AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene008814

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene008814.t1 MTR_8g069935 72.948 329 58 3 1 324 161 463 1.40e-148 426
MS.gene008814.t1 MTR_8g067635 46.240 359 155 5 2 323 178 535 3.20e-87 271
MS.gene008814.t1 MTR_8g067650 50.173 289 118 4 59 323 233 519 1.26e-86 270
MS.gene008814.t1 MTR_2g024380 42.773 339 103 5 47 324 162 470 1.25e-75 239
MS.gene008814.t1 MTR_6g053200 44.759 353 130 7 22 324 199 536 3.34e-72 233
MS.gene008814.t1 MTR_2g024350 44.053 227 66 2 159 324 1 227 1.25e-54 178
MS.gene008814.t1 MTR_7g105000 51.064 141 66 2 46 186 203 340 2.85e-37 137
MS.gene008814.t1 MTR_7g104980 58.000 100 42 0 187 286 18 117 1.35e-30 115
MS.gene008814.t1 MTR_1g099600 53.535 99 44 2 143 241 163 259 9.85e-30 115
MS.gene008814.t1 MTR_8g028565 46.939 98 49 2 143 240 134 228 1.35e-24 102
MS.gene008814.t1 MTR_7g079040 47.917 96 49 1 145 240 133 227 1.43e-24 102
MS.gene008814.t1 MTR_2g032030 45.133 113 50 3 146 248 238 348 1.54e-22 97.8
MS.gene008814.t1 MTR_2g032030 45.133 113 50 3 146 248 238 348 4.07e-22 97.1
MS.gene008814.t1 MTR_8g098945 56.944 72 30 1 167 238 130 200 1.47e-21 92.8
MS.gene008814.t1 MTR_4g094908 51.471 68 33 0 167 234 267 334 1.12e-19 88.6
MS.gene008814.t1 MTR_5g016610 51.471 68 33 0 167 234 200 267 2.09e-19 86.7
MS.gene008814.t1 MTR_8g087000 31.013 158 84 3 164 308 75 220 2.23e-19 85.9
MS.gene008814.t1 MTR_8g087000 31.013 158 84 3 164 308 74 219 2.45e-19 85.9
MS.gene008814.t1 MTR_4g127040 52.055 73 34 1 162 234 242 313 3.60e-19 86.7
MS.gene008814.t1 MTR_2g083870 56.061 66 29 0 161 226 75 140 5.78e-19 85.1
MS.gene008814.t1 MTR_3g108960 43.158 95 53 1 138 231 285 379 1.63e-18 85.9
MS.gene008814.t1 MTR_7g109600 46.835 79 42 0 167 245 54 132 2.82e-18 83.6
MS.gene008814.t1 MTR_1g070455 57.627 59 25 0 167 225 294 352 4.73e-18 84.0
MS.gene008814.t1 MTR_2g016770 53.968 63 29 0 164 226 25 87 5.15e-18 81.6
MS.gene008814.t1 MTR_2g016770 53.968 63 29 0 164 226 33 95 6.08e-18 81.6
MS.gene008814.t1 MTR_1g009613 47.826 69 36 0 167 235 263 331 1.56e-17 82.4
MS.gene008814.t1 MTR_0117s0040 54.098 61 28 0 167 227 75 135 2.23e-16 77.8
MS.gene008814.t1 MTR_7g011820 43.373 83 45 2 166 248 410 490 1.08e-15 78.2
MS.gene008814.t1 MTR_7g011820 49.275 69 33 2 162 230 224 290 1.91e-15 77.4
MS.gene008814.t1 MTR_7g100510 42.574 101 43 4 143 229 324 423 1.74e-15 77.0
MS.gene008814.t1 MTR_7g100510 55.385 65 27 2 162 226 185 247 2.74e-15 76.6
MS.gene008814.t1 MTR_3g009470 48.649 74 36 2 164 237 278 349 5.01e-15 76.3
MS.gene008814.t1 MTR_3g009470 43.478 69 38 1 166 234 495 562 1.01e-13 72.4
MS.gene008814.t1 MTR_7g071120 51.220 82 35 3 149 230 152 228 5.18e-15 75.9
MS.gene008814.t1 MTR_7g071120 39.189 74 44 1 166 239 324 396 1.19e-11 65.9
MS.gene008814.t1 MTR_7g080020 39.048 105 49 3 166 270 493 582 6.74e-15 75.9
MS.gene008814.t1 MTR_7g080020 43.902 82 44 2 156 237 270 349 4.87e-14 73.2
MS.gene008814.t1 MTR_4g082580 43.750 80 44 1 166 245 278 356 7.96e-15 75.1
MS.gene008814.t1 MTR_4g082580 41.176 68 39 1 159 226 138 204 5.36e-11 63.5
MS.gene008814.t1 MTR_3g009470 48.649 74 36 2 164 237 278 349 8.88e-15 75.1
MS.gene008814.t1 MTR_5g042920 46.269 67 35 1 166 232 320 385 1.00e-14 74.7
MS.gene008814.t1 MTR_5g042920 35.971 139 75 6 162 297 147 274 3.13e-14 73.6
MS.gene008814.t1 MTR_1g086790 44.286 70 38 1 166 235 158 226 1.27e-14 73.9
MS.gene008814.t1 MTR_7g109800 38.542 96 57 2 139 234 119 212 3.19e-14 72.4
MS.gene008814.t1 MTR_4g130900 45.205 73 38 2 155 226 347 418 5.99e-14 72.8
MS.gene008814.t1 MTR_8g099350 41.379 87 45 2 141 221 103 189 7.53e-14 72.0
MS.gene008814.t1 MTR_4g094588 49.180 61 30 1 166 226 178 237 1.13e-13 71.2
MS.gene008814.t1 MTR_5g091390 50.000 62 30 1 166 227 157 217 1.45e-13 70.5
MS.gene008814.t1 MTR_4g013260 52.174 69 31 2 159 226 176 243 1.50e-13 71.6
MS.gene008814.t1 MTR_4g013260 44.262 61 33 1 166 226 336 395 1.91e-12 68.2
MS.gene008814.t1 MTR_7g080000 47.619 63 32 1 166 228 432 493 2.15e-13 71.2
MS.gene008814.t1 MTR_7g080000 39.024 82 48 2 156 237 224 303 9.82e-12 66.2
MS.gene008814.t1 MTR_3g031220 50.000 66 31 2 165 230 197 260 3.28e-13 70.5
MS.gene008814.t1 MTR_3g031220 43.548 62 34 1 166 227 365 425 2.21e-11 65.1
MS.gene008814.t1 MTR_3g056100 41.791 67 38 1 166 232 402 467 3.65e-13 70.5
MS.gene008814.t1 MTR_3g056100 48.529 68 33 2 159 226 236 301 8.83e-13 69.3
MS.gene008814.t1 MTR_3g031220 50.000 66 31 2 165 230 197 260 3.65e-13 70.1
MS.gene008814.t1 MTR_3g056100 41.791 67 38 1 166 232 415 480 3.73e-13 70.5
MS.gene008814.t1 MTR_3g056100 48.529 68 33 2 159 226 236 301 9.19e-13 69.3
MS.gene008814.t1 MTR_5g094430 41.791 67 38 1 166 232 364 429 4.25e-13 70.1
MS.gene008814.t1 MTR_5g094430 48.438 64 31 2 163 226 197 258 3.30e-12 67.4
MS.gene008814.t1 MTR_3g056100 41.791 67 38 1 166 232 258 323 5.01e-13 69.7
MS.gene008814.t1 MTR_3g056100 48.529 68 33 2 159 226 92 157 1.21e-12 68.6
MS.gene008814.t1 MTR_3g056100 41.791 67 38 1 166 232 271 336 5.45e-13 69.7
MS.gene008814.t1 MTR_3g056100 48.529 68 33 2 159 226 92 157 1.29e-12 68.6
MS.gene008814.t1 MTR_2g033820 44.615 65 35 1 166 230 203 266 6.06e-13 69.3
MS.gene008814.t1 MTR_5g094430 41.791 67 38 1 166 232 252 317 6.95e-13 69.3
MS.gene008814.t1 MTR_5g094430 48.438 64 31 2 163 226 85 146 4.41e-12 67.0
MS.gene008814.t1 MTR_5g094430 41.791 67 38 1 166 232 230 295 7.12e-13 69.3
MS.gene008814.t1 MTR_5g094430 48.438 64 31 2 163 226 63 124 4.63e-12 66.6
MS.gene008814.t1 MTR_4g122530 38.571 70 42 1 166 235 208 276 8.00e-13 68.9
MS.gene008814.t1 MTR_5g074400 53.226 62 27 2 165 226 242 301 9.24e-13 69.3
MS.gene008814.t1 MTR_5g074400 44.444 63 34 1 166 228 420 481 1.29e-12 68.9
MS.gene008814.t1 MTR_3g095040 45.161 62 33 1 166 227 118 178 1.43e-12 66.2
MS.gene008814.t1 MTR_3g106060 41.772 79 43 1 166 244 138 213 1.74e-12 67.4
MS.gene008814.t1 MTR_1g077780 44.776 67 36 1 166 232 62 127 2.01e-12 64.3
MS.gene008814.t1 MTR_2g045360 41.667 60 35 0 167 226 212 271 2.12e-12 67.8
MS.gene008814.t1 MTR_5g043880 40.230 87 50 2 137 223 96 180 2.22e-12 66.6
MS.gene008814.t1 MTR_8g092010 43.939 66 36 1 161 226 103 167 2.40e-12 65.1
MS.gene008814.t1 MTR_5g067680 48.333 60 29 1 164 221 200 259 3.30e-12 67.0
MS.gene008814.t1 MTR_4g007060 41.026 78 45 1 166 242 128 205 3.52e-12 66.2
MS.gene008814.t1 MTR_4g052030 54.545 55 13 1 169 223 8 50 4.23e-12 60.8
MS.gene008814.t1 MTR_7g062220 49.153 59 29 1 165 223 123 180 4.49e-12 66.2
MS.gene008814.t1 MTR_4g007060 41.026 78 45 1 166 242 162 239 4.49e-12 66.2
MS.gene008814.t1 MTR_3g090860 37.209 86 45 3 144 221 106 190 6.93e-12 65.9
MS.gene008814.t1 MTR_3g053330 33.708 89 47 1 138 226 235 311 7.94e-12 66.2
MS.gene008814.t1 MTR_2g105060 36.190 105 58 1 166 261 94 198 9.68e-12 64.3
MS.gene008814.t1 MTR_2g105060 36.190 105 58 1 166 261 169 273 2.22e-11 64.3
MS.gene008814.t1 MTR_5g097490 46.667 60 31 1 167 226 253 311 2.80e-11 64.3
MS.gene008814.t1 MTR_4g132430 30.435 115 65 3 114 226 86 187 3.67e-11 63.9
MS.gene008814.t1 MTR_4g132430 30.435 115 65 3 114 226 220 321 6.02e-11 63.5
MS.gene008814.t1 MTR_1g078260 42.529 87 46 4 155 239 235 319 8.03e-11 63.2
MS.gene008814.t1 MTR_7g110720 40.000 60 36 0 167 226 217 276 9.50e-11 62.8
MS.gene008814.t1 MTR_7g079010 41.935 62 35 1 162 223 137 197 9.76e-11 61.2
MS.gene008814.t1 MTR_7g110720 40.000 60 36 0 167 226 190 249 9.80e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene008814.t1 AT5G52830 53.535 99 44 2 143 241 143 239 4.54e-29 114
MS.gene008814.t1 AT4G01250 37.086 151 84 5 94 242 62 203 1.90e-25 103
MS.gene008814.t1 AT4G23550 44.660 103 56 1 150 252 124 225 6.35e-23 97.1
MS.gene008814.t1 AT5G45050 50.000 90 44 1 146 235 1021 1109 3.48e-22 97.8
MS.gene008814.t1 AT5G45050 50.000 90 44 1 146 235 1160 1248 3.77e-22 97.8
MS.gene008814.t1 AT5G45050 50.000 90 44 1 146 235 1132 1220 4.40e-22 97.8
MS.gene008814.t1 AT1G30650 56.522 69 29 1 167 235 218 285 3.63e-20 90.9
MS.gene008814.t1 AT2G34830 56.522 69 29 1 167 235 216 283 3.70e-20 90.9
MS.gene008814.t1 AT2G34830 56.522 69 29 1 167 235 225 292 3.76e-20 90.9
MS.gene008814.t1 AT4G31550 52.308 65 31 0 167 231 246 310 1.78e-19 87.8
MS.gene008814.t1 AT4G31550 52.308 65 31 0 167 231 247 311 1.78e-19 87.8
MS.gene008814.t1 AT2G23320 56.140 57 25 0 167 223 241 297 1.15e-18 85.5
MS.gene008814.t1 AT1G29280 52.174 69 33 0 158 226 66 134 1.42e-18 84.3
MS.gene008814.t1 AT2G24570 49.231 65 33 0 167 231 244 308 1.72e-18 85.1
MS.gene008814.t1 AT3G58710 50.725 69 34 0 164 232 68 136 2.33e-18 84.0
MS.gene008814.t1 AT3G58710 50.725 69 34 0 164 232 69 137 2.54e-18 83.6
MS.gene008814.t1 AT5G28650 51.515 66 32 0 167 232 263 328 3.11e-18 84.3
MS.gene008814.t1 AT3G04670 51.515 66 32 0 167 232 263 328 3.71e-18 84.3
MS.gene008814.t1 AT4G24240 48.810 84 38 2 144 223 256 338 4.71e-18 84.0
MS.gene008814.t1 AT3G01080 47.436 78 36 3 162 239 201 273 5.15e-17 80.9
MS.gene008814.t1 AT3G01080 47.436 78 36 3 162 239 201 273 1.13e-16 80.9
MS.gene008814.t1 AT3G01080 47.541 61 31 1 166 226 344 403 1.25e-14 74.7
MS.gene008814.t1 AT3G01080 47.436 78 36 3 162 239 163 235 1.33e-16 80.5
MS.gene008814.t1 AT3G01080 47.541 61 31 1 166 226 306 365 1.67e-14 74.3
MS.gene008814.t1 AT2G30590 54.237 59 27 0 167 225 314 372 2.43e-16 79.3
MS.gene008814.t1 AT2G47260 37.391 115 66 3 139 249 148 260 2.31e-15 76.3
MS.gene008814.t1 AT3G62340 40.476 84 48 2 166 249 118 199 2.50e-15 75.5
MS.gene008814.t1 AT2G03340 47.761 67 34 1 166 232 415 480 2.73e-15 77.0
MS.gene008814.t1 AT2G03340 48.571 70 34 2 162 231 246 313 5.92e-14 72.8
MS.gene008814.t1 AT2G38470 50.000 80 36 3 147 226 167 242 3.73e-15 76.3
MS.gene008814.t1 AT2G38470 44.444 63 34 1 166 228 362 423 6.27e-13 69.7
MS.gene008814.t1 AT2G21900 39.362 94 52 2 139 228 78 170 1.53e-14 71.6
MS.gene008814.t1 AT5G56270 34.194 155 78 5 164 296 271 423 1.94e-14 74.3
MS.gene008814.t1 AT5G56270 44.444 63 34 1 166 228 487 548 4.94e-13 70.1
MS.gene008814.t1 AT4G30935 35.780 109 57 3 130 226 283 390 2.32e-14 73.9
MS.gene008814.t1 AT1G13960 40.816 98 48 4 147 239 205 297 2.44e-14 73.9
MS.gene008814.t1 AT1G13960 47.541 61 31 1 166 226 409 468 1.04e-13 72.0
MS.gene008814.t1 AT4G26440 45.946 74 38 2 164 237 176 247 3.40e-14 73.6
MS.gene008814.t1 AT4G26440 37.805 82 50 1 166 247 372 452 3.95e-12 67.4
MS.gene008814.t1 AT1G13960 40.816 98 48 4 147 239 52 144 5.13e-14 72.4
MS.gene008814.t1 AT1G13960 47.541 61 31 1 166 226 256 315 1.65e-13 70.9
MS.gene008814.t1 AT5G43290 55.172 58 25 1 166 223 114 170 1.03e-13 70.5
MS.gene008814.t1 AT2G30250 50.000 60 29 1 167 226 329 387 1.37e-13 71.2
MS.gene008814.t1 AT2G30250 48.387 62 30 2 165 226 165 224 5.23e-12 66.6
MS.gene008814.t1 AT1G64000 38.095 84 48 3 141 223 90 170 2.08e-13 68.6
MS.gene008814.t1 AT5G07100 35.455 110 64 3 165 268 116 224 5.76e-13 68.9
MS.gene008814.t1 AT5G07100 40.580 69 40 1 166 234 234 301 1.32e-12 67.8
MS.gene008814.t1 AT2G04880 48.333 60 30 1 167 226 308 366 6.61e-13 69.7
MS.gene008814.t1 AT5G41570 40.000 85 48 3 141 223 71 154 6.75e-13 66.6
MS.gene008814.t1 AT2G04880 48.333 60 30 1 167 226 284 342 6.95e-13 69.3
MS.gene008814.t1 AT1G29860 42.857 70 39 1 166 235 136 204 7.16e-13 68.2
MS.gene008814.t1 AT1G80840 43.548 62 35 0 166 227 146 207 7.29e-13 68.6
MS.gene008814.t1 AT2G40740 37.931 87 49 2 140 221 144 230 7.43e-13 68.6
MS.gene008814.t1 AT2G37260 38.095 84 48 2 143 223 323 405 9.76e-13 68.9
MS.gene008814.t1 AT2G37260 50.000 66 31 2 162 227 161 224 5.50e-12 66.6
MS.gene008814.t1 AT2G40740 37.931 87 49 2 140 221 153 239 9.87e-13 68.2
MS.gene008814.t1 AT4G18170 40.741 81 46 2 146 226 153 231 1.13e-12 68.2
MS.gene008814.t1 AT1G69310 39.773 88 51 2 137 224 119 204 1.31e-12 67.8
MS.gene008814.t1 AT1G69310 39.773 88 51 2 137 224 119 204 1.31e-12 67.8
MS.gene008814.t1 AT1G69310 39.773 88 51 2 137 224 119 204 1.31e-12 67.8
MS.gene008814.t1 AT5G07100 35.455 110 64 3 165 268 23 131 1.35e-12 66.6
MS.gene008814.t1 AT5G07100 40.580 69 40 1 166 234 141 208 3.02e-12 65.5
MS.gene008814.t1 AT5G07100 35.455 110 64 3 165 268 23 131 1.35e-12 66.6
MS.gene008814.t1 AT5G07100 40.580 69 40 1 166 234 141 208 3.02e-12 65.5
MS.gene008814.t1 AT5G07100 35.455 110 64 3 165 268 23 131 1.35e-12 66.6
MS.gene008814.t1 AT5G07100 40.580 69 40 1 166 234 141 208 3.02e-12 65.5
MS.gene008814.t1 AT5G07100 35.455 110 64 3 165 268 23 131 1.35e-12 66.6
MS.gene008814.t1 AT5G07100 40.580 69 40 1 166 234 141 208 3.02e-12 65.5
MS.gene008814.t1 AT1G55600 46.970 66 33 2 161 226 303 366 1.41e-12 68.6
MS.gene008814.t1 AT2G37260 38.095 84 48 2 143 223 243 325 1.47e-12 68.2
MS.gene008814.t1 AT2G37260 49.254 67 32 2 162 228 81 145 9.73e-12 65.5
MS.gene008814.t1 AT2G37260 38.095 84 48 2 143 223 241 323 1.48e-12 68.2
MS.gene008814.t1 AT2G37260 49.254 67 32 2 162 228 79 143 1.02e-11 65.5
MS.gene008814.t1 AT5G45260 41.026 78 43 2 167 242 1209 1285 1.59e-12 68.9
MS.gene008814.t1 AT5G26170 47.619 63 32 1 161 223 108 169 2.16e-12 65.1
MS.gene008814.t1 AT4G26640 39.423 104 56 5 165 265 210 309 3.03e-12 67.8
MS.gene008814.t1 AT4G26640 40.984 61 35 1 166 226 381 440 1.21e-11 65.9
MS.gene008814.t1 AT4G26640 39.423 104 56 5 165 265 170 269 3.17e-12 67.4
MS.gene008814.t1 AT4G26640 40.984 61 35 1 166 226 341 400 1.24e-11 65.9
MS.gene008814.t1 AT5G49520 44.262 61 33 1 166 226 221 280 3.93e-12 67.0
MS.gene008814.t1 AT4G26640 39.423 104 56 5 165 265 138 237 3.98e-12 67.4
MS.gene008814.t1 AT4G26640 40.984 61 35 1 166 226 309 368 1.46e-11 65.5
MS.gene008814.t1 AT4G26640 39.423 104 56 5 165 265 34 133 5.36e-12 66.6
MS.gene008814.t1 AT4G26640 40.984 61 35 1 166 226 205 264 1.42e-11 65.1
MS.gene008814.t1 AT4G26640 39.423 104 56 5 165 265 34 133 5.36e-12 66.6
MS.gene008814.t1 AT4G26640 40.984 61 35 1 166 226 205 264 1.42e-11 65.1
MS.gene008814.t1 AT4G26640 39.423 104 56 5 165 265 34 133 5.36e-12 66.6
MS.gene008814.t1 AT4G26640 40.984 61 35 1 166 226 205 264 1.42e-11 65.1
MS.gene008814.t1 AT4G26640 39.423 104 56 5 165 265 34 133 5.36e-12 66.6
MS.gene008814.t1 AT4G26640 40.984 61 35 1 166 226 205 264 1.42e-11 65.1
MS.gene008814.t1 AT5G46350 41.333 75 42 2 152 226 170 242 6.97e-12 65.9
MS.gene008814.t1 AT2G46400 43.182 88 45 3 139 221 74 161 1.11e-11 65.1
MS.gene008814.t1 AT3G01970 40.845 71 39 2 166 234 65 134 2.64e-11 61.2
MS.gene008814.t1 AT2G44745 34.694 98 62 2 127 223 105 201 3.55e-11 62.4
MS.gene008814.t1 AT4G12020 35.135 111 62 5 147 251 444 550 4.05e-11 64.7
MS.gene008814.t1 AT4G12020 35.135 111 62 5 147 251 444 550 4.32e-11 64.7
MS.gene008814.t1 AT4G12020 35.135 111 62 5 147 251 444 550 4.56e-11 64.7
MS.gene008814.t1 AT4G12020 35.135 111 62 5 147 251 444 550 4.65e-11 64.7
MS.gene008814.t1 AT4G12020 35.135 111 62 5 147 251 444 550 5.15e-11 64.3
MS.gene008814.t1 AT4G12020 35.135 111 62 5 147 251 444 550 5.15e-11 64.3
MS.gene008814.t1 AT4G12020 35.135 111 62 5 147 251 444 550 5.18e-11 64.3
MS.gene008814.t1 AT4G12020 35.135 111 62 5 147 251 444 550 5.18e-11 64.3
MS.gene008814.t1 AT4G12020 35.135 111 62 5 147 251 444 550 5.33e-11 64.3
MS.gene008814.t1 AT4G12020 35.135 111 62 5 147 251 377 483 5.69e-11 64.3
MS.gene008814.t1 AT4G22070 40.000 60 36 0 167 226 298 357 6.44e-11 63.5
MS.gene008814.t1 AT4G22070 40.000 60 36 0 167 226 298 357 6.44e-11 63.5
MS.gene008814.t1 AT4G22070 40.000 60 36 0 167 226 298 357 6.44e-11 63.5
MS.gene008814.t1 AT4G22070 40.000 60 36 0 167 226 298 357 6.44e-11 63.5
MS.gene008814.t1 AT4G04450 38.462 65 40 0 167 231 199 263 9.44e-11 62.8

Find 81 sgRNAs with CRISPR-Local

Find 144 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTACAAATGTAGAAGTTTC+TGG 0.203501 8.1:-34689198 MS.gene008814:CDS
AGTCTTTGATGACTTGTTTC+GGG 0.228480 8.1:+34689051 None:intergenic
TGGATGTGGAGACCCTTTAA+TGG 0.287579 8.1:+34690361 None:intergenic
AACGGCAACATCGCCATATT+AGG 0.297130 8.1:+34688971 None:intergenic
TGCGATTTCACTGCGGGCAT+GGG 0.316131 8.1:+34690717 None:intergenic
TAGTGAAGATGGTGGTAGTG+GGG 0.325049 8.1:+34690923 None:intergenic
AAACTTGGAATCGCCTAATA+TGG 0.330985 8.1:-34688984 MS.gene008814:CDS
AGGGTGGCGAATGTGGTTGT+AGG 0.331360 8.1:+34690898 None:intergenic
CAAAATTTAAATCAAGAAAA+AGG 0.335426 8.1:-34690564 MS.gene008814:intron
TAGTCTTTGATGACTTGTTT+CGG 0.341304 8.1:+34689050 None:intergenic
GTAGTGATGGTAGGTATGAT+AGG 0.345611 8.1:+34690862 None:intergenic
GTAGTTGATTGCGCTTTCTC+AGG 0.345960 8.1:+34690644 None:intergenic
ACTTATGTTGTGACATATAA+AGG 0.361618 8.1:-34689127 MS.gene008814:CDS
TTGCGATTTCACTGCGGGCA+TGG 0.375796 8.1:+34690716 None:intergenic
TACACTTCATTGTTACGGTT+TGG 0.377794 8.1:+34690751 None:intergenic
AGTTCTTACCGATACGTCTA+TGG 0.380944 8.1:-34688921 MS.gene008814:CDS
GGATGTGGAGACCCTTTAAT+GGG 0.385486 8.1:+34690362 None:intergenic
GGTAGTGAAGATGGTGGTAG+TGG 0.395152 8.1:+34690921 None:intergenic
TTTGTTCGAGGTAGTAGAAA+TGG 0.396886 8.1:+34690622 None:intergenic
AAACATGACACCTATGTTAG+AGG 0.407154 8.1:-34688858 MS.gene008814:CDS
AGGGGTTGTTGTGGAATTGA+TGG 0.409578 8.1:+34690664 None:intergenic
AGAGGTGGGGATAGTGGTGT+TGG 0.411378 8.1:+34690963 None:intergenic
CGCTTTCTCAGGGGTTGTTG+TGG 0.415304 8.1:+34690655 None:intergenic
CTACAAATGTAGAAGTTTCT+GGG 0.423709 8.1:-34689197 MS.gene008814:CDS
TATGTTAGAGGAACTCTTGA+TGG 0.425077 8.1:-34688846 MS.gene008814:CDS
TAGAAGTTTCTGGGATTGTT+CGG 0.428728 8.1:-34689188 MS.gene008814:CDS
GGGTGGCGAATGTGGTTGTA+GGG 0.432234 8.1:+34690899 None:intergenic
GATGGTAGAGGTGGGGATAG+TGG 0.437887 8.1:+34690957 None:intergenic
ACTTGAGCCTCGTTGCTCTC+TGG 0.448771 8.1:+34688941 None:intergenic
ACGAGCCTTCAGAAGATTCA+TGG 0.450159 8.1:-34690409 MS.gene008814:CDS
GAGGTGGGGATAGTGGTGTT+GGG 0.454610 8.1:+34690964 None:intergenic
AAACATACACTTCATTGTTA+CGG 0.454894 8.1:+34690746 None:intergenic
TCTAACATAGGTGTCATGTT+TGG 0.456315 8.1:+34688860 None:intergenic
TAGTGATGGTAGGTATGATA+GGG 0.457142 8.1:+34690863 None:intergenic
TTAATCAGAACTCTGTTGTT+GGG 0.469555 8.1:-34689078 MS.gene008814:CDS
AGGGGTAGTGGTGGTGAGGG+TGG 0.470018 8.1:+34690882 None:intergenic
AGTGAAGATGGTGGTAGTGG+GGG 0.472105 8.1:+34690924 None:intergenic
GTTAATCAGAACTCTGTTGT+TGG 0.473025 8.1:-34689079 MS.gene008814:CDS
GGTGGTGAGGGTGGCGAATG+TGG 0.473258 8.1:+34690891 None:intergenic
TTATGCATTGGCAAAGAAGC+TGG 0.473516 8.1:-34689025 MS.gene008814:CDS
GTAGTGAAGATGGTGGTAGT+GGG 0.473726 8.1:+34690922 None:intergenic
GAATGCACAATCAAAATTGT+TGG 0.476039 8.1:+34690693 None:intergenic
TGATAGGGGTAGTGGTGGTG+AGG 0.478349 8.1:+34690878 None:intergenic
TAGTTGATTGCGCTTTCTCA+GGG 0.481392 8.1:+34690645 None:intergenic
TTGCGCAAATGTCAGAAACT+TGG 0.482429 8.1:-34688999 MS.gene008814:CDS
GTTGGTTGCGATTTCACTGC+GGG 0.484377 8.1:+34690711 None:intergenic
GGTTGTAGGGGTAGTGAAGA+TGG 0.488717 8.1:+34690912 None:intergenic
ATAGAGCACCACTATTGATC+TGG 0.502409 8.1:+34688816 None:intergenic
ACAGAGTTCTGATTAACTGC+TGG 0.506512 8.1:+34689085 None:intergenic
TTGCTCTCTGGCTGATCTAA+CGG 0.509856 8.1:+34688953 None:intergenic
GTTGTTGTGGAATTGATGGA+TGG 0.514803 8.1:+34690668 None:intergenic
GATAGGGGTAGTGGTGGTGA+GGG 0.522610 8.1:+34690879 None:intergenic
GGTGTGAGCAGTGATGGTAG+AGG 0.528684 8.1:+34690945 None:intergenic
GTGAGCAGTGATGGTAGAGG+TGG 0.533809 8.1:+34690948 None:intergenic
ATCAAGAGTTCCTCTAACAT+AGG 0.540304 8.1:+34688848 None:intergenic
TGAGCAGTGATGGTAGAGGT+GGG 0.544379 8.1:+34690949 None:intergenic
ATTAGTCGTTGTAGTAGTGA+TGG 0.545537 8.1:+34690849 None:intergenic
GGTAGGTATGATAGGGGTAG+TGG 0.546289 8.1:+34690870 None:intergenic
GCGATTTCACTGCGGGCATG+GGG 0.547693 8.1:+34690718 None:intergenic
CATGCCCATGAATCTTCTGA+AGG 0.555237 8.1:+34690404 None:intergenic
GACTTGAACCAGATCAATAG+TGG 0.561347 8.1:-34688824 MS.gene008814:CDS
GGTGGCGAATGTGGTTGTAG+GGG 0.565157 8.1:+34690900 None:intergenic
AGGTGGGGATAGTGGTGTTG+GGG 0.565500 8.1:+34690965 None:intergenic
CGAGCCTTCAGAAGATTCAT+GGG 0.566390 8.1:-34690408 MS.gene008814:CDS
AGTGATGGTAGGTATGATAG+GGG 0.566864 8.1:+34690864 None:intergenic
CATGGCACACAAATGTCACT+TGG 0.574104 8.1:+34690441 None:intergenic
TTAAAGGGTCTCCACATCCA+AGG 0.584498 8.1:-34690358 MS.gene008814:intron
TCAAAGACTAGATTATGCAT+TGG 0.588584 8.1:-34689037 MS.gene008814:CDS
AAGGCTCGTCTTCCCTCACA+TGG 0.597848 8.1:+34690423 None:intergenic
CACAACATAAGTGTTCTCAC+TGG 0.597849 8.1:+34689138 None:intergenic
CTTCAGAAGATTCATGGGCA+TGG 0.598976 8.1:-34690403 MS.gene008814:CDS
GACATTTGTGTGCCATGTGA+GGG 0.624856 8.1:-34690435 MS.gene008814:CDS
CTTTGATGACTTGTTTCGGG+AGG 0.626610 8.1:+34689054 None:intergenic
GTCGTTGTAGTAGTGATGGT+AGG 0.641331 8.1:+34690853 None:intergenic
TGACATTTGTGTGCCATGTG+AGG 0.643817 8.1:-34690436 MS.gene008814:CDS
AGGTATGATAGGGGTAGTGG+TGG 0.649146 8.1:+34690873 None:intergenic
AGTTGATTGCGCTTTCTCAG+GGG 0.662828 8.1:+34690646 None:intergenic
TGTAGGGGTAGTGAAGATGG+TGG 0.689397 8.1:+34690915 None:intergenic
GAGCAGTGATGGTAGAGGTG+GGG 0.706368 8.1:+34690950 None:intergenic
TGTTGGTTGCGATTTCACTG+CGG 0.712957 8.1:+34690710 None:intergenic
AGATCAGCCAGAGAGCAACG+AGG 0.772309 8.1:-34688948 MS.gene008814:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAAAATATAATAAATAAT+AGG + chr8.1:34689265-34689284 None:intergenic 0.0%
!! AAATTTATTTATAGTGAAAT+TGG - chr8.1:34689967-34689986 MS.gene008814:intron 10.0%
!!! TTCACTATAAATAAATTTTA+CGG + chr8.1:34689965-34689984 None:intergenic 10.0%
!! CAAAATTTAAATCAAGAAAA+AGG - chr8.1:34689226-34689245 MS.gene008814:intron 15.0%
!! TATATACATTTATATGTGTA+TGG - chr8.1:34690496-34690515 MS.gene008814:intron 15.0%
!! TATCAAAATAAGGATTAAAA+TGG + chr8.1:34690005-34690024 None:intergenic 15.0%
!! TATTAAATAGTACAATTTAG+CGG - chr8.1:34690526-34690545 MS.gene008814:intron 15.0%
!!! ATGAAATGTATAATGATTTT+AGG + chr8.1:34689307-34689326 None:intergenic 15.0%
!!! CTTTTTCTTGATTTAAATTT+TGG + chr8.1:34689228-34689247 None:intergenic 15.0%
!!! GATTTAAATTTTGGTTTTTT+CGG + chr8.1:34689219-34689238 None:intergenic 15.0%
!!! GATTTTATTCTATCAAAATA+AGG + chr8.1:34690015-34690034 None:intergenic 15.0%
!!! AAAGTGAAAGATATTGATTT+AGG + chr8.1:34690253-34690272 None:intergenic 20.0%
!!! AAATATACCACTTTTTCTTT+TGG + chr8.1:34690111-34690130 None:intergenic 20.0%
!!! AATGAAGTGAGATTTTTTTT+TGG + chr8.1:34690385-34690404 None:intergenic 20.0%
! AAAAGAGAGGATATATTTGT+AGG - chr8.1:34690152-34690171 MS.gene008814:intron 25.0%
! AAACATACACTTCATTGTTA+CGG + chr8.1:34689047-34689066 None:intergenic 25.0%
! AAAGAGAGGATATATTTGTA+GGG - chr8.1:34690153-34690172 MS.gene008814:intron 25.0%
! ACTTATGTTGTGACATATAA+AGG - chr8.1:34690663-34690682 MS.gene008814:CDS 25.0%
! AGGATTAAAATGGATATTGA+AGG + chr8.1:34689995-34690014 None:intergenic 25.0%
! ATAAAGACCAAAAGAAAAAG+TGG - chr8.1:34690101-34690120 MS.gene008814:intron 25.0%
! ATGTAACAAAATTCTTCCAA+TGG + chr8.1:34689586-34689605 None:intergenic 25.0%
! CTAATATGAATAAAGTTTGC+AGG - chr8.1:34690064-34690083 MS.gene008814:intron 25.0%
! GGATTAAAATGGATATTGAA+GGG + chr8.1:34689994-34690013 None:intergenic 25.0%
! TTAACTACAATTCTTTCCAA+TGG + chr8.1:34689664-34689683 None:intergenic 25.0%
!! AAAAATCTAGAATTTGTTCG+AGG + chr8.1:34689183-34689202 None:intergenic 25.0%
!! AAATCGATGAATGATTTTGT+AGG - chr8.1:34690565-34690584 MS.gene008814:CDS 25.0%
!! CACTATTTAAAACTCTAGTT+GGG + chr8.1:34689619-34689638 None:intergenic 25.0%
!! GTGGTATATTTTGTAAGAAA+AGG - chr8.1:34690120-34690139 MS.gene008814:intron 25.0%
!! TCACTATTTAAAACTCTAGT+TGG + chr8.1:34689620-34689639 None:intergenic 25.0%
!!! ATGTACTGTTAATTGCTTTT+TGG - chr8.1:34689826-34689845 MS.gene008814:intron 25.0%
!!! CTAGAGTTTTAAATAGTGAT+CGG - chr8.1:34689621-34689640 MS.gene008814:intron 25.0%
AAGAGAGGATATATTTGTAG+GGG - chr8.1:34690154-34690173 MS.gene008814:intron 30.0%
AAGGAAGAAAAAGAAAAGAG+AGG - chr8.1:34690139-34690158 MS.gene008814:intron 30.0%
ACAAAATTCTTCCAATGGTA+AGG + chr8.1:34689581-34689600 None:intergenic 30.0%
ACAATTACACCTTTGATCTT+TGG - chr8.1:34689917-34689936 MS.gene008814:intron 30.0%
ACTACAAATGTAGAAGTTTC+TGG - chr8.1:34690592-34690611 MS.gene008814:CDS 30.0%
ATGGAGAAAAACCCATTAAA+GGG - chr8.1:34689417-34689436 MS.gene008814:intron 30.0%
CAAAAAATGTTACATCTGCA+TGG + chr8.1:34689869-34689888 None:intergenic 30.0%
CGTTTAATGCATAAAAACCT+TGG + chr8.1:34689452-34689471 None:intergenic 30.0%
CTACAAATGTAGAAGTTTCT+GGG - chr8.1:34690593-34690612 MS.gene008814:CDS 30.0%
GAATGCACAATCAAAATTGT+TGG + chr8.1:34689100-34689119 None:intergenic 30.0%
TACAATTCTTTCCAATGGTA+AGG + chr8.1:34689659-34689678 None:intergenic 30.0%
TATGGAGAAAAACCCATTAA+AGG - chr8.1:34689416-34689435 MS.gene008814:intron 30.0%
TCAAAGACTAGATTATGCAT+TGG - chr8.1:34690753-34690772 MS.gene008814:CDS 30.0%
TGTGTTTCCTAAAAATCAGA+GGG + chr8.1:34689900-34689919 None:intergenic 30.0%
TTAATCAGAACTCTGTTGTT+GGG - chr8.1:34690712-34690731 MS.gene008814:CDS 30.0%
TTGTGTTTCCTAAAAATCAG+AGG + chr8.1:34689901-34689920 None:intergenic 30.0%
! CACTATTTAAAACTCTAGGT+GGG + chr8.1:34689541-34689560 None:intergenic 30.0%
!! TAGTCTTTGATGACTTGTTT+CGG + chr8.1:34690743-34690762 None:intergenic 30.0%
!!! AGTTTTAAATAGTGATCGGA+AGG - chr8.1:34689625-34689644 MS.gene008814:intron 30.0%
AAACATGACACCTATGTTAG+AGG - chr8.1:34690932-34690951 MS.gene008814:CDS 35.0%
AAACTTGGAATCGCCTAATA+TGG - chr8.1:34690806-34690825 MS.gene008814:CDS 35.0%
ATATGTCACTCAGTGTAAGA+CGG - chr8.1:34690443-34690462 MS.gene008814:CDS 35.0%
ATCAAGAGTTCCTCTAACAT+AGG + chr8.1:34690945-34690964 None:intergenic 35.0%
ATGCATAAAAACCTTGGATG+TGG + chr8.1:34689446-34689465 None:intergenic 35.0%
ATTAGTCGTTGTAGTAGTGA+TGG + chr8.1:34688944-34688963 None:intergenic 35.0%
CAAAAACTCCATAGACGTAT+CGG + chr8.1:34690880-34690899 None:intergenic 35.0%
CATCAAAGACCAAAGATCAA+AGG + chr8.1:34689929-34689948 None:intergenic 35.0%
GTAGTTAAATGCAACATACG+TGG - chr8.1:34689676-34689695 MS.gene008814:intron 35.0%
GTTAATCAGAACTCTGTTGT+TGG - chr8.1:34690711-34690730 MS.gene008814:CDS 35.0%
TACACTTCATTGTTACGGTT+TGG + chr8.1:34689042-34689061 None:intergenic 35.0%
TAGTGATGGTAGGTATGATA+GGG + chr8.1:34688930-34688949 None:intergenic 35.0%
TATGTTAGAGGAACTCTTGA+TGG - chr8.1:34690944-34690963 MS.gene008814:CDS 35.0%
TCATGGGCATGGAAAAAATA+TGG - chr8.1:34689398-34689417 MS.gene008814:intron 35.0%
TCTTACACTGAGTGACATAT+TGG + chr8.1:34690443-34690462 None:intergenic 35.0%
TTTGTTCGAGGTAGTAGAAA+TGG + chr8.1:34689171-34689190 None:intergenic 35.0%
! CCACTATTTAAAACTCTAGG+TGG + chr8.1:34689542-34689561 None:intergenic 35.0%
! CGACCACTATTTAAAACTCT+AGG + chr8.1:34689545-34689564 None:intergenic 35.0%
! GATACGTCTATGGAGTTTTT+GGG - chr8.1:34690879-34690898 MS.gene008814:CDS 35.0%
! GTTTAGTCCCTCTGATTTTT+AGG - chr8.1:34689890-34689909 MS.gene008814:intron 35.0%
! TCTAACATAGGTGTCATGTT+TGG + chr8.1:34690933-34690952 None:intergenic 35.0%
!! AGTCTTTGATGACTTGTTTC+GGG + chr8.1:34690742-34690761 None:intergenic 35.0%
!! TAGAAGTTTCTGGGATTGTT+CGG - chr8.1:34690602-34690621 MS.gene008814:CDS 35.0%
!!! CCACCTAGAGTTTTAAATAG+TGG - chr8.1:34689539-34689558 MS.gene008814:intron 35.0%
!!! GGTTTTTTCGGATGTGTATT+TGG + chr8.1:34689207-34689226 None:intergenic 35.0%
AAGACCATGATCCTTACCAT+TGG - chr8.1:34689567-34689586 MS.gene008814:intron 40.0%
AGTGATGGTAGGTATGATAG+GGG + chr8.1:34688929-34688948 None:intergenic 40.0%
AGTTCTTACCGATACGTCTA+TGG - chr8.1:34690869-34690888 MS.gene008814:CDS 40.0%
CACAACATAAGTGTTCTCAC+TGG + chr8.1:34690655-34690674 None:intergenic 40.0%
CTTTCCAATGGTAAGGATCA+TGG + chr8.1:34689652-34689671 None:intergenic 40.0%
GACTTGAACCAGATCAATAG+TGG - chr8.1:34690966-34690985 MS.gene008814:CDS 40.0%
GTAGTGATGGTAGGTATGAT+AGG + chr8.1:34688931-34688950 None:intergenic 40.0%
GTTGTTGTGGAATTGATGGA+TGG + chr8.1:34689125-34689144 None:intergenic 40.0%
TAGTTGATTGCGCTTTCTCA+GGG + chr8.1:34689148-34689167 None:intergenic 40.0%
TCTTCCAATGGTAAGGATCA+TGG + chr8.1:34689574-34689593 None:intergenic 40.0%
TTGCGCAAATGTCAGAAACT+TGG - chr8.1:34690791-34690810 MS.gene008814:CDS 40.0%
! AACATACGTGGTCTTAATCG+CGG - chr8.1:34689688-34689707 MS.gene008814:intron 40.0%
! ACAGAGTTCTGATTAACTGC+TGG + chr8.1:34690708-34690727 None:intergenic 40.0%
! ATAGAGCACCACTATTGATC+TGG + chr8.1:34690977-34690996 None:intergenic 40.0%
! CGATACGTCTATGGAGTTTT+TGG - chr8.1:34690878-34690897 MS.gene008814:CDS 40.0%
! TTATGCATTGGCAAAGAAGC+TGG - chr8.1:34690765-34690784 MS.gene008814:CDS 40.0%
AACGGCAACATCGCCATATT+AGG + chr8.1:34690822-34690841 None:intergenic 45.0%
ACGAGCCTTCAGAAGATTCA+TGG - chr8.1:34689381-34689400 MS.gene008814:intron 45.0%
AGGACCATGATCCTTACCAT+TGG - chr8.1:34689645-34689664 MS.gene008814:intron 45.0%
AGGGGTTGTTGTGGAATTGA+TGG + chr8.1:34689129-34689148 None:intergenic 45.0%
AGTTGATTGCGCTTTCTCAG+GGG + chr8.1:34689147-34689166 None:intergenic 45.0%
CATGCCCATGAATCTTCTGA+AGG + chr8.1:34689389-34689408 None:intergenic 45.0%
CATGGCACACAAATGTCACT+TGG + chr8.1:34689352-34689371 None:intergenic 45.0%
CGAGCCTTCAGAAGATTCAT+GGG - chr8.1:34689382-34689401 MS.gene008814:intron 45.0%
CTTCAGAAGATTCATGGGCA+TGG - chr8.1:34689387-34689406 MS.gene008814:intron 45.0%
GACATTTGTGTGCCATGTGA+GGG - chr8.1:34689355-34689374 MS.gene008814:intron 45.0%
GGATGTGGAGACCCTTTAAT+GGG + chr8.1:34689431-34689450 None:intergenic 45.0%
GTAGTTGATTGCGCTTTCTC+AGG + chr8.1:34689149-34689168 None:intergenic 45.0%
GTCGTTGTAGTAGTGATGGT+AGG + chr8.1:34688940-34688959 None:intergenic 45.0%
TGACATTTGTGTGCCATGTG+AGG - chr8.1:34689354-34689373 MS.gene008814:intron 45.0%
TGGATGTGGAGACCCTTTAA+TGG + chr8.1:34689432-34689451 None:intergenic 45.0%
TTAAAGGGTCTCCACATCCA+AGG - chr8.1:34689432-34689451 MS.gene008814:intron 45.0%
TTGCTCTCTGGCTGATCTAA+CGG + chr8.1:34690840-34690859 None:intergenic 45.0%
! GTAGTGAAGATGGTGGTAGT+GGG + chr8.1:34688871-34688890 None:intergenic 45.0%
! GTGTCGCTCATTGCAAAGAA+TGG + chr8.1:34689756-34689775 None:intergenic 45.0%
! TAGTGAAGATGGTGGTAGTG+GGG + chr8.1:34688870-34688889 None:intergenic 45.0%
! TGTTGGTTGCGATTTCACTG+CGG + chr8.1:34689083-34689102 None:intergenic 45.0%
!! CTTTGATGACTTGTTTCGGG+AGG + chr8.1:34690739-34690758 None:intergenic 45.0%
CTCTAGGTGGGTGTGTGTTT+AGG + chr8.1:34689529-34689548 None:intergenic 50.0%
GGTAGGTATGATAGGGGTAG+TGG + chr8.1:34688923-34688942 None:intergenic 50.0%
GGTTGTAGGGGTAGTGAAGA+TGG + chr8.1:34688881-34688900 None:intergenic 50.0%
GTTGGTTGCGATTTCACTGC+GGG + chr8.1:34689082-34689101 None:intergenic 50.0%
TGAGCAGTGATGGTAGAGGT+GGG + chr8.1:34688844-34688863 None:intergenic 50.0%
TGTAGGGGTAGTGAAGATGG+TGG + chr8.1:34688878-34688897 None:intergenic 50.0%
! AGGTATGATAGGGGTAGTGG+TGG + chr8.1:34688920-34688939 None:intergenic 50.0%
! GGTAGTGAAGATGGTGGTAG+TGG + chr8.1:34688872-34688891 None:intergenic 50.0%
!! AGTGAAGATGGTGGTAGTGG+GGG + chr8.1:34688869-34688888 None:intergenic 50.0%
AAGGCTCGTCTTCCCTCACA+TGG + chr8.1:34689370-34689389 None:intergenic 55.0%
ACTTGAGCCTCGTTGCTCTC+TGG + chr8.1:34690852-34690871 None:intergenic 55.0%
AGATCAGCCAGAGAGCAACG+AGG - chr8.1:34690842-34690861 MS.gene008814:CDS 55.0%
AGGGTGGCGAATGTGGTTGT+AGG + chr8.1:34688895-34688914 None:intergenic 55.0%
CGCTTTCTCAGGGGTTGTTG+TGG + chr8.1:34689138-34689157 None:intergenic 55.0%
GAGCAGTGATGGTAGAGGTG+GGG + chr8.1:34688843-34688862 None:intergenic 55.0%
GATGGTAGAGGTGGGGATAG+TGG + chr8.1:34688836-34688855 None:intergenic 55.0%
GGGTGGCGAATGTGGTTGTA+GGG + chr8.1:34688894-34688913 None:intergenic 55.0%
GGTGGCGAATGTGGTTGTAG+GGG + chr8.1:34688893-34688912 None:intergenic 55.0%
GGTGTGAGCAGTGATGGTAG+AGG + chr8.1:34688848-34688867 None:intergenic 55.0%
GTGAGCAGTGATGGTAGAGG+TGG + chr8.1:34688845-34688864 None:intergenic 55.0%
TGCGATTTCACTGCGGGCAT+GGG + chr8.1:34689076-34689095 None:intergenic 55.0%
TTGCGATTTCACTGCGGGCA+TGG + chr8.1:34689077-34689096 None:intergenic 55.0%
! AGAGGTGGGGATAGTGGTGT+TGG + chr8.1:34688830-34688849 None:intergenic 55.0%
! AGGTGGGGATAGTGGTGTTG+GGG + chr8.1:34688828-34688847 None:intergenic 55.0%
! GAGGTGGGGATAGTGGTGTT+GGG + chr8.1:34688829-34688848 None:intergenic 55.0%
! GATAGGGGTAGTGGTGGTGA+GGG + chr8.1:34688914-34688933 None:intergenic 55.0%
! TGATAGGGGTAGTGGTGGTG+AGG + chr8.1:34688915-34688934 None:intergenic 55.0%
GCGATTTCACTGCGGGCATG+GGG + chr8.1:34689075-34689094 None:intergenic 60.0%
! AGTGGGGGTGTGAGCAGTGA+TGG + chr8.1:34688854-34688873 None:intergenic 60.0%
GGTGGTGAGGGTGGCGAATG+TGG + chr8.1:34688902-34688921 None:intergenic 65.0%
! AGGGGTAGTGGTGGTGAGGG+TGG + chr8.1:34688911-34688930 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr8.1 gene 34688808 34691004 34688808 ID=MS.gene008814
chr8.1 mRNA 34688808 34691004 34688808 ID=MS.gene008814.t1;Parent=MS.gene008814
chr8.1 exon 34690565 34691004 34690565 ID=MS.gene008814.t1.exon1;Parent=MS.gene008814.t1
chr8.1 CDS 34690565 34691004 34690565 ID=cds.MS.gene008814.t1;Parent=MS.gene008814.t1
chr8.1 exon 34690359 34690475 34690359 ID=MS.gene008814.t1.exon2;Parent=MS.gene008814.t1
chr8.1 CDS 34690359 34690475 34690359 ID=cds.MS.gene008814.t1;Parent=MS.gene008814.t1
chr8.1 exon 34688808 34689225 34688808 ID=MS.gene008814.t1.exon3;Parent=MS.gene008814.t1
chr8.1 CDS 34688808 34689225 34688808 ID=cds.MS.gene008814.t1;Parent=MS.gene008814.t1
Gene Sequence

>MS.gene008814

ATGGTACTTAAATTCTACCCCAACACCACTATCCCCACCTCTACCATCACTGCTCACACCCCCACTACCACCATCTTCACTACCCCTACAACCACATTCGCCACCCTCACCACCACTACCCCTATCATACCTACCATCACTACTACAACGACTAATACTAGTGTTTGTAAAACAAATCAATATCTTACAATTTCTGACTATCAAATACTCGTCGAACAACAACAGAATCAACCAAACCGTAACAATGAAGTGTATGTTTCTGAACCCCATGCCCGCAGTGAAATCGCAACCAACAATTTTGATTGTGCATTCAACCATCCATCAATTCCACAACAACCCCTGAGAAAGCGCAATCAACTACCATTTCTACTACCTCGAACAAATTCTAGATTTTTACCAAATACACATCCGAAAAAACCAAAATTTAAATCAAGAAAAAGGTAAAATATTTATTCCTATTATTTATTATATTTTAATTATATCAATTTTATTGTGACCTAAAATCATTATACATTTCATTTTTTTACAGAAAAAATAATAACCAAGTGACATTTGTGTGCCATGTGAGGGAAGACGAGCCTTCAGAAGATTCATGGGCATGGAAAAAATATGGAGAAAAACCCATTAAAGGGTCTCCACATCCAAGGTTTTTATGCATTAAACGCTCTAAATTTACATATTTGTCTTCTATTTCATGTTAAAAATAATAATTTTGTTACCTAAACACACACCCACCTAGAGTTTTAAATAGTGGTCGCAAAGACCATGATCCTTACCATTGGAAGAATTTTGTTACATAATACACACACCCAACTAGAGTTTTAAATAGTGATCGGAAGGACCATGATCCTTACCATTGGAAAGAATTGTAGTTAAATGCAACATACGTGGTCTTAATCGCGGTTGCATTTGCATTTCAATTTAAAAATATCAAAAGTTATTACTCCATTCTTTGCAATGAGCGACACATTTTCAAAATTAAATTTTGTGACAAAATGAATGTCACTATTAATTTTCAATGTACTGTTAATTGCTTTTTGGTTTGATATGTTCTTAGTCCATGCAGATGTAACATTTTTTGCGTTTAGTCCCTCTGATTTTTAGGAAACACAATTACACCTTTGATCTTTGGTCTTTGATGTTTGTTTTAGTTTCCGTAAAATTTATTTATAGTGAAATTGGTCCCTTCAATATCCATTTTAATCCTTATTTTGATAGAATAAAATCAAATATTCTACATATTAGAGAGATCAATTCTAATATGAATAAAGTTTGCAGGAGTAAAACAAAACAATAAAGACCAAAAGAAAAAGTGGTATATTTTGTAAGAAAAGGAAGAAAAAGAAAAGAGAGGATATATTTGTAGGGGCTAAAAACATATTTAAAACTCACTTTTTATTTTTTTTCAATTGTAATATTTAATTGATTTAATACACATCACTCATAAATCAATATCTTTCACTTTATTTAAATCTCACGTCATTTTTTTTCAATTGTAATATTTAATTGATTTTAAACACATCACTCCTAAATCAATATCTTTCACTTTATTTAAATCTCACTTCATTTCACTACCAAAAAAAAATCTCACTTCATTTATATATATATTTTTTTAAATATGTATAAATTAAACCAATATGTCACTCAGTGTAAGACGGATTCAGATTGCATACTGTAAAACTCTCTAATATATACATTTATATGTGTATGGTTTTATCTATTAAATAGTACAATTTAGCGGTGTTTGATATGAAAAGAAATCGATGAATGATTTTGTAGGAGCTACTACAAATGTAGAAGTTTCTGGGATTGTTCGGCAAAAAAACTAGTAGAGAAAAGCAAAACCAGTGAGAACACTTATGTTGTGACATATAAAGGAGAACACAATCATGAAAAACCAGCAGTTAATCAGAACTCTGTTGTTGGGACCTCCCGAAACAAGTCATCAAAGACTAGATTATGCATTGGCAAAGAAGCTGGATCTTGCGCAAATGTCAGAAACTTGGAATCGCCTAATATGGCGATGTTGCCGTTAGATCAGCCAGAGAGCAACGAGGCTCAAGTTCTTACCGATACGTCTATGGAGTTTTTGGGAAGCTCTGATGACGATGTCATTTTGATACCAAACATGACACCTATGTTAGAGGAACTCTTGATGGACTTGAACCAGATCAATAGTGGTGCTCTATTCCCTTAG
Protein sequence

>MS.gene008814.t1

MVLKFYPNTTIPTSTITAHTPTTTIFTTPTTTFATLTTTTPIIPTITTTTTNTSVCKTNQYLTISDYQILVEQQQNQPNRNNEVYVSEPHARSEIATNNFDCAFNHPSIPQQPLRKRNQLPFLLPRTNSRFLPNTHPKKPKFKSRKRKNNNQVTFVCHVREDEPSEDSWAWKKYGEKPIKGSPHPRSYYKCRSFWDCSAKKLVEKSKTSENTYVVTYKGEHNHEKPAVNQNSVVGTSRNKSSKTRLCIGKEAGSCANVRNLESPNMAMLPLDQPESNEAQVLTDTSMEFLGSSDDDVILIPNMTPMLEELLMDLNQINSGALFP