Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene009272.t1 | XP_024635892.1 | 83.7 | 239 | 29 | 1 | 22 | 260 | 188 | 416 | 3.20E-111 | 411.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene009272.t1 | Q8L3W1 | 28.8 | 340 | 146 | 10 | 8 | 260 | 10 | 340 | 3.7e-23 | 110.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene009272.t1 | G7IYE9 | 83.7 | 239 | 29 | 1 | 22 | 260 | 36 | 264 | 2.3e-111 | 411.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene009272.t1 | TF | B3 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene009272.t1 | MTR_3g005480 | 86.192 | 239 | 23 | 1 | 22 | 260 | 36 | 264 | 3.14e-154 | 430 |
| MS.gene009272.t1 | MTR_3g005490 | 79.253 | 241 | 39 | 2 | 22 | 262 | 36 | 265 | 8.45e-138 | 389 |
| MS.gene009272.t1 | MTR_5g070440 | 70.954 | 241 | 68 | 1 | 22 | 262 | 36 | 274 | 2.94e-124 | 355 |
| MS.gene009272.t1 | MTR_3g005420 | 66.805 | 241 | 78 | 1 | 22 | 262 | 304 | 542 | 1.09e-110 | 330 |
| MS.gene009272.t1 | MTR_3g005420 | 55.983 | 234 | 77 | 4 | 22 | 253 | 55 | 264 | 2.07e-73 | 233 |
| MS.gene009272.t1 | MTR_3g005460 | 63.968 | 247 | 83 | 2 | 22 | 262 | 277 | 523 | 3.47e-105 | 315 |
| MS.gene009272.t1 | MTR_3g005460 | 56.769 | 229 | 74 | 3 | 22 | 250 | 40 | 243 | 3.18e-78 | 245 |
| MS.gene009272.t1 | MTR_3g005420 | 55.602 | 241 | 70 | 2 | 22 | 262 | 285 | 488 | 9.11e-83 | 256 |
| MS.gene009272.t1 | MTR_3g005420 | 55.983 | 234 | 77 | 4 | 22 | 253 | 36 | 245 | 3.74e-74 | 234 |
| MS.gene009272.t1 | MTR_3g005440 | 63.731 | 193 | 63 | 1 | 22 | 214 | 257 | 442 | 8.51e-77 | 239 |
| MS.gene009272.t1 | MTR_3g005440 | 49.580 | 238 | 67 | 3 | 18 | 253 | 31 | 217 | 1.47e-62 | 202 |
| MS.gene009272.t1 | MTR_3g005495 | 53.086 | 243 | 81 | 4 | 18 | 259 | 24 | 234 | 2.28e-76 | 239 |
| MS.gene009272.t1 | MTR_3g005495 | 52.766 | 235 | 90 | 6 | 22 | 254 | 258 | 473 | 8.05e-71 | 225 |
| MS.gene009272.t1 | MTR_1g015350 | 40.984 | 183 | 34 | 4 | 50 | 232 | 58 | 166 | 6.48e-31 | 113 |
| MS.gene009272.t1 | MTR_7g050710 | 30.526 | 285 | 149 | 10 | 22 | 259 | 28 | 310 | 1.88e-27 | 108 |
| MS.gene009272.t1 | MTR_3g061310 | 30.175 | 285 | 165 | 9 | 2 | 255 | 4 | 285 | 1.44e-26 | 105 |
| MS.gene009272.t1 | MTR_3g098790 | 29.749 | 279 | 149 | 11 | 23 | 259 | 29 | 302 | 2.51e-25 | 102 |
| MS.gene009272.t1 | MTR_0152s0100 | 42.982 | 114 | 62 | 1 | 147 | 260 | 2 | 112 | 2.89e-25 | 97.1 |
| MS.gene009272.t1 | MTR_0152s0100 | 42.982 | 114 | 62 | 1 | 147 | 260 | 2 | 112 | 2.89e-25 | 97.1 |
| MS.gene009272.t1 | MTR_3g061370 | 30.038 | 263 | 152 | 6 | 22 | 255 | 22 | 281 | 6.95e-25 | 100 |
| MS.gene009272.t1 | MTR_3g061320 | 32.210 | 267 | 144 | 10 | 19 | 255 | 20 | 279 | 1.05e-24 | 99.8 |
| MS.gene009272.t1 | MTR_3g061340 | 30.566 | 265 | 146 | 9 | 19 | 255 | 20 | 274 | 1.15e-24 | 99.8 |
| MS.gene009272.t1 | MTR_3g061350 | 30.147 | 272 | 148 | 9 | 19 | 255 | 20 | 284 | 3.28e-24 | 98.6 |
| MS.gene009272.t1 | MTR_1g034240 | 48.810 | 84 | 43 | 0 | 22 | 105 | 22 | 105 | 8.41e-24 | 99.8 |
| MS.gene009272.t1 | MTR_1g034240 | 37.879 | 132 | 69 | 4 | 133 | 257 | 268 | 393 | 1.31e-16 | 79.3 |
| MS.gene009272.t1 | MTR_1g108780 | 27.148 | 291 | 150 | 8 | 20 | 257 | 10 | 291 | 9.86e-24 | 99.8 |
| MS.gene009272.t1 | MTR_7g050560 | 26.007 | 273 | 158 | 5 | 23 | 259 | 29 | 293 | 2.30e-23 | 97.1 |
| MS.gene009272.t1 | MTR_8g103940 | 25.658 | 304 | 158 | 9 | 8 | 257 | 43 | 332 | 6.49e-23 | 97.8 |
| MS.gene009272.t1 | MTR_7g050590 | 24.828 | 290 | 157 | 7 | 23 | 259 | 2 | 283 | 1.20e-21 | 92.0 |
| MS.gene009272.t1 | MTR_7g050580 | 27.612 | 268 | 160 | 8 | 23 | 259 | 29 | 293 | 6.86e-21 | 90.1 |
| MS.gene009272.t1 | MTR_5g044670 | 24.101 | 278 | 167 | 6 | 23 | 259 | 32 | 306 | 9.32e-21 | 90.1 |
| MS.gene009272.t1 | MTR_1g035460 | 26.689 | 296 | 147 | 8 | 23 | 257 | 2 | 288 | 1.39e-20 | 90.5 |
| MS.gene009272.t1 | MTR_4g068320 | 38.835 | 103 | 62 | 1 | 4 | 105 | 2 | 104 | 5.79e-20 | 89.0 |
| MS.gene009272.t1 | MTR_4g068320 | 38.060 | 134 | 70 | 4 | 133 | 259 | 264 | 391 | 2.97e-17 | 80.9 |
| MS.gene009272.t1 | MTR_1g034210 | 49.333 | 75 | 38 | 0 | 22 | 96 | 22 | 96 | 7.73e-19 | 84.7 |
| MS.gene009272.t1 | MTR_1g034210 | 49.333 | 75 | 38 | 0 | 22 | 96 | 22 | 96 | 1.52e-18 | 84.3 |
| MS.gene009272.t1 | MTR_1g034210 | 35.484 | 124 | 67 | 4 | 141 | 257 | 242 | 359 | 1.83e-12 | 66.6 |
| MS.gene009272.t1 | MTR_3g061330 | 29.825 | 171 | 91 | 3 | 22 | 165 | 25 | 193 | 1.00e-17 | 80.5 |
| MS.gene009272.t1 | MTR_3g061290 | 41.509 | 106 | 59 | 2 | 19 | 122 | 20 | 124 | 1.03e-17 | 79.3 |
| MS.gene009272.t1 | MTR_7g050720 | 34.737 | 95 | 62 | 0 | 23 | 117 | 26 | 120 | 5.52e-15 | 73.9 |
| MS.gene009272.t1 | MTR_3g061220 | 37.736 | 106 | 50 | 3 | 2 | 105 | 4 | 95 | 2.38e-14 | 68.2 |
| MS.gene009272.t1 | MTR_7g050640 | 34.375 | 96 | 63 | 0 | 12 | 107 | 18 | 113 | 8.30e-14 | 66.6 |
| MS.gene009272.t1 | MTR_6g061070 | 23.288 | 292 | 161 | 8 | 23 | 255 | 34 | 321 | 1.76e-12 | 67.0 |
| MS.gene009272.t1 | MTR_4g119990 | 25.091 | 275 | 145 | 11 | 22 | 242 | 30 | 297 | 5.78e-12 | 65.5 |
| MS.gene009272.t1 | MTR_1g035510 | 30.612 | 98 | 65 | 2 | 23 | 120 | 2 | 96 | 4.05e-11 | 61.6 |
| MS.gene009272.t1 | MTR_1g035520 | 33.654 | 104 | 66 | 2 | 2 | 105 | 67 | 167 | 9.85e-11 | 61.6 |
| MS.gene009272.t1 | MTR_1g021290 | 38.202 | 89 | 54 | 1 | 12 | 100 | 33 | 120 | 9.85e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene009272.t1 | AT3G18990 | 44.898 | 98 | 51 | 1 | 8 | 105 | 10 | 104 | 2.54e-21 | 91.7 |
| MS.gene009272.t1 | AT3G18990 | 37.037 | 135 | 73 | 4 | 133 | 261 | 213 | 341 | 5.64e-16 | 77.0 |
| MS.gene009272.t1 | AT3G18990 | 44.898 | 98 | 51 | 1 | 8 | 105 | 10 | 104 | 5.11e-21 | 91.3 |
| MS.gene009272.t1 | AT3G18990 | 36.765 | 136 | 74 | 4 | 133 | 262 | 213 | 342 | 1.32e-15 | 75.9 |
| MS.gene009272.t1 | AT1G49475 | 40.625 | 96 | 56 | 1 | 20 | 115 | 47 | 141 | 1.75e-18 | 81.3 |
| MS.gene009272.t1 | AT3G18960 | 40.000 | 90 | 54 | 0 | 21 | 110 | 7 | 96 | 5.50e-18 | 79.3 |
| MS.gene009272.t1 | AT3G18960 | 38.542 | 96 | 56 | 1 | 12 | 107 | 38 | 130 | 7.31e-18 | 79.7 |
| MS.gene009272.t1 | AT4G01580 | 37.374 | 99 | 59 | 1 | 12 | 110 | 38 | 133 | 8.88e-18 | 79.3 |
| MS.gene009272.t1 | AT3G18960 | 38.542 | 96 | 56 | 1 | 12 | 107 | 38 | 130 | 1.05e-17 | 79.7 |
| MS.gene009272.t1 | AT1G49480 | 37.037 | 135 | 73 | 4 | 133 | 261 | 98 | 226 | 1.92e-16 | 76.6 |
| MS.gene009272.t1 | AT1G49480 | 37.037 | 135 | 73 | 4 | 133 | 261 | 98 | 226 | 1.92e-16 | 76.6 |
| MS.gene009272.t1 | AT1G49480 | 37.037 | 135 | 73 | 4 | 133 | 261 | 98 | 226 | 1.92e-16 | 76.6 |
Find 39 sgRNAs with CRISPR-Local
Find 57 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATAATTTCCCATTAGAATTT+TGG | 0.142530 | 3.2:+37279 | None:intergenic |
| ACTGCTCTCCTTGAGAATTT+TGG | 0.150373 | 3.2:+37119 | None:intergenic |
| AAGTGAGAGTCATGAGAAAA+AGG | 0.253305 | 3.2:-37383 | MS.gene009272:CDS |
| TTTGCAGAATACTATTCTAT+AGG | 0.313465 | 3.2:-37571 | MS.gene009272:CDS |
| CATTGCAGATGATGATGATT+TGG | 0.324669 | 3.2:+37069 | None:intergenic |
| TTGCAGAATACTATTCTATA+GGG | 0.341018 | 3.2:-37570 | MS.gene009272:CDS |
| TGGAGCTTTATAGGAACATT+TGG | 0.361401 | 3.2:+37139 | None:intergenic |
| TTCCTGTGTTTCAAATATGA+AGG | 0.394296 | 3.2:-37538 | MS.gene009272:CDS |
| TTCAAAACTCTAAGTACAAA+TGG | 0.425055 | 3.2:-37457 | MS.gene009272:CDS |
| GTCAGCCCTCCTCTAAAATT+CGG | 0.439993 | 3.2:-37771 | MS.gene009272:CDS |
| GGGATTTACTGTATTTCAAA+GGG | 0.445823 | 3.2:-37035 | MS.gene009272:CDS |
| CTGTTCCTGATGGTCGTGAT+TGG | 0.459514 | 3.2:-37651 | MS.gene009272:CDS |
| CAGTTCATCCGTTATAGTAT+AGG | 0.459617 | 3.2:+37747 | None:intergenic |
| ACTCTCACTTGTTTCAACCT+TGG | 0.466400 | 3.2:+37396 | None:intergenic |
| CATCTGCAATGATAATATCA+AGG | 0.473557 | 3.2:-37057 | MS.gene009272:CDS |
| GGGGATTTACTGTATTTCAA+AGG | 0.481017 | 3.2:-37036 | MS.gene009272:CDS |
| ATTTCCCAATCACGACCATC+AGG | 0.484720 | 3.2:+37646 | None:intergenic |
| AGTGTCATAGTCGTAGAAAA+AGG | 0.486595 | 3.2:-37420 | MS.gene009272:CDS |
| TGATGGTCGTGATTGGGAAA+TGG | 0.490310 | 3.2:-37644 | MS.gene009272:CDS |
| TGTTCCTGATGGTCGTGATT+GGG | 0.496959 | 3.2:-37650 | MS.gene009272:CDS |
| AATTCTAATGGGAAATTATG+TGG | 0.499901 | 3.2:-37275 | MS.gene009272:intron |
| CCCCTTCATATTTGAAACAC+AGG | 0.508323 | 3.2:+37536 | None:intergenic |
| AATTCGGTCCTATACTATAA+CGG | 0.516718 | 3.2:-37755 | MS.gene009272:CDS |
| GAATACTATTCTATAGGGTA+TGG | 0.523564 | 3.2:-37565 | MS.gene009272:CDS |
| TCCTGTGTTTCAAATATGAA+GGG | 0.529278 | 3.2:-37537 | MS.gene009272:CDS |
| AGGGGCAACAATCTGTCTCA+TGG | 0.538258 | 3.2:-37016 | MS.gene009272:CDS |
| AATGTGCAGTATGTTAATGC+TGG | 0.551027 | 3.2:-37184 | MS.gene009272:intron |
| ATCTGCAATGATAATATCAA+GGG | 0.551519 | 3.2:-37056 | MS.gene009272:CDS |
| ATAAAGCTCCAAAATTCTCA+AGG | 0.564100 | 3.2:-37127 | MS.gene009272:CDS |
| CCTGTGTTTCAAATATGAAG+GGG | 0.591078 | 3.2:-37536 | MS.gene009272:CDS |
| TGAGCTGATCAATAAGAAGC+CGG | 0.592920 | 3.2:-36978 | MS.gene009272:CDS |
| AAATTCTCAAGGAGAGCAGT+GGG | 0.598086 | 3.2:-37116 | MS.gene009272:CDS |
| AAAATTCTCAAGGAGAGCAG+TGG | 0.599450 | 3.2:-37117 | MS.gene009272:CDS |
| ACATGCTTCTGAAAGAGCAA+AGG | 0.603971 | 3.2:-37344 | MS.gene009272:CDS |
| TTCATATTTGAAACACAGGA+AGG | 0.623348 | 3.2:+37540 | None:intergenic |
| GCTACAATTACTGTTCCTGA+TGG | 0.638622 | 3.2:-37661 | MS.gene009272:CDS |
| GGATTTACTGTATTTCAAAG+GGG | 0.674995 | 3.2:-37034 | MS.gene009272:CDS |
| GAAATGGAACTGAAGAAATG+CGG | 0.682734 | 3.2:-37628 | MS.gene009272:CDS |
| TCTGCAATGATAATATCAAG+GGG | 0.693916 | 3.2:-37055 | MS.gene009272:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GATGAGTTTATAAAAAGATT+TGG | - | chr3.2:37003-37022 | MS.gene009272:CDS | 20.0% |
| !!! | AATCTTTTTATAAACTCATC+TGG | + | chr3.2:37003-37022 | None:intergenic | 20.0% |
| !!! | ACATTTACTTTTGTAACAAA+TGG | - | chr3.2:37106-37125 | MS.gene009272:CDS | 20.0% |
| !!! | AGAATTTTGGAACAAAAATA+AGG | + | chr3.2:37417-37436 | None:intergenic | 20.0% |
| !!! | ATAATTTCCCATTAGAATTT+TGG | + | chr3.2:37430-37449 | None:intergenic | 20.0% |
| !!! | GAATTTTGGAACAAAAATAA+GGG | + | chr3.2:37416-37435 | None:intergenic | 20.0% |
| !!! | GTTTTTTGGATTAAATTCTT+TGG | + | chr3.2:37394-37413 | None:intergenic | 20.0% |
| !!! | TTTTGTTCCAAAATTCTAAT+GGG | - | chr3.2:37420-37439 | MS.gene009272:CDS | 20.0% |
| !!! | TTTTTGTTCCAAAATTCTAA+TGG | - | chr3.2:37419-37438 | MS.gene009272:CDS | 20.0% |
| ! | AATTCTAATGGGAAATTATG+TGG | - | chr3.2:37431-37450 | MS.gene009272:CDS | 25.0% |
| ! | ATCTGCAATGATAATATCAA+GGG | - | chr3.2:37650-37669 | MS.gene009272:CDS | 25.0% |
| ! | TTCAAAACTCTAAGTACAAA+TGG | - | chr3.2:37249-37268 | MS.gene009272:intron | 25.0% |
| ! | TTGCAGAATACTATTCTATA+GGG | - | chr3.2:37136-37155 | MS.gene009272:CDS | 25.0% |
| ! | TTTGCAGAATACTATTCTAT+AGG | - | chr3.2:37135-37154 | MS.gene009272:CDS | 25.0% |
| !!! | GAACAAAAATAAGGGTTTTT+TGG | + | chr3.2:37408-37427 | None:intergenic | 25.0% |
| !!! | TTTGTACTTAGAGTTTTGAA+TGG | + | chr3.2:37249-37268 | None:intergenic | 25.0% |
| AATTCGGTCCTATACTATAA+CGG | - | chr3.2:36951-36970 | MS.gene009272:CDS | 30.0% | |
| ATAAAGCTCCAAAATTCTCA+AGG | - | chr3.2:37579-37598 | MS.gene009272:CDS | 30.0% | |
| CATCTGCAATGATAATATCA+AGG | - | chr3.2:37649-37668 | MS.gene009272:CDS | 30.0% | |
| GAATACTATTCTATAGGGTA+TGG | - | chr3.2:37141-37160 | MS.gene009272:CDS | 30.0% | |
| GGATTTACTGTATTTCAAAG+GGG | - | chr3.2:37672-37691 | MS.gene009272:CDS | 30.0% | |
| GGGATTTACTGTATTTCAAA+GGG | - | chr3.2:37671-37690 | MS.gene009272:CDS | 30.0% | |
| TCCTGTGTTTCAAATATGAA+GGG | - | chr3.2:37169-37188 | MS.gene009272:CDS | 30.0% | |
| TCTGCAATGATAATATCAAG+GGG | - | chr3.2:37651-37670 | MS.gene009272:CDS | 30.0% | |
| TTCCTGTGTTTCAAATATGA+AGG | - | chr3.2:37168-37187 | MS.gene009272:CDS | 30.0% | |
| ! | TTCATATTTGAAACACAGGA+AGG | + | chr3.2:37169-37188 | None:intergenic | 30.0% |
| !!! | TGAGAATTTTGGAGCTTTAT+AGG | + | chr3.2:37579-37598 | None:intergenic | 30.0% |
| AAGTGAGAGTCATGAGAAAA+AGG | - | chr3.2:37323-37342 | MS.gene009272:CDS | 35.0% | |
| AATGTGCAGTATGTTAATGC+TGG | - | chr3.2:37522-37541 | MS.gene009272:CDS | 35.0% | |
| AGTGAGAGTCATGAGAAAAA+GGG | - | chr3.2:37324-37343 | MS.gene009272:CDS | 35.0% | |
| AGTGTCATAGTCGTAGAAAA+AGG | - | chr3.2:37286-37305 | MS.gene009272:CDS | 35.0% | |
| CAGTTCATCCGTTATAGTAT+AGG | + | chr3.2:36962-36981 | None:intergenic | 35.0% | |
| CCTGTGTTTCAAATATGAAG+GGG | - | chr3.2:37170-37189 | MS.gene009272:CDS | 35.0% | |
| GAAATGGAACTGAAGAAATG+CGG | - | chr3.2:37078-37097 | MS.gene009272:CDS | 35.0% | |
| GGGGATTTACTGTATTTCAA+AGG | - | chr3.2:37670-37689 | MS.gene009272:CDS | 35.0% | |
| TAATGGGAAATTATGTGGTG+AGG | - | chr3.2:37436-37455 | MS.gene009272:CDS | 35.0% | |
| ! | AGTATAGGACCGAATTTTAG+AGG | + | chr3.2:36947-36966 | None:intergenic | 35.0% |
| ! | ATTGTGACTTTTAGCACATC+CGG | + | chr3.2:37750-37769 | None:intergenic | 35.0% |
| ! | CATTGCAGATGATGATGATT+TGG | + | chr3.2:37640-37659 | None:intergenic | 35.0% |
| ! | TGGAGCTTTATAGGAACATT+TGG | + | chr3.2:37570-37589 | None:intergenic | 35.0% |
| AAAATTCTCAAGGAGAGCAG+TGG | - | chr3.2:37589-37608 | MS.gene009272:CDS | 40.0% | |
| AAATTCTCAAGGAGAGCAGT+GGG | - | chr3.2:37590-37609 | MS.gene009272:CDS | 40.0% | |
| ACTCTCACTTGTTTCAACCT+TGG | + | chr3.2:37313-37332 | None:intergenic | 40.0% | |
| GCTACAATTACTGTTCCTGA+TGG | - | chr3.2:37045-37064 | MS.gene009272:CDS | 40.0% | |
| TAGTCGTAGAAAAAGGTCCA+AGG | - | chr3.2:37293-37312 | MS.gene009272:CDS | 40.0% | |
| TGAGCTGATCAATAAGAAGC+CGG | - | chr3.2:37728-37747 | MS.gene009272:CDS | 40.0% | |
| ! | ACATGCTTCTGAAAGAGCAA+AGG | - | chr3.2:37362-37381 | MS.gene009272:CDS | 40.0% |
| ! | ACTGCTCTCCTTGAGAATTT+TGG | + | chr3.2:37590-37609 | None:intergenic | 40.0% |
| ! | CCCCTTCATATTTGAAACAC+AGG | + | chr3.2:37173-37192 | None:intergenic | 40.0% |
| !! | ATAGGACCGAATTTTAGAGG+AGG | + | chr3.2:36944-36963 | None:intergenic | 40.0% |
| !! | TAGGACCGAATTTTAGAGGA+GGG | + | chr3.2:36943-36962 | None:intergenic | 40.0% |
| ATTTCCCAATCACGACCATC+AGG | + | chr3.2:37063-37082 | None:intergenic | 45.0% | |
| TGATGGTCGTGATTGGGAAA+TGG | - | chr3.2:37062-37081 | MS.gene009272:CDS | 45.0% | |
| TGTTCCTGATGGTCGTGATT+GGG | - | chr3.2:37056-37075 | MS.gene009272:CDS | 45.0% | |
| !! | GTCAGCCCTCCTCTAAAATT+CGG | - | chr3.2:36935-36954 | MS.gene009272:CDS | 45.0% |
| AGGGGCAACAATCTGTCTCA+TGG | - | chr3.2:37690-37709 | MS.gene009272:CDS | 50.0% | |
| CTGTTCCTGATGGTCGTGAT+TGG | - | chr3.2:37055-37074 | MS.gene009272:CDS | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 36931 | 37797 | 36931 | ID=MS.gene009272 |
| chr3.2 | mRNA | 36931 | 37797 | 36931 | ID=MS.gene009272.t1;Parent=MS.gene009272 |
| chr3.2 | exon | 37276 | 37797 | 37276 | ID=MS.gene009272.t1.exon1;Parent=MS.gene009272.t1 |
| chr3.2 | CDS | 37276 | 37797 | 37276 | ID=cds.MS.gene009272.t1;Parent=MS.gene009272.t1 |
| chr3.2 | exon | 36931 | 37197 | 36931 | ID=MS.gene009272.t1.exon2;Parent=MS.gene009272.t1 |
| chr3.2 | CDS | 36931 | 37197 | 36931 | ID=cds.MS.gene009272.t1;Parent=MS.gene009272.t1 |
| Gene Sequence |
| Protein sequence |
