AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene008990

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene008990.t1 MTR_8g067280 96.148 649 24 1 1 649 1 648 0.0 1198
MS.gene008990.t1 MTR_5g030430 59.599 698 207 19 3 647 2 677 0.0 707
MS.gene008990.t1 MTR_5g030420 61.905 210 73 4 34 238 5 212 1.24e-84 265
MS.gene008990.t1 MTR_5g030420 61.905 210 73 4 34 238 5 212 1.64e-84 266
MS.gene008990.t1 MTR_8g024790 47.619 210 81 4 445 644 273 463 1.51e-52 188
MS.gene008990.t1 MTR_8g024790 30.244 205 106 5 43 243 19 190 3.57e-24 106
MS.gene008990.t1 MTR_8g024770 49.741 193 89 3 445 636 261 446 1.59e-50 182
MS.gene008990.t1 MTR_8g024770 23.588 301 156 7 67 333 36 296 2.89e-18 88.6
MS.gene008990.t1 MTR_8g027495 43.750 224 99 6 420 640 418 617 1.10e-36 145
MS.gene008990.t1 MTR_8g027495 34.694 196 110 8 52 234 51 241 2.69e-21 99.0
MS.gene008990.t1 MTR_7g096350 39.474 228 85 5 414 623 288 480 3.76e-36 142
MS.gene008990.t1 MTR_7g096350 29.348 184 122 6 53 234 49 226 1.20e-14 77.4
MS.gene008990.t1 MTR_7g117670 40.000 190 88 4 455 640 394 561 1.10e-33 136
MS.gene008990.t1 MTR_7g117670 29.439 214 114 9 52 239 48 250 6.08e-15 78.6
MS.gene008990.t1 MTR_4g067010 34.731 167 85 4 444 610 138 280 6.88e-20 91.7
MS.gene008990.t1 MTR_1g072320 31.579 190 109 6 54 234 11 188 1.04e-19 94.0
MS.gene008990.t1 MTR_1g072320 32.099 162 95 2 463 618 470 622 4.87e-19 91.7
MS.gene008990.t1 MTR_5g014640 36.364 165 72 5 452 609 147 285 2.25e-19 90.1
MS.gene008990.t1 MTR_0194s0050 29.252 294 164 14 385 641 97 383 4.65e-19 90.1
MS.gene008990.t1 MTR_0250s0040 36.306 157 87 3 463 618 88 232 7.32e-19 87.4
MS.gene008990.t1 MTR_2g104490 28.959 221 120 6 397 610 81 271 1.00e-18 87.8
MS.gene008990.t1 MTR_2g104490 28.959 221 120 6 397 610 81 271 1.15e-18 87.4
MS.gene008990.t1 MTR_0246s0020 30.918 207 120 5 449 645 190 383 1.19e-18 89.0
MS.gene008990.t1 MTR_4g009540 29.437 231 136 6 382 610 89 294 1.78e-18 87.0
MS.gene008990.t1 MTR_4g009540 29.437 231 136 6 382 610 89 294 3.26e-18 86.7
MS.gene008990.t1 MTR_4g009110 27.848 237 136 5 382 610 104 313 3.69e-18 87.0
MS.gene008990.t1 MTR_4g057270 33.951 162 92 6 467 625 153 302 4.70e-18 86.3
MS.gene008990.t1 MTR_0246s0020 32.515 163 96 3 449 610 190 339 8.37e-18 86.3
MS.gene008990.t1 MTR_0011s0260 35.333 150 82 4 463 610 183 319 1.37e-17 85.5
MS.gene008990.t1 MTR_0011s0210 34.667 150 83 4 463 610 183 319 2.03e-17 84.7
MS.gene008990.t1 MTR_2g010450 31.429 175 109 3 435 609 150 313 2.87e-17 84.3
MS.gene008990.t1 MTR_3g104100 31.333 150 102 1 467 616 199 347 7.77e-17 83.2
MS.gene008990.t1 MTR_4g066460 28.431 204 106 4 410 610 122 288 1.06e-16 82.0
MS.gene008990.t1 MTR_3g030700 31.928 166 107 2 451 616 184 343 1.09e-16 82.8
MS.gene008990.t1 MTR_4g092700 31.579 152 87 2 461 609 156 293 1.31e-16 82.0
MS.gene008990.t1 MTR_2g104550 26.977 215 135 5 397 610 82 275 2.91e-16 80.5
MS.gene008990.t1 MTR_6g047570 35.526 152 79 4 463 610 159 295 3.15e-16 80.9
MS.gene008990.t1 MTR_3g498695 34.615 156 97 3 461 614 296 448 5.19e-16 81.6
MS.gene008990.t1 MTR_3g498695 34.615 156 97 3 461 614 296 448 5.59e-16 81.6
MS.gene008990.t1 MTR_5g014520 30.909 165 101 3 446 610 142 293 1.02e-15 79.3
MS.gene008990.t1 MTR_4g066380 29.064 203 105 4 410 610 120 285 1.28e-15 79.0
MS.gene008990.t1 MTR_4g097950 32.203 177 79 4 439 586 25 189 1.52e-15 77.4
MS.gene008990.t1 MTR_2g038040 34.161 161 82 4 464 611 53 202 1.73e-15 77.0
MS.gene008990.t1 MTR_2g084280 30.247 162 94 5 467 625 137 282 5.06e-15 77.0
MS.gene008990.t1 MTR_8g064700 32.911 158 93 5 468 619 249 399 7.85e-15 77.4
MS.gene008990.t1 MTR_8g009020 29.480 173 102 4 447 610 125 286 9.41e-15 76.3
MS.gene008990.t1 MTR_5g014560 28.646 192 124 4 424 615 94 272 1.53e-14 75.5
MS.gene008990.t1 MTR_1g112680 31.928 166 88 6 467 611 321 482 1.58e-14 77.0
MS.gene008990.t1 MTR_8g098275 29.651 172 103 6 69 231 19 181 5.65e-14 75.5
MS.gene008990.t1 MTR_8g098275 28.221 163 102 3 459 606 397 559 1.73e-12 70.9
MS.gene008990.t1 MTR_2g081040 28.333 180 126 2 467 644 181 359 7.01e-14 73.9
MS.gene008990.t1 MTR_7g083900 32.716 162 102 3 461 618 284 442 1.78e-13 73.6
MS.gene008990.t1 MTR_5g014600 45.833 72 39 0 445 516 131 202 1.83e-13 72.4
MS.gene008990.t1 MTR_7g083900 32.716 162 102 3 461 618 284 442 1.89e-13 73.6
MS.gene008990.t1 MTR_6g047550 39.062 128 59 4 389 516 118 226 1.01e-12 69.3
MS.gene008990.t1 MTR_0246s0050 30.769 143 81 3 463 605 151 275 1.07e-12 70.1
MS.gene008990.t1 MTR_4g097940 31.056 161 92 5 451 610 147 289 1.12e-12 70.1
MS.gene008990.t1 MTR_4g098035 30.769 143 81 3 463 605 172 296 1.23e-12 70.1
MS.gene008990.t1 MTR_8g098275 28.221 163 102 3 459 606 304 466 2.06e-12 70.5
MS.gene008990.t1 MTR_8g098275 28.221 163 102 3 459 606 240 402 2.14e-12 70.1
MS.gene008990.t1 MTR_4g097920 29.775 178 95 6 440 610 130 284 2.30e-12 68.9
MS.gene008990.t1 MTR_4g097920 29.775 178 95 6 440 610 115 269 2.35e-12 68.9
MS.gene008990.t1 MTR_5g064950 25.688 218 138 8 436 635 70 281 7.51e-12 67.0
MS.gene008990.t1 MTR_2g104560 28.000 150 89 3 464 610 55 188 1.28e-11 65.5
MS.gene008990.t1 MTR_8g069740 26.543 162 104 5 452 610 102 251 2.52e-11 65.1
MS.gene008990.t1 MTR_8g066770 28.070 171 120 2 462 629 114 284 4.93e-11 64.7
MS.gene008990.t1 MTR_5g064950 25.000 196 125 7 436 615 70 259 6.91e-11 64.3
MS.gene008990.t1 MTR_1g028470 23.894 226 139 6 430 626 53 274 7.93e-11 63.9
MS.gene008990.t1 MTR_2g022280 26.486 185 114 6 462 633 1 176 9.91e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene008990.t1 AT1G32640 50.449 668 250 18 3 644 11 623 0.0 574
MS.gene008990.t1 AT4G17880 47.193 659 241 18 3 646 22 588 0.0 532
MS.gene008990.t1 AT5G46760 47.014 653 255 17 6 645 16 590 1.51e-168 494
MS.gene008990.t1 AT5G46830 57.592 191 66 4 454 643 334 510 1.09e-56 200
MS.gene008990.t1 AT5G46830 32.474 388 169 9 6 377 5 315 9.62e-43 162
MS.gene008990.t1 AT1G01260 38.577 267 111 6 374 640 362 575 2.63e-40 156
MS.gene008990.t1 AT1G01260 38.144 194 106 8 52 234 46 236 2.88e-25 111
MS.gene008990.t1 AT1G01260 38.577 267 111 6 374 640 362 575 2.63e-40 156
MS.gene008990.t1 AT1G01260 38.144 194 106 8 52 234 46 236 2.88e-25 111
MS.gene008990.t1 AT1G01260 38.577 267 111 6 374 640 362 575 2.63e-40 156
MS.gene008990.t1 AT1G01260 38.144 194 106 8 52 234 46 236 2.88e-25 111
MS.gene008990.t1 AT2G46510 42.564 195 81 3 445 637 377 542 1.77e-39 153
MS.gene008990.t1 AT2G46510 33.493 209 118 9 44 234 34 239 6.13e-21 97.4
MS.gene008990.t1 AT4G16430 40.909 176 68 4 445 619 302 442 2.55e-33 134
MS.gene008990.t1 AT4G16430 27.679 224 136 6 19 234 21 226 1.38e-16 83.2
MS.gene008990.t1 AT4G00870 45.333 150 74 2 462 611 248 389 1.55e-30 125
MS.gene008990.t1 AT4G00870 28.283 198 111 5 53 245 34 205 1.05e-16 83.6
MS.gene008990.t1 AT4G09820 34.343 198 114 7 58 245 20 211 5.65e-22 100
MS.gene008990.t1 AT4G09820 32.051 156 74 3 460 615 360 483 4.00e-16 82.0
MS.gene008990.t1 AT5G57150 32.402 179 115 3 464 640 56 230 7.97e-21 93.2
MS.gene008990.t1 AT5G57150 38.194 144 83 3 464 605 56 195 1.82e-20 91.3
MS.gene008990.t1 AT5G57150 38.194 144 83 3 464 605 56 195 1.91e-20 90.9
MS.gene008990.t1 AT5G57150 38.194 144 83 3 464 605 55 194 2.02e-20 90.9
MS.gene008990.t1 AT5G57150 38.194 144 83 3 464 605 55 194 3.54e-20 90.9
MS.gene008990.t1 AT4G37850 34.254 181 95 6 441 610 123 290 1.52e-19 90.9
MS.gene008990.t1 AT4G37850 34.254 181 95 6 441 610 123 290 1.52e-19 90.9
MS.gene008990.t1 AT1G63650 33.516 182 100 6 69 234 26 202 9.50e-18 87.8
MS.gene008990.t1 AT1G63650 27.976 168 112 4 459 618 401 567 2.16e-14 77.0
MS.gene008990.t1 AT1G63650 33.516 182 100 6 69 234 26 202 9.50e-18 87.8
MS.gene008990.t1 AT1G63650 27.976 168 112 4 459 618 401 567 2.16e-14 77.0
MS.gene008990.t1 AT1G63650 33.516 182 100 6 69 234 26 202 9.50e-18 87.8
MS.gene008990.t1 AT1G63650 27.976 168 112 4 459 618 401 567 2.16e-14 77.0
MS.gene008990.t1 AT3G26744 32.367 207 125 6 420 618 262 461 2.29e-17 85.9
MS.gene008990.t1 AT3G26744 32.367 207 125 6 420 618 262 461 2.77e-17 85.9
MS.gene008990.t1 AT3G26744 32.367 207 125 6 420 618 262 461 2.77e-17 85.9
MS.gene008990.t1 AT3G26744 32.367 207 125 6 420 618 262 461 2.77e-17 85.9
MS.gene008990.t1 AT2G28160 36.765 136 75 4 467 601 135 260 3.62e-17 83.6
MS.gene008990.t1 AT2G28160 36.765 136 75 4 467 601 135 260 4.02e-17 83.2
MS.gene008990.t1 AT3G24140 28.571 210 127 6 445 633 177 384 9.48e-17 83.6
MS.gene008990.t1 AT3G24140 28.571 210 127 6 445 633 177 384 1.11e-16 83.2
MS.gene008990.t1 AT4G29930 32.500 160 82 4 447 605 43 177 1.27e-16 80.1
MS.gene008990.t1 AT4G29930 32.500 160 82 4 447 605 43 177 2.56e-16 79.0
MS.gene008990.t1 AT4G29930 32.298 161 84 4 447 605 43 180 3.64e-16 78.6
MS.gene008990.t1 AT1G12860 33.333 168 87 4 461 618 265 417 6.08e-16 80.9
MS.gene008990.t1 AT1G12860 33.333 168 87 4 461 618 265 417 8.21e-16 80.9
MS.gene008990.t1 AT2G22750 29.577 213 131 4 407 610 93 295 1.83e-15 78.6
MS.gene008990.t1 AT2G22750 29.577 213 131 4 407 610 93 295 1.84e-15 78.6
MS.gene008990.t1 AT4G29930 34.641 153 88 4 464 605 55 206 1.92e-15 77.4
MS.gene008990.t1 AT4G29930 34.641 153 88 4 464 605 55 206 1.92e-15 77.4
MS.gene008990.t1 AT2G22750 29.577 213 131 4 407 610 89 291 2.33e-15 78.2
MS.gene008990.t1 AT2G22750 29.577 213 131 4 407 610 65 267 2.61e-15 77.8
MS.gene008990.t1 AT4G29930 32.941 170 97 5 447 605 43 206 2.92e-15 76.6
MS.gene008990.t1 AT2G22750 29.577 213 131 4 407 610 65 267 3.00e-15 77.4
MS.gene008990.t1 AT4G00480 29.348 184 104 6 69 231 36 214 3.36e-14 76.3
MS.gene008990.t1 AT4G00480 27.523 218 130 7 35 231 4 214 4.41e-14 75.9
MS.gene008990.t1 AT4G00480 29.348 184 104 6 69 231 36 214 5.75e-14 75.5
MS.gene008990.t1 AT5G41315 27.957 186 108 5 69 234 35 214 6.49e-14 75.5
MS.gene008990.t1 AT5G41315 26.857 175 114 4 457 618 443 616 6.72e-14 75.5
MS.gene008990.t1 AT5G41315 27.957 186 108 5 69 234 27 206 6.77e-14 75.5
MS.gene008990.t1 AT5G41315 26.857 175 114 4 457 618 435 608 7.07e-14 75.5
MS.gene008990.t1 AT5G41315 27.957 186 108 5 69 234 32 211 6.87e-14 75.5
MS.gene008990.t1 AT5G41315 26.857 175 114 4 457 618 440 613 7.63e-14 75.5
MS.gene008990.t1 AT4G29930 54.237 59 27 0 465 523 56 114 1.43e-13 70.1
MS.gene008990.t1 AT2G16910 30.818 159 93 4 467 611 318 473 7.07e-13 72.0
MS.gene008990.t1 AT2G22760 32.143 168 84 5 452 610 112 258 1.06e-12 69.7
MS.gene008990.t1 AT2G22760 32.143 168 84 5 452 610 112 258 1.55e-12 69.3
MS.gene008990.t1 AT1G10610 33.333 144 85 5 464 605 168 302 2.67e-12 68.9
MS.gene008990.t1 AT5G10570 28.718 195 112 5 436 630 126 293 2.80e-12 68.6
MS.gene008990.t1 AT1G10610 33.333 144 85 5 464 605 235 369 3.71e-12 69.3
MS.gene008990.t1 AT1G10610 33.333 144 85 5 464 605 265 399 4.34e-12 69.3
MS.gene008990.t1 AT2G22770 27.660 188 114 4 457 629 123 303 1.01e-11 67.0

Find 160 sgRNAs with CRISPR-Local

Find 174 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGCGTAGAGCGTAGAATTTC+TGG 0.101182 8.2:+35452087 None:intergenic
CAGCGATGCTTTGTCCATTT+TGG 0.142541 8.2:+35452046 None:intergenic
TCCTTGTGCATCACCAATTT+TGG 0.145524 8.2:+35451593 None:intergenic
TCTCTTCTTTCTTCCAAAAT+TGG 0.173669 8.2:-35451606 MS.gene008990:CDS
CTTCGATGAGCTTGTTCTTC+TGG 0.206409 8.2:+35453187 None:intergenic
GAGCTTAATACGTTGATTTC+AGG 0.216229 8.2:-35453151 MS.gene008990:CDS
GGATATTGAAGTGAAGATTA+TGG 0.243770 8.2:-35451814 MS.gene008990:CDS
CTCAGAATCTCCCCGGATTC+TGG 0.249063 8.2:+35452482 None:intergenic
TGGCTACACCGCTGCTCGGC+TGG 0.254416 8.2:-35453267 MS.gene008990:CDS
CCTCCGACCTCTCTAATTTC+TGG 0.263738 8.2:-35453462 MS.gene008990:CDS
GGTTCCAAATGTTTCCAAAA+TGG 0.283532 8.2:-35452060 MS.gene008990:CDS
TCCATCGTCAATGCTGCTTC+TGG 0.290947 8.2:+35452349 None:intergenic
AGCGGCCACGAACCTGTTTC+AGG 0.306804 8.2:+35452800 None:intergenic
CAAACAATATGAATAACATT+TGG 0.318173 8.2:-35453522 None:intergenic
GGCTACACCGCTGCTCGGCT+GGG 0.333611 8.2:-35453266 MS.gene008990:CDS
TGCAGAAATGGTTGCGTTCA+TGG 0.335709 8.2:+35452664 None:intergenic
TCCATACAACGCTGATCTAA+TGG 0.343232 8.2:-35452855 MS.gene008990:CDS
CCGCTGCTCGGCTGGGGTGA+TGG 0.351635 8.2:-35453259 MS.gene008990:CDS
GGTGAATTGGAGAAACAATT+AGG 0.352788 8.2:-35451957 MS.gene008990:CDS
CTCTTCTAAGTTAATTGACT+TGG 0.357805 8.2:-35451835 MS.gene008990:CDS
AGTTCTTATATCACCGGAAA+TGG 0.362072 8.2:-35452440 MS.gene008990:CDS
GGTCAGTCACAGTTCGTTGC+CGG 0.380141 8.2:-35452404 MS.gene008990:CDS
GCCCGTGAAGCACGGGTCCA+TGG 0.380533 8.2:-35452947 MS.gene008990:CDS
CGTTTCTTCGGTCGCTTCCC+TGG 0.384757 8.2:+35452188 None:intergenic
TCCATTAGATCAGCGTTGTA+TGG 0.386007 8.2:+35452854 None:intergenic
AGTAGCAGGGTGGTTGAGCC+AGG 0.388458 8.2:-35452206 MS.gene008990:CDS
AATTTCAACAATCCTGAAAC+AGG 0.392528 8.2:-35452812 MS.gene008990:CDS
GGAATGCTTTCGTTTACTTC+CGG 0.395195 8.2:-35452329 MS.gene008990:CDS
CCCATGGACCCGTGCTTCAC+GGG 0.396142 8.2:+35452946 None:intergenic
AGAAAAGAAAGTTCCATTTC+CGG 0.399215 8.2:+35452427 None:intergenic
TGAAGGAAGGAGAGAGTAGC+AGG 0.399337 8.2:-35452220 MS.gene008990:CDS
CGTCTTCAAGCTCTGATTGA+AGG 0.400185 8.2:-35453346 MS.gene008990:CDS
AAACAATATGAATAACATTT+GGG 0.401501 8.2:-35453521 None:intergenic
ATCGTTCTCGCTCGTTGTAA+TGG 0.403129 8.2:+35452772 None:intergenic
GATATTGAAGTGAAGATTAT+GGG 0.406522 8.2:-35451813 MS.gene008990:CDS
TGGTGTTTCCGTTAGAGTAC+TGG 0.408218 8.2:+35452595 None:intergenic
TACTAATTCTGTCTGTGAAC+GGG 0.410519 8.2:-35452969 MS.gene008990:CDS
TCCGGGGAGATTCTGAGTTT+CGG 0.416724 8.2:-35452476 MS.gene008990:CDS
TCATTACCGTTTGAAACAAA+TGG 0.429184 8.2:-35452623 MS.gene008990:CDS
GGAATCGTCTAAAGGTGAAT+TGG 0.437083 8.2:-35451970 MS.gene008990:CDS
GTTGAACCATTTGTTTCAAA+CGG 0.440221 8.2:+35452617 None:intergenic
ACCCATGGACCCGTGCTTCA+CGG 0.442980 8.2:+35452945 None:intergenic
GATTGTTGCATTTGCAGAAA+TGG 0.449234 8.2:+35452652 None:intergenic
CGAGGTAGAAAACCGGCTAA+TGG 0.451911 8.2:-35452167 MS.gene008990:CDS
TCAATGCTGCTTCTGGATAC+AGG 0.460912 8.2:+35452356 None:intergenic
GGTTCAATGAAACCAGAATC+CGG 0.461046 8.2:-35452494 MS.gene008990:CDS
TGGGTTGGGATGCTATGGTT+AGG 0.463969 8.2:-35451794 MS.gene008990:CDS
AGAACGATCCTTCATCTGTC+TGG 0.464418 8.2:-35452757 MS.gene008990:CDS
TCATCCTGCGGCGAAGTTGA+TGG 0.465184 8.2:-35451751 MS.gene008990:CDS
AGGTACGGTGGCGATGTTAA+CGG 0.467632 8.2:+35452688 None:intergenic
CCCGTGAAGCACGGGTCCAT+GGG 0.472068 8.2:-35452946 MS.gene008990:CDS
TCAGCCCCGGTGATCCACAC+GGG 0.482951 8.2:+35452998 None:intergenic
TGAAGTGAAGATTATGGGTT+GGG 0.485063 8.2:-35451808 MS.gene008990:CDS
TGTGGATCACCGGGGCTGAA+AGG 0.486911 8.2:-35452994 MS.gene008990:CDS
GGTTCTTCTCTTCCATTAGC+CGG 0.494454 8.2:+35452155 None:intergenic
TCTCTCCGCCTCTGCAGCTA+TGG 0.499397 8.2:-35452726 MS.gene008990:CDS
GTGAACGGGCCCGTGAAGCA+CGG 0.499419 8.2:-35452955 MS.gene008990:CDS
GCTACACCGCTGCTCGGCTG+GGG 0.501207 8.2:-35453265 MS.gene008990:CDS
TCAAGCAGCCGAGGTGGAGG+CGG 0.502710 8.2:-35452278 MS.gene008990:CDS
TTGAAGGCGCGAAAGAAAGC+TGG 0.503041 8.2:-35453330 MS.gene008990:CDS
GCCGCCATCAACTTCGCCGC+AGG 0.505374 8.2:+35451747 None:intergenic
ATTAGTAAGCCTTTCAGCCC+CGG 0.505431 8.2:+35452985 None:intergenic
CGATGAGCTTGTTCTTCTGG+AGG 0.507325 8.2:+35453190 None:intergenic
GGTCCATGGGTTTCAGACCT+TGG 0.507823 8.2:-35452933 MS.gene008990:CDS
GAAATCGAAGCTACAAGGGC+TGG 0.510964 8.2:-35451991 MS.gene008990:CDS
TCAACAAGCTTCTGTTAACA+TGG 0.511118 8.2:-35451661 MS.gene008990:CDS
TGTTGTGATGGAGGAGGCAC+TGG 0.512388 8.2:+35453400 None:intergenic
GCCGAGCAGCGGTGTAGCCA+TGG 0.518239 8.2:+35453270 None:intergenic
AAGAAAAGTTCTTATATCAC+CGG 0.523073 8.2:-35452446 MS.gene008990:CDS
CAATCCTTTGTCAACGGCAC+CGG 0.524318 8.2:-35453052 MS.gene008990:CDS
TTGAAGTGAAGATTATGGGT+TGG 0.525361 8.2:-35451809 MS.gene008990:CDS
GAAATGGTTGCGTTCATGGC+AGG 0.525493 8.2:+35452668 None:intergenic
TGAACGGGCCCGTGAAGCAC+GGG 0.527585 8.2:-35452954 MS.gene008990:CDS
AAATCAAGCAGCCGAGGTGG+AGG 0.534413 8.2:-35452281 MS.gene008990:CDS
TCCAAAATTGGTGATGCACA+AGG 0.537190 8.2:-35451594 MS.gene008990:CDS
ACAATTAGGTGCAACAAAGA+AGG 0.539042 8.2:-35451943 MS.gene008990:CDS
CAGCCCCGGTGATCCACACG+GGG 0.540800 8.2:+35452999 None:intergenic
TCATTGAGCCAGACAGATGA+AGG 0.541127 8.2:+35452749 None:intergenic
GTTCAATGAAACCAGAATCC+GGG 0.541459 8.2:-35452493 MS.gene008990:CDS
CTTGATTTCATATTTGAAGA+CGG 0.542319 8.2:+35452296 None:intergenic
GATTATGGGTTGGGATGCTA+TGG 0.545468 8.2:-35451799 MS.gene008990:CDS
TTCAGCCCCGGTGATCCACA+CGG 0.545674 8.2:+35452997 None:intergenic
AATTCCATTAGATAAAGAAA+AGG 0.545738 8.2:-35451880 MS.gene008990:CDS
CAAGGGCTGGAATCGTCTAA+AGG 0.545942 8.2:-35451978 MS.gene008990:CDS
TCTAGATGTTTCTGCTGTGA+AGG 0.546467 8.2:-35452237 MS.gene008990:CDS
ATTTCTGCAAATGCAACAAT+CGG 0.548088 8.2:-35452650 MS.gene008990:CDS
GGGGTGATGGATATTACAAA+GGG 0.549464 8.2:-35453246 MS.gene008990:CDS
ATAAGCCTGGCTGAGTGATC+CGG 0.550752 8.2:+35453033 None:intergenic
CTTAATACGTTGATTTCAGG+TGG 0.552157 8.2:-35453148 MS.gene008990:CDS
GAATTGAAATCGAAGCTACA+AGG 0.554225 8.2:-35451996 MS.gene008990:CDS
ACCGAAACTCAGAATCTCCC+CGG 0.557140 8.2:+35452475 None:intergenic
ACCATGGCTACACCGCTGCT+CGG 0.557176 8.2:-35453271 MS.gene008990:CDS
AGCCATGGTGTAATCATAAG+AGG 0.557540 8.2:+35453285 None:intergenic
GGTTGCGTTCATGGCAGGTA+CGG 0.559424 8.2:+35452673 None:intergenic
TTACTAATTCTGTCTGTGAA+CGG 0.561586 8.2:-35452970 MS.gene008990:CDS
GATGTTTCTGCTGTGAAGGA+AGG 0.568459 8.2:-35452233 MS.gene008990:CDS
GAAATTAGAGAGGTCGGAGG+TGG 0.568481 8.2:+35453465 None:intergenic
TGAGCAAAGTTAACTGCAGT+TGG 0.569736 8.2:+35452575 None:intergenic
ATGGACAAAGCATCGCTGCT+AGG 0.569855 8.2:-35452041 MS.gene008990:CDS
GAAGTTGCGGAATGTGGTGT+TGG 0.570968 8.2:+35453436 None:intergenic
GAAGAAACGAGGTAGAAAAC+CGG 0.575492 8.2:-35452174 MS.gene008990:CDS
CGGCACCGGATCACTCAGCC+AGG 0.579079 8.2:-35453038 MS.gene008990:CDS
GTTGTTGAAGTTGCGGAATG+TGG 0.580780 8.2:+35453430 None:intergenic
GGACGACAACTCCTCCGTCA+TGG 0.585254 8.2:-35453500 MS.gene008990:CDS
ACAATCCTGAAACAGGTTCG+TGG 0.586854 8.2:-35452805 MS.gene008990:CDS
GGGTTGAATTGAAATAAGCC+TGG 0.588534 8.2:+35453020 None:intergenic
AAGCCAGAAATTAGAGAGGT+CGG 0.590490 8.2:+35453459 None:intergenic
CCATCACCCCAGCCGAGCAG+CGG 0.593117 8.2:+35453259 None:intergenic
TCGAATTTCCATAGCTGCAG+AGG 0.593973 8.2:+35452718 None:intergenic
GTATACCAACGTCTTCAAGC+GGG 0.595425 8.2:-35452907 MS.gene008990:CDS
TGATCCGGTGCCGTTGACAA+AGG 0.596939 8.2:+35453048 None:intergenic
TGCGTTCATGGCAGGTACGG+TGG 0.599268 8.2:+35452676 None:intergenic
GTCGGTGACATCTTCCTCAA+CGG 0.604811 8.2:+35453105 None:intergenic
TGTCTCAGATGATGCCGTTG+AGG 0.605605 8.2:-35453119 MS.gene008990:CDS
ATTCTACGCTCTACGCGCTG+TGG 0.607114 8.2:-35452081 MS.gene008990:CDS
AATTTCCATAGCTGCAGAGG+CGG 0.609907 8.2:+35452721 None:intergenic
ATGAAATCAAGCAGCCGAGG+TGG 0.610118 8.2:-35452284 MS.gene008990:CDS
GGCGTTGAAAGACTTAGACT+TGG 0.610935 8.2:-35451727 MS.gene008990:CDS
CAACAAGCTTCTGTTAACAT+GGG 0.613453 8.2:-35451660 MS.gene008990:CDS
GTAGCAGGGTGGTTGAGCCA+GGG 0.614057 8.2:-35452205 MS.gene008990:CDS
TGGTGCAGTTGTTGAAGTTG+CGG 0.614269 8.2:+35453423 None:intergenic
TGGTTCAACCAGTACTCTAA+CGG 0.614412 8.2:-35452603 MS.gene008990:CDS
AAATCAACGTATTAAGCTCA+CGG 0.614664 8.2:+35453155 None:intergenic
CTTCAATCAGAGCTTGAAGA+CGG 0.614935 8.2:+35453347 None:intergenic
TCTGCTTCTACATGATTCAA+CGG 0.616515 8.2:+35452134 None:intergenic
TGTGATGGAGGAGGCACTGG+TGG 0.617060 8.2:+35453403 None:intergenic
CAGAATCTCCGCCTCCACCT+CGG 0.617972 8.2:+35452270 None:intergenic
AACATAGACTGTTGTGATGG+AGG 0.624047 8.2:+35453391 None:intergenic
TTGAACATAGACTGTTGTGA+TGG 0.627469 8.2:+35453388 None:intergenic
ATGACTCAATCCTTTGTCAA+CGG 0.630282 8.2:-35453058 MS.gene008990:CDS
GGAAGGAGAGAGTAGCAGGG+TGG 0.637372 8.2:-35452216 MS.gene008990:CDS
TCCTGCGGCGAAGTTGATGG+CGG 0.639474 8.2:-35451748 MS.gene008990:CDS
TCCAGAAGCAGCATTGACGA+TGG 0.640563 8.2:-35452350 MS.gene008990:CDS
TGGGGTGATGGATATTACAA+AGG 0.644784 8.2:-35453247 MS.gene008990:CDS
TGTATACCAACGTCTTCAAG+CGG 0.647168 8.2:-35452908 MS.gene008990:CDS
ATACCAAGGTCTGAAACCCA+TGG 0.647395 8.2:+35452930 None:intergenic
TTCAATGAAACCAGAATCCG+GGG 0.651102 8.2:-35452492 MS.gene008990:CDS
ACCACCCCGCTTGAAGACGT+TGG 0.653527 8.2:+35452902 None:intergenic
GGGAAGCGACCGAAGAAACG+AGG 0.656232 8.2:-35452185 MS.gene008990:CDS
ATAGACTGTTGTGATGGAGG+AGG 0.660918 8.2:+35453394 None:intergenic
GGTCATGAAAGCTTCCATGA+CGG 0.664445 8.2:+35453486 None:intergenic
TATACCAACGTCTTCAAGCG+GGG 0.672915 8.2:-35452906 MS.gene008990:CDS
CTCGTTGTAATGGAATTCAG+CGG 0.673669 8.2:+35452782 None:intergenic
TACAAAGGGGAAGATGACAA+AGG 0.675098 8.2:-35453232 MS.gene008990:CDS
AAGATGTCACCGACACTGAG+TGG 0.679436 8.2:-35453096 MS.gene008990:CDS
CATGAAAGCTTCCATGACGG+AGG 0.681601 8.2:+35453489 None:intergenic
CCAGAAATTAGAGAGGTCGG+AGG 0.681653 8.2:+35453462 None:intergenic
GAAGGAAGGAGAGAGTAGCA+GGG 0.683186 8.2:-35452219 MS.gene008990:CDS
AATTGAAATCGAAGCTACAA+GGG 0.684780 8.2:-35451995 MS.gene008990:CDS
AGACGTTGGTATACATACCA+AGG 0.685367 8.2:+35452916 None:intergenic
AATATGAAATCAAGCAGCCG+AGG 0.686490 8.2:-35452287 MS.gene008990:CDS
GGATTGCCAGAAAATCGCGT+AGG 0.687237 8.2:+35453306 None:intergenic
TGAAGACGGTAAGACTACAC+CGG 0.689623 8.2:+35452310 None:intergenic
ATCCTCTTATGATTACACCA+TGG 0.705200 8.2:-35453287 MS.gene008990:CDS
ACCAACGTCTTCAAGCGGGG+TGG 0.708219 8.2:-35452903 MS.gene008990:CDS
TTGGAAGCCAGAAATTAGAG+AGG 0.708961 8.2:+35453455 None:intergenic
CAGCAAGAAGAATCATCCTG+CGG 0.713584 8.2:-35451763 MS.gene008990:CDS
AGCCCCGGTGATCCACACGG+GGG 0.737376 8.2:+35453000 None:intergenic
TACGGTGGCGATGTTAACGG+TGG 0.745585 8.2:+35452691 None:intergenic
GGGTGATGGATATTACAAAG+GGG 0.787460 8.2:-35453245 MS.gene008990:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTCCATTAGATAAAGAAA+AGG - chr8.2:35453221-35453240 MS.gene008990:CDS 20.0%
!!! TTTTCTTTATCTAATGGAAT+TGG + chr8.2:35453222-35453241 None:intergenic 20.0%
! AAGAAAAGTTCTTATATCAC+CGG - chr8.2:35452655-35452674 MS.gene008990:CDS 25.0%
! CTTGATTTCATATTTGAAGA+CGG + chr8.2:35452808-35452827 None:intergenic 25.0%
! GATATTGAAGTGAAGATTAT+GGG - chr8.2:35453288-35453307 MS.gene008990:CDS 25.0%
!! TTCTCCTTTTCTTTATCTAA+TGG + chr8.2:35453228-35453247 None:intergenic 25.0%
AAATCAACGTATTAAGCTCA+CGG + chr8.2:35451949-35451968 None:intergenic 30.0%
AATTGAAATCGAAGCTACAA+GGG - chr8.2:35453106-35453125 MS.gene008990:CDS 30.0%
AATTTCAACAATCCTGAAAC+AGG - chr8.2:35452289-35452308 MS.gene008990:CDS 30.0%
AGAAAAGAAAGTTCCATTTC+CGG + chr8.2:35452677-35452696 None:intergenic 30.0%
ATTTCTGCAAATGCAACAAT+CGG - chr8.2:35452451-35452470 MS.gene008990:CDS 30.0%
CTCTTCTAAGTTAATTGACT+TGG - chr8.2:35453266-35453285 MS.gene008990:CDS 30.0%
GGATATTGAAGTGAAGATTA+TGG - chr8.2:35453287-35453306 MS.gene008990:CDS 30.0%
GTTGAACCATTTGTTTCAAA+CGG + chr8.2:35452487-35452506 None:intergenic 30.0%
TCTCTTCTTTCTTCCAAAAT+TGG - chr8.2:35453495-35453514 MS.gene008990:CDS 30.0%
TTACTAATTCTGTCTGTGAA+CGG - chr8.2:35452131-35452150 MS.gene008990:CDS 30.0%
! TCATTACCGTTTGAAACAAA+TGG - chr8.2:35452478-35452497 MS.gene008990:CDS 30.0%
! TCTTTTTCTGTTTTCTTCAC+CGG + chr8.2:35452719-35452738 None:intergenic 30.0%
!! TTGTCCATTTTGGAAACATT+TGG + chr8.2:35453048-35453067 None:intergenic 30.0%
ACAATTAGGTGCAACAAAGA+AGG - chr8.2:35453158-35453177 MS.gene008990:CDS 35.0%
AGTTCTTATATCACCGGAAA+TGG - chr8.2:35452661-35452680 MS.gene008990:CDS 35.0%
ATCCTCTTATGATTACACCA+TGG - chr8.2:35451814-35451833 MS.gene008990:CDS 35.0%
ATGACTCAATCCTTTGTCAA+CGG - chr8.2:35452043-35452062 MS.gene008990:CDS 35.0%
CAACAAGCTTCTGTTAACAT+GGG - chr8.2:35453441-35453460 MS.gene008990:CDS 35.0%
GAATTGAAATCGAAGCTACA+AGG - chr8.2:35453105-35453124 MS.gene008990:CDS 35.0%
GATTGTTGCATTTGCAGAAA+TGG + chr8.2:35452452-35452471 None:intergenic 35.0%
GGTGAATTGGAGAAACAATT+AGG - chr8.2:35453144-35453163 MS.gene008990:CDS 35.0%
GGTTCCAAATGTTTCCAAAA+TGG - chr8.2:35453041-35453060 MS.gene008990:CDS 35.0%
TACTAATTCTGTCTGTGAAC+GGG - chr8.2:35452132-35452151 MS.gene008990:CDS 35.0%
TCAACAAGCTTCTGTTAACA+TGG - chr8.2:35453440-35453459 MS.gene008990:CDS 35.0%
TCTGCTTCTACATGATTCAA+CGG + chr8.2:35452970-35452989 None:intergenic 35.0%
TGAAGTGAAGATTATGGGTT+GGG - chr8.2:35453293-35453312 MS.gene008990:CDS 35.0%
TTGAACATAGACTGTTGTGA+TGG + chr8.2:35451716-35451735 None:intergenic 35.0%
TTGAAGTGAAGATTATGGGT+TGG - chr8.2:35453292-35453311 MS.gene008990:CDS 35.0%
! CTGAAGGAACTGAATTTTTC+TGG - chr8.2:35452586-35452605 MS.gene008990:CDS 35.0%
! GGAAATGGAACTTTCTTTTC+TGG - chr8.2:35452676-35452695 MS.gene008990:CDS 35.0%
!! CTTAATACGTTGATTTCAGG+TGG - chr8.2:35451953-35451972 MS.gene008990:CDS 35.0%
!! GAGCTTAATACGTTGATTTC+AGG - chr8.2:35451950-35451969 MS.gene008990:CDS 35.0%
AACATAGACTGTTGTGATGG+AGG + chr8.2:35451713-35451732 None:intergenic 40.0%
AAGCCAGAAATTAGAGAGGT+CGG + chr8.2:35451645-35451664 None:intergenic 40.0%
AATATGAAATCAAGCAGCCG+AGG - chr8.2:35452814-35452833 MS.gene008990:CDS 40.0%
AGACGTTGGTATACATACCA+AGG + chr8.2:35452188-35452207 None:intergenic 40.0%
AGCCATGGTGTAATCATAAG+AGG + chr8.2:35451819-35451838 None:intergenic 40.0%
CTTCAATCAGAGCTTGAAGA+CGG + chr8.2:35451757-35451776 None:intergenic 40.0%
GAAGAAACGAGGTAGAAAAC+CGG - chr8.2:35452927-35452946 MS.gene008990:CDS 40.0%
GAGAAAAAACCACTCAGTGT+CGG + chr8.2:35452017-35452036 None:intergenic 40.0%
GGAATCGTCTAAAGGTGAAT+TGG - chr8.2:35453131-35453150 MS.gene008990:CDS 40.0%
GGAATGCTTTCGTTTACTTC+CGG - chr8.2:35452772-35452791 MS.gene008990:CDS 40.0%
GGGTTGAATTGAAATAAGCC+TGG + chr8.2:35452084-35452103 None:intergenic 40.0%
GGTTCAATGAAACCAGAATC+CGG - chr8.2:35452607-35452626 MS.gene008990:CDS 40.0%
GTTCAATGAAACCAGAATCC+GGG - chr8.2:35452608-35452627 MS.gene008990:CDS 40.0%
GTTCCTTCAGAAAAAAGCTC+TGG + chr8.2:35452576-35452595 None:intergenic 40.0%
TACAAAGGGGAAGATGACAA+AGG - chr8.2:35451869-35451888 MS.gene008990:CDS 40.0%
TCCATACAACGCTGATCTAA+TGG - chr8.2:35452246-35452265 MS.gene008990:CDS 40.0%
TCCATTAGATCAGCGTTGTA+TGG + chr8.2:35452250-35452269 None:intergenic 40.0%
TGAGCAAAGTTAACTGCAGT+TGG + chr8.2:35452529-35452548 None:intergenic 40.0%
TGGTTCAACCAGTACTCTAA+CGG - chr8.2:35452498-35452517 MS.gene008990:CDS 40.0%
TGTATACCAACGTCTTCAAG+CGG - chr8.2:35452193-35452212 MS.gene008990:CDS 40.0%
TTCAATGAAACCAGAATCCG+GGG - chr8.2:35452609-35452628 MS.gene008990:CDS 40.0%
TTGGAAGCCAGAAATTAGAG+AGG + chr8.2:35451649-35451668 None:intergenic 40.0%
! CTCGTTGTAATGGAATTCAG+CGG + chr8.2:35452322-35452341 None:intergenic 40.0%
! GGTTTTCTACCTCGTTTCTT+CGG + chr8.2:35452928-35452947 None:intergenic 40.0%
! TCAGAAAAAAGCTCTGGTTC+TGG + chr8.2:35452570-35452589 None:intergenic 40.0%
! TCCTTGTGCATCACCAATTT+TGG + chr8.2:35453511-35453530 None:intergenic 40.0%
! TCTAGATGTTTCTGCTGTGA+AGG - chr8.2:35452864-35452883 MS.gene008990:CDS 40.0%
!! GGGGTGATGGATATTACAAA+GGG - chr8.2:35451855-35451874 MS.gene008990:CDS 40.0%
!! GGGTGATGGATATTACAAAG+GGG - chr8.2:35451856-35451875 MS.gene008990:CDS 40.0%
!! TCCAAAATTGGTGATGCACA+AGG - chr8.2:35453507-35453526 MS.gene008990:CDS 40.0%
!! TGGGGTGATGGATATTACAA+AGG - chr8.2:35451854-35451873 MS.gene008990:CDS 40.0%
!!! GAACCAGAGCTTTTTTCTGA+AGG - chr8.2:35452570-35452589 MS.gene008990:CDS 40.0%
AATTTCCATAGCTGCAGAGG+CGG + chr8.2:35452383-35452402 None:intergenic 45.0%
ACAATCCTGAAACAGGTTCG+TGG - chr8.2:35452296-35452315 MS.gene008990:CDS 45.0%
AGAACGATCCTTCATCTGTC+TGG - chr8.2:35452344-35452363 MS.gene008990:CDS 45.0%
ATCGTTCTCGCTCGTTGTAA+TGG + chr8.2:35452332-35452351 None:intergenic 45.0%
ATTAGTAAGCCTTTCAGCCC+CGG + chr8.2:35452119-35452138 None:intergenic 45.0%
ATTTCAATTCAACCCCCGTG+TGG - chr8.2:35452089-35452108 MS.gene008990:CDS 45.0%
CAGCAAGAAGAATCATCCTG+CGG - chr8.2:35453338-35453357 MS.gene008990:CDS 45.0%
GGTCATGAAAGCTTCCATGA+CGG + chr8.2:35451618-35451637 None:intergenic 45.0%
GGTTCTTCTCTTCCATTAGC+CGG + chr8.2:35452949-35452968 None:intergenic 45.0%
GTATACCAACGTCTTCAAGC+GGG - chr8.2:35452194-35452213 MS.gene008990:CDS 45.0%
GTTGTTGAAGTTGCGGAATG+TGG + chr8.2:35451674-35451693 None:intergenic 45.0%
TATACCAACGTCTTCAAGCG+GGG - chr8.2:35452195-35452214 MS.gene008990:CDS 45.0%
TCATTGAGCCAGACAGATGA+AGG + chr8.2:35452355-35452374 None:intergenic 45.0%
TCGAATTTCCATAGCTGCAG+AGG + chr8.2:35452386-35452405 None:intergenic 45.0%
TGAAGACGGTAAGACTACAC+CGG + chr8.2:35452794-35452813 None:intergenic 45.0%
TGCAGAAATGGTTGCGTTCA+TGG + chr8.2:35452440-35452459 None:intergenic 45.0%
TGGTGCAGTTGTTGAAGTTG+CGG + chr8.2:35451681-35451700 None:intergenic 45.0%
TGGTGTTTCCGTTAGAGTAC+TGG + chr8.2:35452509-35452528 None:intergenic 45.0%
! ATACCAAGGTCTGAAACCCA+TGG + chr8.2:35452174-35452193 None:intergenic 45.0%
! ATAGACTGTTGTGATGGAGG+AGG + chr8.2:35451710-35451729 None:intergenic 45.0%
! CAGCGATGCTTTGTCCATTT+TGG + chr8.2:35453058-35453077 None:intergenic 45.0%
! CGTCTTCAAGCTCTGATTGA+AGG - chr8.2:35451755-35451774 MS.gene008990:CDS 45.0%
! CTTCGATGAGCTTGTTCTTC+TGG + chr8.2:35451917-35451936 None:intergenic 45.0%
! GATGTTTCTGCTGTGAAGGA+AGG - chr8.2:35452868-35452887 MS.gene008990:CDS 45.0%
! GGCGTTGAAAGACTTAGACT+TGG - chr8.2:35453374-35453393 MS.gene008990:CDS 45.0%
! TCAATGCTGCTTCTGGATAC+AGG + chr8.2:35452748-35452767 None:intergenic 45.0%
!! GATTATGGGTTGGGATGCTA+TGG - chr8.2:35453302-35453321 MS.gene008990:CDS 45.0%
AAGATGTCACCGACACTGAG+TGG - chr8.2:35452005-35452024 MS.gene008990:CDS 50.0%
ACCGAAACTCAGAATCTCCC+CGG + chr8.2:35452629-35452648 None:intergenic 50.0%
AGGTACGGTGGCGATGTTAA+CGG + chr8.2:35452416-35452435 None:intergenic 50.0%
ATAAGCCTGGCTGAGTGATC+CGG + chr8.2:35452071-35452090 None:intergenic 50.0%
ATGAAATCAAGCAGCCGAGG+TGG - chr8.2:35452817-35452836 MS.gene008990:CDS 50.0%
CAAGGGCTGGAATCGTCTAA+AGG - chr8.2:35453123-35453142 MS.gene008990:CDS 50.0%
CAATCCTTTGTCAACGGCAC+CGG - chr8.2:35452049-35452068 MS.gene008990:CDS 50.0%
CATGAAAGCTTCCATGACGG+AGG + chr8.2:35451615-35451634 None:intergenic 50.0%
CCAGAAATTAGAGAGGTCGG+AGG + chr8.2:35451642-35451661 None:intergenic 50.0%
CCTCCGACCTCTCTAATTTC+TGG - chr8.2:35451639-35451658 MS.gene008990:CDS 50.0%
CGAGGTAGAAAACCGGCTAA+TGG - chr8.2:35452934-35452953 MS.gene008990:CDS 50.0%
CGCGTAGAGCGTAGAATTTC+TGG + chr8.2:35453017-35453036 None:intergenic 50.0%
GAAATCGAAGCTACAAGGGC+TGG - chr8.2:35453110-35453129 MS.gene008990:CDS 50.0%
GAAATGGTTGCGTTCATGGC+AGG + chr8.2:35452436-35452455 None:intergenic 50.0%
GAAATTAGAGAGGTCGGAGG+TGG + chr8.2:35451639-35451658 None:intergenic 50.0%
GAAGGAAGGAGAGAGTAGCA+GGG - chr8.2:35452882-35452901 MS.gene008990:CDS 50.0%
GAAGTTGCGGAATGTGGTGT+TGG + chr8.2:35451668-35451687 None:intergenic 50.0%
GGATTGCCAGAAAATCGCGT+AGG + chr8.2:35451798-35451817 None:intergenic 50.0%
GTCGGTGACATCTTCCTCAA+CGG + chr8.2:35451999-35452018 None:intergenic 50.0%
TCCGGGGAGATTCTGAGTTT+CGG - chr8.2:35452625-35452644 MS.gene008990:CDS 50.0%
TGAAGGAAGGAGAGAGTAGC+AGG - chr8.2:35452881-35452900 MS.gene008990:CDS 50.0%
TGTCTCAGATGATGCCGTTG+AGG - chr8.2:35451982-35452001 MS.gene008990:CDS 50.0%
! CGATGAGCTTGTTCTTCTGG+AGG + chr8.2:35451914-35451933 None:intergenic 50.0%
! TCCATCGTCAATGCTGCTTC+TGG + chr8.2:35452755-35452774 None:intergenic 50.0%
! TGGGTTGGGATGCTATGGTT+AGG - chr8.2:35453307-35453326 MS.gene008990:CDS 50.0%
! TTGAAGGCGCGAAAGAAAGC+TGG - chr8.2:35451771-35451790 MS.gene008990:CDS 50.0%
!! ATGGACAAAGCATCGCTGCT+AGG - chr8.2:35453060-35453079 MS.gene008990:CDS 50.0%
!! TCCAGAAGCAGCATTGACGA+TGG - chr8.2:35452751-35452770 MS.gene008990:CDS 50.0%
AAATCAAGCAGCCGAGGTGG+AGG - chr8.2:35452820-35452839 MS.gene008990:CDS 55.0%
ATTCTACGCTCTACGCGCTG+TGG - chr8.2:35453020-35453039 MS.gene008990:CDS 55.0%
CTCAGAATCTCCCCGGATTC+TGG + chr8.2:35452622-35452641 None:intergenic 55.0%
GGTCAGTCACAGTTCGTTGC+CGG - chr8.2:35452697-35452716 MS.gene008990:CDS 55.0%
GGTCCATGGGTTTCAGACCT+TGG - chr8.2:35452168-35452187 MS.gene008990:CDS 55.0%
GGTTGCGTTCATGGCAGGTA+CGG + chr8.2:35452431-35452450 None:intergenic 55.0%
TACGGTGGCGATGTTAACGG+TGG + chr8.2:35452413-35452432 None:intergenic 55.0%
TCATCCTGCGGCGAAGTTGA+TGG - chr8.2:35453350-35453369 MS.gene008990:CDS 55.0%
! GCTGGACCTACGCGATTTTC+TGG - chr8.2:35451789-35451808 MS.gene008990:CDS 55.0%
! TGTTGTGATGGAGGAGGCAC+TGG + chr8.2:35451704-35451723 None:intergenic 55.0%
!! TGATCCGGTGCCGTTGACAA+AGG + chr8.2:35452056-35452075 None:intergenic 55.0%
ACCAACGTCTTCAAGCGGGG+TGG - chr8.2:35452198-35452217 MS.gene008990:CDS 60.0%
ACCACCCCGCTTGAAGACGT+TGG + chr8.2:35452202-35452221 None:intergenic 60.0%
ACCATGGCTACACCGCTGCT+CGG - chr8.2:35451830-35451849 MS.gene008990:CDS 60.0%
ACCCATGGACCCGTGCTTCA+CGG + chr8.2:35452159-35452178 None:intergenic 60.0%
AGCGGCCACGAACCTGTTTC+AGG + chr8.2:35452304-35452323 None:intergenic 60.0%
AGTAGCAGGGTGGTTGAGCC+AGG - chr8.2:35452895-35452914 MS.gene008990:CDS 60.0%
CAGAATCTCCGCCTCCACCT+CGG + chr8.2:35452834-35452853 None:intergenic 60.0%
CGTTTCTTCGGTCGCTTCCC+TGG + chr8.2:35452916-35452935 None:intergenic 60.0%
GGAAGGAGAGAGTAGCAGGG+TGG - chr8.2:35452885-35452904 MS.gene008990:CDS 60.0%
GGACGACAACTCCTCCGTCA+TGG - chr8.2:35451601-35451620 MS.gene008990:CDS 60.0%
GGGAAGCGACCGAAGAAACG+AGG - chr8.2:35452916-35452935 MS.gene008990:CDS 60.0%
GTAGCAGGGTGGTTGAGCCA+GGG - chr8.2:35452896-35452915 MS.gene008990:CDS 60.0%
TCAACCCCCGTGTGGATCAC+CGG - chr8.2:35452097-35452116 MS.gene008990:CDS 60.0%
TCTCTCCGCCTCTGCAGCTA+TGG - chr8.2:35452375-35452394 MS.gene008990:CDS 60.0%
TGCGTTCATGGCAGGTACGG+TGG + chr8.2:35452428-35452447 None:intergenic 60.0%
TGTGGATCACCGGGGCTGAA+AGG - chr8.2:35452107-35452126 MS.gene008990:CDS 60.0%
TTCAGCCCCGGTGATCCACA+CGG + chr8.2:35452107-35452126 None:intergenic 60.0%
!! TCCTGCGGCGAAGTTGATGG+CGG - chr8.2:35453353-35453372 MS.gene008990:CDS 60.0%
!! TGTGATGGAGGAGGCACTGG+TGG + chr8.2:35451701-35451720 None:intergenic 60.0%
AACCCCCGTGTGGATCACCG+GGG - chr8.2:35452099-35452118 MS.gene008990:CDS 65.0%
CAACCCCCGTGTGGATCACC+GGG - chr8.2:35452098-35452117 MS.gene008990:CDS 65.0%
CCCATGGACCCGTGCTTCAC+GGG + chr8.2:35452158-35452177 None:intergenic 65.0%
CCCGTGAAGCACGGGTCCAT+GGG - chr8.2:35452155-35452174 MS.gene008990:CDS 65.0%
GTGAACGGGCCCGTGAAGCA+CGG - chr8.2:35452146-35452165 MS.gene008990:CDS 65.0%
TCAAGCAGCCGAGGTGGAGG+CGG - chr8.2:35452823-35452842 MS.gene008990:CDS 65.0%
TCAGCCCCGGTGATCCACAC+GGG + chr8.2:35452106-35452125 None:intergenic 65.0%
TGAACGGGCCCGTGAAGCAC+GGG - chr8.2:35452147-35452166 MS.gene008990:CDS 65.0%
AGCCCCGGTGATCCACACGG+GGG + chr8.2:35452104-35452123 None:intergenic 70.0%
CAGCCCCGGTGATCCACACG+GGG + chr8.2:35452105-35452124 None:intergenic 70.0%
CCATCACCCCAGCCGAGCAG+CGG + chr8.2:35451845-35451864 None:intergenic 70.0%
GCCCGTGAAGCACGGGTCCA+TGG - chr8.2:35452154-35452173 MS.gene008990:CDS 70.0%
GCCGAGCAGCGGTGTAGCCA+TGG + chr8.2:35451834-35451853 None:intergenic 70.0%
GCCGCCATCAACTTCGCCGC+AGG + chr8.2:35453357-35453376 None:intergenic 70.0%
GCTACACCGCTGCTCGGCTG+GGG - chr8.2:35451836-35451855 MS.gene008990:CDS 70.0%
GGCTACACCGCTGCTCGGCT+GGG - chr8.2:35451835-35451854 MS.gene008990:CDS 70.0%
TGGCTACACCGCTGCTCGGC+TGG - chr8.2:35451834-35451853 MS.gene008990:CDS 70.0%
! CGGCACCGGATCACTCAGCC+AGG - chr8.2:35452063-35452082 MS.gene008990:CDS 70.0%
CCGCTGCTCGGCTGGGGTGA+TGG - chr8.2:35451842-35451861 MS.gene008990:CDS 75.0%


Chromosome Type Strat End Strand Name
chr8.2 gene 35451587 35453536 35451587 ID=MS.gene008990
chr8.2 mRNA 35451587 35453536 35451587 ID=MS.gene008990.t1;Parent=MS.gene008990
chr8.2 exon 35451587 35453536 35451587 ID=MS.gene008990.t1.exon1;Parent=MS.gene008990.t1
chr8.2 CDS 35451587 35453536 35451587 ID=cds.MS.gene008990.t1;Parent=MS.gene008990.t1
Gene Sequence

>MS.gene008990

ATGAATAACATTTGGGACGACAACTCCTCCGTCATGGAAGCTTTCATGACCACCTCCGACCTCTCTAATTTCTGGCTTCCAACACCACATTCCGCAACTTCAACAACTGCACCACCAGTGCCTCCTCCATCACAACAGTCTATGTTCAATCAAGAGACTCTTCAACACCGTCTTCAAGCTCTGATTGAAGGCGCGAAAGAAAGCTGGACCTACGCGATTTTCTGGCAATCCTCTTATGATTACACCATGGCTACACCGCTGCTCGGCTGGGGTGATGGATATTACAAAGGGGAAGATGACAAAGGAAAACTGAAACGAGTCACGCCTCCAGAAGAACAAGCTCATCGAAGAAAGATTCTCCGTGAGCTTAATACGTTGATTTCAGGTGGTTCGTCTGTCTCAGATGATGCCGTTGAGGAAGATGTCACCGACACTGAGTGGTTTTTTCTCACGTCGATGACTCAATCCTTTGTCAACGGCACCGGATCACTCAGCCAGGCTTATTTCAATTCAACCCCCGTGTGGATCACCGGGGCTGAAAGGCTTACTAATTCTGTCTGTGAACGGGCCCGTGAAGCACGGGTCCATGGGTTTCAGACCTTGGTATGTATACCAACGTCTTCAAGCGGGGTGGTTGAGCTTGCTTCTACAGAAATGATTCCATACAACGCTGATCTAATGGAGAAGATTCGTGTTTTGTTTAATTTCAACAATCCTGAAACAGGTTCGTGGCCGCTGAATTCCATTACAACGAGCGAGAACGATCCTTCATCTGTCTGGCTCAATGATCTCTCCGCCTCTGCAGCTATGGAAATTCGAGATACCACCGTTAACATCGCCACCGTACCTGCCATGAACGCAACCATTTCTGCAAATGCAACAATCGGTAAATCATTACCGTTTGAAACAAATGGTTCAACCAGTACTCTAACGGAAACACCAACTGCAGTTAACTTTGCTCAGCGTCAGAATCAGAACAACCAGAACCAGAGCTTTTTTCTGAAGGAACTGAATTTTTCTGGTTCAATGAAACCAGAATCCGGGGAGATTCTGAGTTTCGGTGAAAGTAAGAAAAGTTCTTATATCACCGGAAATGGAACTTTCTTTTCTGGTCAGTCACAGTTCGTTGCCGGTGAAGAAAACAGAAAAAGAAAGTCTCCTGTATCCAGAAGCAGCATTGACGATGGAATGCTTTCGTTTACTTCCGGTGTAGTCTTACCGTCTTCAAATATGAAATCAAGCAGCCGAGGTGGAGGCGGAGATTCTGATCATTCAGATCTAGATGTTTCTGCTGTGAAGGAAGGAGAGAGTAGCAGGGTGGTTGAGCCAGGGAAGCGACCGAAGAAACGAGGTAGAAAACCGGCTAATGGAAGAGAAGAACCGTTGAATCATGTAGAAGCAGAGAGACAGAGAAGAGAAAAGCTTAACCAGAAATTCTACGCTCTACGCGCTGTGGTTCCAAATGTTTCCAAAATGGACAAAGCATCGCTGCTAGGCGATGCTATTTCTTATATAAACGAATTGAAATCGAAGCTACAAGGGCTGGAATCGTCTAAAGGTGAATTGGAGAAACAATTAGGTGCAACAAAGAAGGAACTAGAACATGTTGCAAGCAAAAATCAAAATCAAAATCCAATTCCATTAGATAAAGAAAAGGAGAAAACAACAAGCTCAACAAGCTCTTCTAAGTTAATTGACTTGGATATTGAAGTGAAGATTATGGGTTGGGATGCTATGGTTAGGATTCAATGCAGCAAGAAGAATCATCCTGCGGCGAAGTTGATGGCGGCGTTGAAAGACTTAGACTTGGATGTTAATCATGCTAGTGTGTCTGTTGTGAATGATTTGATGATTCAACAAGCTTCTGTTAACATGGGAAGTCGATTTTACACACAAGAACAACTTTTGTCTCTTCTTTCTTCCAAAATTGGTGATGCACAAGGAGATTGA
Protein sequence

>MS.gene008990.t1

MNNIWDDNSSVMEAFMTTSDLSNFWLPTPHSATSTTAPPVPPPSQQSMFNQETLQHRLQALIEGAKESWTYAIFWQSSYDYTMATPLLGWGDGYYKGEDDKGKLKRVTPPEEQAHRRKILRELNTLISGGSSVSDDAVEEDVTDTEWFFLTSMTQSFVNGTGSLSQAYFNSTPVWITGAERLTNSVCERAREARVHGFQTLVCIPTSSSGVVELASTEMIPYNADLMEKIRVLFNFNNPETGSWPLNSITTSENDPSSVWLNDLSASAAMEIRDTTVNIATVPAMNATISANATIGKSLPFETNGSTSTLTETPTAVNFAQRQNQNNQNQSFFLKELNFSGSMKPESGEILSFGESKKSSYITGNGTFFSGQSQFVAGEENRKRKSPVSRSSIDDGMLSFTSGVVLPSSNMKSSSRGGGGDSDHSDLDVSAVKEGESSRVVEPGKRPKKRGRKPANGREEPLNHVEAERQRREKLNQKFYALRAVVPNVSKMDKASLLGDAISYINELKSKLQGLESSKGELEKQLGATKKELEHVASKNQNQNPIPLDKEKEKTTSSTSSSKLIDLDIEVKIMGWDAMVRIQCSKKNHPAAKLMAALKDLDLDVNHASVSVVNDLMIQQASVNMGSRFYTQEQLLSLLSSKIGDAQGD