Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene009156.t1 | AET03169.2 | 89.1 | 460 | 33 | 2 | 1 | 459 | 1 | 444 | 5.30E-162 | 580.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene009156.t1 | Q9FY82 | 55.4 | 233 | 98 | 2 | 1 | 229 | 1 | 231 | 1.4e-73 | 278.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene009156.t1 | G7LG55 | 89.1 | 460 | 33 | 2 | 1 | 459 | 1 | 444 | 3.8e-162 | 580.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene009156.t1 | TF | NAC |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene009156.t1 | MTR_8g063550 | 86.522 | 460 | 45 | 3 | 1 | 459 | 1 | 444 | 0.0 | 796 |
MS.gene009156.t1 | MTR_8g093580 | 73.361 | 488 | 90 | 11 | 1 | 453 | 1 | 483 | 0.0 | 674 |
MS.gene009156.t1 | MTR_8g063550 | 84.655 | 391 | 43 | 3 | 1 | 390 | 1 | 375 | 0.0 | 661 |
MS.gene009156.t1 | MTR_8g063550 | 88.235 | 340 | 36 | 1 | 1 | 340 | 1 | 336 | 0.0 | 613 |
MS.gene009156.t1 | MTR_8g063550 | 46.341 | 82 | 28 | 2 | 282 | 362 | 222 | 288 | 1.67e-11 | 65.9 |
MS.gene009156.t1 | MTR_3g096140 | 64.255 | 235 | 78 | 3 | 1 | 229 | 1 | 235 | 1.70e-106 | 317 |
MS.gene009156.t1 | MTR_3g096140 | 64.255 | 235 | 78 | 3 | 1 | 229 | 1 | 235 | 6.24e-105 | 316 |
MS.gene009156.t1 | MTR_3g096140 | 64.319 | 213 | 71 | 2 | 22 | 229 | 2 | 214 | 7.55e-96 | 292 |
MS.gene009156.t1 | MTR_1g090723 | 54.070 | 172 | 74 | 2 | 8 | 176 | 10 | 179 | 3.36e-65 | 221 |
MS.gene009156.t1 | MTR_1g097300 | 54.857 | 175 | 79 | 0 | 7 | 181 | 20 | 194 | 6.35e-65 | 219 |
MS.gene009156.t1 | MTR_1g090723 | 55.233 | 172 | 71 | 3 | 8 | 176 | 10 | 178 | 9.40e-65 | 219 |
MS.gene009156.t1 | MTR_1g090723 | 55.233 | 172 | 71 | 3 | 8 | 176 | 10 | 178 | 1.41e-64 | 219 |
MS.gene009156.t1 | MTR_0036s0150 | 52.571 | 175 | 77 | 3 | 7 | 178 | 6 | 177 | 1.25e-62 | 212 |
MS.gene009156.t1 | MTR_1g090720 | 49.558 | 226 | 98 | 6 | 6 | 225 | 42 | 257 | 1.25e-60 | 205 |
MS.gene009156.t1 | MTR_6g477900 | 53.595 | 153 | 71 | 0 | 6 | 158 | 6 | 158 | 2.93e-55 | 184 |
MS.gene009156.t1 | MTR_2g064090 | 52.866 | 157 | 73 | 1 | 1 | 156 | 1 | 157 | 1.13e-53 | 183 |
MS.gene009156.t1 | MTR_5g076850 | 50.888 | 169 | 82 | 1 | 1 | 168 | 1 | 169 | 8.62e-53 | 188 |
MS.gene009156.t1 | MTR_3g064580 | 50.888 | 169 | 81 | 2 | 1 | 167 | 1 | 169 | 4.22e-52 | 186 |
MS.gene009156.t1 | MTR_5g069030 | 49.045 | 157 | 80 | 0 | 1 | 157 | 20 | 176 | 2.30e-50 | 181 |
MS.gene009156.t1 | MTR_3g093050 | 49.359 | 156 | 79 | 0 | 1 | 156 | 17 | 172 | 1.53e-48 | 175 |
MS.gene009156.t1 | MTR_3g093040 | 48.101 | 158 | 78 | 2 | 1 | 156 | 103 | 258 | 1.82e-48 | 169 |
MS.gene009156.t1 | MTR_3g093050 | 49.359 | 156 | 79 | 0 | 1 | 156 | 17 | 172 | 3.24e-48 | 175 |
MS.gene009156.t1 | MTR_5g014300 | 45.405 | 185 | 91 | 2 | 1 | 178 | 1 | 182 | 1.03e-47 | 167 |
MS.gene009156.t1 | MTR_4g101680 | 42.453 | 212 | 112 | 6 | 8 | 215 | 9 | 214 | 1.18e-47 | 168 |
MS.gene009156.t1 | MTR_4g098630 | 47.273 | 165 | 84 | 1 | 1 | 162 | 1 | 165 | 2.68e-47 | 166 |
MS.gene009156.t1 | MTR_2g062730 | 46.471 | 170 | 83 | 4 | 8 | 175 | 12 | 175 | 1.68e-46 | 164 |
MS.gene009156.t1 | MTR_1g096430 | 49.080 | 163 | 74 | 4 | 8 | 166 | 9 | 166 | 4.68e-46 | 163 |
MS.gene009156.t1 | MTR_4g108760 | 47.170 | 159 | 80 | 2 | 6 | 162 | 17 | 173 | 5.19e-46 | 163 |
MS.gene009156.t1 | MTR_3g435150 | 47.799 | 159 | 79 | 2 | 6 | 162 | 16 | 172 | 1.54e-45 | 160 |
MS.gene009156.t1 | MTR_8g076110 | 47.682 | 151 | 76 | 2 | 8 | 157 | 8 | 156 | 1.76e-45 | 160 |
MS.gene009156.t1 | MTR_4g036030 | 41.111 | 180 | 94 | 5 | 8 | 183 | 9 | 180 | 3.91e-45 | 160 |
MS.gene009156.t1 | MTR_4g035590 | 50.323 | 155 | 65 | 4 | 8 | 157 | 10 | 157 | 5.76e-45 | 160 |
MS.gene009156.t1 | MTR_7g011130 | 42.541 | 181 | 86 | 3 | 5 | 169 | 18 | 196 | 1.46e-44 | 159 |
MS.gene009156.t1 | MTR_5g012080 | 40.816 | 196 | 101 | 6 | 8 | 196 | 9 | 196 | 1.46e-44 | 159 |
MS.gene009156.t1 | MTR_6g084430 | 47.682 | 151 | 75 | 2 | 6 | 156 | 5 | 151 | 1.85e-44 | 158 |
MS.gene009156.t1 | MTR_6g012670 | 44.186 | 172 | 88 | 3 | 5 | 172 | 19 | 186 | 2.17e-44 | 158 |
MS.gene009156.t1 | MTR_4g134460 | 45.513 | 156 | 76 | 4 | 6 | 158 | 54 | 203 | 4.08e-44 | 160 |
MS.gene009156.t1 | MTR_4g075980 | 52.288 | 153 | 63 | 3 | 7 | 156 | 16 | 161 | 4.73e-44 | 156 |
MS.gene009156.t1 | MTR_7g011120 | 42.857 | 175 | 88 | 3 | 5 | 169 | 7 | 179 | 1.24e-43 | 155 |
MS.gene009156.t1 | MTR_2g086880 | 45.752 | 153 | 75 | 2 | 1 | 153 | 13 | 157 | 1.47e-43 | 160 |
MS.gene009156.t1 | MTR_2g079990 | 45.513 | 156 | 83 | 1 | 1 | 156 | 11 | 164 | 2.14e-43 | 156 |
MS.gene009156.t1 | MTR_2g086880 | 45.752 | 153 | 75 | 2 | 1 | 153 | 13 | 157 | 2.40e-43 | 161 |
MS.gene009156.t1 | MTR_5g021710 | 46.104 | 154 | 74 | 3 | 8 | 157 | 10 | 158 | 3.84e-43 | 155 |
MS.gene009156.t1 | MTR_2g078700 | 48.428 | 159 | 76 | 3 | 6 | 160 | 23 | 179 | 4.54e-43 | 156 |
MS.gene009156.t1 | MTR_6g011860 | 45.963 | 161 | 75 | 5 | 6 | 156 | 15 | 173 | 9.68e-43 | 155 |
MS.gene009156.t1 | MTR_8g467490 | 43.210 | 162 | 79 | 4 | 6 | 156 | 14 | 173 | 1.65e-42 | 155 |
MS.gene009156.t1 | MTR_3g109340 | 45.912 | 159 | 81 | 3 | 6 | 162 | 22 | 177 | 2.20e-42 | 154 |
MS.gene009156.t1 | MTR_3g088110 | 45.860 | 157 | 79 | 3 | 5 | 158 | 6 | 159 | 2.54e-42 | 151 |
MS.gene009156.t1 | MTR_3g070030 | 42.604 | 169 | 88 | 3 | 9 | 172 | 22 | 186 | 2.65e-42 | 153 |
MS.gene009156.t1 | MTR_8g024480 | 42.945 | 163 | 77 | 3 | 8 | 157 | 17 | 176 | 3.56e-42 | 155 |
MS.gene009156.t1 | MTR_7g085260 | 47.134 | 157 | 75 | 3 | 6 | 156 | 17 | 171 | 4.33e-42 | 154 |
MS.gene009156.t1 | MTR_6g032770 | 46.154 | 156 | 76 | 4 | 6 | 156 | 18 | 170 | 1.73e-41 | 152 |
MS.gene009156.t1 | MTR_3g109340 | 44.654 | 159 | 82 | 3 | 6 | 162 | 22 | 176 | 2.71e-41 | 150 |
MS.gene009156.t1 | MTR_5g040420 | 43.478 | 161 | 79 | 4 | 6 | 156 | 14 | 172 | 4.18e-41 | 151 |
MS.gene009156.t1 | MTR_7g085220 | 37.441 | 211 | 105 | 6 | 6 | 201 | 8 | 206 | 8.43e-41 | 149 |
MS.gene009156.t1 | MTR_2g080010 | 40.625 | 192 | 94 | 5 | 4 | 182 | 13 | 197 | 5.60e-40 | 147 |
MS.gene009156.t1 | MTR_8g059170 | 45.752 | 153 | 79 | 2 | 6 | 156 | 14 | 164 | 1.02e-39 | 145 |
MS.gene009156.t1 | MTR_4g081870 | 43.558 | 163 | 86 | 3 | 2 | 160 | 5 | 165 | 1.08e-39 | 144 |
MS.gene009156.t1 | MTR_3g096920 | 42.675 | 157 | 84 | 3 | 5 | 158 | 6 | 159 | 1.98e-39 | 144 |
MS.gene009156.t1 | MTR_8g094580 | 42.405 | 158 | 84 | 3 | 5 | 158 | 6 | 160 | 3.47e-39 | 143 |
MS.gene009156.t1 | MTR_2157s0010 | 41.279 | 172 | 87 | 3 | 2 | 161 | 4 | 173 | 3.95e-39 | 142 |
MS.gene009156.t1 | MTR_1g008740 | 45.455 | 154 | 78 | 4 | 6 | 156 | 13 | 163 | 2.87e-38 | 142 |
MS.gene009156.t1 | MTR_2g079990 | 47.183 | 142 | 73 | 1 | 1 | 142 | 11 | 150 | 3.03e-38 | 143 |
MS.gene009156.t1 | MTR_1g008740 | 46.154 | 156 | 74 | 5 | 6 | 156 | 27 | 177 | 3.66e-38 | 142 |
MS.gene009156.t1 | MTR_8g023860 | 45.946 | 148 | 71 | 5 | 9 | 153 | 15 | 156 | 4.46e-38 | 143 |
MS.gene009156.t1 | MTR_7g005280 | 42.771 | 166 | 82 | 4 | 5 | 166 | 14 | 170 | 7.91e-38 | 139 |
MS.gene009156.t1 | MTR_5g041940 | 42.038 | 157 | 85 | 2 | 5 | 157 | 2 | 156 | 8.77e-38 | 139 |
MS.gene009156.t1 | MTR_2g064470 | 43.396 | 159 | 81 | 4 | 1 | 156 | 6 | 158 | 1.26e-37 | 139 |
MS.gene009156.t1 | MTR_5g090970 | 41.718 | 163 | 81 | 4 | 6 | 156 | 18 | 178 | 1.39e-37 | 139 |
MS.gene009156.t1 | MTR_7g100990 | 40.476 | 168 | 91 | 4 | 5 | 166 | 10 | 174 | 3.06e-37 | 139 |
MS.gene009156.t1 | MTR_8g023900 | 44.371 | 151 | 75 | 5 | 9 | 156 | 196 | 340 | 3.14e-37 | 142 |
MS.gene009156.t1 | MTR_8g023900 | 42.384 | 151 | 80 | 4 | 9 | 156 | 15 | 161 | 9.90e-34 | 132 |
MS.gene009156.t1 | MTR_3g116070 | 42.308 | 156 | 85 | 3 | 6 | 158 | 23 | 176 | 3.23e-37 | 139 |
MS.gene009156.t1 | MTR_4g089135 | 39.326 | 178 | 81 | 4 | 4 | 156 | 13 | 188 | 3.32e-37 | 139 |
MS.gene009156.t1 | MTR_3g070040 | 40.936 | 171 | 89 | 5 | 5 | 169 | 7 | 171 | 3.57e-37 | 139 |
MS.gene009156.t1 | MTR_2g068880 | 41.212 | 165 | 81 | 3 | 7 | 156 | 23 | 186 | 4.80e-37 | 138 |
MS.gene009156.t1 | MTR_2g093810 | 43.226 | 155 | 80 | 4 | 8 | 156 | 16 | 168 | 5.84e-37 | 138 |
MS.gene009156.t1 | MTR_1g069805 | 33.750 | 240 | 137 | 6 | 6 | 241 | 10 | 231 | 7.21e-37 | 137 |
MS.gene009156.t1 | MTR_5g090970 | 41.104 | 163 | 81 | 4 | 6 | 156 | 18 | 177 | 9.01e-37 | 137 |
MS.gene009156.t1 | MTR_2g068920 | 48.855 | 131 | 62 | 2 | 7 | 133 | 22 | 151 | 2.46e-36 | 135 |
MS.gene009156.t1 | MTR_8g023930 | 43.709 | 151 | 76 | 5 | 9 | 156 | 27 | 171 | 5.54e-36 | 139 |
MS.gene009156.t1 | MTR_8g023840 | 43.919 | 148 | 74 | 5 | 9 | 153 | 14 | 155 | 9.32e-36 | 137 |
MS.gene009156.t1 | MTR_7g097090 | 41.447 | 152 | 81 | 3 | 6 | 155 | 10 | 155 | 3.34e-35 | 132 |
MS.gene009156.t1 | MTR_3g096920 | 46.617 | 133 | 68 | 2 | 5 | 137 | 6 | 135 | 3.40e-35 | 134 |
MS.gene009156.t1 | MTR_8g099750 | 38.506 | 174 | 92 | 4 | 2 | 168 | 10 | 175 | 9.48e-33 | 124 |
MS.gene009156.t1 | MTR_3g098810 | 37.572 | 173 | 94 | 3 | 2 | 164 | 10 | 178 | 9.26e-32 | 122 |
MS.gene009156.t1 | MTR_3g098810 | 41.912 | 136 | 71 | 2 | 2 | 133 | 10 | 141 | 5.80e-29 | 112 |
MS.gene009156.t1 | MTR_2g086690 | 38.365 | 159 | 90 | 5 | 8 | 158 | 6 | 164 | 1.99e-28 | 113 |
MS.gene009156.t1 | MTR_7g105170 | 34.591 | 159 | 94 | 5 | 8 | 156 | 6 | 164 | 3.21e-26 | 107 |
MS.gene009156.t1 | MTR_8g023880 | 36.364 | 165 | 78 | 7 | 9 | 156 | 10 | 164 | 1.09e-25 | 106 |
MS.gene009156.t1 | MTR_4g052620 | 36.076 | 158 | 94 | 4 | 8 | 158 | 7 | 164 | 1.58e-25 | 105 |
MS.gene009156.t1 | MTR_4g094302 | 37.500 | 160 | 82 | 5 | 6 | 157 | 11 | 160 | 6.50e-25 | 101 |
MS.gene009156.t1 | MTR_8g094580 | 43.689 | 103 | 53 | 2 | 60 | 158 | 5 | 106 | 7.01e-25 | 102 |
MS.gene009156.t1 | MTR_4g094302 | 41.538 | 130 | 64 | 4 | 6 | 133 | 11 | 130 | 2.80e-23 | 96.3 |
MS.gene009156.t1 | MTR_8g093790 | 33.537 | 164 | 81 | 7 | 5 | 165 | 9 | 147 | 2.49e-18 | 83.2 |
MS.gene009156.t1 | MTR_7g070140 | 48.718 | 78 | 36 | 2 | 60 | 133 | 14 | 91 | 3.64e-18 | 81.3 |
MS.gene009156.t1 | MTR_3g096400 | 32.768 | 177 | 96 | 7 | 5 | 167 | 6 | 173 | 1.94e-15 | 75.5 |
MS.gene009156.t1 | MTR_7g083330 | 29.688 | 128 | 86 | 3 | 5 | 131 | 17 | 141 | 2.65e-13 | 68.9 |
MS.gene009156.t1 | MTR_1g097300 | 53.704 | 54 | 25 | 0 | 128 | 181 | 1 | 54 | 1.37e-12 | 69.7 |
MS.gene009156.t1 | MTR_7g070150 | 43.860 | 57 | 29 | 1 | 100 | 156 | 4 | 57 | 6.12e-12 | 62.0 |
MS.gene009156.t1 | MTR_4g078875 | 29.885 | 174 | 98 | 8 | 3 | 159 | 45 | 211 | 2.44e-11 | 64.7 |
MS.gene009156.t1 | MTR_2g014680 | 28.736 | 174 | 99 | 7 | 3 | 159 | 50 | 215 | 4.93e-11 | 63.9 |
MS.gene009156.t1 | MTR_7g083360 | 27.419 | 124 | 86 | 3 | 9 | 131 | 13 | 133 | 7.11e-11 | 60.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene009156.t1 | AT5G09330 | 52.157 | 255 | 108 | 3 | 1 | 243 | 1 | 253 | 3.60e-87 | 275 |
MS.gene009156.t1 | AT5G09330 | 52.157 | 255 | 108 | 3 | 1 | 243 | 1 | 253 | 3.60e-87 | 275 |
MS.gene009156.t1 | AT5G09330 | 52.157 | 255 | 108 | 3 | 1 | 243 | 1 | 253 | 3.60e-87 | 275 |
MS.gene009156.t1 | AT5G09330 | 52.157 | 255 | 108 | 3 | 1 | 243 | 1 | 253 | 3.60e-87 | 275 |
MS.gene009156.t1 | AT5G09330 | 52.157 | 255 | 108 | 3 | 1 | 243 | 1 | 253 | 3.60e-87 | 275 |
MS.gene009156.t1 | AT5G64060 | 54.741 | 232 | 95 | 2 | 1 | 228 | 1 | 226 | 4.95e-82 | 257 |
MS.gene009156.t1 | AT5G04410 | 57.303 | 178 | 76 | 0 | 2 | 179 | 5 | 182 | 9.47e-74 | 242 |
MS.gene009156.t1 | AT3G10500 | 57.059 | 170 | 73 | 0 | 2 | 171 | 5 | 174 | 1.71e-69 | 231 |
MS.gene009156.t1 | AT3G10490 | 55.682 | 176 | 76 | 2 | 6 | 180 | 27 | 201 | 1.70e-67 | 216 |
MS.gene009156.t1 | AT3G10480 | 56.897 | 174 | 73 | 2 | 6 | 178 | 27 | 199 | 8.48e-67 | 221 |
MS.gene009156.t1 | AT3G10480 | 56.069 | 173 | 75 | 1 | 6 | 178 | 27 | 198 | 1.51e-66 | 220 |
MS.gene009156.t1 | AT3G10490 | 55.682 | 176 | 76 | 2 | 6 | 180 | 27 | 201 | 1.68e-66 | 220 |
MS.gene009156.t1 | AT3G10480 | 47.826 | 207 | 73 | 3 | 6 | 178 | 27 | 232 | 5.41e-60 | 205 |
MS.gene009156.t1 | AT1G34190 | 50.000 | 174 | 87 | 0 | 7 | 180 | 17 | 190 | 8.82e-59 | 202 |
MS.gene009156.t1 | AT1G34180 | 47.826 | 184 | 90 | 1 | 7 | 184 | 17 | 200 | 9.80e-59 | 199 |
MS.gene009156.t1 | AT1G34180 | 47.826 | 184 | 90 | 1 | 7 | 184 | 17 | 200 | 6.57e-58 | 200 |
MS.gene009156.t1 | AT3G17730 | 54.430 | 158 | 72 | 0 | 1 | 158 | 1 | 158 | 1.56e-56 | 187 |
MS.gene009156.t1 | AT1G34180 | 44.898 | 196 | 90 | 2 | 7 | 184 | 17 | 212 | 3.09e-55 | 191 |
MS.gene009156.t1 | AT1G34180 | 44.898 | 196 | 90 | 2 | 7 | 184 | 17 | 212 | 1.86e-54 | 191 |
MS.gene009156.t1 | AT1G65910 | 50.299 | 167 | 83 | 0 | 1 | 167 | 1 | 167 | 6.11e-54 | 191 |
MS.gene009156.t1 | AT3G49530 | 45.274 | 201 | 95 | 3 | 1 | 200 | 8 | 194 | 1.68e-53 | 185 |
MS.gene009156.t1 | AT3G49530 | 45.274 | 201 | 95 | 3 | 1 | 200 | 8 | 194 | 7.49e-53 | 184 |
MS.gene009156.t1 | AT1G33060 | 50.641 | 156 | 77 | 0 | 1 | 156 | 19 | 174 | 3.78e-52 | 186 |
MS.gene009156.t1 | AT1G33060 | 50.641 | 156 | 77 | 0 | 1 | 156 | 19 | 174 | 3.83e-52 | 186 |
MS.gene009156.t1 | AT5G24590 | 50.633 | 158 | 77 | 1 | 1 | 157 | 8 | 165 | 4.93e-52 | 182 |
MS.gene009156.t1 | AT2G27300 | 50.980 | 153 | 67 | 2 | 1 | 153 | 9 | 153 | 2.60e-51 | 177 |
MS.gene009156.t1 | AT3G03200 | 52.866 | 157 | 73 | 1 | 1 | 156 | 1 | 157 | 1.49e-49 | 176 |
MS.gene009156.t1 | AT5G46590 | 52.597 | 154 | 69 | 3 | 6 | 156 | 6 | 158 | 4.45e-49 | 169 |
MS.gene009156.t1 | AT4G17980 | 50.968 | 155 | 72 | 2 | 6 | 156 | 6 | 160 | 1.36e-48 | 167 |
MS.gene009156.t1 | AT5G17260 | 50.318 | 157 | 77 | 1 | 1 | 156 | 1 | 157 | 2.20e-48 | 172 |
MS.gene009156.t1 | AT4G17980 | 50.000 | 160 | 76 | 2 | 1 | 156 | 1 | 160 | 2.92e-48 | 167 |
MS.gene009156.t1 | AT5G22290 | 49.351 | 154 | 69 | 3 | 1 | 153 | 16 | 161 | 1.05e-47 | 167 |
MS.gene009156.t1 | AT5G61430 | 48.428 | 159 | 78 | 2 | 6 | 162 | 16 | 172 | 1.43e-47 | 167 |
MS.gene009156.t1 | AT4G35580 | 46.795 | 156 | 83 | 0 | 1 | 156 | 4 | 159 | 1.66e-47 | 171 |
MS.gene009156.t1 | AT4G35580 | 46.795 | 156 | 83 | 0 | 1 | 156 | 4 | 159 | 1.72e-47 | 171 |
MS.gene009156.t1 | AT4G35580 | 46.795 | 156 | 83 | 0 | 1 | 156 | 4 | 159 | 1.79e-47 | 171 |
MS.gene009156.t1 | AT5G46590 | 55.556 | 135 | 59 | 1 | 6 | 139 | 6 | 140 | 2.60e-47 | 164 |
MS.gene009156.t1 | AT1G54330 | 49.080 | 163 | 80 | 1 | 1 | 163 | 1 | 160 | 6.14e-47 | 164 |
MS.gene009156.t1 | AT3G44290 | 47.368 | 152 | 72 | 2 | 2 | 153 | 10 | 153 | 6.43e-47 | 162 |
MS.gene009156.t1 | AT4G10350 | 48.701 | 154 | 72 | 2 | 8 | 157 | 11 | 161 | 9.83e-47 | 165 |
MS.gene009156.t1 | AT1G12260 | 42.077 | 183 | 97 | 4 | 8 | 187 | 9 | 185 | 1.15e-46 | 165 |
MS.gene009156.t1 | AT1G12260 | 42.077 | 183 | 97 | 4 | 8 | 187 | 9 | 185 | 1.33e-46 | 166 |
MS.gene009156.t1 | AT1G62700 | 38.462 | 221 | 114 | 7 | 8 | 222 | 9 | 213 | 1.86e-46 | 166 |
MS.gene009156.t1 | AT1G62700 | 38.462 | 221 | 114 | 7 | 8 | 222 | 9 | 213 | 1.86e-46 | 166 |
MS.gene009156.t1 | AT1G33280 | 48.701 | 154 | 69 | 3 | 8 | 157 | 10 | 157 | 4.20e-46 | 162 |
MS.gene009156.t1 | AT1G71930 | 46.203 | 158 | 78 | 3 | 8 | 162 | 11 | 164 | 4.63e-46 | 162 |
MS.gene009156.t1 | AT1G71930 | 46.203 | 158 | 78 | 3 | 8 | 162 | 11 | 164 | 4.63e-46 | 162 |
MS.gene009156.t1 | AT5G39610 | 49.057 | 159 | 77 | 2 | 6 | 162 | 20 | 176 | 5.23e-46 | 161 |
MS.gene009156.t1 | AT3G44290 | 47.368 | 152 | 72 | 2 | 2 | 153 | 10 | 153 | 6.14e-46 | 162 |
MS.gene009156.t1 | AT1G32870 | 49.405 | 168 | 81 | 2 | 6 | 171 | 10 | 175 | 7.74e-45 | 164 |
MS.gene009156.t1 | AT1G32870 | 49.405 | 168 | 81 | 2 | 6 | 171 | 10 | 175 | 8.64e-45 | 164 |
MS.gene009156.t1 | AT1G32510 | 45.283 | 159 | 79 | 2 | 6 | 156 | 6 | 164 | 1.06e-44 | 158 |
MS.gene009156.t1 | AT5G07680 | 46.875 | 160 | 79 | 3 | 6 | 162 | 3 | 159 | 1.16e-44 | 159 |
MS.gene009156.t1 | AT5G07680 | 46.875 | 160 | 79 | 3 | 6 | 162 | 17 | 173 | 1.59e-44 | 159 |
MS.gene009156.t1 | AT1G32870 | 49.405 | 168 | 81 | 2 | 6 | 171 | 46 | 211 | 2.12e-44 | 164 |
MS.gene009156.t1 | AT4G27410 | 36.325 | 234 | 146 | 2 | 1 | 233 | 9 | 240 | 6.11e-44 | 156 |
MS.gene009156.t1 | AT4G36160 | 44.000 | 175 | 80 | 5 | 8 | 177 | 12 | 173 | 8.82e-44 | 158 |
MS.gene009156.t1 | AT4G36160 | 44.000 | 175 | 80 | 5 | 8 | 177 | 12 | 173 | 8.82e-44 | 158 |
MS.gene009156.t1 | AT4G36160 | 44.000 | 175 | 80 | 5 | 8 | 177 | 16 | 177 | 8.87e-44 | 158 |
MS.gene009156.t1 | AT2G18060 | 42.857 | 175 | 81 | 5 | 8 | 177 | 11 | 171 | 1.35e-43 | 157 |
MS.gene009156.t1 | AT2G18060 | 42.857 | 175 | 81 | 5 | 8 | 177 | 11 | 171 | 1.35e-43 | 157 |
MS.gene009156.t1 | AT1G01720 | 42.553 | 188 | 97 | 4 | 5 | 184 | 6 | 190 | 1.50e-43 | 155 |
MS.gene009156.t1 | AT2G24430 | 47.712 | 153 | 75 | 3 | 6 | 156 | 16 | 165 | 2.38e-43 | 155 |
MS.gene009156.t1 | AT2G24430 | 47.712 | 153 | 75 | 3 | 6 | 156 | 16 | 165 | 2.38e-43 | 155 |
MS.gene009156.t1 | AT2G02450 | 44.805 | 154 | 80 | 3 | 6 | 158 | 51 | 200 | 2.61e-43 | 157 |
MS.gene009156.t1 | AT3G12977 | 44.099 | 161 | 87 | 2 | 1 | 160 | 13 | 171 | 2.80e-43 | 154 |
MS.gene009156.t1 | AT5G62380 | 45.283 | 159 | 80 | 3 | 2 | 157 | 3 | 157 | 3.55e-43 | 155 |
MS.gene009156.t1 | AT5G62380 | 45.283 | 159 | 80 | 3 | 2 | 157 | 3 | 157 | 3.55e-43 | 155 |
MS.gene009156.t1 | AT2G02450 | 44.805 | 154 | 80 | 3 | 6 | 158 | 51 | 200 | 4.59e-43 | 157 |
MS.gene009156.t1 | AT3G04060 | 46.497 | 157 | 79 | 3 | 6 | 159 | 20 | 174 | 6.93e-43 | 154 |
MS.gene009156.t1 | AT5G18270 | 48.428 | 159 | 73 | 4 | 6 | 159 | 21 | 175 | 7.94e-43 | 154 |
MS.gene009156.t1 | AT3G29035 | 46.108 | 167 | 86 | 2 | 6 | 170 | 24 | 188 | 8.25e-43 | 154 |
MS.gene009156.t1 | AT2G43000 | 47.020 | 151 | 77 | 2 | 7 | 156 | 19 | 167 | 9.47e-43 | 152 |
MS.gene009156.t1 | AT5G18270 | 47.799 | 159 | 74 | 4 | 6 | 159 | 21 | 175 | 9.67e-43 | 154 |
MS.gene009156.t1 | AT3G18400 | 45.000 | 160 | 79 | 3 | 6 | 162 | 5 | 158 | 9.80e-43 | 153 |
MS.gene009156.t1 | AT1G79580 | 47.368 | 152 | 75 | 3 | 8 | 157 | 19 | 167 | 1.69e-42 | 154 |
MS.gene009156.t1 | AT1G79580 | 47.368 | 152 | 75 | 3 | 8 | 157 | 19 | 167 | 1.69e-42 | 154 |
MS.gene009156.t1 | AT1G79580 | 47.368 | 152 | 75 | 3 | 8 | 157 | 19 | 167 | 1.69e-42 | 154 |
MS.gene009156.t1 | AT1G79580 | 47.368 | 152 | 75 | 3 | 8 | 157 | 19 | 167 | 1.69e-42 | 154 |
MS.gene009156.t1 | AT1G79580 | 47.368 | 152 | 75 | 3 | 8 | 157 | 19 | 167 | 1.69e-42 | 154 |
MS.gene009156.t1 | AT5G66300 | 43.636 | 165 | 89 | 3 | 8 | 170 | 14 | 176 | 3.17e-42 | 151 |
MS.gene009156.t1 | AT5G08790 | 44.304 | 158 | 80 | 3 | 6 | 158 | 7 | 161 | 7.82e-42 | 150 |
MS.gene009156.t1 | AT4G27410 | 34.940 | 249 | 146 | 3 | 1 | 233 | 9 | 257 | 7.95e-42 | 151 |
MS.gene009156.t1 | AT1G26870 | 45.062 | 162 | 76 | 4 | 6 | 156 | 16 | 175 | 8.03e-42 | 154 |
MS.gene009156.t1 | AT1G69490 | 41.398 | 186 | 101 | 4 | 6 | 187 | 9 | 190 | 1.70e-41 | 149 |
MS.gene009156.t1 | AT5G53950 | 49.359 | 156 | 71 | 4 | 6 | 156 | 17 | 169 | 2.29e-41 | 151 |
MS.gene009156.t1 | AT1G76420 | 46.452 | 155 | 78 | 3 | 6 | 158 | 22 | 173 | 2.77e-41 | 150 |
MS.gene009156.t1 | AT3G15500 | 43.949 | 157 | 86 | 1 | 1 | 157 | 9 | 163 | 2.81e-41 | 150 |
MS.gene009156.t1 | AT5G39820 | 41.379 | 174 | 77 | 4 | 6 | 156 | 20 | 191 | 3.47e-41 | 150 |
MS.gene009156.t1 | AT2G17040 | 45.752 | 153 | 73 | 3 | 7 | 156 | 7 | 152 | 3.58e-41 | 148 |
MS.gene009156.t1 | AT1G52890 | 43.949 | 157 | 86 | 1 | 6 | 162 | 14 | 168 | 3.64e-41 | 149 |
MS.gene009156.t1 | AT2G46770 | 41.916 | 167 | 77 | 4 | 8 | 157 | 18 | 181 | 4.11e-41 | 150 |
MS.gene009156.t1 | AT1G77450 | 45.455 | 154 | 78 | 3 | 8 | 158 | 12 | 162 | 4.59e-41 | 147 |
MS.gene009156.t1 | AT3G15170 | 45.912 | 159 | 80 | 3 | 8 | 162 | 22 | 178 | 1.31e-40 | 147 |
MS.gene009156.t1 | AT1G56010 | 40.884 | 181 | 93 | 4 | 1 | 173 | 14 | 188 | 1.29e-39 | 145 |
MS.gene009156.t1 | AT3G61910 | 41.566 | 166 | 77 | 3 | 8 | 156 | 13 | 175 | 2.05e-39 | 145 |
MS.gene009156.t1 | AT1G32770 | 41.071 | 168 | 82 | 3 | 5 | 158 | 15 | 179 | 5.38e-39 | 144 |
MS.gene009156.t1 | AT5G63790 | 42.405 | 158 | 83 | 3 | 6 | 158 | 50 | 204 | 6.54e-39 | 143 |
MS.gene009156.t1 | AT5G63790 | 42.405 | 158 | 83 | 3 | 6 | 158 | 60 | 214 | 7.00e-39 | 143 |
MS.gene009156.t1 | AT5G13180 | 45.122 | 164 | 82 | 3 | 2 | 163 | 10 | 167 | 1.95e-38 | 140 |
MS.gene009156.t1 | AT1G61110 | 42.169 | 166 | 81 | 3 | 4 | 156 | 14 | 177 | 5.08e-38 | 141 |
MS.gene009156.t1 | AT2G33480 | 44.872 | 156 | 79 | 2 | 2 | 157 | 11 | 159 | 2.12e-36 | 135 |
MS.gene009156.t1 | AT3G04070 | 42.683 | 164 | 78 | 4 | 6 | 156 | 10 | 170 | 2.43e-36 | 137 |
MS.gene009156.t1 | AT3G15510 | 43.125 | 160 | 76 | 5 | 10 | 156 | 21 | 178 | 2.61e-36 | 137 |
MS.gene009156.t1 | AT2G33480 | 44.872 | 156 | 81 | 1 | 2 | 157 | 11 | 161 | 3.61e-36 | 134 |
MS.gene009156.t1 | AT3G12910 | 40.120 | 167 | 80 | 4 | 7 | 156 | 22 | 185 | 2.65e-35 | 133 |
MS.gene009156.t1 | AT4G28530 | 41.765 | 170 | 75 | 4 | 5 | 156 | 9 | 172 | 7.65e-35 | 133 |
MS.gene009156.t1 | AT3G04070 | 37.430 | 179 | 82 | 3 | 6 | 156 | 10 | 186 | 1.71e-34 | 132 |
MS.gene009156.t1 | AT4G01520 | 44.444 | 153 | 75 | 4 | 9 | 156 | 7 | 154 | 3.34e-34 | 130 |
MS.gene009156.t1 | AT5G04395 | 45.205 | 146 | 66 | 3 | 6 | 137 | 28 | 173 | 6.92e-34 | 126 |
MS.gene009156.t1 | AT4G01540 | 45.098 | 153 | 74 | 4 | 9 | 156 | 7 | 154 | 2.43e-33 | 130 |
MS.gene009156.t1 | AT4G01540 | 45.098 | 153 | 74 | 4 | 9 | 156 | 7 | 154 | 2.70e-33 | 130 |
MS.gene009156.t1 | AT4G01540 | 45.098 | 153 | 74 | 4 | 9 | 156 | 7 | 154 | 3.12e-33 | 130 |
MS.gene009156.t1 | AT4G01540 | 45.098 | 153 | 74 | 4 | 9 | 156 | 7 | 154 | 4.23e-33 | 130 |
MS.gene009156.t1 | AT3G12977 | 50.485 | 103 | 50 | 1 | 60 | 161 | 17 | 119 | 6.97e-33 | 124 |
MS.gene009156.t1 | AT3G10490 | 54.902 | 102 | 44 | 2 | 80 | 180 | 1 | 101 | 1.66e-32 | 127 |
MS.gene009156.t1 | AT3G10490 | 54.902 | 102 | 44 | 2 | 80 | 180 | 1 | 101 | 1.66e-32 | 127 |
MS.gene009156.t1 | AT5G61430 | 50.476 | 105 | 50 | 1 | 60 | 162 | 5 | 109 | 3.89e-32 | 124 |
MS.gene009156.t1 | AT1G52880 | 40.881 | 159 | 80 | 4 | 10 | 156 | 21 | 177 | 2.31e-31 | 123 |
MS.gene009156.t1 | AT4G01550 | 37.327 | 217 | 111 | 8 | 5 | 209 | 3 | 206 | 2.44e-31 | 125 |
MS.gene009156.t1 | AT4G10350 | 51.579 | 95 | 46 | 0 | 63 | 157 | 20 | 114 | 1.54e-30 | 120 |
MS.gene009156.t1 | AT1G56010 | 43.590 | 117 | 63 | 1 | 60 | 173 | 5 | 121 | 2.21e-28 | 113 |
MS.gene009156.t1 | AT3G44350 | 37.500 | 160 | 93 | 6 | 5 | 158 | 4 | 162 | 3.09e-26 | 107 |
MS.gene009156.t1 | AT5G22380 | 34.783 | 161 | 98 | 5 | 5 | 158 | 4 | 164 | 1.13e-25 | 105 |
MS.gene009156.t1 | AT3G44350 | 37.580 | 157 | 93 | 5 | 5 | 156 | 4 | 160 | 3.98e-24 | 98.6 |
MS.gene009156.t1 | AT3G04420 | 37.333 | 150 | 87 | 3 | 9 | 156 | 6 | 150 | 6.68e-23 | 99.0 |
MS.gene009156.t1 | AT2G33480 | 47.368 | 95 | 50 | 0 | 63 | 157 | 10 | 104 | 2.04e-22 | 95.5 |
MS.gene009156.t1 | AT3G04420 | 37.333 | 150 | 87 | 3 | 9 | 156 | 6 | 150 | 2.29e-22 | 98.2 |
MS.gene009156.t1 | AT1G02230 | 37.333 | 150 | 82 | 5 | 9 | 153 | 6 | 148 | 3.05e-22 | 98.2 |
MS.gene009156.t1 | AT1G02250 | 38.281 | 128 | 71 | 3 | 9 | 131 | 6 | 130 | 9.01e-21 | 94.0 |
MS.gene009156.t1 | AT4G28530 | 37.405 | 131 | 62 | 3 | 5 | 117 | 9 | 137 | 2.46e-19 | 89.0 |
MS.gene009156.t1 | AT1G02220 | 33.108 | 148 | 89 | 4 | 9 | 154 | 6 | 145 | 1.37e-18 | 87.8 |
MS.gene009156.t1 | AT2G18060 | 30.366 | 191 | 97 | 8 | 86 | 270 | 2 | 162 | 1.48e-18 | 85.9 |
MS.gene009156.t1 | AT5G64530 | 39.394 | 132 | 64 | 5 | 6 | 135 | 3 | 120 | 3.00e-18 | 82.8 |
MS.gene009156.t1 | AT5G64530 | 39.394 | 132 | 64 | 5 | 6 | 135 | 3 | 120 | 3.69e-18 | 82.0 |
MS.gene009156.t1 | AT2G43000 | 42.529 | 87 | 49 | 1 | 71 | 156 | 3 | 89 | 1.13e-17 | 81.6 |
MS.gene009156.t1 | AT5G22290 | 47.059 | 68 | 28 | 2 | 87 | 153 | 2 | 62 | 7.69e-17 | 80.1 |
MS.gene009156.t1 | AT1G01010 | 32.692 | 156 | 86 | 6 | 9 | 153 | 6 | 153 | 4.53e-16 | 80.5 |
MS.gene009156.t1 | AT3G56530 | 30.201 | 149 | 99 | 3 | 8 | 154 | 54 | 199 | 8.07e-14 | 72.8 |
MS.gene009156.t1 | AT3G04430 | 30.435 | 138 | 72 | 6 | 12 | 132 | 6 | 136 | 2.86e-12 | 65.9 |
MS.gene009156.t1 | AT4G28500 | 30.286 | 175 | 96 | 9 | 3 | 159 | 56 | 222 | 5.47e-11 | 63.9 |
MS.gene009156.t1 | AT5G56620 | 28.750 | 240 | 119 | 10 | 6 | 210 | 43 | 265 | 5.73e-11 | 64.7 |
MS.gene009156.t1 | AT5G56620 | 29.167 | 240 | 118 | 11 | 6 | 210 | 43 | 265 | 5.87e-11 | 64.7 |
Find 146 sgRNAs with CRISPR-Local
Find 202 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCCATATTGTGCACCATTCC+TGG | 0.177058 | 8.1:-39967160 | None:intergenic |
CTCCAGTCTTCCTCATTAAA+TGG | 0.199186 | 8.1:-39967186 | None:intergenic |
TTCGATGGCTATACCGAAAT+TGG | 0.217229 | 8.1:+39965887 | None:intergenic |
CTCCATGCTATTGGATATAA+TGG | 0.269719 | 8.1:+39967303 | MS.gene009156:CDS |
CCCAGGAATGGTGCACAATA+TGG | 0.271510 | 8.1:+39967159 | MS.gene009156:CDS |
CCTATTTGACATTCATTTGC+AGG | 0.281187 | 8.1:-39967594 | None:intergenic |
ATCCAATAGCATGGAGATTC+TGG | 0.283199 | 8.1:-39967296 | None:intergenic |
CGAAACCCCGGAACCAATTT+CGG | 0.285219 | 8.1:-39965900 | None:intergenic |
TTATCTCCAAAACGGGGATT+TGG | 0.288256 | 8.1:+39966151 | MS.gene009156:CDS |
CCTGTTTGACATGAATTTGC+AGG | 0.309691 | 8.1:-39967426 | None:intergenic |
CCTGCAAATTCATGTCAAAT+AGG | 0.314809 | 8.1:+39967468 | MS.gene009156:CDS |
CCTGTTTGACGTGAATTTGC+AGG | 0.316892 | 8.1:-39967633 | None:intergenic |
CCTGCAAATGAATGTCAAAT+AGG | 0.318011 | 8.1:+39967594 | MS.gene009156:CDS |
CCTATTTGACATGAATTTGC+AGG | 0.318113 | 8.1:-39967468 | None:intergenic |
ATGAATCGATCTACGGAAAC+AGG | 0.329353 | 8.1:+39966224 | MS.gene009156:CDS |
ATCTAGACTCCGAGATGTTC+TGG | 0.337030 | 8.1:+39968242 | MS.gene009156:CDS |
GACCAGAATCTCCATGCTAT+TGG | 0.337192 | 8.1:+39967294 | MS.gene009156:CDS |
CCTGTTTGACATGAATTTGC+TGG | 0.344593 | 8.1:-39967372 | None:intergenic |
ACCACTCCAAATCCCCGTTT+TGG | 0.346187 | 8.1:-39966157 | None:intergenic |
GATCTACGGAAACAGGGTTT+TGG | 0.358106 | 8.1:+39966231 | MS.gene009156:CDS |
GATAAGGACCTAACTGATAA+AGG | 0.358909 | 8.1:+39966389 | MS.gene009156:CDS |
GGCTATACCGAAATTGGTTC+CGG | 0.364984 | 8.1:+39965893 | MS.gene009156:CDS |
ATTTATCTTATCTCCAAAAC+GGG | 0.365480 | 8.1:+39966144 | MS.gene009156:CDS |
CCTTCAAATTCATGTCAAAC+AGG | 0.368528 | 8.1:+39967552 | MS.gene009156:CDS |
CTCGTGGTGATCGCACTGAT+TGG | 0.372975 | 8.1:+39966342 | MS.gene009156:CDS |
TGACATTCATTTGCAGGATC+GGG | 0.375493 | 8.1:-39967588 | None:intergenic |
GAACAATTCCTTTATCAGTT+AGG | 0.379956 | 8.1:-39966397 | None:intergenic |
GGGTTTCGATTCTCTCCAAC+TGG | 0.381256 | 8.1:+39965915 | MS.gene009156:CDS |
GGATGACTACTTGGATTTCA+TGG | 0.384800 | 8.1:+39968210 | MS.gene009156:CDS |
TTTGGGAGACCTGGATTGCT+TGG | 0.388164 | 8.1:+39968135 | MS.gene009156:CDS |
TTGGGAGACCTGGATTGCTT+GGG | 0.394189 | 8.1:+39968136 | MS.gene009156:CDS |
ATGTGCTAAAGTCAGCATTC+TGG | 0.394807 | 8.1:-39968168 | None:intergenic |
TTTCTCAAAAGGAAAGTGTT+GGG | 0.395776 | 8.1:+39965957 | MS.gene009156:CDS |
GATTTATCTTATCTCCAAAA+CGG | 0.426997 | 8.1:+39966143 | MS.gene009156:intron |
AAGTCAGCATTCTGGCCAAC+AGG | 0.430726 | 8.1:-39968160 | None:intergenic |
AACTGATAAAGGAATTGTTC+AGG | 0.431894 | 8.1:+39966400 | MS.gene009156:CDS |
GCTATACCGAAATTGGTTCC+GGG | 0.435182 | 8.1:+39965894 | MS.gene009156:CDS |
CCATATTGTGCACCATTCCT+GGG | 0.435926 | 8.1:-39967159 | None:intergenic |
AAAACACTGATATTTCATAC+TGG | 0.437726 | 8.1:+39966311 | MS.gene009156:CDS |
TGACATGAATTTGCAGGGTA+GGG | 0.440925 | 8.1:-39967462 | None:intergenic |
TGACATGAATTTGCAGGGTC+GGG | 0.444499 | 8.1:-39967420 | None:intergenic |
TGTCCGATAGGGAAGAAGTA+TGG | 0.449188 | 8.1:+39966188 | MS.gene009156:CDS |
TGACATGAATTTGCTGGATC+GGG | 0.450774 | 8.1:-39967366 | None:intergenic |
CCTGTTTGACATGAATTTGA+AGG | 0.451294 | 8.1:-39967552 | None:intergenic |
CCTGCAAATTCACGTCAAAC+AGG | 0.452097 | 8.1:+39967633 | MS.gene009156:CDS |
TGACGTGAATTTGCAGGGTC+GGG | 0.454809 | 8.1:-39967627 | None:intergenic |
TGTCAAACAGGATTACAAAC+AGG | 0.456291 | 8.1:+39967384 | MS.gene009156:CDS |
CCAGCAAATTCATGTCAAAC+AGG | 0.459332 | 8.1:+39967372 | MS.gene009156:CDS |
CAACAGGTCCCAAGCAATCC+AGG | 0.459478 | 8.1:-39968144 | None:intergenic |
CCTGTGAATTCATGTCAAAC+AGG | 0.460258 | 8.1:+39967510 | MS.gene009156:CDS |
TGACATGAATTTGAAGGGTC+GGG | 0.460660 | 8.1:-39967546 | None:intergenic |
CAACAGAATAATCAAATTGT+GGG | 0.461766 | 8.1:+39966281 | MS.gene009156:CDS |
TGAGTATAGGCTTGAAGATA+AGG | 0.462659 | 8.1:+39966373 | MS.gene009156:CDS |
TTGACATTCATTTGCAGGAT+CGG | 0.462975 | 8.1:-39967589 | None:intergenic |
CCAGGAATGGTGCACAATAT+GGG | 0.464995 | 8.1:+39967160 | MS.gene009156:CDS |
ATTGGGTTATGCATGAGTAT+AGG | 0.467758 | 8.1:+39966360 | MS.gene009156:CDS |
ATATCCATGCCATGTCAATC+AGG | 0.469355 | 8.1:+39967330 | MS.gene009156:CDS |
CCTGCAAATTCATGTCAAAC+AGG | 0.469358 | 8.1:+39967426 | MS.gene009156:CDS |
AAAAGGAAGGTCCTGGTCCC+AGG | 0.470057 | 8.1:+39967142 | MS.gene009156:CDS |
CACATACGGAATGGCTCCTA+CGG | 0.471738 | 8.1:+39968186 | MS.gene009156:CDS |
CATATACAAATACGCACCTT+GGG | 0.480163 | 8.1:+39966016 | MS.gene009156:CDS |
TTGACGTGAATTTGCAGGGT+CGG | 0.485241 | 8.1:-39967628 | None:intergenic |
TTGACATGAATTTGCAGGGT+AGG | 0.487996 | 8.1:-39967463 | None:intergenic |
AGTGCAGCTGGCTCAGCAAA+TGG | 0.489746 | 8.1:-39967228 | None:intergenic |
AAAGTGGGAGCTAGTGCAGC+TGG | 0.489936 | 8.1:-39967240 | None:intergenic |
TCGTGGTGATCGCACTGATT+GGG | 0.491503 | 8.1:+39966343 | MS.gene009156:CDS |
AACCATTTAATGAGGAAGAC+TGG | 0.493900 | 8.1:+39967184 | MS.gene009156:CDS |
CTGGATTGCTTGGGACCTGT+TGG | 0.494191 | 8.1:+39968145 | MS.gene009156:CDS |
CCTGTTTGACATGAATTCAC+AGG | 0.497735 | 8.1:-39967510 | None:intergenic |
AAATTCATGTAAAACAAGAT+TGG | 0.499270 | 8.1:+39967683 | MS.gene009156:CDS |
AATCTGTAAGGTATTTCAAA+AGG | 0.505571 | 8.1:+39967125 | MS.gene009156:CDS |
TTGATCAATTCAACTCCAGT+TGG | 0.510807 | 8.1:-39965930 | None:intergenic |
CTTCCATACTTCTTCCCTAT+CGG | 0.514378 | 8.1:-39966191 | None:intergenic |
TTGACATGAATTTGCAGGGT+CGG | 0.514389 | 8.1:-39967421 | None:intergenic |
TTGACATGAATTTGCTGGAT+CGG | 0.514396 | 8.1:-39967367 | None:intergenic |
ACATATACAAATACGCACCT+TGG | 0.514869 | 8.1:+39966015 | MS.gene009156:CDS |
CTGTTTGACATGAATTTGAA+GGG | 0.516573 | 8.1:-39967551 | None:intergenic |
GAATTTGCAGGGTCGGGAGA+AGG | 0.521896 | 8.1:-39967414 | None:intergenic |
CTGTTTGACGTGAATTTGCA+GGG | 0.521995 | 8.1:-39967632 | None:intergenic |
GGATTCCTATGTAATCTGTA+AGG | 0.523374 | 8.1:+39967113 | MS.gene009156:intron |
AGAAGTATGGAAGTGGGTCG+AGG | 0.523425 | 8.1:+39966201 | MS.gene009156:CDS |
TCAACAGAATAATCAAATTG+TGG | 0.524176 | 8.1:+39966280 | MS.gene009156:CDS |
TGGTATTTCTTCTGTCCGAT+AGG | 0.528063 | 8.1:+39966176 | MS.gene009156:CDS |
TTGACATGAATTTGAAGGGT+CGG | 0.530544 | 8.1:-39967547 | None:intergenic |
CTGTTTGACATGAATTTGCA+GGG | 0.532638 | 8.1:-39967425 | None:intergenic |
GAGTGCTGCGGAACCTAAGT+TGG | 0.533048 | 8.1:+39968267 | MS.gene009156:CDS |
CAATCCTGATTGACATGGCA+TGG | 0.533909 | 8.1:-39967334 | None:intergenic |
TATGAATTATCCACAGGGTC+GGG | 0.534846 | 8.1:-39967714 | None:intergenic |
CATGAATTTGCAGGGCCAGT+GGG | 0.536500 | 8.1:-39967669 | None:intergenic |
AAATACCTTACAGATTACAT+AGG | 0.536956 | 8.1:-39967118 | None:intergenic |
TTCTCAAAAGGAAAGTGTTG+GGG | 0.537474 | 8.1:+39965958 | MS.gene009156:CDS |
AACCATTATATCCAATAGCA+TGG | 0.540691 | 8.1:-39967305 | None:intergenic |
GAATTTGCTGGATCGGGAGA+AGG | 0.544144 | 8.1:-39967360 | None:intergenic |
TTATCCACAGGGTCGGGAGA+AGG | 0.544235 | 8.1:-39967708 | None:intergenic |
TGATGATATGAATTATCCAC+AGG | 0.545478 | 8.1:-39967720 | None:intergenic |
TGATGATATGAATTATCCAC+AGG | 0.545478 | 8.1:-39967762 | None:intergenic |
GAATTTGAAGGGTCGGGAGA+CGG | 0.546357 | 8.1:-39967540 | None:intergenic |
GGATTGGAGCTGTCTCCCAC+TGG | 0.549474 | 8.1:+39967654 | MS.gene009156:CDS |
GGTATTTCTTCTGTCCGATA+GGG | 0.553898 | 8.1:+39966177 | MS.gene009156:CDS |
AATGCTGACTTTAGCACATA+CGG | 0.554890 | 8.1:+39968172 | MS.gene009156:CDS |
TGTAAGGTATTTCAAAAGGA+AGG | 0.556870 | 8.1:+39967129 | MS.gene009156:CDS |
ACATACGGAATGGCTCCTAC+GGG | 0.561143 | 8.1:+39968187 | MS.gene009156:CDS |
GAAGGTCCTGGTCCCAGGAA+TGG | 0.561485 | 8.1:+39967147 | MS.gene009156:CDS |
GAATTTGCAGGGTAGGGAGA+AGG | 0.564019 | 8.1:-39967456 | None:intergenic |
GACTGGAGTGATGATGAAGT+AGG | 0.564465 | 8.1:+39967201 | MS.gene009156:CDS |
TCATTTGCAGGATCGGGAGA+CGG | 0.564896 | 8.1:-39967582 | None:intergenic |
ACATGAATTTGCAGGGCCAG+TGG | 0.576347 | 8.1:-39967670 | None:intergenic |
GGCCAGGAAAACAATGCTGA+AGG | 0.577250 | 8.1:+39968085 | MS.gene009156:intron |
AAATTCACGTCAAACAGGAT+TGG | 0.579546 | 8.1:+39967638 | MS.gene009156:CDS |
ATATGAATTATCCACAGGGT+CGG | 0.580394 | 8.1:-39967715 | None:intergenic |
ATAGGGAAGAAGTATGGAAG+TGG | 0.581783 | 8.1:+39966194 | MS.gene009156:CDS |
GTATTTCAAAAGGAAGGTCC+TGG | 0.582263 | 8.1:+39967135 | MS.gene009156:CDS |
ATACGGAATGGCTCCTACGG+GGG | 0.584987 | 8.1:+39968189 | MS.gene009156:CDS |
TTAGATGTCACAGGCAAAGT+GGG | 0.587463 | 8.1:-39967255 | None:intergenic |
ACAAAACTATTAGATGTCAC+AGG | 0.590588 | 8.1:-39967264 | None:intergenic |
CTGTTTGACATGAATTCACA+GGG | 0.594081 | 8.1:-39967509 | None:intergenic |
CTATTTGACATGAATTTGCA+GGG | 0.594947 | 8.1:-39967467 | None:intergenic |
ATATGGGAAACCATTTAATG+AGG | 0.595239 | 8.1:+39967176 | MS.gene009156:CDS |
AGCACTCTGCCAGAACATCT+CGG | 0.596496 | 8.1:-39968251 | None:intergenic |
TAACTACCTGGGAGATCCCA+AGG | 0.602529 | 8.1:-39966032 | None:intergenic |
TTTGCAGGGTAGGGAGAAGG+TGG | 0.603489 | 8.1:-39967453 | None:intergenic |
ATTAGATGTCACAGGCAAAG+TGG | 0.604507 | 8.1:-39967256 | None:intergenic |
TGTGCACCATTCCTGGGACC+AGG | 0.606475 | 8.1:-39967153 | None:intergenic |
TACGCACCTTGGGATCTCCC+AGG | 0.607324 | 8.1:+39966026 | MS.gene009156:CDS |
TGACTTTAGCACATACGGAA+TGG | 0.608742 | 8.1:+39968177 | MS.gene009156:CDS |
GTCGAGGATGAATCGATCTA+CGG | 0.611940 | 8.1:+39966217 | MS.gene009156:CDS |
GGCATCAATCCTGATTGACA+TGG | 0.616405 | 8.1:-39967339 | None:intergenic |
TTTGCAGGGTCGGGAGAAGG+CGG | 0.617658 | 8.1:-39967411 | None:intergenic |
CTATACCGAAATTGGTTCCG+GGG | 0.624855 | 8.1:+39965895 | MS.gene009156:CDS |
TCCAAAACGGGGATTTGGAG+TGG | 0.632470 | 8.1:+39966156 | MS.gene009156:CDS |
GAATTCACAGGGTCTACAGA+AGG | 0.634919 | 8.1:-39967498 | None:intergenic |
AACAGAATAATCAAATTGTG+GGG | 0.640227 | 8.1:+39966282 | MS.gene009156:CDS |
CTTCAAATTCATGTCAAACA+GGG | 0.645767 | 8.1:+39967553 | MS.gene009156:CDS |
TGAATCGATCTACGGAAACA+GGG | 0.649117 | 8.1:+39966225 | MS.gene009156:CDS |
GATGTTCTGGCAGAGTGCTG+CGG | 0.652067 | 8.1:+39968255 | MS.gene009156:CDS |
GGTGCCTTCTCCCGACCCTG+TGG | 0.663863 | 8.1:+39967704 | MS.gene009156:CDS |
TAGGGAAGAAGTATGGAAGT+GGG | 0.665858 | 8.1:+39966195 | MS.gene009156:CDS |
GTTGGAGAGAATCGAAACCC+CGG | 0.668142 | 8.1:-39965912 | None:intergenic |
TTTATCTTATCTCCAAAACG+GGG | 0.680682 | 8.1:+39966145 | MS.gene009156:CDS |
CATACGGAATGGCTCCTACG+GGG | 0.702272 | 8.1:+39968188 | MS.gene009156:CDS |
CGACGACGACATATTGCCTG+AGG | 0.702294 | 8.1:+39967827 | MS.gene009156:CDS |
CAATCAGTGCGATCACCACG+AGG | 0.732420 | 8.1:-39966341 | None:intergenic |
GATGATATGAATTATCCACA+GGG | 0.739152 | 8.1:-39967761 | None:intergenic |
CATACTGGAAAAGCACCTCG+TGG | 0.744525 | 8.1:+39966326 | MS.gene009156:CDS |
GATGATATGAATTATCCACA+GGG | 0.748736 | 8.1:-39967719 | None:intergenic |
TGTTAATAATGATGACCCTG+TGG | 0.779783 | 8.1:+39967746 | MS.gene009156:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AAATATTATGTGCTTTATTA+TGG | + | chr8.1:39966525-39966544 | MS.gene009156:intron | 15.0% |
!! | AAATTCATGTAAAACAAGAT+TGG | + | chr8.1:39967683-39967702 | MS.gene009156:CDS | 20.0% |
!! | AATGATTAAAATATGCAAGA+AGG | - | chr8.1:39967014-39967033 | None:intergenic | 20.0% |
!! | ATCACAATCATTTAGTAAAA+TGG | - | chr8.1:39968011-39968030 | None:intergenic | 20.0% |
!! | ATTAACATGATTCTATTTCA+AGG | - | chr8.1:39966931-39966950 | None:intergenic | 20.0% |
!!! | TGATCAAATATTTTCTCAAA+AGG | + | chr8.1:39965946-39965965 | MS.gene009156:CDS | 20.0% |
!!! | TGATGTTTCTTTTTTATGTA+TGG | + | chr8.1:39967906-39967925 | MS.gene009156:intron | 20.0% |
! | AAAACACTGATATTTCATAC+TGG | + | chr8.1:39966311-39966330 | MS.gene009156:CDS | 25.0% |
! | AAAATGGCATTAACATTATG+AGG | - | chr8.1:39967995-39968014 | None:intergenic | 25.0% |
! | AAATACCTTACAGATTACAT+AGG | - | chr8.1:39967121-39967140 | None:intergenic | 25.0% |
! | AACAGAATAATCAAATTGTG+GGG | + | chr8.1:39966282-39966301 | MS.gene009156:CDS | 25.0% |
! | AATGTATTCACAATGAAAAC+AGG | - | chr8.1:39967056-39967075 | None:intergenic | 25.0% |
! | ATTTATCTTATCTCCAAAAC+GGG | + | chr8.1:39966144-39966163 | MS.gene009156:CDS | 25.0% |
! | CAACAGAATAATCAAATTGT+GGG | + | chr8.1:39966281-39966300 | MS.gene009156:CDS | 25.0% |
! | CCAAAAATAATGTCAGTATT+CGG | - | chr8.1:39968067-39968086 | None:intergenic | 25.0% |
! | GATTTATCTTATCTCCAAAA+CGG | + | chr8.1:39966143-39966162 | MS.gene009156:intron | 25.0% |
! | GGATTCAACAAAAGTAAAAT+AGG | - | chr8.1:39966910-39966929 | None:intergenic | 25.0% |
! | GTGAAATTAATTAACTACCT+GGG | - | chr8.1:39966046-39966065 | None:intergenic | 25.0% |
! | TCAACAGAATAATCAAATTG+TGG | + | chr8.1:39966280-39966299 | MS.gene009156:CDS | 25.0% |
! | TGTGAAATTAATTAACTACC+TGG | - | chr8.1:39966047-39966066 | None:intergenic | 25.0% |
! | TTGAAGCATAGATATTACAT+TGG | + | chr8.1:39966704-39966723 | MS.gene009156:intron | 25.0% |
!! | AAAAACAGCAAATCTCATTT+TGG | - | chr8.1:39966972-39966991 | None:intergenic | 25.0% |
!! | AAAACAGCAAATCTCATTTT+GGG | - | chr8.1:39966971-39966990 | None:intergenic | 25.0% |
!! | AATCTGTAAGGTATTTCAAA+AGG | + | chr8.1:39967125-39967144 | MS.gene009156:CDS | 25.0% |
!! | ACATTTTTAACAAGCTCTTT+TGG | + | chr8.1:39967071-39967090 | MS.gene009156:intron | 25.0% |
!!! | TTGTTTTACATGAATTTGCA+GGG | - | chr8.1:39967680-39967699 | None:intergenic | 25.0% |
AACCATTATATCCAATAGCA+TGG | - | chr8.1:39967308-39967327 | None:intergenic | 30.0% | |
AACTGATAAAGGAATTGTTC+AGG | + | chr8.1:39966400-39966419 | MS.gene009156:CDS | 30.0% | |
ACAAAACTATTAGATGTCAC+AGG | - | chr8.1:39967267-39967286 | None:intergenic | 30.0% | |
AGTAAAATAGGCACTTCATA+AGG | - | chr8.1:39966898-39966917 | None:intergenic | 30.0% | |
ATATGGGAAACCATTTAATG+AGG | + | chr8.1:39967176-39967195 | MS.gene009156:CDS | 30.0% | |
CTATTTGACATGAATTTGCA+GGG | - | chr8.1:39967470-39967489 | None:intergenic | 30.0% | |
CTGTTTGACATGAATTTGAA+GGG | - | chr8.1:39967554-39967573 | None:intergenic | 30.0% | |
CTTCAAATTCATGTCAAACA+GGG | + | chr8.1:39967553-39967572 | MS.gene009156:CDS | 30.0% | |
GAAAACAAAAAAACACGAGA+AGG | - | chr8.1:39967874-39967893 | None:intergenic | 30.0% | |
GAACAATTCCTTTATCAGTT+AGG | - | chr8.1:39966400-39966419 | None:intergenic | 30.0% | |
GATGATATGAATTATCCACA+GGG | - | chr8.1:39967722-39967741 | None:intergenic | 30.0% | |
TAAGTTAGCATCTTGATATG+TGG | + | chr8.1:39966559-39966578 | MS.gene009156:intron | 30.0% | |
TATTCACAATGAAAACAGGA+CGG | - | chr8.1:39967052-39967071 | None:intergenic | 30.0% | |
TGATGATATGAATTATCCAC+AGG | - | chr8.1:39967723-39967742 | None:intergenic | 30.0% | |
TTTATCTTATCTCCAAAACG+GGG | + | chr8.1:39966145-39966164 | MS.gene009156:CDS | 30.0% | |
! | AATTTTGCATGCACATGTAT+AGG | + | chr8.1:39966841-39966860 | MS.gene009156:intron | 30.0% |
! | CCGAATACTGACATTATTTT+TGG | + | chr8.1:39968064-39968083 | MS.gene009156:intron | 30.0% |
! | GGTTTGTCTTTTTAAATCAC+AGG | + | chr8.1:39967092-39967111 | MS.gene009156:intron | 30.0% |
! | TGTAAGGTATTTCAAAAGGA+AGG | + | chr8.1:39967129-39967148 | MS.gene009156:CDS | 30.0% |
! | TTAGTGTTTTCTACTCTTGT+AGG | + | chr8.1:39967931-39967950 | MS.gene009156:intron | 30.0% |
!! | TTTCTCAAAAGGAAAGTGTT+GGG | + | chr8.1:39965957-39965976 | MS.gene009156:CDS | 30.0% |
!! | TTTTCTCAAAAGGAAAGTGT+TGG | + | chr8.1:39965956-39965975 | MS.gene009156:CDS | 30.0% |
!!! | AACTGACTTTTTTGATGGTT+TGG | + | chr8.1:39968117-39968136 | MS.gene009156:CDS | 30.0% |
!!! | ACTGACTTTTTTGATGGTTT+GGG | + | chr8.1:39968118-39968137 | MS.gene009156:CDS | 30.0% |
!!! | CTATCAACTGACTTTTTTGA+TGG | + | chr8.1:39968112-39968131 | MS.gene009156:CDS | 30.0% |
!!! | CTCGTGTTTTTTTGTTTTCT+TGG | + | chr8.1:39967875-39967894 | MS.gene009156:intron | 30.0% |
!!! | CTGTTTTTACATGATGAAGT+TGG | + | chr8.1:39966984-39967003 | MS.gene009156:intron | 30.0% |
!!! | CTTGTTTTACATGAATTTGC+AGG | - | chr8.1:39967681-39967700 | None:intergenic | 30.0% |
!!! | GCATTTTAAAGTTTGAAGTG+TGG | + | chr8.1:39966787-39966806 | MS.gene009156:intron | 30.0% |
AAATTCACGTCAAACAGGAT+TGG | + | chr8.1:39967638-39967657 | MS.gene009156:CDS | 35.0% | |
AACCATTTAATGAGGAAGAC+TGG | + | chr8.1:39967184-39967203 | MS.gene009156:CDS | 35.0% | |
AATAGGCACTTCATAAGGTA+AGG | - | chr8.1:39966893-39966912 | None:intergenic | 35.0% | |
AATGCCATTAGTGACATAGT+AGG | - | chr8.1:39966744-39966763 | None:intergenic | 35.0% | |
ACATATACAAATACGCACCT+TGG | + | chr8.1:39966015-39966034 | MS.gene009156:CDS | 35.0% | |
AGCGACTCTTGATTTCTTTA+AGG | + | chr8.1:39968037-39968056 | MS.gene009156:intron | 35.0% | |
ATATGAATTATCCACAGGGT+CGG | - | chr8.1:39967718-39967737 | None:intergenic | 35.0% | |
ATTGGGTTATGCATGAGTAT+AGG | + | chr8.1:39966360-39966379 | MS.gene009156:CDS | 35.0% | |
CATATACAAATACGCACCTT+GGG | + | chr8.1:39966016-39966035 | MS.gene009156:CDS | 35.0% | |
CCTATTTGACATGAATTTGC+AGG | - | chr8.1:39967471-39967490 | None:intergenic | 35.0% | |
CCTATTTGACATTCATTTGC+AGG | - | chr8.1:39967597-39967616 | None:intergenic | 35.0% | |
CCTGCAAATGAATGTCAAAT+AGG | + | chr8.1:39967594-39967613 | MS.gene009156:CDS | 35.0% | |
CCTGCAAATTCATGTCAAAT+AGG | + | chr8.1:39967468-39967487 | MS.gene009156:CDS | 35.0% | |
CCTGTTTGACATGAATTTGA+AGG | - | chr8.1:39967555-39967574 | None:intergenic | 35.0% | |
CCTTCAAATTCATGTCAAAC+AGG | + | chr8.1:39967552-39967571 | MS.gene009156:CDS | 35.0% | |
CTCCATGCTATTGGATATAA+TGG | + | chr8.1:39967303-39967322 | MS.gene009156:CDS | 35.0% | |
CTGTTTGACATGAATTCACA+GGG | - | chr8.1:39967512-39967531 | None:intergenic | 35.0% | |
CTGTTTGACATGAATTTGCA+GGG | - | chr8.1:39967428-39967447 | None:intergenic | 35.0% | |
GATAAGGACCTAACTGATAA+AGG | + | chr8.1:39966389-39966408 | MS.gene009156:CDS | 35.0% | |
GGAGGATCAACAATATTTCA+AGG | - | chr8.1:39966872-39966891 | None:intergenic | 35.0% | |
GGATTCCTATGTAATCTGTA+AGG | + | chr8.1:39967113-39967132 | MS.gene009156:intron | 35.0% | |
TGAGTATAGGCTTGAAGATA+AGG | + | chr8.1:39966373-39966392 | MS.gene009156:CDS | 35.0% | |
TGTCAAACAGGATTACAAAC+AGG | + | chr8.1:39967384-39967403 | MS.gene009156:CDS | 35.0% | |
TGTTAATAATGATGACCCTG+TGG | + | chr8.1:39967746-39967765 | MS.gene009156:CDS | 35.0% | |
TTGACATGAATTTGAAGGGT+CGG | - | chr8.1:39967550-39967569 | None:intergenic | 35.0% | |
TTGACATTCATTTGCAGGAT+CGG | - | chr8.1:39967592-39967611 | None:intergenic | 35.0% | |
TTGATCAATTCAACTCCAGT+TGG | - | chr8.1:39965933-39965952 | None:intergenic | 35.0% | |
!! | AATGCTGACTTTAGCACATA+CGG | + | chr8.1:39968172-39968191 | MS.gene009156:CDS | 35.0% |
!! | ACTCTTAGTGTTGATGCTAT+TGG | + | chr8.1:39966632-39966651 | MS.gene009156:intron | 35.0% |
!! | TTCTCAAAAGGAAAGTGTTG+GGG | + | chr8.1:39965958-39965977 | MS.gene009156:CDS | 35.0% |
!! | TTGACATGAATTTGCTGGAT+CGG | - | chr8.1:39967370-39967389 | None:intergenic | 35.0% |
!!! | TACTGACATTATTTTTGGCC+AGG | + | chr8.1:39968069-39968088 | MS.gene009156:intron | 35.0% |
ATATCCATGCCATGTCAATC+AGG | + | chr8.1:39967330-39967349 | MS.gene009156:CDS | 40.0% | |
ATCCAATAGCATGGAGATTC+TGG | - | chr8.1:39967299-39967318 | None:intergenic | 40.0% | |
ATGAATCGATCTACGGAAAC+AGG | + | chr8.1:39966224-39966243 | MS.gene009156:CDS | 40.0% | |
ATGTGCTAAAGTCAGCATTC+TGG | - | chr8.1:39968171-39968190 | None:intergenic | 40.0% | |
ATTAGATGTCACAGGCAAAG+TGG | - | chr8.1:39967259-39967278 | None:intergenic | 40.0% | |
ATTGACCTCCTCTAAATGTG+GGG | + | chr8.1:39966761-39966780 | MS.gene009156:intron | 40.0% | |
CATTGACCTCCTCTAAATGT+GGG | + | chr8.1:39966760-39966779 | MS.gene009156:intron | 40.0% | |
CCAGCAAATTCATGTCAAAC+AGG | + | chr8.1:39967372-39967391 | MS.gene009156:CDS | 40.0% | |
CCTGCAAATTCATGTCAAAC+AGG | + | chr8.1:39967426-39967445 | MS.gene009156:CDS | 40.0% | |
CCTGTGAATTCATGTCAAAC+AGG | + | chr8.1:39967510-39967529 | MS.gene009156:CDS | 40.0% | |
CCTGTTTGACATGAATTCAC+AGG | - | chr8.1:39967513-39967532 | None:intergenic | 40.0% | |
CCTGTTTGACATGAATTTGC+AGG | - | chr8.1:39967375-39967394 | None:intergenic | 40.0% | |
CCTGTTTGACATGAATTTGC+TGG | - | chr8.1:39967375-39967394 | None:intergenic | 40.0% | |
CTCCAGTCTTCCTCATTAAA+TGG | - | chr8.1:39967189-39967208 | None:intergenic | 40.0% | |
CTGTTTGACGTGAATTTGCA+GGG | - | chr8.1:39967635-39967654 | None:intergenic | 40.0% | |
CTTCCATACTTCTTCCCTAT+CGG | - | chr8.1:39966194-39966213 | None:intergenic | 40.0% | |
GAAACAGATAAGCATACCTC+AGG | - | chr8.1:39967846-39967865 | None:intergenic | 40.0% | |
GGATGACTACTTGGATTTCA+TGG | + | chr8.1:39968210-39968229 | MS.gene009156:CDS | 40.0% | |
GGTATTTCTTCTGTCCGATA+GGG | + | chr8.1:39966177-39966196 | MS.gene009156:CDS | 40.0% | |
GTATTTCAAAAGGAAGGTCC+TGG | + | chr8.1:39967135-39967154 | MS.gene009156:CDS | 40.0% | |
TATGAATTATCCACAGGGTC+GGG | - | chr8.1:39967717-39967736 | None:intergenic | 40.0% | |
TCCACCTACTATGTCACTAA+TGG | + | chr8.1:39966737-39966756 | MS.gene009156:intron | 40.0% | |
TGAATCGATCTACGGAAACA+GGG | + | chr8.1:39966225-39966244 | MS.gene009156:CDS | 40.0% | |
TGACATGAATTTGAAGGGTC+GGG | - | chr8.1:39967549-39967568 | None:intergenic | 40.0% | |
TGACATGAATTTGCAGGGTA+GGG | - | chr8.1:39967465-39967484 | None:intergenic | 40.0% | |
TGACATTCATTTGCAGGATC+GGG | - | chr8.1:39967591-39967610 | None:intergenic | 40.0% | |
TGACTTTAGCACATACGGAA+TGG | + | chr8.1:39968177-39968196 | MS.gene009156:CDS | 40.0% | |
TGGTATTTCTTCTGTCCGAT+AGG | + | chr8.1:39966176-39966195 | MS.gene009156:CDS | 40.0% | |
TTAGATGTCACAGGCAAAGT+GGG | - | chr8.1:39967258-39967277 | None:intergenic | 40.0% | |
TTATCTCCAAAACGGGGATT+TGG | + | chr8.1:39966151-39966170 | MS.gene009156:CDS | 40.0% | |
TTGACATGAATTTGCAGGGT+AGG | - | chr8.1:39967424-39967443 | None:intergenic | 40.0% | |
TTGACATGAATTTGCAGGGT+CGG | - | chr8.1:39967424-39967443 | None:intergenic | 40.0% | |
! | ATAGGGAAGAAGTATGGAAG+TGG | + | chr8.1:39966194-39966213 | MS.gene009156:CDS | 40.0% |
! | TAGGGAAGAAGTATGGAAGT+GGG | + | chr8.1:39966195-39966214 | MS.gene009156:CDS | 40.0% |
!! | TGACATGAATTTGCTGGATC+GGG | - | chr8.1:39967369-39967388 | None:intergenic | 40.0% |
!! | TGTAGTTGCGCTTTTGATTG+TGG | + | chr8.1:39966588-39966607 | MS.gene009156:intron | 40.0% |
!!! | GTTTTGGAAAGCTACTGGTA+AGG | + | chr8.1:39966247-39966266 | MS.gene009156:CDS | 40.0% |
AATGCAACCCCCACATTTAG+AGG | - | chr8.1:39966772-39966791 | None:intergenic | 45.0% | |
AGGAGACAATGCAAACTGCA+GGG | - | chr8.1:39967975-39967994 | None:intergenic | 45.0% | |
AGGCACTTCATAAGGTAAGG+AGG | - | chr8.1:39966890-39966909 | None:intergenic | 45.0% | |
ATCTAGACTCCGAGATGTTC+TGG | + | chr8.1:39968242-39968261 | MS.gene009156:CDS | 45.0% | |
CAATCCTGATTGACATGGCA+TGG | - | chr8.1:39967337-39967356 | None:intergenic | 45.0% | |
CCAGGAATGGTGCACAATAT+GGG | + | chr8.1:39967160-39967179 | MS.gene009156:CDS | 45.0% | |
CCATATTGTGCACCATTCCT+GGG | - | chr8.1:39967162-39967181 | None:intergenic | 45.0% | |
CCTGCAAATTCACGTCAAAC+AGG | + | chr8.1:39967633-39967652 | MS.gene009156:CDS | 45.0% | |
CCTGTTTGACGTGAATTTGC+AGG | - | chr8.1:39967636-39967655 | None:intergenic | 45.0% | |
GAATTCACAGGGTCTACAGA+AGG | - | chr8.1:39967501-39967520 | None:intergenic | 45.0% | |
GACCAGAATCTCCATGCTAT+TGG | + | chr8.1:39967294-39967313 | MS.gene009156:CDS | 45.0% | |
GCCATTAGTGACATAGTAGG+TGG | - | chr8.1:39966741-39966760 | None:intergenic | 45.0% | |
GGCATCAATCCTGATTGACA+TGG | - | chr8.1:39967342-39967361 | None:intergenic | 45.0% | |
GTCGAGGATGAATCGATCTA+CGG | + | chr8.1:39966217-39966236 | MS.gene009156:CDS | 45.0% | |
TGACATGAATTTGCAGGGTC+GGG | - | chr8.1:39967423-39967442 | None:intergenic | 45.0% | |
TGTCCGATAGGGAAGAAGTA+TGG | + | chr8.1:39966188-39966207 | MS.gene009156:CDS | 45.0% | |
TTGACCTCCTCTAAATGTGG+GGG | + | chr8.1:39966762-39966781 | MS.gene009156:intron | 45.0% | |
TTGACGTGAATTTGCAGGGT+CGG | - | chr8.1:39967631-39967650 | None:intergenic | 45.0% | |
! | CACCTTCAGCATTGTTTTCC+TGG | - | chr8.1:39968090-39968109 | None:intergenic | 45.0% |
! | CTATACCGAAATTGGTTCCG+GGG | + | chr8.1:39965895-39965914 | MS.gene009156:CDS | 45.0% |
! | GACTGGAGTGATGATGAAGT+AGG | + | chr8.1:39967201-39967220 | MS.gene009156:CDS | 45.0% |
! | GATCTACGGAAACAGGGTTT+TGG | + | chr8.1:39966231-39966250 | MS.gene009156:CDS | 45.0% |
! | GCATTGACCTCCTCTAAATG+TGG | + | chr8.1:39966759-39966778 | MS.gene009156:intron | 45.0% |
! | GCTATACCGAAATTGGTTCC+GGG | + | chr8.1:39965894-39965913 | MS.gene009156:CDS | 45.0% |
! | GGCTATACCGAAATTGGTTC+CGG | + | chr8.1:39965893-39965912 | MS.gene009156:CDS | 45.0% |
!! | TTTTGATGGTTTGGGAGACC+TGG | + | chr8.1:39968126-39968145 | MS.gene009156:CDS | 45.0% |
!!! | ACAGGGTTTTGGAAAGCTAC+TGG | + | chr8.1:39966242-39966261 | MS.gene009156:CDS | 45.0% |
AAGTCAGCATTCTGGCCAAC+AGG | - | chr8.1:39968163-39968182 | None:intergenic | 50.0% | |
ACATACGGAATGGCTCCTAC+GGG | + | chr8.1:39968187-39968206 | MS.gene009156:CDS | 50.0% | |
ACATGAATTTGCAGGGCCAG+TGG | - | chr8.1:39967673-39967692 | None:intergenic | 50.0% | |
AGCACTCTGCCAGAACATCT+CGG | - | chr8.1:39968254-39968273 | None:intergenic | 50.0% | |
CACATACGGAATGGCTCCTA+CGG | + | chr8.1:39968186-39968205 | MS.gene009156:CDS | 50.0% | |
CATGAATTTGCAGGGCCAGT+GGG | - | chr8.1:39967672-39967691 | None:intergenic | 50.0% | |
CCCAGGAATGGTGCACAATA+TGG | + | chr8.1:39967159-39967178 | MS.gene009156:CDS | 50.0% | |
CCCATATTGTGCACCATTCC+TGG | - | chr8.1:39967163-39967182 | None:intergenic | 50.0% | |
CGAAACCCCGGAACCAATTT+CGG | - | chr8.1:39965903-39965922 | None:intergenic | 50.0% | |
GAATTTGAAGGGTCGGGAGA+CGG | - | chr8.1:39967543-39967562 | None:intergenic | 50.0% | |
GAATTTGCAGGGTAGGGAGA+AGG | - | chr8.1:39967459-39967478 | None:intergenic | 50.0% | |
GAGGAGACAATGCAAACTGC+AGG | - | chr8.1:39967976-39967995 | None:intergenic | 50.0% | |
GGAGACAATGCAAACTGCAG+GGG | - | chr8.1:39967974-39967993 | None:intergenic | 50.0% | |
GGCCAGGAAAACAATGCTGA+AGG | + | chr8.1:39968085-39968104 | MS.gene009156:intron | 50.0% | |
GGGTTTCGATTCTCTCCAAC+TGG | + | chr8.1:39965915-39965934 | MS.gene009156:CDS | 50.0% | |
GTTGGAGAGAATCGAAACCC+CGG | - | chr8.1:39965915-39965934 | None:intergenic | 50.0% | |
TAACTACCTGGGAGATCCCA+AGG | - | chr8.1:39966035-39966054 | None:intergenic | 50.0% | |
TCATTTGCAGGATCGGGAGA+CGG | - | chr8.1:39967585-39967604 | None:intergenic | 50.0% | |
TCCAAAACGGGGATTTGGAG+TGG | + | chr8.1:39966156-39966175 | MS.gene009156:CDS | 50.0% | |
TGACGTGAATTTGCAGGGTC+GGG | - | chr8.1:39967630-39967649 | None:intergenic | 50.0% | |
TTGGGAGACCTGGATTGCTT+GGG | + | chr8.1:39968136-39968155 | MS.gene009156:CDS | 50.0% | |
TTTGGGAGACCTGGATTGCT+TGG | + | chr8.1:39968135-39968154 | MS.gene009156:CDS | 50.0% | |
! | ACCACTCCAAATCCCCGTTT+TGG | - | chr8.1:39966160-39966179 | None:intergenic | 50.0% |
! | AGAAGTATGGAAGTGGGTCG+AGG | + | chr8.1:39966201-39966220 | MS.gene009156:CDS | 50.0% |
!! | CATACTGGAAAAGCACCTCG+TGG | + | chr8.1:39966326-39966345 | MS.gene009156:CDS | 50.0% |
!! | GAATTTGCTGGATCGGGAGA+AGG | - | chr8.1:39967363-39967382 | None:intergenic | 50.0% |
!! | TCGTGGTGATCGCACTGATT+GGG | + | chr8.1:39966343-39966362 | MS.gene009156:CDS | 50.0% |
AAAAGGAAGGTCCTGGTCCC+AGG | + | chr8.1:39967142-39967161 | MS.gene009156:CDS | 55.0% | |
AAAGTGGGAGCTAGTGCAGC+TGG | - | chr8.1:39967243-39967262 | None:intergenic | 55.0% | |
ATACGGAATGGCTCCTACGG+GGG | + | chr8.1:39968189-39968208 | MS.gene009156:CDS | 55.0% | |
CAACAGGTCCCAAGCAATCC+AGG | - | chr8.1:39968147-39968166 | None:intergenic | 55.0% | |
CAATCAGTGCGATCACCACG+AGG | - | chr8.1:39966344-39966363 | None:intergenic | 55.0% | |
CATACGGAATGGCTCCTACG+GGG | + | chr8.1:39968188-39968207 | MS.gene009156:CDS | 55.0% | |
CGACGACGACATATTGCCTG+AGG | + | chr8.1:39967827-39967846 | MS.gene009156:CDS | 55.0% | |
CTGGATTGCTTGGGACCTGT+TGG | + | chr8.1:39968145-39968164 | MS.gene009156:CDS | 55.0% | |
GAATTTGCAGGGTCGGGAGA+AGG | - | chr8.1:39967417-39967436 | None:intergenic | 55.0% | |
GCAACCCCCACATTTAGAGG+AGG | - | chr8.1:39966769-39966788 | None:intergenic | 55.0% | |
TCCAAGTAGTCATCCCCCGT+AGG | - | chr8.1:39968205-39968224 | None:intergenic | 55.0% | |
TCCTACGGGGGATGACTACT+TGG | + | chr8.1:39968201-39968220 | MS.gene009156:CDS | 55.0% | |
TTATCCACAGGGTCGGGAGA+AGG | - | chr8.1:39967711-39967730 | None:intergenic | 55.0% | |
TTTGCAGGGTAGGGAGAAGG+TGG | - | chr8.1:39967456-39967475 | None:intergenic | 55.0% | |
! | AGTGCAGCTGGCTCAGCAAA+TGG | - | chr8.1:39967231-39967250 | None:intergenic | 55.0% |
! | CTCGTGGTGATCGCACTGAT+TGG | + | chr8.1:39966342-39966361 | MS.gene009156:CDS | 55.0% |
! | GAGTGCTGCGGAACCTAAGT+TGG | + | chr8.1:39968267-39968286 | MS.gene009156:CDS | 55.0% |
!! | GATGTTCTGGCAGAGTGCTG+CGG | + | chr8.1:39968255-39968274 | MS.gene009156:CDS | 55.0% |
GAAGGTCCTGGTCCCAGGAA+TGG | + | chr8.1:39967147-39967166 | MS.gene009156:CDS | 60.0% | |
GGATTGGAGCTGTCTCCCAC+TGG | + | chr8.1:39967654-39967673 | MS.gene009156:CDS | 60.0% | |
TACGCACCTTGGGATCTCCC+AGG | + | chr8.1:39966026-39966045 | MS.gene009156:CDS | 60.0% | |
TGTGCACCATTCCTGGGACC+AGG | - | chr8.1:39967156-39967175 | None:intergenic | 60.0% | |
TTTGCAGGGTCGGGAGAAGG+CGG | - | chr8.1:39967414-39967433 | None:intergenic | 60.0% | |
GGTGCCTTCTCCCGACCCTG+TGG | + | chr8.1:39967704-39967723 | MS.gene009156:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.1 | gene | 39965891 | 39968300 | 39965891 | ID=MS.gene009156 |
chr8.1 | mRNA | 39965891 | 39968300 | 39965891 | ID=MS.gene009156.t1;Parent=MS.gene009156 |
chr8.1 | exon | 39965891 | 39966047 | 39965891 | ID=MS.gene009156.t1.exon1;Parent=MS.gene009156.t1 |
chr8.1 | CDS | 39965891 | 39966047 | 39965891 | ID=cds.MS.gene009156.t1;Parent=MS.gene009156.t1 |
chr8.1 | exon | 39966144 | 39966421 | 39966144 | ID=MS.gene009156.t1.exon2;Parent=MS.gene009156.t1 |
chr8.1 | CDS | 39966144 | 39966421 | 39966144 | ID=cds.MS.gene009156.t1;Parent=MS.gene009156.t1 |
chr8.1 | exon | 39967114 | 39967848 | 39967114 | ID=MS.gene009156.t1.exon3;Parent=MS.gene009156.t1 |
chr8.1 | CDS | 39967114 | 39967848 | 39967114 | ID=cds.MS.gene009156.t1;Parent=MS.gene009156.t1 |
chr8.1 | exon | 39968091 | 39968300 | 39968091 | ID=MS.gene009156.t1.exon4;Parent=MS.gene009156.t1 |
chr8.1 | CDS | 39968091 | 39968300 | 39968091 | ID=cds.MS.gene009156.t1;Parent=MS.gene009156.t1 |
Gene Sequence |
Protein sequence |