.gene008341:CDS 55.0%
GGCAACCGGAAAAGATCGCA+AGG + chr3.1:53975931-53975950 MS.gene008341:CDS 55.0%
GGGTGGAACCTAAATCCAGG+AGG - chr3.1:53974889-53974908 None:intergenic 55.0%
GTGGGGTGGAACCTAAATCC+AGG - chr3.1:53974892-53974911 None:intergenic 55.0%
TGGGATGTGCTTGGATCCCA+TGG - chr3.1:53976447-53976466 None:intergenic 55.0%
TTCTTTGCCTCCCTTGGAGG+TGG + chr3.1:53976771-53976790 MS.gene008341:CDS 55.0%
! AGGGCGTGTAAAAGTACGGG+AGG - chr3.1:53979185-53979204 None:intergenic 55.0%
! GCGTGTAAAAGTACGGGAGG+GGG - chr3.1:53979182-53979201 None:intergenic 55.0%
! GGCGTGTAAAAGTACGGGAG+GGG - chr3.1:53979183-53979202 None:intergenic 55.0%
! GGGCGTGTAAAAGTACGGGA+GGG - chr3.1:53979184-53979203 None:intergenic 55.0%
!! CAATCCTTCTGCTGGCTTGC+AGG + chr3.1:53976078-53976097 MS.gene008341:CDS 55.0%
!! GATGTGGGTTGGATTGGTGC+TGG + chr3.1:53979380-53979399 MS.gene008341:intron 55.0%
ATTGGCACATCGGAGGGGTG+TGG - chr3.1:53978997-53979016 None:intergenic 60.0%
GGCAGCGTGCGACTGAGAGA+TGG + chr3.1:53979417-53979436 MS.gene008341:intron 65.0%


Chromosome Type Strat End Strand Name
chr3.1 gene 53974868 53979460 53974868 ID=MS.gene008341
chr3.1 mRNA 53974868 53979460 53974868 ID=MS.gene008341.t1;Parent=MS.gene008341
chr3.1 exon 53974868 53975024 53974868 ID=MS.gene008341.t1.exon1;Parent=MS.gene008341.t1
chr3.1 CDS 53974868 53975024 53974868 ID=cds.MS.gene008341.t1;Parent=MS.gene008341.t1
chr3.1 exon 53975819 53976099 53975819 ID=MS.gene008341.t1.exon2;Parent=MS.gene008341.t1
chr3.1 CDS 53975819 53976099 53975819 ID=cds.MS.gene008341.t1;Parent=MS.gene008341.t1
chr3.1 exon 53976264 53976623 53976264 ID=MS.gene008341.t1.exon3;Parent=MS.gene008341.t1
chr3.1 CDS 53976264 53976623 53976264 ID=cds.MS.gene008341.t1;Parent=MS.gene008341.t1
chr3.1 exon 53976730 53977191 53976730 ID=MS.gene008341.t1.exon4;Parent=MS.gene008341.t1
chr3.1 CDS 53976730 53977191 53976730 ID=cds.MS.gene008341.t1;Parent=MS.gene008341.t1
chr3.1 exon 53977636 53977720 53977636 ID=MS.gene008341.t1.exon5;Parent=MS.gene008341.t1
chr3.1 CDS 53977636 53977720 53977636 ID=cds.MS.gene008341.t1;Parent=MS.gene008341.t1
chr3.1 exon 53977865 53978031 53977865 ID=MS.gene008341.t1.exon6;Parent=MS.gene008341.t1
chr3.1 CDS 53977865 53978031 53977865 ID=cds.MS.gene008341.t1;Parent=MS.gene008341.t1
chr3.1 exon 53979422 53979460 53979422 ID=MS.gene008341.t1.exon7;Parent=MS.gene008341.t1
chr3.1 CDS 53979422 53979460 53979422 ID=cds.MS.gene008341.t1;Parent=MS.gene008341.t1
Gene Sequence

>MS.gene008341

ATGGCACCTGTTTCATTGCCTCCTGGATTTAGGTTCCACCCCACCGATGAAGAACTTGTTTCTTATTACCTCAAAAGAAAGATTAATGGCCGTAGGATTGAGTTGGAGATCATCCCTGAAGTTGATCTCTACAAGTGTGAACCATGGGACTTACCAGGTATAATATTACACTCAAACCTATATATGACATGAGTTTATGATTGTCAATTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAAGTTAGGATTAAAATCAAAATATTTTTATTGATATATAAAAAGTGACATTGTGTAACATCTTTCATCAATACATGCACACAAAAGATAGAGGTTTCAAAATTCATTTTTTGACCTTAGTTTTGAACATTGACTAAAGAAAATTTTATAACAAGAAGAGGCCTTGAGATTAAAAGATCAACCTCTTATTTTGTTCTGATTGACAAAATCATTATTGGTTAATGTAGCTTGCAATATTCAGAAGTGCTTTTAACAATCAAAACAAATTAAAAGAATCTTAAAAAAGTGAAGGCACATTTCTTTAGACACGATTTTGCTTCTAATCATCTTTATTCTACAATATACGGAACACATGCTTGCTTTATTGGTCAAGTATATTTTTTTTGCACTTTGGCATAAAATATTTAGAGGCGTACTTAACGTTGTAGGGAGAATGGTCCTTCAAAATAGGGTTACTGTTGTGAACGTCAAGGCACATAGTAATGAGGAAATAGTTGGATTCCCAACTCAAAAACAGTCAACAAAAGGAAAGGATCACATATTAAAGAAGATTTCTTAATTTTTCAGCCTTTCAAAACATGCAAATATATAACTAGGTCGAGGTGTTTCTAAAAAAGGGTTATGATTGTTAACGAATTGTTATTATTATGCATGACATTATACAGGGAAGTCATTGCTACCCGGAAAAGATTTGGAATGGTATTTTTTCAGCCCTAGAGATAGGAAGTATCCAAATGGGTCAAGAACCAATAGAGCAACAAAATCTGGATATTGGAAGGCAACCGGAAAAGATCGCAAGGTGAATGCTCAGACTCGTGCCGTTGGAATGAAGAAAACCCTAGTTTACTATAGAGGAAGAGCACCACATGGATCTCGTACTGGTTGGGTTATGCATGAGTACCGTCTTGATGAAAGAGAATGCGACAATCCTTCTGCTGGCTTGCAGGTTTGAACCGCGAACCTCTTTATTACTAACTAGTATATGGTTGTTTAATATGGACCGGTCCAACGATAGACTCTATTATCTTTAGTAAATTTAATAAAAGAGAAATTTTGATCAGTCCATCTATAGACAATAAAATGTTTGATTGAAAAAAATTGTGATTTCAGGATGCATATGCTCTTTGCCGTATATTCAAGAAGAGTACAGTGATTGCTCCAAAAGTTGGGGAGCAATATGTTAATAATGTGACTTGGCATGCAAATCATATGACAAGTGATCAATCATCAAGCATTGAGTTGTACTCTGAAGGAAGAGATGAAGCTATAGGAAGCTCAAGTTATTTGATGCCATGGGATCCAAGCACATCCCAAAACATGAATGGGACTAATACTCTCAATAACAATGGTGGGAATGTCACAAGGGATGATGGGATTTGGACACAATTCTTATCAGAAGACTTACTCAATATTCCAATATCTTCATCATTTCCCAATTATGGATCCACACCTAATTACCCTCCATCCAAGGTACTACTAGTTTCTTTTGCAACAAAGCTTAATTAAATGCATTTTTTTTGGTGAAAAAAAAAAATCACTTGTATGAGTTTTTAAAAATTGTCTTAATTATTTTCAGGTGGATATAGCACTAGAGTGTGCAAGGATGCAACATAGGTTTTCTTTGCCTCCCTTGGAGGTGGAAGATTTCCCTCAAGTTGGTATGAATTCTGAGCTGAAGATGACACGATTAGTTTCAGGTTCCATGAGTGGAACTAGAAATGAAACAGATATCTTGCAGGAAATTCTATCTGTAGCTCAAGCTTCTCAAGAATTGATAAACCAATCAAACTACTCACATGCATTTGGTGGCAATGAGAATTATGCTACTGATCATGAAAGTGATTTTACTTTTATGGTTGGAAATAATTACAATCATGTGACTGATCATATGAGTTCTATGAGATACATTGATGACAAAGCATGGAAAGATCCAAACACAAGATCAATTGAAATTGGGGATCTTGATAATGATTTCAAGGCTGAAAGGATGGTAGAGAATTTGAGATGGGTTGGAATGTCAAGCAATGATTTAGAGAAGGTATGCTAGCTATATTGCTAATATTTAATTTTAAAGTGCCATCTAAGTACTAATTTAAGAATAAGATCTTATATATCAATCATAGAAATCCACCATATATAGGCTATTTTTTGGTATATTATAAAGTCCCAAAAATGAATTTTAAAAATGTGACAACTCCCATATCCTTGGAATTTTATTAAGTATACTACCGAACATCCAATCATTTGATGTCACATGTACTCTTTAATATTTAATTATTTTTAAGTGAATTTAATTTTTTATTAATGTTATCTTATTAGTGTTGGTATCTTTATTCTTTTTTTTTTTTTGGGTACAAATTTGGTATCTTTATTCTTATGAGTACTATCAAGGAAATCTTCTTTTGAAAATTGCTAGCCTAGACCCTACAATATTTAATAAATTAACATTGGACTTTATATGATTATTTGAATAATTTTACAGAGTTTTATGGAAGAGCATCAAAAGATTGTTCCAATTGAGGATATTTCAAGCTTCAAAACAAACAGGAAAGAGAATGAGGTGCAAGGTATTATTTCTAATTAAAAATTAAATGCGCTTTATTTTTGTAATTGACCTTGGTCATATGTAACATGTACTCATAACTTTTTTTTTAATTTACTATTTAATTTCATAAACTAAATTTACTAACAATAGGTTTTGTACTTTACAGTAGAATCTGAGCAACCAAATATCAACAAAGAAACCAATGATGGTAACATTGATAATTTCTCAATGGGGTTTATCAATGATAATGACCCTAATGAGAATTTTATAGATGATGGTAACATTGATTATTCAAATTCTACAAGCTATGAAGTTGTTGAGGAAACAACAAAAGTTAGTCATGGAATGTTTGTTGCTACACGCCAAGTAGCAGACACATTCTTTCACCAAATAACACCATCACAAACAATCAAAGTTCAACTCAATCCAATTCTGGAAAACAAAAAATCTATAGAGAATGCAGAGAAAATGATTATACCAAAAAATCAAGGATACTCTCTCTTAAAGAAGTTTAAGGCCAATTTGATGAAGTACATGAAAAATCCATCAAAGATAATAGCAAGTGCAATTGTGTTCATATTTGCACTTTTTTTGGTGCTTTGTGTTTATTTGAAGGAGCAAGTGGAAGATATGAAACCAAAGTCAGAATATGTGAAAAGGAAATATAGCTATGGAGCTAATAGCATGAAGAAAATCATTTGGAAAGAGAAAATTTGGTTTGTTAGTATCAAAAGTGGTAAAGGTTTTGAGGTGGTCTTGAAGAAGATAGGAATTTTCCTAACTATATCTTTGGCTCTTTGTACCATGTGGGCTAACCATATGATAGTTTGTTATTGAACAATTCCTAATTTTATTTTGTTTTTAGTTTCTAACTTAAGGATTTGATATAGGAAAAACAGTTTAAATTCTCAAATTGGGGTTTTAAAATTATATATAGGGGATCGATGATGTATCCAGATACTTGTATTTTTTTTTTACTTGGTCACTTATATGCTTTTTTTTACTTGTCACTTATATGTTATTTGATTAAGAATTTGTTACATTCAATACTAATTATAGAATCCTTTATTGATTAACTTTAGTTTTTATTTAGCCCCAATGGTGATGTTCAATTTGTTTCCTCAATGTTATTGTATTTGATATTCGTTTCAAATTAGTATAAAAGTCGTACATGCACAATAATTTTTTCTTCAAGAATTAACCTAAAATATCATAAGGGCTACTTTTATCCTCCATTTTTTTCTTACGTCAAAAAGAAGAAGAAAAAAAATCCTCCATTTTTTTCTTCTTAAAATCCACACCCCTCCGATGTGCCAATCTATACGGAGAAAAACACAATATATGTTTCTCACGTCCGGATAAGTAAATTGACAAATTCAGATATAAGTGGTTTCTAAAAAATAATGGATGGGAAAAAAAACTCTCATATATCATCATTGTTGACAAGAAAAGGAAGAAAATAAAAGAGAATTTTTCATCGCCCCCTCCCGTACTTTTACACGCCCTCTAAATTTCTGCGAAAAATAAATTATTGTTGTAATTCTTTGAAATAGTTTTTTAAATTGACTGATTAAGTGATTATACAAATTGGCTGGTTTGATAGCATCGAATTCTTGTCGAGAAAGGAGAATTAGAGTCATCCCTCAAAAAAAAAAAGAGGAGAATTAGAGTCTAGAGGATAGATGTGGGTTGGATTGGTGCTGGTTACTTGTGTGTGTGGCAGCGTGCGACTGAGAGATGGAAGTTGGGAGGAAACACGTGA
Protein sequence

>MS.gene008341.t1

MAPVSLPPGFRFHPTDEELVSYYLKRKINGRRIELEIIPEVDLYKCEPWDLPGKSLLPGKDLEWYFFSPRDRKYPNGSRTNRATKSGYWKATGKDRKVNAQTRAVGMKKTLVYYRGRAPHGSRTGWVMHEYRLDERECDNPSAGLQDAYALCRIFKKSTVIAPKVGEQYVNNVTWHANHMTSDQSSSIELYSEGRDEAIGSSSYLMPWDPSTSQNMNGTNTLNNNGGNVTRDDGIWTQFLSEDLLNIPISSSFPNYGSTPNYPPSKVDIALECARMQHRFSLPPLEVEDFPQVGMNSELKMTRLVSGSMSGTRNETDILQEILSVAQASQELINQSNYSHAFGGNENYATDHESDFTFMVGNNYNHVTDHMSSMRYIDDKAWKDPNTRSIEIGDLDNDFKAERMVENLRWVGMSSNDLEKSFMEEHQKIVPIEDISSFKTNRKENEVQVESEQPNINKETNDGNIDNFSMGFINDNDPNENFIDDGNIDYSNSTSYEVVEETTKRATERWKLGGNT