AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene009036

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene009036.t1 MTR_2g461710 88.525 61 7 0 1 61 1 61 5.82e-36 115
MS.gene009036.t1 MTR_8g066260 100.000 61 0 0 1 61 1 61 2.57e-35 119
MS.gene009036.t1 MTR_5g046790 85.246 61 9 0 1 61 1 61 8.00e-33 112
MS.gene009036.t1 MTR_4g109830 90.000 60 6 0 1 60 1 60 3.86e-31 108
MS.gene009036.t1 MTR_5g046870 72.131 61 17 0 1 61 1 61 2.59e-29 100
MS.gene009036.t1 MTR_3g084980 80.328 61 12 0 1 61 1 61 3.69e-29 103
MS.gene009036.t1 MTR_8g097090 78.689 61 13 0 1 61 1 61 7.83e-29 102
MS.gene009036.t1 MTR_4g109810 75.410 61 15 0 1 61 1 61 1.08e-28 102
MS.gene009036.t1 MTR_6g015975 79.661 59 12 0 1 59 1 59 2.95e-28 101
MS.gene009036.t1 MTR_3g452380 72.131 61 17 0 1 61 16 76 6.01e-28 100
MS.gene009036.t1 MTR_8g033270 81.356 59 11 0 1 59 1 59 6.50e-28 100
MS.gene009036.t1 MTR_6g464720 77.049 61 14 0 1 61 1 61 6.65e-28 100
MS.gene009036.t1 MTR_1g101970 77.966 59 13 0 1 59 1 59 1.29e-27 97.8
MS.gene009036.t1 MTR_7g075850 78.689 61 13 0 1 61 1 61 1.86e-27 99.0
MS.gene009036.t1 MTR_3g005530 70.492 61 18 0 1 61 1 61 1.89e-27 98.6
MS.gene009036.t1 MTR_7g016600 78.689 61 13 0 1 61 1 61 3.32e-27 98.6
MS.gene009036.t1 MTR_7g016630 81.356 59 11 0 1 59 1 59 8.76e-27 97.4
MS.gene009036.t1 MTR_4g102530 73.770 61 16 0 1 61 1 61 3.11e-26 94.7
MS.gene009036.t1 MTR_8g033220 70.492 61 18 0 1 61 1 61 8.13e-26 94.4
MS.gene009036.t1 MTR_4g036050 71.186 59 17 0 1 59 1 59 8.94e-26 92.8
MS.gene009036.t1 MTR_8g033220 70.492 61 18 0 1 61 1 61 1.02e-25 94.0
MS.gene009036.t1 MTR_0003s0590 67.797 59 19 0 1 59 1 59 1.11e-25 94.7
MS.gene009036.t1 MTR_7g075870 71.186 59 17 0 1 59 1 59 1.93e-25 93.2
MS.gene009036.t1 MTR_7g075870 71.186 59 17 0 1 59 1 59 1.97e-25 92.8
MS.gene009036.t1 MTR_2g017865 72.131 61 17 0 1 61 16 76 3.93e-25 93.2
MS.gene009036.t1 MTR_8g087860 72.131 61 17 0 1 61 17 77 5.32e-25 92.4
MS.gene009036.t1 MTR_4g036050 71.186 59 17 0 1 59 1 59 9.44e-25 90.5
MS.gene009036.t1 MTR_4g036050 71.186 59 17 0 1 59 1 59 1.07e-24 90.5
MS.gene009036.t1 MTR_4g036050 71.186 59 17 0 1 59 1 59 1.47e-24 90.5
MS.gene009036.t1 MTR_5g066960 59.322 59 24 0 1 59 1 59 3.91e-24 85.5
MS.gene009036.t1 MTR_5g032520 66.129 62 21 0 1 62 1 62 1.06e-23 89.0
MS.gene009036.t1 MTR_5g032150 66.129 62 21 0 1 62 1 62 1.29e-23 88.6
MS.gene009036.t1 MTR_3g088615 63.934 61 22 0 1 61 1 61 2.40e-23 86.7
MS.gene009036.t1 MTR_1g038300 63.934 61 22 0 1 61 1 61 2.97e-23 87.8
MS.gene009036.t1 MTR_1g053070 67.213 61 20 0 1 61 1 61 9.66e-23 86.7
MS.gene009036.t1 MTR_5g021270 64.407 59 21 0 1 59 1 59 1.59e-22 85.9
MS.gene009036.t1 MTR_5g021270 64.407 59 21 0 1 59 1 59 1.71e-22 85.9
MS.gene009036.t1 MTR_2g009890 65.574 61 21 0 1 61 1 61 2.36e-22 86.3
MS.gene009036.t1 MTR_1g029670 59.016 61 25 0 1 61 1 61 2.72e-22 84.0
MS.gene009036.t1 MTR_3g113030 63.934 61 22 0 1 61 1 61 6.00e-22 84.3
MS.gene009036.t1 MTR_4g093030 61.667 60 23 0 1 60 1 60 7.65e-22 82.4
MS.gene009036.t1 MTR_4g093970 62.295 61 23 0 1 61 27 87 8.68e-22 84.0
MS.gene009036.t1 MTR_5g031000 60.656 61 24 0 1 61 1 61 3.01e-21 82.4
MS.gene009036.t1 MTR_5g031000 60.656 61 24 0 1 61 1 61 5.23e-21 82.0
MS.gene009036.t1 MTR_5g066180 57.377 61 26 0 1 61 1 61 1.05e-19 78.6
MS.gene009036.t1 MTR_4g084740 56.897 58 25 0 1 58 1 58 2.11e-19 79.3
MS.gene009036.t1 MTR_3g102570 66.038 53 18 0 1 53 1 53 1.01e-18 77.0
MS.gene009036.t1 MTR_1g041615 70.455 44 13 0 16 59 20 63 1.48e-17 70.9
MS.gene009036.t1 MTR_1g108510 52.632 57 27 0 2 58 9 65 7.70e-17 70.9
MS.gene009036.t1 MTR_2g030740 54.386 57 26 0 2 58 9 65 8.27e-17 70.9
MS.gene009036.t1 MTR_3g030770 52.632 57 27 0 2 58 9 65 1.12e-16 70.5
MS.gene009036.t1 MTR_3g052920 56.140 57 25 0 2 58 9 65 1.98e-16 70.1
MS.gene009036.t1 MTR_0121s0100 52.632 57 27 0 2 58 9 65 2.10e-16 67.8
MS.gene009036.t1 MTR_8g051580 47.541 61 32 0 1 61 1 61 4.68e-16 68.2
MS.gene009036.t1 MTR_3g052870 52.632 57 27 0 2 58 9 65 4.73e-16 68.6
MS.gene009036.t1 MTR_2g093190 50.877 57 28 0 2 58 9 65 6.17e-16 68.6
MS.gene009036.t1 MTR_8g079502 48.276 58 30 0 1 58 1 58 7.25e-16 67.4
MS.gene009036.t1 MTR_4g094632 43.548 62 35 0 1 62 1 62 8.53e-16 67.0
MS.gene009036.t1 MTR_8g043650 52.632 57 27 0 2 58 9 65 9.60e-16 68.2
MS.gene009036.t1 MTR_1g105920 52.632 57 27 0 2 58 9 65 9.70e-16 68.2
MS.gene009036.t1 MTR_1g105910 52.632 57 27 0 2 58 9 65 1.09e-15 68.2
MS.gene009036.t1 MTR_1g075600 52.632 57 27 0 2 58 9 65 1.12e-15 68.2
MS.gene009036.t1 MTR_8g086290 54.717 53 24 0 2 54 12 64 1.13e-15 67.0
MS.gene009036.t1 MTR_1g054265 48.276 58 30 0 1 58 1 58 1.44e-15 66.6
MS.gene009036.t1 MTR_5g045560 51.724 58 28 0 1 58 8 65 1.46e-15 67.8
MS.gene009036.t1 MTR_1g063160 46.552 58 31 0 1 58 1 58 1.66e-15 66.6
MS.gene009036.t1 MTR_1g077360 52.632 57 27 0 2 58 9 65 2.21e-15 67.4
MS.gene009036.t1 MTR_1g108580 52.632 57 27 0 2 58 9 65 2.24e-15 67.0
MS.gene009036.t1 MTR_1g047550 48.276 58 30 0 1 58 1 58 2.60e-15 66.2
MS.gene009036.t1 MTR_1g012570 52.632 57 27 0 2 58 9 65 2.73e-15 67.0
MS.gene009036.t1 MTR_2g105290 52.727 55 26 0 1 55 11 65 2.90e-15 65.9
MS.gene009036.t1 MTR_2g085280 50.877 57 28 0 2 58 9 65 3.43e-15 66.6
MS.gene009036.t1 MTR_2g085250 50.877 57 28 0 2 58 9 65 3.47e-15 66.6
MS.gene009036.t1 MTR_5g055100 50.877 57 28 0 2 58 9 65 4.06e-15 66.6
MS.gene009036.t1 MTR_4g094638 40.323 62 37 0 1 62 1 62 9.81e-15 64.7
MS.gene009036.t1 MTR_4g108720 50.943 53 26 0 1 53 1 53 1.03e-14 66.2
MS.gene009036.t1 MTR_5g053390 50.877 57 28 0 2 58 9 65 1.57e-14 65.1
MS.gene009036.t1 MTR_7g028448 72.500 40 11 0 16 55 26 65 1.95e-14 63.5
MS.gene009036.t1 MTR_4g036915 72.500 40 11 0 16 55 26 65 1.95e-14 63.5
MS.gene009036.t1 MTR_1g106070 49.123 57 29 0 2 58 9 65 2.20e-14 63.9
MS.gene009036.t1 MTR_5g041650 49.057 53 27 0 1 53 38 90 8.71e-14 63.9
MS.gene009036.t1 MTR_0121s0080 49.153 59 28 1 2 58 7 65 9.09e-14 62.8
MS.gene009036.t1 MTR_3g030780 47.368 57 30 0 2 58 9 65 1.00e-13 60.8
MS.gene009036.t1 MTR_4g131030 44.828 58 32 0 1 58 1 58 1.39e-13 62.0
MS.gene009036.t1 MTR_3g080940 46.552 58 31 0 1 58 8 65 1.50e-13 62.0
MS.gene009036.t1 MTR_8g046350 40.984 61 36 0 1 61 1 61 1.23e-12 58.9
MS.gene009036.t1 MTR_3g067875 50.980 51 25 0 11 61 1 51 1.75e-12 56.2
MS.gene009036.t1 MTR_1g105905 54.167 48 22 0 11 58 1 48 6.47e-12 57.8
MS.gene009036.t1 MTR_6g005440 46.939 49 26 0 1 49 1 49 1.03e-11 57.8
MS.gene009036.t1 MTR_6g018920 44.898 49 27 0 1 49 1 49 1.61e-11 57.4
MS.gene009036.t1 MTR_4g127140 54.545 55 25 0 1 55 11 65 1.94e-11 56.2
MS.gene009036.t1 MTR_1g114730 42.857 49 28 0 1 49 1 49 6.21e-11 55.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene009036.t1 AT5G60910 95.082 61 3 0 1 61 1 61 4.03e-36 121
MS.gene009036.t1 AT1G69120 96.721 61 2 0 1 61 1 61 8.58e-36 120
MS.gene009036.t1 AT1G69120 96.721 61 2 0 1 61 1 61 2.20e-35 119
MS.gene009036.t1 AT1G26310 88.525 61 7 0 1 61 1 61 2.67e-31 108
MS.gene009036.t1 AT3G02310 78.689 61 13 0 1 61 1 61 4.75e-30 104
MS.gene009036.t1 AT1G24260 78.689 61 13 0 1 61 1 61 6.99e-30 105
MS.gene009036.t1 AT1G24260 78.689 61 13 0 1 61 1 61 2.30e-29 103
MS.gene009036.t1 AT1G24260 78.689 61 13 0 1 61 1 61 2.35e-29 103
MS.gene009036.t1 AT2G45650 79.661 59 12 0 1 59 1 59 2.70e-29 103
MS.gene009036.t1 AT2G03710 74.576 59 15 0 1 59 1 59 5.77e-29 101
MS.gene009036.t1 AT5G15800 78.689 61 13 0 1 61 1 61 8.71e-29 102
MS.gene009036.t1 AT5G15800 78.689 61 13 0 1 61 1 61 1.02e-28 102
MS.gene009036.t1 AT3G30260 85.246 61 9 0 1 61 1 61 1.04e-28 102
MS.gene009036.t1 AT3G02310 78.689 61 13 0 1 61 1 61 1.97e-28 101
MS.gene009036.t1 AT4G09960 72.131 61 17 0 1 61 1 61 3.78e-28 100
MS.gene009036.t1 AT4G09960 72.131 61 17 0 1 61 2 62 5.62e-28 100
MS.gene009036.t1 AT4G09960 72.131 61 17 0 1 61 1 61 5.74e-28 100
MS.gene009036.t1 AT4G09960 72.131 61 17 0 1 61 11 71 6.25e-28 100
MS.gene009036.t1 AT4G09960 72.131 61 17 0 1 61 27 87 1.43e-27 99.8
MS.gene009036.t1 AT2G03710 74.576 59 15 0 1 59 1 59 7.89e-27 97.8
MS.gene009036.t1 AT2G03710 74.576 59 15 0 1 59 1 59 8.04e-27 97.8
MS.gene009036.t1 AT4G09960 72.131 61 17 0 1 61 96 156 8.20e-27 99.0
MS.gene009036.t1 AT3G61120 74.138 58 15 0 1 58 1 58 1.71e-26 96.7
MS.gene009036.t1 AT2G45660 69.355 62 19 0 1 62 1 62 2.49e-26 94.0
MS.gene009036.t1 AT2G45660 70.492 61 18 0 1 61 1 61 1.85e-25 93.2
MS.gene009036.t1 AT4G11880 68.852 61 19 0 1 61 1 61 2.74e-25 91.7
MS.gene009036.t1 AT4G11880 68.852 61 19 0 1 61 1 61 2.74e-25 91.7
MS.gene009036.t1 AT4G18960 71.667 60 17 0 2 61 18 77 2.91e-25 93.6
MS.gene009036.t1 AT3G58780 68.852 61 19 0 1 61 16 76 3.66e-25 94.0
MS.gene009036.t1 AT3G58780 67.742 62 20 0 1 62 16 77 4.22e-25 93.6
MS.gene009036.t1 AT1G71692 69.492 59 18 0 1 59 1 59 4.38e-25 92.0
MS.gene009036.t1 AT3G58780 68.852 61 19 0 1 61 22 82 4.93e-25 92.8
MS.gene009036.t1 AT3G58780 68.852 61 19 0 1 61 16 76 6.01e-25 92.4
MS.gene009036.t1 AT2G14210 63.934 61 22 0 1 61 1 61 9.81e-25 91.7
MS.gene009036.t1 AT2G14210 63.934 61 22 0 1 61 1 61 1.10e-24 91.7
MS.gene009036.t1 AT3G58780 66.129 62 21 0 1 62 16 77 1.15e-24 91.7
MS.gene009036.t1 AT2G42830 68.852 61 19 0 1 61 16 76 1.83e-24 91.3
MS.gene009036.t1 AT2G42830 68.852 61 19 0 1 61 16 76 2.07e-24 91.3
MS.gene009036.t1 AT4G22950 65.574 61 21 0 1 61 1 61 2.38e-24 89.4
MS.gene009036.t1 AT5G13790 74.576 59 15 0 1 59 1 59 3.02e-24 91.3
MS.gene009036.t1 AT5G13790 74.576 59 15 0 1 59 1 59 3.07e-24 91.3
MS.gene009036.t1 AT5G62165 61.017 59 23 0 1 59 1 59 3.78e-24 87.0
MS.gene009036.t1 AT5G51860 64.407 59 21 0 1 59 1 59 3.85e-24 89.4
MS.gene009036.t1 AT5G51860 64.407 59 21 0 1 59 1 59 5.72e-24 89.4
MS.gene009036.t1 AT4G22950 65.574 61 21 0 1 61 1 61 7.20e-24 89.0
MS.gene009036.t1 AT4G22950 65.574 61 21 0 1 61 1 61 7.20e-24 89.0
MS.gene009036.t1 AT5G62165 58.065 62 26 0 1 62 1 62 1.03e-23 87.0
MS.gene009036.t1 AT5G62165 58.065 62 26 0 1 62 1 62 1.03e-23 87.0
MS.gene009036.t1 AT5G62165 58.065 62 26 0 1 62 1 62 1.03e-23 87.0
MS.gene009036.t1 AT5G51870 66.102 59 20 0 1 59 1 59 1.10e-23 87.4
MS.gene009036.t1 AT3G57390 64.407 59 21 0 1 59 1 59 1.41e-23 88.6
MS.gene009036.t1 AT5G62165 58.065 62 26 0 1 62 1 62 1.63e-23 86.7
MS.gene009036.t1 AT5G62165 58.065 62 26 0 1 62 1 62 1.63e-23 86.7
MS.gene009036.t1 AT5G62165 58.065 62 26 0 1 62 1 62 1.63e-23 86.7
MS.gene009036.t1 AT5G62165 58.065 62 26 0 1 62 1 62 1.63e-23 86.7
MS.gene009036.t1 AT5G62165 58.065 62 26 0 1 62 1 62 1.63e-23 86.7
MS.gene009036.t1 AT5G51870 66.102 59 20 0 1 59 24 82 2.02e-23 87.4
MS.gene009036.t1 AT3G57230 59.016 61 25 0 1 61 1 61 2.68e-23 85.9
MS.gene009036.t1 AT5G51870 66.102 59 20 0 1 59 1 59 2.75e-23 87.4
MS.gene009036.t1 AT5G51870 62.903 62 23 0 1 62 1 62 3.16e-23 87.4
MS.gene009036.t1 AT5G62165 61.017 59 23 0 1 59 1 59 3.25e-23 87.0
MS.gene009036.t1 AT5G62165 61.017 59 23 0 1 59 1 59 3.25e-23 87.0
MS.gene009036.t1 AT5G51870 62.903 62 23 0 1 62 11 72 3.96e-23 87.4
MS.gene009036.t1 AT5G62165 61.017 59 23 0 1 59 1 59 4.41e-23 87.0
MS.gene009036.t1 AT5G62165 61.017 59 23 0 1 59 1 59 4.41e-23 87.0
MS.gene009036.t1 AT5G62165 61.017 59 23 0 1 59 1 59 4.41e-23 87.0
MS.gene009036.t1 AT5G20240 63.934 61 22 0 1 61 1 61 5.78e-23 85.1
MS.gene009036.t1 AT4G37940 59.016 61 25 0 1 61 1 61 8.92e-23 85.1
MS.gene009036.t1 AT5G20240 62.903 62 23 0 1 62 1 62 1.31e-22 85.5
MS.gene009036.t1 AT4G11880 68.852 61 19 0 1 61 1 61 1.36e-22 85.9
MS.gene009036.t1 AT4G11880 68.852 61 19 0 1 61 1 61 1.36e-22 85.9
MS.gene009036.t1 AT4G37940 59.016 61 25 0 1 61 1 61 2.57e-22 85.1
MS.gene009036.t1 AT4G37940 58.065 62 26 0 1 62 1 62 2.69e-22 85.1
MS.gene009036.t1 AT3G57230 58.065 62 26 0 1 62 1 62 3.00e-22 85.5
MS.gene009036.t1 AT3G57230 58.065 62 26 0 1 62 1 62 3.00e-22 85.5
MS.gene009036.t1 AT2G22540 61.290 62 24 0 1 62 1 62 3.95e-22 85.1
MS.gene009036.t1 AT2G22540 61.290 62 24 0 1 62 1 62 3.95e-22 85.1
MS.gene009036.t1 AT3G57390 64.407 59 21 0 1 59 1 59 1.55e-21 84.0
MS.gene009036.t1 AT5G23260 60.000 60 24 0 1 60 1 60 1.57e-21 83.6
MS.gene009036.t1 AT3G54340 64.407 59 21 0 1 59 1 59 2.65e-21 82.8
MS.gene009036.t1 AT5G23260 60.000 60 24 0 1 60 1 60 3.12e-21 82.8
MS.gene009036.t1 AT5G10140 61.017 59 23 0 1 59 1 59 5.80e-21 80.5
MS.gene009036.t1 AT5G10140 61.017 59 23 0 1 59 1 59 6.94e-21 80.5
MS.gene009036.t1 AT5G10140 61.017 59 23 0 1 59 1 59 7.91e-21 80.9
MS.gene009036.t1 AT2G22630 55.738 61 27 0 1 61 1 61 8.79e-21 81.3
MS.gene009036.t1 AT2G22630 55.738 61 27 0 1 61 1 61 8.79e-21 81.3
MS.gene009036.t1 AT4G24540 61.017 59 23 0 1 59 1 59 8.91e-21 81.3
MS.gene009036.t1 AT5G10140 61.017 59 23 0 1 59 1 59 9.08e-21 80.5
MS.gene009036.t1 AT5G23260 60.000 60 24 0 1 60 17 76 9.74e-21 82.0
MS.gene009036.t1 AT5G23260 60.000 60 24 0 1 60 17 76 1.05e-20 82.0
MS.gene009036.t1 AT2G22540 64.286 56 20 0 1 56 1 56 2.24e-20 80.5
MS.gene009036.t1 AT5G65070 54.237 59 27 0 1 59 1 59 1.64e-19 76.3
MS.gene009036.t1 AT5G65050 55.932 59 26 0 1 59 1 59 1.67e-19 77.0
MS.gene009036.t1 AT5G65070 54.237 59 27 0 1 59 1 59 4.00e-19 76.6
MS.gene009036.t1 AT5G65050 55.932 59 26 0 1 59 1 59 4.56e-19 75.9
MS.gene009036.t1 AT5G65050 55.932 59 26 0 1 59 1 59 4.95e-19 75.9
MS.gene009036.t1 AT5G65050 55.932 59 26 0 1 59 1 59 5.17e-19 76.3
MS.gene009036.t1 AT5G65070 54.237 59 27 0 1 59 1 59 6.34e-19 76.3
MS.gene009036.t1 AT1G22130 62.963 54 20 0 1 54 1 54 7.43e-19 77.8
MS.gene009036.t1 AT5G65070 54.237 59 27 0 1 59 1 59 9.20e-19 76.3
MS.gene009036.t1 AT5G65060 54.237 59 27 0 1 59 1 59 1.17e-18 75.1
MS.gene009036.t1 AT5G65060 54.237 59 27 0 1 59 1 59 1.17e-18 75.1
MS.gene009036.t1 AT5G65060 54.237 59 27 0 1 59 1 59 1.23e-18 75.1
MS.gene009036.t1 AT1G77980 61.111 54 21 0 1 54 1 54 1.89e-18 76.6
MS.gene009036.t1 AT5G65080 55.932 59 26 0 1 59 8 66 4.70e-18 73.6
MS.gene009036.t1 AT5G65080 55.932 59 26 0 1 59 8 66 9.20e-18 73.2
MS.gene009036.t1 AT1G31140 50.820 61 30 0 1 61 1 61 1.24e-17 72.8
MS.gene009036.t1 AT1G31140 50.820 61 30 0 1 61 1 61 1.27e-17 72.8
MS.gene009036.t1 AT5G65070 54.237 59 27 0 1 59 1 59 4.35e-17 71.6
MS.gene009036.t1 AT4G37435 54.386 57 26 0 1 57 1 57 2.03e-16 69.3
MS.gene009036.t1 AT2G34440 50.000 58 29 0 1 58 1 58 2.64e-16 68.6
MS.gene009036.t1 AT1G77950 57.407 54 23 0 1 54 1 54 4.46e-16 69.3
MS.gene009036.t1 AT1G77950 57.407 54 23 0 1 54 1 54 4.46e-16 69.3
MS.gene009036.t1 AT1G77950 57.407 54 23 0 1 54 1 54 4.46e-16 69.3
MS.gene009036.t1 AT1G77950 57.407 54 23 0 1 54 1 54 4.46e-16 69.3
MS.gene009036.t1 AT1G01530 51.724 58 28 0 1 58 6 63 1.60e-15 67.8
MS.gene009036.t1 AT1G65360 51.724 58 28 0 1 58 6 63 2.13e-15 67.0
MS.gene009036.t1 AT4G36590 53.333 60 28 0 2 61 7 66 3.05e-15 67.0
MS.gene009036.t1 AT1G18750 50.943 53 26 0 1 53 1 53 3.82e-15 67.8
MS.gene009036.t1 AT1G18750 50.943 53 26 0 1 53 1 53 4.03e-15 67.8
MS.gene009036.t1 AT1G18750 50.943 53 26 0 1 53 1 53 4.61e-15 67.4
MS.gene009036.t1 AT5G60440 50.877 57 28 0 2 58 7 63 7.60e-15 66.6
MS.gene009036.t1 AT1G77080 54.237 59 27 0 1 59 1 59 1.02e-14 63.9
MS.gene009036.t1 AT3G66656 41.935 62 36 0 1 62 1 62 1.11e-14 64.3
MS.gene009036.t1 AT1G77080 54.237 59 27 0 1 59 1 59 1.31e-14 64.3
MS.gene009036.t1 AT1G77080 54.237 59 27 0 1 59 1 59 1.81e-14 63.9
MS.gene009036.t1 AT2G03060 50.943 53 26 0 1 53 1 53 2.59e-14 65.5
MS.gene009036.t1 AT2G03060 50.943 53 26 0 1 53 1 53 2.59e-14 65.5
MS.gene009036.t1 AT2G03060 50.943 53 26 0 1 53 1 53 2.59e-14 65.5
MS.gene009036.t1 AT2G03060 50.943 53 26 0 1 53 1 53 3.94e-14 64.7
MS.gene009036.t1 AT1G72350 47.368 57 30 0 2 58 43 99 8.25e-14 62.8
MS.gene009036.t1 AT2G24840 49.180 61 31 0 1 61 62 122 1.17e-13 63.2
MS.gene009036.t1 AT1G69540 49.057 53 27 0 1 53 1 53 1.91e-13 62.8
MS.gene009036.t1 AT1G69540 49.057 53 27 0 1 53 1 53 2.05e-13 62.8
MS.gene009036.t1 AT3G04100 40.000 60 36 0 2 61 14 73 2.35e-13 61.6
MS.gene009036.t1 AT1G77080 54.237 59 27 0 1 59 1 59 2.41e-13 61.2
MS.gene009036.t1 AT1G77080 54.237 59 27 0 1 59 1 59 4.60e-13 60.8
MS.gene009036.t1 AT1G77080 54.237 59 27 0 1 59 1 59 4.74e-13 60.5
MS.gene009036.t1 AT2G26320 47.541 61 32 0 1 61 17 77 9.16e-13 58.2
MS.gene009036.t1 AT1G47760 43.103 58 33 0 1 58 1 58 3.48e-12 58.2
MS.gene009036.t1 AT1G29962 42.623 61 35 0 2 62 8 68 1.38e-11 56.6

Find 13 sgRNAs with CRISPR-Local

Find 8 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGAATATGCAACTGATTCT+TGG 0.230197 8.2:+36295103 MS.gene009036:CDS
GTCAGGTTACTTTCTCTAAA+AGG 0.230609 8.2:+36294989 MS.gene009036:CDS
TTCAAAGAGCTTTCCTTTGT+GGG 0.396584 8.2:-36295085 None:intergenic
ATTCAAAGAGCTTTCCTTTG+TGG 0.449409 8.2:-36295086 None:intergenic
AGAAAACAAGATCAATCGTC+AGG 0.497892 8.2:+36294972 MS.gene009036:CDS
ACTAAACATGGGAAGGGGTA+GGG 0.503033 8.2:+36294933 None:intergenic
TTGATTGTCTTCTCCCACAA+AGG 0.519399 8.2:+36295072 MS.gene009036:CDS
CACTAAACATGGGAAGGGGT+AGG 0.525426 8.2:+36294932 None:intergenic
ACTTTCTCTAAAAGGAGAGC+TGG 0.534012 8.2:+36294997 MS.gene009036:CDS
GGGGTAGGGTTCAGTTGAAG+AGG 0.541711 8.2:+36294947 MS.gene009036:CDS
AACATCACTAAACATGGGAA+GGG 0.564745 8.2:+36294927 None:intergenic
AAACATCACTAAACATGGGA+AGG 0.564857 8.2:+36294926 None:intergenic
ACATCACTAAACATGGGAAG+GGG 0.629498 8.2:+36294928 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! TTGAATATGCAACTGATTCT+TGG + chr8.2:36295103-36295122 MS.gene009036:CDS 30.0%
AGAAAACAAGATCAATCGTC+AGG + chr8.2:36294972-36294991 MS.gene009036:CDS 35.0%
ATTCAAAGAGCTTTCCTTTG+TGG - chr8.2:36295089-36295108 None:intergenic 35.0%
TTCAAAGAGCTTTCCTTTGT+GGG - chr8.2:36295088-36295107 None:intergenic 35.0%
! GTCAGGTTACTTTCTCTAAA+AGG + chr8.2:36294989-36295008 MS.gene009036:CDS 35.0%
TTGATTGTCTTCTCCCACAA+AGG + chr8.2:36295072-36295091 MS.gene009036:CDS 40.0%
! ACTTTCTCTAAAAGGAGAGC+TGG + chr8.2:36294997-36295016 MS.gene009036:CDS 40.0%
GGGGTAGGGTTCAGTTGAAG+AGG + chr8.2:36294947-36294966 MS.gene009036:CDS 55.0%


Chromosome Type Strat End Strand Name
chr8.2 gene 36294940 36295128 36294940 ID=MS.gene009036
chr8.2 mRNA 36294940 36295128 36294940 ID=MS.gene009036.t1;Parent=MS.gene009036
chr8.2 exon 36294940 36295128 36294940 ID=MS.gene009036.t1.exon1;Parent=MS.gene009036.t1
chr8.2 CDS 36294940 36295128 36294940 ID=cds.MS.gene009036.t1;Parent=MS.gene009036.t1
Gene Sequence

>MS.gene009036

ATGGGAAGGGGTAGGGTTCAGTTGAAGAGGATAGAAAACAAGATCAATCGTCAGGTTACTTTCTCTAAAAGGAGAGCTGGACTTCTCAAGAAAGCTCATGAGATCTCTGTTCTTTGTGATGCTGAAGTTGCTTTGATTGTCTTCTCCCACAAAGGAAAGCTCTTTGAATATGCAACTGATTCTTGGTAA
Protein sequence

>MS.gene009036.t1

MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYATDSW