AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene008580

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene008580.t1 MTR_3g031220 90.643 513 36 2 1 506 1 508 0.0 900
MS.gene008580.t1 MTR_3g031220 92.208 385 23 1 1 378 1 385 0.0 687
MS.gene008580.t1 MTR_3g031220 54.054 74 29 2 349 418 185 257 8.43e-17 82.8
MS.gene008580.t1 MTR_5g074400 56.690 568 161 19 1 505 35 580 5.49e-161 469
MS.gene008580.t1 MTR_7g071120 47.925 482 173 21 85 506 29 492 9.44e-121 363
MS.gene008580.t1 MTR_4g013260 46.737 475 191 16 61 505 47 489 3.67e-105 323
MS.gene008580.t1 MTR_5g094430 44.019 418 182 11 40 422 28 428 2.84e-91 289
MS.gene008580.t1 MTR_5g094430 40.625 96 54 2 358 453 200 292 1.04e-13 73.9
MS.gene008580.t1 MTR_3g009470 40.969 454 173 11 60 422 110 559 3.23e-86 280
MS.gene008580.t1 MTR_3g009470 54.430 79 34 2 358 435 280 357 8.48e-16 80.9
MS.gene008580.t1 MTR_3g009470 48.387 93 37 4 178 267 486 570 1.74e-15 79.7
MS.gene008580.t1 MTR_3g056100 58.025 243 87 4 188 420 96 333 9.53e-85 269
MS.gene008580.t1 MTR_3g056100 47.191 89 41 3 178 265 262 345 1.55e-16 82.4
MS.gene008580.t1 MTR_5g094430 59.322 236 87 4 190 422 65 294 1.47e-84 267
MS.gene008580.t1 MTR_5g094430 52.000 75 31 2 178 251 221 291 1.28e-16 82.4
MS.gene008580.t1 MTR_5g094430 59.322 236 87 4 190 422 87 316 1.76e-84 268
MS.gene008580.t1 MTR_5g094430 52.000 75 31 2 178 251 243 313 1.33e-16 82.4
MS.gene008580.t1 MTR_3g056100 58.025 243 87 4 188 420 240 477 1.04e-83 271
MS.gene008580.t1 MTR_3g056100 47.191 89 41 3 178 265 406 489 1.72e-16 82.8
MS.gene008580.t1 MTR_3g056100 57.806 237 84 4 188 420 96 320 1.97e-83 265
MS.gene008580.t1 MTR_3g056100 47.191 89 41 3 178 265 249 332 1.59e-16 82.4
MS.gene008580.t1 MTR_5g042920 51.439 278 126 5 180 452 140 413 2.89e-83 265
MS.gene008580.t1 MTR_3g056100 57.806 237 84 4 188 420 240 464 1.05e-82 268
MS.gene008580.t1 MTR_3g056100 47.191 89 41 3 178 265 393 476 1.60e-16 82.8
MS.gene008580.t1 MTR_7g011820 40.534 412 191 11 41 426 95 478 4.06e-82 264
MS.gene008580.t1 MTR_7g011820 43.243 111 51 3 178 280 401 507 1.07e-15 80.1
MS.gene008580.t1 MTR_7g011820 44.340 106 43 3 358 461 228 319 2.03e-15 79.3
MS.gene008580.t1 MTR_7g080000 39.367 442 182 13 52 420 66 494 5.78e-77 255
MS.gene008580.t1 MTR_7g080000 38.889 126 52 4 325 449 217 318 2.56e-14 76.3
MS.gene008580.t1 MTR_7g100510 51.489 235 109 2 188 417 186 420 1.43e-73 239
MS.gene008580.t1 MTR_7g100510 50.000 76 37 1 192 266 362 437 2.19e-15 78.6
MS.gene008580.t1 MTR_4g082580 49.421 259 86 6 163 420 126 340 6.25e-73 236
MS.gene008580.t1 MTR_3g009470 36.585 410 165 10 60 378 110 515 1.79e-59 204
MS.gene008580.t1 MTR_3g009470 54.430 79 34 2 358 435 280 357 4.65e-16 81.3
MS.gene008580.t1 MTR_5g097490 41.111 270 131 5 178 437 80 331 1.62e-57 196
MS.gene008580.t1 MTR_4g130900 38.951 267 145 5 166 420 161 421 1.07e-46 170
MS.gene008580.t1 MTR_4g130900 53.731 67 30 1 190 255 358 424 3.31e-16 81.6
MS.gene008580.t1 MTR_7g080020 48.128 187 80 3 316 486 451 636 3.85e-43 163
MS.gene008580.t1 MTR_5g097500 32.051 234 131 5 192 421 84 293 9.73e-35 132
MS.gene008580.t1 MTR_1g077780 65.476 84 29 0 334 417 38 121 6.07e-33 122
MS.gene008580.t1 MTR_1g077780 41.111 90 47 3 180 264 47 135 2.19e-14 70.9
MS.gene008580.t1 MTR_8g007270 59.783 92 36 1 323 414 120 210 3.52e-31 120
MS.gene008580.t1 MTR_8g007270 52.113 71 29 2 177 246 144 210 2.20e-16 79.0
MS.gene008580.t1 MTR_3g095080 64.865 74 26 0 341 414 151 224 5.70e-29 115
MS.gene008580.t1 MTR_3g095080 47.887 71 32 2 177 246 158 224 1.34e-14 73.9
MS.gene008580.t1 MTR_3g095080 64.865 74 26 0 341 414 127 200 6.26e-29 114
MS.gene008580.t1 MTR_3g095080 47.887 71 32 2 177 246 134 200 1.84e-14 73.2
MS.gene008580.t1 MTR_5g074200 47.761 134 54 4 171 294 200 327 9.06e-28 114
MS.gene008580.t1 MTR_5g074200 48.148 81 38 2 358 435 220 299 2.92e-15 77.4
MS.gene008580.t1 MTR_8g092140 64.000 75 26 1 341 414 142 216 1.74e-27 110
MS.gene008580.t1 MTR_8g092140 56.140 57 24 1 191 246 160 216 1.31e-14 73.9
MS.gene008580.t1 MTR_2g033820 37.895 190 85 3 342 499 187 375 8.14e-27 112
MS.gene008580.t1 MTR_2g033820 46.512 86 45 1 191 275 203 288 1.68e-16 81.6
MS.gene008580.t1 MTR_1g015140 61.842 76 28 1 339 414 84 158 2.24e-26 105
MS.gene008580.t1 MTR_1g015140 47.222 72 33 2 177 247 92 159 1.13e-15 75.1
MS.gene008580.t1 MTR_5g043880 57.647 85 35 1 337 420 103 187 2.80e-26 108
MS.gene008580.t1 MTR_5g043880 47.222 72 33 2 180 246 109 180 2.36e-12 67.8
MS.gene008580.t1 MTR_7g109800 49.091 110 50 2 342 447 129 236 3.17e-26 108
MS.gene008580.t1 MTR_7g109800 43.750 96 47 3 191 283 145 236 5.28e-16 79.0
MS.gene008580.t1 MTR_5g091390 62.667 75 28 0 344 418 143 217 6.25e-26 108
MS.gene008580.t1 MTR_5g091390 52.239 67 31 1 191 256 157 223 3.21e-14 73.9
MS.gene008580.t1 MTR_8g096730 56.250 80 35 0 337 416 49 128 8.26e-26 103
MS.gene008580.t1 MTR_8g096730 50.000 72 31 2 177 247 60 127 1.78e-17 79.7
MS.gene008580.t1 MTR_4g094588 61.333 75 29 0 344 418 164 238 1.25e-25 107
MS.gene008580.t1 MTR_4g094588 41.905 105 60 1 191 294 178 282 6.64e-18 85.5
MS.gene008580.t1 MTR_1g086790 52.747 91 43 0 342 432 142 232 1.33e-25 107
MS.gene008580.t1 MTR_1g086790 42.105 95 48 3 166 253 127 221 2.97e-15 77.4
MS.gene008580.t1 MTR_7g079010 55.172 87 39 0 328 414 111 197 1.64e-25 104
MS.gene008580.t1 MTR_7g079010 58.621 58 23 1 191 247 141 198 2.46e-15 75.5
MS.gene008580.t1 MTR_3g104750 53.488 86 36 1 333 414 75 160 1.84e-25 102
MS.gene008580.t1 MTR_3g104750 47.222 72 33 2 177 247 94 161 2.72e-15 73.9
MS.gene008580.t1 MTR_7g028415 54.321 81 37 0 349 429 84 164 1.24e-24 100
MS.gene008580.t1 MTR_7g028415 50.000 72 31 2 177 247 83 150 1.80e-15 74.7
MS.gene008580.t1 MTR_7g028710 54.321 81 37 0 349 429 84 164 1.24e-24 100
MS.gene008580.t1 MTR_7g028710 50.000 72 31 2 177 247 83 150 1.80e-15 74.7
MS.gene008580.t1 MTR_4g132430 54.430 79 35 1 340 417 109 187 2.20e-24 104
MS.gene008580.t1 MTR_4g132430 37.113 97 55 3 161 251 93 189 2.63e-13 71.6
MS.gene008580.t1 MTR_4g107970 46.018 113 51 4 310 417 131 238 2.67e-24 106
MS.gene008580.t1 MTR_4g107970 50.000 62 29 2 191 250 178 239 4.88e-13 71.6
MS.gene008580.t1 MTR_4g107970 53.846 78 35 1 341 417 238 315 4.92e-24 106
MS.gene008580.t1 MTR_4g107970 50.000 62 29 2 191 250 255 316 6.74e-13 71.6
MS.gene008580.t1 MTR_2g023930 54.430 79 35 1 340 417 287 365 5.14e-24 105
MS.gene008580.t1 MTR_2g023930 39.130 92 50 3 164 249 274 365 1.96e-13 73.2
MS.gene008580.t1 MTR_8g092010 54.795 73 33 0 345 417 95 167 6.13e-24 99.4
MS.gene008580.t1 MTR_8g092010 45.946 74 35 2 177 249 98 167 9.87e-14 70.1
MS.gene008580.t1 MTR_7g110720 38.621 145 66 4 304 447 143 265 8.17e-24 103
MS.gene008580.t1 MTR_7g110720 44.000 75 40 2 192 264 190 264 1.51e-13 72.8
MS.gene008580.t1 MTR_4g094412 55.128 78 34 1 342 418 218 295 8.34e-24 104
MS.gene008580.t1 MTR_4g094412 53.226 62 27 2 192 251 235 296 1.00e-14 77.0
MS.gene008580.t1 MTR_3g053330 46.591 88 46 1 331 417 224 311 8.58e-24 104
MS.gene008580.t1 MTR_3g053330 41.975 81 45 2 192 270 252 332 1.97e-13 72.8
MS.gene008580.t1 MTR_4g094412 55.128 78 34 1 342 418 227 304 8.80e-24 104
MS.gene008580.t1 MTR_4g094412 53.226 62 27 2 192 251 244 305 1.21e-14 76.6
MS.gene008580.t1 MTR_4g132430 54.430 79 35 1 340 417 243 321 1.03e-23 104
MS.gene008580.t1 MTR_4g132430 37.113 97 55 3 161 251 227 323 5.72e-13 71.2
MS.gene008580.t1 MTR_2g088000 54.430 79 35 1 340 417 331 409 1.40e-23 104
MS.gene008580.t1 MTR_2g088000 34.211 114 71 3 159 270 319 430 1.62e-12 70.1
MS.gene008580.t1 MTR_7g110720 38.889 144 65 4 305 447 171 292 1.70e-23 103
MS.gene008580.t1 MTR_7g110720 44.000 75 40 2 192 264 217 291 1.79e-13 72.8
MS.gene008580.t1 MTR_4g122530 53.488 86 40 0 342 427 192 277 2.53e-23 102
MS.gene008580.t1 MTR_4g122530 57.377 61 25 1 191 250 208 268 8.52e-15 76.6
MS.gene008580.t1 MTR_3g095040 54.667 75 34 0 344 418 104 178 5.01e-23 97.4
MS.gene008580.t1 MTR_3g095040 45.333 75 36 2 177 250 108 178 1.86e-13 69.7
MS.gene008580.t1 MTR_7g009730 54.667 75 33 1 341 414 202 276 2.05e-22 101
MS.gene008580.t1 MTR_7g009730 51.613 62 28 2 191 250 219 280 6.94e-13 71.2
MS.gene008580.t1 MTR_4g094908 43.636 110 46 3 314 422 237 331 8.54e-22 97.1
MS.gene008580.t1 MTR_4g094908 50.000 66 31 2 192 255 267 332 4.15e-14 73.9
MS.gene008580.t1 MTR_2g045360 52.564 78 36 1 341 417 194 271 1.21e-21 97.8
MS.gene008580.t1 MTR_2g045360 45.205 73 38 2 192 262 212 284 9.83e-12 67.4
MS.gene008580.t1 MTR_4g049760 43.564 101 56 1 319 418 251 351 1.26e-21 98.6
MS.gene008580.t1 MTR_4g049760 33.628 113 69 3 170 276 265 377 1.83e-12 70.1
MS.gene008580.t1 MTR_1g009613 40.690 145 74 4 276 418 189 323 1.87e-21 95.9
MS.gene008580.t1 MTR_1g009613 48.571 70 34 2 192 259 263 332 1.83e-12 68.9
MS.gene008580.t1 MTR_4g049790 51.250 80 38 1 340 418 294 373 2.57e-21 97.8
MS.gene008580.t1 MTR_4g049790 35.652 115 68 3 168 276 285 399 1.70e-14 76.3
MS.gene008580.t1 MTR_3g106060 54.795 73 30 3 345 414 123 195 1.54e-20 92.4
MS.gene008580.t1 MTR_3g106060 32.768 177 92 8 105 269 53 214 1.10e-14 75.1
MS.gene008580.t1 MTR_5g016610 53.165 79 36 1 339 416 180 258 2.26e-20 91.3
MS.gene008580.t1 MTR_5g016610 54.386 57 24 2 192 246 200 256 3.01e-13 70.5
MS.gene008580.t1 MTR_7g062220 64.912 57 20 0 358 414 124 180 3.09e-20 92.0
MS.gene008580.t1 MTR_7g062220 59.649 57 22 1 191 246 124 180 1.95e-14 74.7
MS.gene008580.t1 MTR_1g078260 56.338 71 30 1 345 414 234 304 4.70e-20 93.2
MS.gene008580.t1 MTR_1g078260 45.455 77 39 3 191 265 247 322 6.24e-12 68.2
MS.gene008580.t1 MTR_6g086555 54.667 75 33 1 344 417 192 266 7.96e-20 92.0
MS.gene008580.t1 MTR_6g086555 39.796 98 51 3 182 271 197 294 8.51e-13 70.5
MS.gene008580.t1 MTR_4g127040 47.368 95 44 3 338 431 228 317 1.45e-19 90.1
MS.gene008580.t1 MTR_4g127040 46.032 63 32 2 192 252 246 308 3.57e-11 64.7
MS.gene008580.t1 MTR_4g007060 45.283 106 42 5 356 445 126 231 1.80e-19 89.0
MS.gene008580.t1 MTR_4g007060 53.333 60 26 2 192 249 129 188 1.76e-15 77.4
MS.gene008580.t1 MTR_4g007060 45.714 105 41 5 356 444 160 264 2.65e-19 89.4
MS.gene008580.t1 MTR_4g007060 53.333 60 26 2 192 249 163 222 2.35e-15 77.4
MS.gene008580.t1 MTR_6g046600 67.241 58 19 0 207 264 18 75 5.53e-19 83.2
MS.gene008580.t1 MTR_2g105060 54.688 64 28 1 356 418 92 155 2.07e-18 85.1
MS.gene008580.t1 MTR_2g105060 50.000 60 28 2 192 249 95 154 5.78e-14 72.0
MS.gene008580.t1 MTR_2g105060 54.688 64 28 1 356 418 167 230 3.38e-18 85.9
MS.gene008580.t1 MTR_2g105060 50.000 60 28 2 192 249 170 229 6.74e-14 73.2
MS.gene008580.t1 MTR_1g013790 39.048 105 49 4 356 450 99 198 4.89e-18 84.3
MS.gene008580.t1 MTR_1g013790 48.333 60 29 2 192 249 102 161 1.95e-12 67.8
MS.gene008580.t1 MTR_1g013760 47.945 73 35 2 345 414 125 197 1.10e-17 84.0
MS.gene008580.t1 MTR_1g013760 50.877 57 26 2 192 246 141 197 4.96e-13 70.1
MS.gene008580.t1 MTR_1g070455 50.000 78 38 1 338 414 273 350 1.12e-17 85.1
MS.gene008580.t1 MTR_1g070455 54.237 59 25 2 192 248 294 352 4.47e-13 70.9
MS.gene008580.t1 MTR_3g108960 48.101 79 40 1 338 415 294 372 1.65e-16 82.0
MS.gene008580.t1 MTR_8g087000 46.667 75 39 1 359 432 78 152 3.73e-16 78.6
MS.gene008580.t1 MTR_8g087000 38.710 93 53 3 192 282 78 168 1.35e-12 68.2
MS.gene008580.t1 MTR_2g016770 44.211 95 50 2 335 428 14 106 4.34e-16 77.8
MS.gene008580.t1 MTR_2g016770 39.450 109 62 4 192 296 36 144 1.02e-13 70.9
MS.gene008580.t1 MTR_8g087000 46.667 75 39 1 359 432 77 151 4.39e-16 78.2
MS.gene008580.t1 MTR_8g087000 38.710 93 53 3 192 282 77 167 1.56e-12 67.8
MS.gene008580.t1 MTR_4g047580 32.540 126 82 2 328 452 251 374 4.50e-16 81.3
MS.gene008580.t1 MTR_2g016770 44.211 95 50 2 335 428 6 98 4.77e-16 77.4
MS.gene008580.t1 MTR_2g016770 39.450 109 62 4 192 296 28 136 9.83e-14 70.5
MS.gene008580.t1 MTR_2g024350 56.250 64 26 2 192 253 9 72 1.29e-15 76.6
MS.gene008580.t1 MTR_2g024350 55.000 60 26 1 359 417 9 68 6.61e-15 74.3
MS.gene008580.t1 MTR_2g083870 50.794 63 30 1 359 420 81 143 2.58e-15 76.3
MS.gene008580.t1 MTR_1g099600 42.353 85 47 2 339 422 167 250 5.03e-15 76.3
MS.gene008580.t1 MTR_1g099600 42.105 76 38 3 190 263 184 255 9.53e-11 63.5
MS.gene008580.t1 MTR_7g109600 46.575 73 38 1 359 430 54 126 5.43e-15 75.5
MS.gene008580.t1 MTR_7g109600 50.000 68 32 2 192 257 54 121 1.29e-13 71.2
MS.gene008580.t1 MTR_2g024380 56.250 64 26 2 192 253 252 315 9.01e-15 77.0
MS.gene008580.t1 MTR_2g024380 55.000 60 26 1 359 417 252 311 3.64e-14 75.1
MS.gene008580.t1 MTR_0117s0040 48.052 77 37 2 339 414 57 131 1.12e-14 74.3
MS.gene008580.t1 MTR_0117s0040 46.269 67 31 3 185 246 65 131 9.50e-11 62.8
MS.gene008580.t1 MTR_8g067650 53.521 71 30 3 188 256 336 405 1.41e-14 76.6
MS.gene008580.t1 MTR_8g067650 40.964 83 48 1 337 418 318 400 3.25e-12 69.3
MS.gene008580.t1 MTR_8g028565 45.349 86 45 2 359 442 156 241 1.60e-14 75.1
MS.gene008580.t1 MTR_8g098945 45.946 74 39 1 357 429 128 201 3.36e-14 73.2
MS.gene008580.t1 MTR_8g098945 45.946 74 34 3 192 263 130 199 2.17e-12 67.8
MS.gene008580.t1 MTR_5g067680 37.615 109 52 4 181 274 192 299 6.89e-14 73.6
MS.gene008580.t1 MTR_5g067680 46.552 58 28 1 358 412 202 259 7.48e-11 64.3
MS.gene008580.t1 MTR_8g067635 52.113 71 31 3 188 256 346 415 8.60e-14 74.3
MS.gene008580.t1 MTR_8g067635 48.438 64 32 1 356 418 347 410 3.34e-12 69.3
MS.gene008580.t1 MTR_1g077760 67.500 40 13 0 339 378 95 134 2.26e-13 67.8
MS.gene008580.t1 MTR_2g032030 47.692 65 33 1 359 422 268 332 2.39e-13 72.4
MS.gene008580.t1 MTR_2g032030 47.692 65 33 1 359 422 268 332 3.00e-13 72.0
MS.gene008580.t1 MTR_7g079040 46.667 75 38 2 359 431 155 229 4.79e-13 70.5
MS.gene008580.t1 MTR_7g079040 33.529 170 96 7 166 333 130 284 4.71e-12 67.8
MS.gene008580.t1 MTR_8g069935 48.649 74 33 3 190 261 330 400 1.61e-12 70.1
MS.gene008580.t1 MTR_8g069935 43.548 62 34 1 358 418 331 392 2.37e-11 66.2
MS.gene008580.t1 MTR_3g095080 65.000 40 14 0 341 380 151 190 2.83e-12 65.9
MS.gene008580.t1 MTR_5g093540 40.000 135 44 7 172 294 140 249 4.86e-12 66.6
MS.gene008580.t1 MTR_3g090860 51.724 58 24 2 191 244 133 190 5.06e-12 67.8
MS.gene008580.t1 MTR_3g090860 37.719 114 58 3 357 467 132 235 1.63e-11 66.2
MS.gene008580.t1 MTR_8g099350 51.724 58 24 2 191 244 132 189 6.56e-12 67.4
MS.gene008580.t1 MTR_4g021780 43.210 81 41 2 169 249 5 80 7.28e-12 62.8
MS.gene008580.t1 MTR_6g038890 55.556 45 20 0 340 384 170 214 1.24e-11 64.7
MS.gene008580.t1 MTR_4g007060 50.000 54 26 1 356 408 160 213 3.64e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene008580.t1 AT2G38470 43.038 553 232 19 1 505 1 518 9.80e-110 336
MS.gene008580.t1 AT5G07100 49.030 361 90 10 62 420 28 296 3.73e-95 291
MS.gene008580.t1 AT4G26640 42.991 428 190 10 40 427 37 450 3.30e-92 292
MS.gene008580.t1 AT4G26640 43.541 418 187 10 51 427 1 410 5.96e-92 290
MS.gene008580.t1 AT2G30250 46.528 432 171 14 1 417 1 387 3.09e-91 284
MS.gene008580.t1 AT2G30250 55.385 65 28 1 192 255 329 393 9.59e-16 79.7
MS.gene008580.t1 AT2G03340 43.970 398 187 9 39 424 108 481 4.09e-90 285
MS.gene008580.t1 AT2G03340 60.000 70 27 1 358 427 250 318 1.37e-19 92.0
MS.gene008580.t1 AT4G26640 56.855 248 90 4 190 427 34 274 3.85e-87 273
MS.gene008580.t1 AT4G26640 55.714 70 28 2 356 423 33 101 7.44e-15 76.6
MS.gene008580.t1 AT4G26640 56.855 248 90 4 190 427 34 274 3.85e-87 273
MS.gene008580.t1 AT4G26640 55.714 70 28 2 356 423 33 101 7.44e-15 76.6
MS.gene008580.t1 AT4G26640 56.855 248 90 4 190 427 34 274 3.85e-87 273
MS.gene008580.t1 AT4G26640 55.714 70 28 2 356 423 33 101 7.44e-15 76.6
MS.gene008580.t1 AT4G26640 56.855 248 90 4 190 427 34 274 3.85e-87 273
MS.gene008580.t1 AT4G26640 55.714 70 28 2 356 423 33 101 7.44e-15 76.6
MS.gene008580.t1 AT4G26640 56.855 248 90 4 190 427 138 378 2.77e-86 274
MS.gene008580.t1 AT1G13960 41.814 397 182 9 39 417 103 468 2.07e-83 268
MS.gene008580.t1 AT1G13960 52.273 88 27 2 351 424 208 294 9.23e-19 89.7
MS.gene008580.t1 AT5G07100 59.583 240 43 7 184 420 15 203 2.75e-83 257
MS.gene008580.t1 AT5G07100 59.583 240 43 7 184 420 15 203 2.75e-83 257
MS.gene008580.t1 AT5G07100 59.583 240 43 7 184 420 15 203 2.75e-83 257
MS.gene008580.t1 AT5G07100 59.583 240 43 7 184 420 15 203 2.75e-83 257
MS.gene008580.t1 AT1G13960 53.112 241 100 2 190 417 75 315 6.56e-79 251
MS.gene008580.t1 AT1G13960 52.273 88 27 2 351 424 55 141 6.65e-19 88.6
MS.gene008580.t1 AT3G01080 55.702 228 73 4 190 417 166 365 6.15e-73 238
MS.gene008580.t1 AT3G01080 55.702 228 73 4 190 417 204 403 8.65e-73 238
MS.gene008580.t1 AT4G26440 37.473 467 170 17 67 471 88 494 6.19e-71 236
MS.gene008580.t1 AT2G04880 45.059 253 110 8 185 420 105 345 1.81e-61 209
MS.gene008580.t1 AT2G37260 45.736 258 99 6 188 416 80 325 2.48e-59 199
MS.gene008580.t1 AT2G37260 45.736 258 99 6 188 416 82 327 2.60e-59 199
MS.gene008580.t1 AT2G37260 45.736 258 99 6 188 416 162 407 1.28e-58 200
MS.gene008580.t1 AT2G04880 42.804 271 114 5 185 420 105 369 2.50e-58 201
MS.gene008580.t1 AT4G30935 42.735 234 120 7 192 420 169 393 6.99e-49 175
MS.gene008580.t1 AT4G30935 36.879 141 79 4 163 302 307 438 1.95e-16 82.0
MS.gene008580.t1 AT4G12020 44.635 233 112 6 158 378 434 661 1.00e-46 175
MS.gene008580.t1 AT4G12020 52.459 61 28 1 357 417 467 526 3.00e-12 70.1
MS.gene008580.t1 AT4G12020 44.635 233 112 6 158 378 434 661 1.00e-46 175
MS.gene008580.t1 AT4G12020 52.459 61 28 1 357 417 467 526 3.00e-12 70.1
MS.gene008580.t1 AT4G12020 44.635 233 112 6 158 378 434 661 1.03e-46 175
MS.gene008580.t1 AT4G12020 52.459 61 28 1 357 417 467 526 3.06e-12 70.1
MS.gene008580.t1 AT4G12020 44.635 233 112 6 158 378 434 661 1.12e-46 175
MS.gene008580.t1 AT4G12020 52.459 61 28 1 357 417 467 526 3.09e-12 70.1
MS.gene008580.t1 AT4G12020 44.635 233 112 6 158 378 434 661 1.12e-46 175
MS.gene008580.t1 AT4G12020 52.459 61 28 1 357 417 467 526 3.09e-12 70.1
MS.gene008580.t1 AT4G12020 44.635 233 112 6 158 378 434 661 1.16e-46 175
MS.gene008580.t1 AT4G12020 52.459 61 28 1 357 417 467 526 3.28e-12 70.1
MS.gene008580.t1 AT4G12020 44.635 233 112 6 158 378 434 661 1.24e-46 175
MS.gene008580.t1 AT4G12020 52.459 61 28 1 357 417 467 526 3.22e-12 70.1
MS.gene008580.t1 AT4G12020 44.635 233 112 6 158 378 434 661 1.28e-46 175
MS.gene008580.t1 AT4G12020 52.459 61 28 1 357 417 467 526 3.25e-12 70.1
MS.gene008580.t1 AT4G12020 44.635 233 112 6 158 378 434 661 1.43e-46 175
MS.gene008580.t1 AT4G12020 52.459 61 28 1 357 417 467 526 3.34e-12 70.1
MS.gene008580.t1 AT4G12020 44.635 233 112 6 158 378 367 594 1.45e-46 175
MS.gene008580.t1 AT4G12020 52.459 61 28 1 357 417 400 459 3.49e-12 69.7
MS.gene008580.t1 AT4G12020 44.635 233 112 6 158 378 434 661 1.91e-46 174
MS.gene008580.t1 AT4G12020 52.459 61 28 1 357 417 467 526 4.15e-12 69.7
MS.gene008580.t1 AT5G56270 89.024 82 9 0 339 420 468 549 2.78e-45 169
MS.gene008580.t1 AT5G56270 37.445 227 96 6 67 254 117 336 1.37e-29 123
MS.gene008580.t1 AT5G56270 59.677 62 24 1 358 419 273 333 5.92e-16 81.3
MS.gene008580.t1 AT2G44745 67.105 76 25 0 339 414 126 201 2.06e-31 121
MS.gene008580.t1 AT2G44745 52.113 71 29 2 177 246 135 201 1.72e-16 79.0
MS.gene008580.t1 AT4G18170 53.636 110 44 2 315 417 122 231 3.72e-29 117
MS.gene008580.t1 AT4G18170 47.436 78 36 2 178 250 155 232 1.92e-15 77.8
MS.gene008580.t1 AT4G39410 64.474 76 27 0 339 414 204 279 2.57e-28 114
MS.gene008580.t1 AT4G39410 43.000 100 47 4 177 275 213 303 1.66e-15 77.8
MS.gene008580.t1 AT1G29860 64.935 77 27 0 342 418 120 196 1.68e-27 112
MS.gene008580.t1 AT1G29860 58.333 60 24 1 191 249 136 195 3.63e-15 76.3
MS.gene008580.t1 AT1G55600 60.494 81 32 0 337 417 286 366 3.08e-27 115
MS.gene008580.t1 AT1G55600 54.430 79 30 2 179 251 290 368 6.56e-17 83.6
MS.gene008580.t1 AT5G49520 64.198 81 28 1 342 421 205 285 5.19e-27 113
MS.gene008580.t1 AT5G49520 51.389 72 34 1 191 261 221 292 1.69e-15 79.0
MS.gene008580.t1 AT1G69310 58.140 86 35 1 337 421 126 211 6.93e-27 110
MS.gene008580.t1 AT1G69310 41.414 99 50 3 153 246 108 203 2.91e-13 70.9
MS.gene008580.t1 AT1G69310 58.140 86 35 1 337 421 126 211 6.93e-27 110
MS.gene008580.t1 AT1G69310 41.414 99 50 3 153 246 108 203 2.91e-13 70.9
MS.gene008580.t1 AT1G69310 58.140 86 35 1 337 421 126 211 6.93e-27 110
MS.gene008580.t1 AT1G69310 41.414 99 50 3 153 246 108 203 2.91e-13 70.9
MS.gene008580.t1 AT1G64000 58.750 80 33 0 335 414 91 170 1.73e-26 106
MS.gene008580.t1 AT1G64000 56.897 58 24 1 191 247 114 171 7.50e-16 76.6
MS.gene008580.t1 AT3G01970 56.471 85 37 0 345 429 52 136 1.87e-26 105
MS.gene008580.t1 AT3G01970 50.704 71 30 2 177 246 55 121 2.22e-14 70.9
MS.gene008580.t1 AT4G04450 40.769 130 64 2 332 460 172 289 4.96e-26 110
MS.gene008580.t1 AT4G04450 34.454 119 69 3 150 266 164 275 8.67e-14 73.9
MS.gene008580.t1 AT5G26170 60.000 70 28 0 345 414 100 169 1.31e-25 103
MS.gene008580.t1 AT5G26170 47.887 71 32 2 177 246 103 169 1.99e-16 77.4
MS.gene008580.t1 AT3G01080 64.384 73 25 1 190 262 204 275 1.61e-25 107
MS.gene008580.t1 AT3G01080 55.224 67 29 1 358 424 205 270 1.03e-15 78.6
MS.gene008580.t1 AT5G13080 61.111 72 28 0 345 416 54 125 1.74e-25 102
MS.gene008580.t1 AT5G13080 51.389 72 30 2 177 247 57 124 1.89e-17 79.7
MS.gene008580.t1 AT4G04450 40.769 130 64 2 332 460 266 383 2.32e-25 109
MS.gene008580.t1 AT4G04450 34.454 119 69 3 150 266 258 369 1.16e-13 73.9
MS.gene008580.t1 AT5G41570 59.211 76 31 0 339 414 79 154 2.58e-25 103
MS.gene008580.t1 AT5G41570 56.897 58 24 1 191 247 98 155 1.03e-15 75.9
MS.gene008580.t1 AT5G46350 59.740 77 31 0 344 420 169 245 4.23e-25 106
MS.gene008580.t1 AT5G46350 38.168 131 66 5 181 306 169 289 1.96e-15 77.8
MS.gene008580.t1 AT5G15130 48.077 104 39 2 341 443 168 257 4.35e-25 108
MS.gene008580.t1 AT5G15130 41.772 79 40 3 191 267 185 259 1.86e-12 70.1
MS.gene008580.t1 AT5G15130 48.077 104 39 2 341 443 210 299 4.96e-25 108
MS.gene008580.t1 AT5G15130 41.772 79 40 3 191 267 227 301 2.13e-12 69.7
MS.gene008580.t1 AT2G47260 59.211 76 31 0 342 417 158 233 1.02e-24 105
MS.gene008580.t1 AT2G47260 41.053 95 49 3 166 253 143 237 3.72e-14 74.3
MS.gene008580.t1 AT5G64810 59.155 71 29 0 345 415 97 167 1.17e-24 101
MS.gene008580.t1 AT5G64810 42.254 71 36 2 177 246 100 166 1.78e-13 69.7
MS.gene008580.t1 AT2G46130 57.143 77 33 0 338 414 10 86 2.27e-24 98.2
MS.gene008580.t1 AT2G46130 58.621 58 23 1 191 247 30 87 9.75e-16 73.6
MS.gene008580.t1 AT1G68150 53.409 88 37 2 332 418 212 296 4.15e-24 104
MS.gene008580.t1 AT1G68150 34.437 151 81 6 152 291 200 343 1.58e-16 81.6
MS.gene008580.t1 AT1G62300 55.696 79 34 1 340 417 294 372 7.89e-24 105
MS.gene008580.t1 AT1G62300 34.906 106 60 3 146 249 274 372 2.00e-13 73.2
MS.gene008580.t1 AT4G22070 51.724 87 41 1 332 417 271 357 8.23e-24 105
MS.gene008580.t1 AT4G22070 51.667 60 27 2 192 249 298 357 8.39e-13 71.2
MS.gene008580.t1 AT4G22070 51.724 87 41 1 332 417 271 357 8.23e-24 105
MS.gene008580.t1 AT4G22070 51.667 60 27 2 192 249 298 357 8.39e-13 71.2
MS.gene008580.t1 AT4G22070 51.724 87 41 1 332 417 271 357 8.23e-24 105
MS.gene008580.t1 AT4G22070 51.667 60 27 2 192 249 298 357 8.39e-13 71.2
MS.gene008580.t1 AT4G22070 51.724 87 41 1 332 417 271 357 8.23e-24 105
MS.gene008580.t1 AT4G22070 51.667 60 27 2 192 249 298 357 8.39e-13 71.2
MS.gene008580.t1 AT1G18860 52.564 78 36 1 341 417 222 299 2.51e-22 100
MS.gene008580.t1 AT1G18860 50.820 61 28 2 191 249 239 299 7.68e-12 68.2
MS.gene008580.t1 AT4G01720 55.844 77 33 1 342 417 223 299 2.70e-22 100
MS.gene008580.t1 AT4G01720 43.299 97 40 4 168 249 203 299 1.36e-13 73.6
MS.gene008580.t1 AT1G69310 54.651 86 34 2 337 421 126 207 4.28e-22 96.7
MS.gene008580.t1 AT2G23320 51.899 79 34 2 339 416 224 299 8.87e-21 93.6
MS.gene008580.t1 AT2G23320 56.140 57 23 2 192 246 241 297 5.32e-13 70.5
MS.gene008580.t1 AT4G24240 49.438 89 44 1 338 425 261 349 1.59e-20 93.6
MS.gene008580.t1 AT4G24240 45.882 85 39 4 167 246 256 338 7.81e-14 73.2
MS.gene008580.t1 AT4G31550 56.410 78 30 2 339 415 230 304 1.67e-20 92.8
MS.gene008580.t1 AT4G31550 57.895 57 22 2 192 246 247 303 7.15e-14 73.2
MS.gene008580.t1 AT4G31550 56.410 78 30 2 339 415 229 303 1.70e-20 92.8
MS.gene008580.t1 AT4G31550 57.895 57 22 2 192 246 246 302 7.15e-14 73.2
MS.gene008580.t1 AT3G62340 55.263 76 34 0 342 417 102 177 2.13e-20 91.7
MS.gene008580.t1 AT3G62340 48.000 75 34 2 181 250 104 178 3.47e-14 73.6
MS.gene008580.t1 AT2G24570 57.692 78 29 2 338 414 226 300 2.71e-20 92.0
MS.gene008580.t1 AT2G24570 50.704 71 33 2 192 260 244 314 4.08e-14 73.9
MS.gene008580.t1 AT2G46130 53.247 77 32 1 338 414 10 82 9.45e-20 84.7
MS.gene008580.t1 AT2G46130 53.448 58 22 2 191 247 30 83 3.18e-11 60.5
MS.gene008580.t1 AT2G21900 50.667 75 34 1 347 418 95 169 2.23e-19 87.0
MS.gene008580.t1 AT2G21900 34.483 116 63 4 147 249 53 168 8.78e-14 70.9
MS.gene008580.t1 AT5G28650 51.948 77 36 1 339 414 243 319 4.52e-19 89.0
MS.gene008580.t1 AT5G28650 48.438 64 31 2 192 253 263 326 1.04e-11 66.6
MS.gene008580.t1 AT1G80840 50.000 70 34 1 356 424 144 213 5.75e-19 87.8
MS.gene008580.t1 AT1G80840 50.000 60 28 2 192 249 147 206 2.08e-13 71.6
MS.gene008580.t1 AT2G30590 52.564 78 36 1 338 414 293 370 1.45e-18 87.8
MS.gene008580.t1 AT2G30590 54.237 59 25 2 192 248 314 372 6.51e-13 70.9
MS.gene008580.t1 AT3G04670 51.948 77 36 1 339 414 243 319 1.60e-18 87.0
MS.gene008580.t1 AT3G04670 50.000 64 30 2 192 253 263 326 1.67e-12 68.9
MS.gene008580.t1 AT4G31800 50.725 69 32 2 351 417 103 171 1.70e-18 85.5
MS.gene008580.t1 AT4G31800 42.667 75 41 2 192 264 112 186 1.99e-13 70.5
MS.gene008580.t1 AT4G31800 50.725 69 32 2 351 417 168 236 3.00e-18 85.9
MS.gene008580.t1 AT4G31800 42.667 75 41 2 192 264 177 251 3.39e-13 70.9
MS.gene008580.t1 AT5G43290 61.017 59 23 0 356 414 112 170 3.58e-18 85.1
MS.gene008580.t1 AT5G43290 62.069 58 21 1 190 246 113 170 1.50e-15 77.4
MS.gene008580.t1 AT2G25000 50.000 62 30 1 357 417 102 163 1.45e-17 82.4
MS.gene008580.t1 AT2G25000 44.286 70 37 2 192 259 104 173 3.66e-12 66.6
MS.gene008580.t1 AT2G25000 50.000 62 30 1 357 417 102 163 1.45e-17 82.4
MS.gene008580.t1 AT2G25000 44.286 70 37 2 192 259 104 173 3.66e-12 66.6
MS.gene008580.t1 AT2G25000 50.000 62 30 1 357 417 124 185 3.05e-17 82.0
MS.gene008580.t1 AT2G25000 44.286 70 37 2 192 259 126 195 5.87e-12 66.2
MS.gene008580.t1 AT2G25000 50.000 62 30 1 357 417 145 206 4.26e-17 82.0
MS.gene008580.t1 AT2G25000 44.286 70 37 2 192 259 147 216 8.20e-12 66.2
MS.gene008580.t1 AT4G23550 42.553 94 49 2 347 435 129 222 6.75e-17 82.0
MS.gene008580.t1 AT1G69810 45.570 79 41 2 341 417 128 206 8.36e-17 82.0
MS.gene008580.t1 AT1G69810 45.570 79 41 2 341 417 186 264 1.05e-16 82.4
MS.gene008580.t1 AT4G01250 46.512 86 44 2 359 442 129 214 1.23e-15 78.2
MS.gene008580.t1 AT4G01250 34.959 123 69 5 192 311 129 243 3.70e-11 64.7
MS.gene008580.t1 AT1G29280 51.667 60 28 1 359 417 75 134 5.94e-15 75.5
MS.gene008580.t1 AT1G29280 47.619 63 31 2 192 252 75 137 5.84e-12 66.6
MS.gene008580.t1 AT3G58710 35.461 141 78 4 289 424 4 136 2.39e-14 73.9
MS.gene008580.t1 AT3G58710 46.753 77 38 3 192 266 72 147 3.11e-11 64.3
MS.gene008580.t1 AT3G58710 50.746 67 30 2 359 424 71 135 6.34e-14 72.4
MS.gene008580.t1 AT3G58710 46.753 77 38 3 192 266 71 146 3.08e-11 64.3
MS.gene008580.t1 AT5G45260 33.588 131 79 3 141 267 1162 1288 6.41e-14 75.5
MS.gene008580.t1 AT5G52830 42.353 85 47 2 339 422 147 230 8.61e-14 73.2
MS.gene008580.t1 AT5G52830 34.615 130 67 6 190 311 164 283 2.50e-12 68.6
MS.gene008580.t1 AT2G34830 38.542 96 50 2 334 420 192 287 1.53e-13 73.2
MS.gene008580.t1 AT2G34830 38.542 96 50 2 334 420 183 278 1.60e-13 72.8
MS.gene008580.t1 AT1G30650 49.206 63 31 1 359 420 218 280 5.35e-13 71.2
MS.gene008580.t1 AT2G40740 43.750 80 38 3 191 263 173 252 4.60e-12 67.4
MS.gene008580.t1 AT5G45050 47.692 65 33 1 359 422 1042 1106 5.89e-12 68.9
MS.gene008580.t1 AT5G45050 31.977 172 88 7 150 301 1000 1162 3.95e-11 66.2
MS.gene008580.t1 AT2G40740 43.750 80 38 3 191 263 182 261 5.92e-12 67.0
MS.gene008580.t1 AT5G45050 49.206 63 31 1 359 420 1181 1243 5.94e-12 68.9
MS.gene008580.t1 AT5G45050 31.977 172 88 7 150 301 1139 1301 4.16e-11 66.2
MS.gene008580.t1 AT5G45050 49.206 63 31 1 359 420 1153 1215 6.12e-12 68.9
MS.gene008580.t1 AT5G45050 31.977 172 88 7 150 301 1111 1273 4.40e-11 66.2
MS.gene008580.t1 AT2G46400 33.333 96 60 2 336 427 82 177 1.84e-11 65.5
MS.gene008580.t1 AT2G46400 46.552 58 27 2 191 244 104 161 6.65e-11 63.9
MS.gene008580.t1 AT5G24110 46.032 63 30 2 186 244 108 170 3.59e-11 64.7
MS.gene008580.t1 AT4G11070 41.860 86 39 4 182 256 95 180 4.59e-11 63.9
MS.gene008580.t1 AT4G11070 42.529 87 37 5 182 256 127 212 6.50e-11 63.9

Find 110 sgRNAs with CRISPR-Local

Find 212 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTCCTCCTTCAAATCATTT+TGG 0.095807 3.3:-53752946 MS.gene008580:CDS
AAGAGAGGTGTAGGAGAAAT+AGG 0.219713 3.3:+53754296 None:intergenic
GGATACAATTGGAGAAAATA+TGG 0.221022 3.3:-53753174 MS.gene008580:CDS
GAGATCTTTCGGTGTCTTTA+AGG 0.223046 3.3:+53754393 None:intergenic
TTTCGGTGTCTTTAAGGTTT+TGG 0.266179 3.3:+53754399 None:intergenic
GTGCATTTGTAATAGCTTCT+TGG 0.268123 3.3:+53753123 None:intergenic
TGAAACATTGTTGTTGTTGA+TGG 0.270698 3.3:+53750963 None:intergenic
AGGAGGTGTAGACTTGAATT+TGG 0.275405 3.3:+53754328 None:intergenic
GGATACAGATGGAGGAAATA+TGG 0.277797 3.3:-53752450 MS.gene008580:CDS
TTTGGTCGGTTGGAGAATTA+AGG 0.278875 3.3:+53754417 None:intergenic
AACAATGTTTCACTTCATAA+TGG 0.317177 3.3:-53750952 MS.gene008580:CDS
GGAGGTGTAGACTTGAATTT+GGG 0.318965 3.3:+53754329 None:intergenic
GAGCAGACTTCTCATAAATC+TGG 0.327536 3.3:-53752853 MS.gene008580:CDS
ATCTTCTACAGGCTCCTCTT+TGG 0.343547 3.3:+53750831 None:intergenic
AATGAGATGATGCAGAATAA+TGG 0.359321 3.3:-53750919 MS.gene008580:CDS
AAATGAAACTCAAATGGATT+TGG 0.360393 3.3:-53752923 MS.gene008580:CDS
CCTTCCAAGCTCAACCAGTT+GGG 0.386902 3.3:-53753637 MS.gene008580:CDS
CTCTTGTTAGCCACAGGCTT+AGG 0.389420 3.3:+53753012 None:intergenic
CTAATAATGAAGGCTTCAAT+TGG 0.393130 3.3:-53753727 MS.gene008580:CDS
CGTGTTAATAATATTCTTAG+AGG 0.394717 3.3:-53750859 MS.gene008580:CDS
ACGTTGTTATCACTGCTCTT+AGG 0.396252 3.3:+53751100 None:intergenic
GTTGTTGTTGATGGAATTGT+TGG 0.400906 3.3:+53750972 None:intergenic
GAAAATGAGGGGATATCATT+AGG 0.402184 3.3:-53752546 MS.gene008580:CDS
TGAGAAGAGTTAAGGAGAAC+AGG 0.405323 3.3:+53754212 None:intergenic
TAATATTGCAGGAGAATAGA+AGG 0.406189 3.3:-53752570 MS.gene008580:intron
CACTTGATGATGAGATCTTT+CGG 0.406857 3.3:+53754382 None:intergenic
GTGTTCCTCTTGTTAGCCAC+AGG 0.416619 3.3:+53753006 None:intergenic
TCCTTCCAAGCTCAACCAGT+TGG 0.428599 3.3:-53753638 MS.gene008580:CDS
AAGGAACATTGCTTCAAGAT+AGG 0.432156 3.3:+53750788 None:intergenic
CATCATCTGATCTTCTACTT+AGG 0.434333 3.3:+53753196 None:intergenic
GTAGGAGAAATAGGAAGAGA+TGG 0.441968 3.3:+53754305 None:intergenic
TTAGCAAATGATCCGGTAGT+TGG 0.442580 3.3:+53753746 None:intergenic
GATACAGATGGAGGAAATAT+GGG 0.445361 3.3:-53752449 MS.gene008580:CDS
CCAAAATGATTTGAAGGAGG+AGG 0.450538 3.3:+53752946 None:intergenic
GTTGTTTGAACAACAACTCT+TGG 0.451286 3.3:+53752498 None:intergenic
GATCAGATGATGGATACAAT+TGG 0.451349 3.3:-53753185 MS.gene008580:CDS
GGATCATTTGCTAATAATGA+AGG 0.453023 3.3:-53753737 MS.gene008580:CDS
AAGTGTTGTCGGATCAAAAC+AGG 0.453220 3.3:-53754364 MS.gene008580:CDS
GAATAATTATGAGGAAAAGC+AGG 0.454776 3.3:-53753702 MS.gene008580:CDS
GAAGGAGAAAAGAGAGGTGT+AGG 0.456766 3.3:+53754287 None:intergenic
ATAGTTGTTTGCATTGGTAG+TGG 0.460987 3.3:+53751012 None:intergenic
GACTTACATGAGAAGAGTTA+AGG 0.463339 3.3:+53754204 None:intergenic
GACATTGATATTCTAGATGA+TGG 0.466100 3.3:-53752471 MS.gene008580:CDS
GGTATAGAAAAGTAAGAAGA+AGG 0.468052 3.3:+53754269 None:intergenic
GAAGGAGAAATTTGATGAGA+TGG 0.473926 3.3:+53753655 None:intergenic
GAGAATAGAAGGTGAAAATG+AGG 0.474869 3.3:-53752559 MS.gene008580:CDS
TTCATTATTAGCAAATGATC+CGG 0.475551 3.3:+53753739 None:intergenic
TCATTTCCAAAATGATTTGA+AGG 0.484750 3.3:+53752940 None:intergenic
GAAACCCAACTGGTTGAGCT+TGG 0.488238 3.3:+53753633 None:intergenic
CCCAACTGGTTGAGCTTGGA+AGG 0.489936 3.3:+53753637 None:intergenic
ATCTCATCATCAAGTGTTGT+CGG 0.493343 3.3:-53754375 MS.gene008580:CDS
AAAAGTGAGTCATCTTCTAC+AGG 0.494990 3.3:+53750820 None:intergenic
TATGGGCAGAAAGTAGTAAA+GGG 0.499601 3.3:-53752432 MS.gene008580:CDS
CAATTGGAAGAATAATTATG+AGG 0.501111 3.3:-53753711 MS.gene008580:CDS
GTCGAAGATTGAAACCCAAC+TGG 0.501195 3.3:+53753623 None:intergenic
AAAGTTGAGAGGGGTTTGGA+TGG 0.503570 3.3:-53753075 MS.gene008580:CDS
TTGTCGGATCAAAACAGGTC+GGG 0.503694 3.3:-53754359 MS.gene008580:CDS
AGAATAGAAGGTGAAAATGA+GGG 0.506773 3.3:-53752558 MS.gene008580:CDS
AAGGAGGTCAGAGAAGAAAG+AGG 0.508130 3.3:+53754436 None:intergenic
GATACAATTGGAGAAAATAT+GGG 0.511681 3.3:-53753173 MS.gene008580:CDS
AATGGATTTGGTTGCTACAC+CGG 0.512798 3.3:-53752911 MS.gene008580:CDS
GTTCCTGCACCACGTGGAAG+TGG 0.514980 3.3:-53751054 MS.gene008580:CDS
ATATGGGCAGAAAGTAGTAA+AGG 0.520616 3.3:-53752433 MS.gene008580:CDS
GATGGAATTGTTGGCACTTG+TGG 0.521173 3.3:+53750981 None:intergenic
GGAGAAATAGGAAGAGATGG+AGG 0.527547 3.3:+53754308 None:intergenic
TTTCCACTTCCACGTGGTGC+AGG 0.529414 3.3:+53751051 None:intergenic
TTGTTCATAGTTGTTTGCAT+TGG 0.537129 3.3:+53751006 None:intergenic
GAGGGGATATCATTAGGAGT+TGG 0.538191 3.3:-53752540 MS.gene008580:CDS
GTAGTGGTTTGTTGATAGAG+TGG 0.539439 3.3:+53751028 None:intergenic
AGCTCAGAAAGAGAAAAGCC+AGG 0.544999 3.3:+53754245 None:intergenic
CACTGCTCTTAGGTCTTGTG+AGG 0.545249 3.3:+53751110 None:intergenic
TCACTAGTAGAATTACTCTC+TGG 0.547481 3.3:+53753270 None:intergenic
CTACTTAGGATCTGAACTTG+TGG 0.548235 3.3:+53753210 None:intergenic
GCAGTGATAACAACGTATGA+AGG 0.549349 3.3:-53751093 MS.gene008580:CDS
GAAATAGGAAGAGATGGAGG+AGG 0.551676 3.3:+53754311 None:intergenic
CTAAGTAGAAGATCAGATGA+TGG 0.559081 3.3:-53753195 MS.gene008580:CDS
TACTACAAGTGCACAAACCC+AGG 0.561370 3.3:-53751162 MS.gene008580:CDS
AATGATCCGGTAGTTGGAGA+TGG 0.563554 3.3:+53753752 None:intergenic
ATCGATATCGATGAATTCTC+CGG 0.564317 3.3:+53752892 None:intergenic
GATGCAGAATAATGGATTCA+CGG 0.565573 3.3:-53750911 MS.gene008580:CDS
ATTCTTCCATCTCCAACTAC+CGG 0.576159 3.3:-53753758 MS.gene008580:CDS
TTTCCAAAATGATTTGAAGG+AGG 0.580319 3.3:+53752943 None:intergenic
TTCTAGATGATGGATACAGA+TGG 0.589347 3.3:-53752461 MS.gene008580:CDS
AGTTGGAAATAGAACAGTGA+GGG 0.589550 3.3:-53752523 MS.gene008580:CDS
TCTTAGAGGTAGAGCCAAAG+AGG 0.590764 3.3:-53750845 MS.gene008580:CDS
TAAGAAGAAGGAGAAAAGAG+AGG 0.593576 3.3:+53754281 None:intergenic
GGAGAATGTCAAGGCTGAAG+AGG 0.597173 3.3:-53753681 MS.gene008580:CDS
GAATAGAAGGTGAAAATGAG+GGG 0.598884 3.3:-53752557 MS.gene008580:CDS
TAAAGGGAAATCCAAATCCA+AGG 0.599938 3.3:-53752416 MS.gene008580:intron
GAGAATTCATCGATATCGAT+CGG 0.611266 3.3:-53752889 MS.gene008580:CDS
GGTCGGTTGGAGAATTAAGG+AGG 0.622030 3.3:+53754420 None:intergenic
CTAAGCCTGTGGCTAACAAG+AGG 0.622068 3.3:-53753011 MS.gene008580:CDS
GGTGTAGACTTGAATTTGGG+GGG 0.629490 3.3:+53754332 None:intergenic
ATACCAACAGGGATGGAACA+TGG 0.636942 3.3:-53753331 MS.gene008580:intron
CAGACTTCTCATAAATCTGG+AGG 0.638474 3.3:-53752850 MS.gene008580:CDS
AGGTGTAGACTTGAATTTGG+GGG 0.639825 3.3:+53754331 None:intergenic
TCATAATCATCCTAAGCCTG+TGG 0.651078 3.3:-53753022 MS.gene008580:CDS
ATTTGCAAGTGACGACGACG+AGG 0.651421 3.3:+53752969 None:intergenic
GTTTCAATCTTCGACCACCA+CGG 0.652304 3.3:-53753615 MS.gene008580:CDS
GTTGTCGGATCAAAACAGGT+CGG 0.656679 3.3:-53754360 MS.gene008580:CDS
CATGATGTTCCTGCACCACG+TGG 0.664697 3.3:-53751060 MS.gene008580:CDS
ATTACTGAGATAGTTTACAA+AGG 0.670402 3.3:-53753048 MS.gene008580:CDS
GGAAAAGCAGGAGAATGTCA+AGG 0.676731 3.3:-53753690 MS.gene008580:CDS
TAGATGATGGATACAGATGG+AGG 0.677154 3.3:-53752458 MS.gene008580:CDS
GAGGTCAGAGAAGAAAGAGG+AGG 0.687171 3.3:+53754439 None:intergenic
GAGGTGTAGACTTGAATTTG+GGG 0.712764 3.3:+53754330 None:intergenic
GAGTGGTTTCCACTTCCACG+TGG 0.715134 3.3:+53751045 None:intergenic
GAGTTGGAAATAGAACAGTG+AGG 0.718708 3.3:-53752524 MS.gene008580:CDS
TCAGAAAGAGAAAAGCCAGG+AGG 0.750551 3.3:+53754248 None:intergenic
GCAGAATAATGGATTCACGG+TGG 0.757425 3.3:-53750908 MS.gene008580:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTAATTTTATTAATATTGC+AGG - chr3.3:53752663-53752682 MS.gene008580:intron 10.0%
!!! TAATAAGATAATAATTTTTC+AGG + chr3.3:53753473-53753492 None:intergenic 10.0%
!!! TATTAATTTATGATTTTCTT+GGG - chr3.3:53753425-53753444 MS.gene008580:intron 10.0%
!!! TTATTAATTTATGATTTTCT+TGG - chr3.3:53753424-53753443 MS.gene008580:intron 10.0%
!! AAACTCTTTAAATTAATACT+CGG + chr3.3:53753577-53753596 None:intergenic 15.0%
!! TCAACTATAAAGTATAATTA+AGG + chr3.3:53751124-53751143 None:intergenic 15.0%
!! TCTAAATTAATAAATTTCTC+TGG + chr3.3:53753140-53753159 None:intergenic 15.0%
!! TTCTTGAAAAAAATTGTATA+TGG + chr3.3:53753693-53753712 None:intergenic 15.0%
!! TTGTTTACTAAACATAATAT+AGG - chr3.3:53754056-53754075 MS.gene008580:intron 15.0%
!!! AACAATTATGATTCATTTTT+AGG + chr3.3:53751282-53751301 None:intergenic 15.0%
!!! AGTTTTTCAATTTTTTACAT+TGG - chr3.3:53753501-53753520 MS.gene008580:intron 15.0%
!!! TCTAAAATAATAAATTTGTC+CGG + chr3.3:53753539-53753558 None:intergenic 15.0%
!!! TTTTATCATATCACATAAAA+TGG - chr3.3:53752515-53752534 MS.gene008580:CDS 15.0%
!! AATGAGTAAAATAAAACTAG+TGG + chr3.3:53754018-53754037 None:intergenic 20.0%
!! ATACAAGAATTAAATCGATA+TGG + chr3.3:53751233-53751252 None:intergenic 20.0%
!! ATATTCTTATTGGTCAAATT+TGG - chr3.3:53753905-53753924 MS.gene008580:intron 20.0%
!! ATTTAATTCTTGTATATGGT+TGG - chr3.3:53751238-53751257 MS.gene008580:intron 20.0%
!! CAATGTCTAAATATTCTTAT+TGG - chr3.3:53753895-53753914 MS.gene008580:intron 20.0%
!! TACACAAAATTAACAAAACT+AGG - chr3.3:53753639-53753658 MS.gene008580:CDS 20.0%
!! TATAATTAAGGTGATCAATT+TGG + chr3.3:53751112-53751131 None:intergenic 20.0%
!!! AACAACAACTTTTAAAAAGT+TGG + chr3.3:53752903-53752922 None:intergenic 20.0%
!!! ATCGATTTAATTCTTGTATA+TGG - chr3.3:53751234-53751253 MS.gene008580:intron 20.0%
!!! ATGAGTTTGATTTTCATATA+TGG + chr3.3:53751386-53751405 None:intergenic 20.0%
!!! ATTAACAAAACTAGGTATTT+TGG - chr3.3:53753647-53753666 MS.gene008580:CDS 20.0%
!!! TAATGACTTTTGAACTTTAA+AGG - chr3.3:53753337-53753356 MS.gene008580:intron 20.0%
!!! TATGTATTTTTCTCTTACTT+TGG - chr3.3:53751841-53751860 MS.gene008580:intron 20.0%
!!! TGTTAATTTTGTGTATCTTT+AGG + chr3.3:53753634-53753653 None:intergenic 20.0%
!!! TTTTTTAATTACCTTGGATT+TGG + chr3.3:53752842-53752861 None:intergenic 20.0%
! AACAAAGAAAAAAGTTGAGA+GGG - chr3.3:53752159-53752178 MS.gene008580:intron 25.0%
! AACAATGTTTCACTTCATAA+TGG - chr3.3:53754292-53754311 MS.gene008580:CDS 25.0%
! AACTTCCAAAGCATAAAAAA+AGG + chr3.3:53752980-53752999 None:intergenic 25.0%
! ACATTTAAGGAGTTAATTGA+GGG + chr3.3:53753071-53753090 None:intergenic 25.0%
! ATTACTGAGATAGTTTACAA+AGG - chr3.3:53752196-53752215 MS.gene008580:intron 25.0%
! CAATTGGAAGAATAATTATG+AGG - chr3.3:53751533-53751552 MS.gene008580:intron 25.0%
! CCTCAAAAAGATTTATATTG+TGG - chr3.3:53752569-53752588 MS.gene008580:intron 25.0%
! CGTGTTAATAATATTCTTAG+AGG - chr3.3:53754385-53754404 MS.gene008580:CDS 25.0%
! GATACAATTGGAGAAAATAT+GGG - chr3.3:53752071-53752090 MS.gene008580:intron 25.0%
! TAATAAAGTGATCACATTCA+TGG + chr3.3:53752609-53752628 None:intergenic 25.0%
! TATATTGTACTCCACATTTA+AGG + chr3.3:53753084-53753103 None:intergenic 25.0%
! TCATTTCCAAAATGATTTGA+AGG + chr3.3:53752307-53752326 None:intergenic 25.0%
! TTCATTATTAGCAAATGATC+CGG + chr3.3:53751508-53751527 None:intergenic 25.0%
!! AAATGAAACTCAAATGGATT+TGG - chr3.3:53752321-53752340 MS.gene008580:intron 25.0%
!! CCACAATATAAATCTTTTTG+AGG + chr3.3:53752572-53752591 None:intergenic 25.0%
!! TACCATTATAGATCATGTTT+TGG - chr3.3:53753807-53753826 MS.gene008580:intron 25.0%
!! TTTAAAGTCACATATATGTG+TGG - chr3.3:53751322-53751341 MS.gene008580:intron 25.0%
!! TTTTCTTTGTTGGACAATTA+GGG + chr3.3:53752150-53752169 None:intergenic 25.0%
!! TTTTTCTTTGTTGGACAATT+AGG + chr3.3:53752151-53752170 None:intergenic 25.0%
!!! AGAGTGTTTTTTAATTACCT+TGG + chr3.3:53752848-53752867 None:intergenic 25.0%
!!! AGTAAAAACTCACCATTTTT+TGG + chr3.3:53752455-53752474 None:intergenic 25.0%
!!! TTTTGGAAATGAAACTCAAA+TGG - chr3.3:53752315-53752334 MS.gene008580:intron 25.0%
AAACTTTCATGTATACCAAC+AGG - chr3.3:53751901-53751920 MS.gene008580:intron 30.0%
AACTTTCATGTATACCAACA+GGG - chr3.3:53751902-53751921 MS.gene008580:intron 30.0%
AATGAGATGATGCAGAATAA+TGG - chr3.3:53754325-53754344 MS.gene008580:CDS 30.0%
AATTGTATATGGTTGCCTTT+AGG + chr3.3:53753682-53753701 None:intergenic 30.0%
ACAAAGAAAAAAGTTGAGAG+GGG - chr3.3:53752160-53752179 MS.gene008580:intron 30.0%
ACTGTACATACCAAACAAAA+AGG - chr3.3:53753220-53753239 MS.gene008580:CDS 30.0%
AGAATAGAAGGTGAAAATGA+GGG - chr3.3:53752686-53752705 MS.gene008580:intron 30.0%
ATGAACCTGATTCCAAAAAA+TGG - chr3.3:53752440-53752459 MS.gene008580:CDS 30.0%
ATTTCTAATGCATGATGCAT+GGG - chr3.3:53753936-53753955 MS.gene008580:intron 30.0%
CAACAAAGAAAAAAGTTGAG+AGG - chr3.3:53752158-53752177 MS.gene008580:intron 30.0%
CACATTTAAGGAGTTAATTG+AGG + chr3.3:53753072-53753091 None:intergenic 30.0%
CTAATAATGAAGGCTTCAAT+TGG - chr3.3:53751517-53751536 MS.gene008580:intron 30.0%
CTCAATTAACTCCTTAAATG+TGG - chr3.3:53753070-53753089 MS.gene008580:CDS 30.0%
GAATAATTATGAGGAAAAGC+AGG - chr3.3:53751542-53751561 MS.gene008580:intron 30.0%
GACATTGATATTCTAGATGA+TGG - chr3.3:53752773-53752792 MS.gene008580:intron 30.0%
GGACATGATTTAATAGTCAA+AGG + chr3.3:53752882-53752901 None:intergenic 30.0%
GGATACAATTGGAGAAAATA+TGG - chr3.3:53752070-53752089 MS.gene008580:intron 30.0%
GGTATAGAAAAGTAAGAAGA+AGG + chr3.3:53750978-53750997 None:intergenic 30.0%
GTCCAAAACATGATCTATAA+TGG + chr3.3:53753812-53753831 None:intergenic 30.0%
TAATATTGCAGGAGAATAGA+AGG - chr3.3:53752674-53752693 MS.gene008580:intron 30.0%
TTGGGACCGAAAATTATAAA+GGG - chr3.3:53753443-53753462 MS.gene008580:intron 30.0%
TTGTTCATAGTTGTTTGCAT+TGG + chr3.3:53754241-53754260 None:intergenic 30.0%
TTTCCAAAATGATTTGAAGG+AGG + chr3.3:53752304-53752323 None:intergenic 30.0%
TTTGTCTATGTGATTCTAGT+TGG - chr3.3:53751426-53751445 MS.gene008580:intron 30.0%
! ACATTCATGGATTTGAAATG+TGG + chr3.3:53752596-53752615 None:intergenic 30.0%
! ATGTGATGTCTAAGACTAAA+GGG - chr3.3:53753988-53754007 MS.gene008580:intron 30.0%
! CAAAAAGTCTTGAGAGTTTT+TGG + chr3.3:53753873-53753892 None:intergenic 30.0%
! CGAGTCTTGTGAATTTAAAT+TGG + chr3.3:53751671-53751690 None:intergenic 30.0%
! GGAGATCCCTTTATAATTTT+CGG + chr3.3:53753452-53753471 None:intergenic 30.0%
! GGATCATTTGCTAATAATGA+AGG - chr3.3:53751507-53751526 MS.gene008580:intron 30.0%
! TGAAACATTGTTGTTGTTGA+TGG + chr3.3:53754284-53754303 None:intergenic 30.0%
!! ACTGCTTTTATGCTAATAGT+AGG - chr3.3:53753032-53753051 MS.gene008580:CDS 30.0%
!! TGGTTGTGATTTGTTTAAAG+TGG - chr3.3:53751342-53751361 MS.gene008580:intron 30.0%
!!! AACTGATTTGCCTTTTTGTT+TGG + chr3.3:53753233-53753252 None:intergenic 30.0%
!!! ACAAAACTAGGTATTTTGGT+AGG - chr3.3:53753651-53753670 MS.gene008580:CDS 30.0%
!!! CTCTCAACTTTTTTCTTTGT+TGG + chr3.3:53752160-53752179 None:intergenic 30.0%
!!! GAGACGAAATTCATGTTTTT+TGG - chr3.3:53751806-53751825 MS.gene008580:intron 30.0%
!!! TGACTCCTTTTTTTATGCTT+TGG - chr3.3:53752972-53752991 MS.gene008580:CDS 30.0%
AAAAGTGAGTCATCTTCTAC+AGG + chr3.3:53754427-53754446 None:intergenic 35.0%
ACTACTGTGTTCATATGCAT+TGG - chr3.3:53753307-53753326 MS.gene008580:CDS 35.0%
AGTTGGAAATAGAACAGTGA+GGG - chr3.3:53752721-53752740 MS.gene008580:intron 35.0%
ATATGGGCAGAAAGTAGTAA+AGG - chr3.3:53752811-53752830 MS.gene008580:CDS 35.0%
ATCGATATCGATGAATTCTC+CGG + chr3.3:53752355-53752374 None:intergenic 35.0%
CACGTGATTGGTAAAGTATA+GGG + chr3.3:53753837-53753856 None:intergenic 35.0%
CATCATCTGATCTTCTACTT+AGG + chr3.3:53752051-53752070 None:intergenic 35.0%
CATTTCTAATGCATGATGCA+TGG - chr3.3:53753935-53753954 MS.gene008580:intron 35.0%
CTAAGTAGAAGATCAGATGA+TGG - chr3.3:53752049-53752068 MS.gene008580:intron 35.0%
CTTGGGACCGAAAATTATAA+AGG - chr3.3:53753442-53753461 MS.gene008580:intron 35.0%
GAAAATGAGGGGATATCATT+AGG - chr3.3:53752698-53752717 MS.gene008580:intron 35.0%
GAAGGAGAAATTTGATGAGA+TGG + chr3.3:53751592-53751611 None:intergenic 35.0%
GAATAGAAGGTGAAAATGAG+GGG - chr3.3:53752687-53752706 MS.gene008580:intron 35.0%
GACTTACATGAGAAGAGTTA+AGG + chr3.3:53751043-53751062 None:intergenic 35.0%
GAGAATAGAAGGTGAAAATG+AGG - chr3.3:53752685-53752704 MS.gene008580:intron 35.0%
GAGAATTCATCGATATCGAT+CGG - chr3.3:53752355-53752374 MS.gene008580:intron 35.0%
GATACAGATGGAGGAAATAT+GGG - chr3.3:53752795-53752814 MS.gene008580:intron 35.0%
GCATCATGCATTAGAAATGT+GGG + chr3.3:53753934-53753953 None:intergenic 35.0%
GTGCATTTGTAATAGCTTCT+TGG + chr3.3:53752124-53752143 None:intergenic 35.0%
GTTGTTTGAACAACAACTCT+TGG + chr3.3:53752749-53752768 None:intergenic 35.0%
TAAAGGGAAATCCAAATCCA+AGG - chr3.3:53752828-53752847 MS.gene008580:CDS 35.0%
TAAGAAGAAGGAGAAAAGAG+AGG + chr3.3:53750966-53750985 None:intergenic 35.0%
TATGGGCAAAAACAAGTGAA+AGG - chr3.3:53752088-53752107 MS.gene008580:intron 35.0%
TATGGGCAGAAAGTAGTAAA+GGG - chr3.3:53752812-53752831 MS.gene008580:CDS 35.0%
TCACTAGTAGAATTACTCTC+TGG + chr3.3:53751977-53751996 None:intergenic 35.0%
TGCATCATGCATTAGAAATG+TGG + chr3.3:53753935-53753954 None:intergenic 35.0%
! ATAGTTGTTTGCATTGGTAG+TGG + chr3.3:53754235-53754254 None:intergenic 35.0%
! ATCTCATCATCAAGTGTTGT+CGG - chr3.3:53750869-53750888 MS.gene008580:CDS 35.0%
! CATGTGATGTCTAAGACTAA+AGG - chr3.3:53753987-53754006 MS.gene008580:intron 35.0%
! GTTACATACATTTTGAACCG+TGG + chr3.3:53751649-53751668 None:intergenic 35.0%
! GTTGTTGTTGATGGAATTGT+TGG + chr3.3:53754275-53754294 None:intergenic 35.0%
! TTTTGGTAGGTCAAACCTAA+AGG - chr3.3:53753664-53753683 MS.gene008580:CDS 35.0%
!! CACTTGATGATGAGATCTTT+CGG + chr3.3:53750865-53750884 None:intergenic 35.0%
!! CTTTAGTCTTAGACATCACA+TGG + chr3.3:53753989-53754008 None:intergenic 35.0%
!! GATCAGATGATGGATACAAT+TGG - chr3.3:53752059-53752078 MS.gene008580:intron 35.0%
!! GATGCAGAATAATGGATTCA+CGG - chr3.3:53754333-53754352 MS.gene008580:CDS 35.0%
!! TCTTACTTTTCTATACCTCC+TGG - chr3.3:53750981-53751000 MS.gene008580:CDS 35.0%
!! TTCTAGATGATGGATACAGA+TGG - chr3.3:53752783-53752802 MS.gene008580:intron 35.0%
!!! ACTCACCATTTTTTGGAATC+AGG + chr3.3:53752448-53752467 None:intergenic 35.0%
!!! TTTCGGTGTCTTTAAGGTTT+TGG + chr3.3:53750848-53750867 None:intergenic 35.0%
!!! TTTTTTACATTGGCCCAAGT+CGG - chr3.3:53753511-53753530 MS.gene008580:intron 35.0%
AATTATGTTGCAGCGAACCT+TGG - chr3.3:53753265-53753284 MS.gene008580:CDS 40.0%
ACGTTGTTATCACTGCTCTT+AGG + chr3.3:53754147-53754166 None:intergenic 40.0%
AGGTGTAGACTTGAATTTGG+GGG + chr3.3:53750916-53750935 None:intergenic 40.0%
ATTATGTTGCAGCGAACCTT+GGG - chr3.3:53753266-53753285 MS.gene008580:CDS 40.0%
ATTCTTCCATCTCCAACTAC+CGG - chr3.3:53751486-53751505 MS.gene008580:intron 40.0%
CAGACTTCTCATAAATCTGG+AGG - chr3.3:53752394-53752413 MS.gene008580:intron 40.0%
CCAAAATGATTTGAAGGAGG+AGG + chr3.3:53752301-53752320 None:intergenic 40.0%
CGCTGCAACATAATTCTAAG+AGG + chr3.3:53753260-53753279 None:intergenic 40.0%
CTAATTCGATTGCACGTGAT+TGG + chr3.3:53753849-53753868 None:intergenic 40.0%
CTAATTTACGTTGAGTCCCA+AGG + chr3.3:53753285-53753304 None:intergenic 40.0%
CTACTTAGGATCTGAACTTG+TGG + chr3.3:53752037-53752056 None:intergenic 40.0%
GAAAAAAGTTGAGAGGGGTT+TGG - chr3.3:53752165-53752184 MS.gene008580:intron 40.0%
GAGCAGACTTCTCATAAATC+TGG - chr3.3:53752391-53752410 MS.gene008580:intron 40.0%
GAGGTGTAGACTTGAATTTG+GGG + chr3.3:53750917-53750936 None:intergenic 40.0%
GAGTTGGAAATAGAACAGTG+AGG - chr3.3:53752720-53752739 MS.gene008580:intron 40.0%
GCACGTGATTGGTAAAGTAT+AGG + chr3.3:53753838-53753857 None:intergenic 40.0%
GCAGTGATAACAACGTATGA+AGG - chr3.3:53754151-53754170 MS.gene008580:intron 40.0%
GGAGTCAAAGAACTCTATGA+TGG + chr3.3:53752959-53752978 None:intergenic 40.0%
GGATACAGATGGAGGAAATA+TGG - chr3.3:53752794-53752813 MS.gene008580:intron 40.0%
GTAGGAGAAATAGGAAGAGA+TGG + chr3.3:53750942-53750961 None:intergenic 40.0%
GTGATTGGTAAAGTATAGGG+TGG + chr3.3:53753834-53753853 None:intergenic 40.0%
TCATAATCATCCTAAGCCTG+TGG - chr3.3:53752222-53752241 MS.gene008580:intron 40.0%
TGAGAAGAGTTAAGGAGAAC+AGG + chr3.3:53751035-53751054 None:intergenic 40.0%
TTAGCAAATGATCCGGTAGT+TGG + chr3.3:53751501-53751520 None:intergenic 40.0%
TTCATGTATACCAACAGGGA+TGG - chr3.3:53751906-53751925 MS.gene008580:intron 40.0%
TTTGGTCGGTTGGAGAATTA+AGG + chr3.3:53750830-53750849 None:intergenic 40.0%
! AAGAGAGGTGTAGGAGAAAT+AGG + chr3.3:53750951-53750970 None:intergenic 40.0%
! AAGTGTTGTCGGATCAAAAC+AGG - chr3.3:53750880-53750899 MS.gene008580:CDS 40.0%
! AATGGATTTGGTTGCTACAC+CGG - chr3.3:53752333-53752352 MS.gene008580:intron 40.0%
! ACATACATTTTGAACCGTGG+TGG + chr3.3:53751646-53751665 None:intergenic 40.0%
! AGGAGGTGTAGACTTGAATT+TGG + chr3.3:53750919-53750938 None:intergenic 40.0%
! CCTCCTCCTTCAAATCATTT+TGG - chr3.3:53752298-53752317 MS.gene008580:intron 40.0%
! GGAGGTGTAGACTTGAATTT+GGG + chr3.3:53750918-53750937 None:intergenic 40.0%
! TTTTTACATTGGCCCAAGTC+GGG - chr3.3:53753512-53753531 MS.gene008580:intron 40.0%
!! GAGATCTTTCGGTGTCTTTA+AGG + chr3.3:53750854-53750873 None:intergenic 40.0%
!! GTAGTGGTTTGTTGATAGAG+TGG + chr3.3:53754219-53754238 None:intergenic 40.0%
!! TAGATGATGGATACAGATGG+AGG - chr3.3:53752786-53752805 MS.gene008580:intron 40.0%
!!! GGTGTCTTTAAGGTTTTGGT+CGG + chr3.3:53750844-53750863 None:intergenic 40.0%
!!! TCTTTAAGGTTTTGGTCGGT+TGG + chr3.3:53750840-53750859 None:intergenic 40.0%
AAAGTTGAGAGGGGTTTGGA+TGG - chr3.3:53752169-53752188 MS.gene008580:intron 45.0%
AAGGAGGTCAGAGAAGAAAG+AGG + chr3.3:53750811-53750830 None:intergenic 45.0%
AATGATCCGGTAGTTGGAGA+TGG + chr3.3:53751495-53751514 None:intergenic 45.0%
AGCTCAGAAAGAGAAAAGCC+AGG + chr3.3:53751002-53751021 None:intergenic 45.0%
ATACCAACAGGGATGGAACA+TGG - chr3.3:53751913-53751932 MS.gene008580:intron 45.0%
ATCTTCTACAGGCTCCTCTT+TGG + chr3.3:53754416-53754435 None:intergenic 45.0%
GAAATAGGAAGAGATGGAGG+AGG + chr3.3:53750936-53750955 None:intergenic 45.0%
GAGGGGATATCATTAGGAGT+TGG - chr3.3:53752704-53752723 MS.gene008580:intron 45.0%
GATGGAATTGTTGGCACTTG+TGG + chr3.3:53754266-53754285 None:intergenic 45.0%
GGAAAAGCAGGAGAATGTCA+AGG - chr3.3:53751554-53751573 MS.gene008580:intron 45.0%
GGAGAAATAGGAAGAGATGG+AGG + chr3.3:53750939-53750958 None:intergenic 45.0%
GGTGTAGACTTGAATTTGGG+GGG + chr3.3:53750915-53750934 None:intergenic 45.0%
GTCGAAGATTGAAACCCAAC+TGG + chr3.3:53751624-53751643 None:intergenic 45.0%
GTTGTCGGATCAAAACAGGT+CGG - chr3.3:53750884-53750903 MS.gene008580:CDS 45.0%
GTTTCAATCTTCGACCACCA+CGG - chr3.3:53751629-53751648 MS.gene008580:intron 45.0%
TACTACAAGTGCACAAACCC+AGG - chr3.3:53754082-53754101 MS.gene008580:intron 45.0%
TCAGAAAGAGAAAAGCCAGG+AGG + chr3.3:53750999-53751018 None:intergenic 45.0%
TCTTAGAGGTAGAGCCAAAG+AGG - chr3.3:53754399-53754418 MS.gene008580:CDS 45.0%
TTGTCGGATCAAAACAGGTC+GGG - chr3.3:53750885-53750904 MS.gene008580:CDS 45.0%
! CGTTCGACATGTTTTCTCAC+TGG + chr3.3:53754112-53754131 None:intergenic 45.0%
! GAAGGAGAAAAGAGAGGTGT+AGG + chr3.3:53750960-53750979 None:intergenic 45.0%
! GTTTTCTCACTGGACATCCT+GGG + chr3.3:53754102-53754121 None:intergenic 45.0%
! TGTTTTCTCACTGGACATCC+TGG + chr3.3:53754103-53754122 None:intergenic 45.0%
!! GCAGAATAATGGATTCACGG+TGG - chr3.3:53754336-53754355 MS.gene008580:CDS 45.0%
AAATTTGTCCGGTCCCGACT+TGG + chr3.3:53753528-53753547 None:intergenic 50.0%
AATTTGTCCGGTCCCGACTT+GGG + chr3.3:53753527-53753546 None:intergenic 50.0%
ATTTGCAAGTGACGACGACG+AGG + chr3.3:53752278-53752297 None:intergenic 50.0%
CCTTCCAAGCTCAACCAGTT+GGG - chr3.3:53751607-53751626 MS.gene008580:intron 50.0%
CTAAGCCTGTGGCTAACAAG+AGG - chr3.3:53752233-53752252 MS.gene008580:intron 50.0%
CTCTTGTTAGCCACAGGCTT+AGG + chr3.3:53752235-53752254 None:intergenic 50.0%
GAAACCCAACTGGTTGAGCT+TGG + chr3.3:53751614-53751633 None:intergenic 50.0%
GAGGTCAGAGAAGAAAGAGG+AGG + chr3.3:53750808-53750827 None:intergenic 50.0%
GGAGAATGTCAAGGCTGAAG+AGG - chr3.3:53751563-53751582 MS.gene008580:intron 50.0%
GGTCGGTTGGAGAATTAAGG+AGG + chr3.3:53750827-53750846 None:intergenic 50.0%
GTGTTCCTCTTGTTAGCCAC+AGG + chr3.3:53752241-53752260 None:intergenic 50.0%
TCACCATGTTCCATCCCTGT+TGG + chr3.3:53751919-53751938 None:intergenic 50.0%
TCCTTCCAAGCTCAACCAGT+TGG - chr3.3:53751606-53751625 MS.gene008580:intron 50.0%
! CACTGCTCTTAGGTCTTGTG+AGG + chr3.3:53754137-53754156 None:intergenic 50.0%
CATGATGTTCCTGCACCACG+TGG - chr3.3:53754184-53754203 MS.gene008580:intron 55.0%
CCCAACTGGTTGAGCTTGGA+AGG + chr3.3:53751610-53751629 None:intergenic 55.0%
GAGTGGTTTCCACTTCCACG+TGG + chr3.3:53754202-53754221 None:intergenic 55.0%
TTTCCACTTCCACGTGGTGC+AGG + chr3.3:53754196-53754215 None:intergenic 55.0%
ACATTGGCCCAAGTCGGGAC+CGG - chr3.3:53753517-53753536 MS.gene008580:intron 60.0%
GTTCCTGCACCACGTGGAAG+TGG - chr3.3:53754190-53754209 MS.gene008580:intron 60.0%


Chromosome Type Strat End Strand Name
chr3.3 gene 53750801 53754465 53750801 ID=MS.gene008580
chr3.3 mRNA 53750801 53754465 53750801 ID=MS.gene008580.t1;Parent=MS.gene008580
chr3.3 exon 53754211 53754465 53754211 ID=MS.gene008580.t1.exon1;Parent=MS.gene008580.t1
chr3.3 CDS 53754211 53754465 53754211 ID=cds.MS.gene008580.t1;Parent=MS.gene008580.t1
chr3.3 exon 53753607 53753780 53753607 ID=MS.gene008580.t1.exon2;Parent=MS.gene008580.t1
chr3.3 CDS 53753607 53753780 53753607 ID=cds.MS.gene008580.t1;Parent=MS.gene008580.t1
chr3.3 exon 53752805 53753343 53752805 ID=MS.gene008580.t1.exon3;Parent=MS.gene008580.t1
chr3.3 CDS 53752805 53753343 53752805 ID=cds.MS.gene008580.t1;Parent=MS.gene008580.t1
chr3.3 exon 53752417 53752581 53752417 ID=MS.gene008580.t1.exon4;Parent=MS.gene008580.t1
chr3.3 CDS 53752417 53752581 53752417 ID=cds.MS.gene008580.t1;Parent=MS.gene008580.t1
chr3.3 exon 53750801 53751188 53750801 ID=MS.gene008580.t1.exon5;Parent=MS.gene008580.t1
chr3.3 CDS 53750801 53751188 53750801 ID=cds.MS.gene008580.t1;Parent=MS.gene008580.t1
Gene Sequence

>MS.gene008580

ATGACCTCCTCTTTCTTCTCTGACCTCCTTAATTCTCCAACCGACCAAAACCTTAAAGACACCGAAAGATCTCATCATCAAGTGTTGTCGGATCAAAACAGGTCGGGTTTACCCCCCAAATTCAAGTCTACACCTCCTCCATCTCTTCCTATTTCTCCTACACCTCTCTTTTCTCCTTCTTCTTACTTTTCTATACCTCCTGGCTTTTCTCTTTCTGAGCTTCTTGACTCTCCTGTTCTCCTTAACTCTTCTCATGTAAGTCTCATAACAAATTCAACTTCTTGTTACAAAAATTATTCATCAAATCACCAAATTGATCACCTTAATTATACTTTATAGTTGACTTCATAATTCTCACTATCTTTTGTATTAATTATTGTTTTTGTGATTGTTGTTTGTTGAGTATATGAGATACTTTGTGTTGTTTTGCCATATCGATTTAATTCTTGTATATGGTTGGTGTAAATATTTTTTTACACCTAAAAATGAATCATAATTGTTAGATCATTATATCATATTTTTTTAAAGTCACATATATGTGTGGTTGTGATTTGTTTAAAGTGGAAATAAAATTGATAGAAACCATATATGAAAATCAAACTCATATTATATACTCTTTTTTATATTTGTCTATGTGATTCTAGTTGGTTGCATATATATAATATAAATTTTTTTTTTAATTCAGATTCTTCCATCTCCAACTACCGGATCATTTGCTAATAATGAAGGCTTCAATTGGAAGAATAATTATGAGGAAAAGCAGGAGAATGTCAAGGCTGAAGAGGAAACCATCTCATCAAATTTCTCCTTCCAAGCTCAACCAGTTGGGTTTCAATCTTCGACCACCACGGTTCAAAATGTATGTAACCAATTTAAATTCACAAGACTCGTTTATAACACTTGTGCATATAGTAAAAAAATACTCGAATTACTGACAAAAATTAAAGACGAAAAAAAGTAATTAATCTCTAATTCTTACATCTTTAGCACTTAACGATTGAATTAGAGACGAAATTCATGTTTTTTGGTCGTCATAGCTATATGTATTTTTCTCTTACTTTGGTTAAACAGTTTAAATTCAATTCTTTGACATATGTTTCAAACTTTCATGTATACCAACAGGGATGGAACATGGTGAAAACAGAAAATGCTTCTTCAATGCAAACTTTCACACCAGAGAGTAATTCTACTAGTGAACAAAATAAATCAAATTACAACAATTATCAATCACAGCCACAAGTTCAGATCCTAAGTAGAAGATCAGATGATGGATACAATTGGAGAAAATATGGGCAAAAACAAGTGAAAGGAAGTGAAAATCCAAGAAGCTATTACAAATGCACTTACCCTAATTGTCCAACAAAGAAAAAAGTTGAGAGGGGTTTGGATGGACAAATTACTGAGATAGTTTACAAAGGTAGTCATAATCATCCTAAGCCTGTGGCTAACAAGAGGAACACAAACTCGTTGTCTTCCTCGTCGTCGTCACTTGCAAATCCTCCTCCTTCAAATCATTTTGGAAATGAAACTCAAATGGATTTGGTTGCTACACCGGAGAATTCATCGATATCGATCGGAGATGATGATTTTGAGCAGACTTCTCATAAATCTGGAGGAGATCATGATCAGTTTTGTGAAGATGAACCTGATTCCAAAAAATGGTGAGTTTTTACTCTCTCTTTTTAGTAAAAAATTTAGTGTGACACTTATATCATTTTATCATATCACATAAAATGGAAACTTTAATTGTAATACTTTGTTGCACATACCTCAAAAAGATTTATATTGTGGACCACATTTCAAATCCATGAATGTGATCACTTTATTATATATAGTTACATTTTATTTCATAATCATTTTGAATTAATTTTATTAATATTGCAGGAGAATAGAAGGTGAAAATGAGGGGATATCATTAGGAGTTGGAAATAGAACAGTGAGGGAACCAAGAGTTGTTGTTCAAACAACAAGTGACATTGATATTCTAGATGATGGATACAGATGGAGGAAATATGGGCAGAAAGTAGTAAAGGGAAATCCAAATCCAAGGTAATTAAAAAACACTCTTTTGATATTTTCCTTTGACTATTAAATCATGTCCAACTTTTTAAAAGTTGTTGTTCTTTTTACTTTTAAGAATTTTAGTATGAGAATTCCATCATAGAGTTCTTTGACTCCTTTTTTTATGCTTTGGAAGTTTGAGATAATGCTACTGCTAATACTCACAAAAAACTGCTTTTATGCTAATAGTAGGCAATTATATGACGCCCTCAATTAACTCCTTAAATGTGGAGTACAATATACAGTAGAAACTCTATAAATTAATAATGTCATGACCAGAGAAATTTATTAATTTAGAGAGTTATTAATTTATCGATAAATTAATAATTATTAATTTAAAGAGTTTTTAAGTAATTATACTGTACATACCAAACAAAAAGGCAAATCAGTTTATGCCTCTTAGAATTATGTTGCAGCGAACCTTGGGACTCAACGTAAATTAGTAACTACTGTGTTCATATGCATTGGAAATCAATAATGACTTTTGAACTTTAAAGGAAAACAGACAACTATTGAATCATATTTCAATAGAGTGTAATATATTTTTTTCAGTTTCTATGAATTATTAATTTATGATTTTCTTGGGACCGAAAATTATAAAGGGATCTCCTGAAAAATTATTATCTTATTATTTTATCGAGTTTTTCAATTTTTTACATTGGCCCAAGTCGGGACCGGACAAATTTATTATTTTAGAGAGTTTATTAATTTACCGAGTATTAATTTAAAGAGTTTCTACTTTAACTAAATACATTTATTATAATTTTTTCCTAAAGATACACAAAATTAACAAAACTAGGTATTTTGGTAGGTCAAACCTAAAGGCAACCATATACAATTTTTTTCAAGAATTCATACAAAAAATGTACACATTAAATACATGATCTATTTATTTTAATATATGCAAAAATTTCAAAGTGAATTTATGAAAAGCAACGTACAATGTACCATTATAGATCATGTTTTGGACCACCCTATACTTTACCAATCACGTGCAATCGAATTAGACCAAAAACTCTCAAGACTTTTTGCACAATGTCTAAATATTCTTATTGGTCAAATTTGGCAACCCACATTTCTAATGCATGATGCATGGGATGAGAATGAGACTCAAATATTCTATTCCATGTGATGTCTAAGACTAAAGGGTTTTCCACTAGTTTTATTTTACTCATTTTGTGTAATTAATTATTTTTGTTTACTAAACATAATATAGGAGTTACTACAAGTGCACAAACCCAGGATGTCCAGTGAGAAAACATGTCGAACGAGCCTCACAAGACCTAAGAGCAGTGATAACAACGTATGAAGGAAAACACAATCATGATGTTCCTGCACCACGTGGAAGTGGAAACCACTCTATCAACAAACCACTACCAATGCAAACAACTATGAACAATACCACAAGTGCCAACAATTCCATCAACAACAACAATGTTTCACTTCATAATGGATTCTTCAACAATGAGATGATGCAGAATAATGGATTCACGGTGGATTCTTACATGAATATGAATCAACAACGTGTTAATAATATTCTTAGAGGTAGAGCCAAAGAGGAGCCTGTAGAAGATGACTCACTTTTTGAATCTTTCCTATCTTGA
Protein sequence

>MS.gene008580.t1

MTSSFFSDLLNSPTDQNLKDTERSHHQVLSDQNRSGLPPKFKSTPPPSLPISPTPLFSPSSYFSIPPGFSLSELLDSPVLLNSSHILPSPTTGSFANNEGFNWKNNYEEKQENVKAEEETISSNFSFQAQPVGFQSSTTTVQNGWNMVKTENASSMQTFTPESNSTSEQNKSNYNNYQSQPQVQILSRRSDDGYNWRKYGQKQVKGSENPRSYYKCTYPNCPTKKKVERGLDGQITEIVYKGSHNHPKPVANKRNTNSLSSSSSSLANPPPSNHFGNETQMDLVATPENSSISIGDDDFEQTSHKSGGDHDQFCEDEPDSKKWRIEGENEGISLGVGNRTVREPRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTNPGCPVRKHVERASQDLRAVITTYEGKHNHDVPAPRGSGNHSINKPLPMQTTMNNTTSANNSINNNNVSLHNGFFNNEMMQNNGFTVDSYMNMNQQRVNNILRGRAKEEPVEDDSLFESFLS