Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene009540.t1 | XP_003616168.1 | 87.7 | 651 | 73 | 1 | 1 | 651 | 1 | 644 | 0.00E+00 | 1145.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene009540.t1 | A4VCM0 | 39.2 | 566 | 235 | 19 | 1 | 558 | 1 | 465 | 1.8e-87 | 325.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene009540.t1 | G7KFT9 | 87.7 | 651 | 73 | 1 | 1 | 651 | 1 | 644 | 0.0e+00 | 1145.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene009540.t1 | TF | NAC |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene009540.t1 | MTR_5g076850 | 91.091 | 651 | 51 | 1 | 1 | 651 | 1 | 644 | 0.0 | 1244 |
MS.gene009540.t1 | MTR_3g064580 | 64.190 | 673 | 212 | 19 | 1 | 650 | 1 | 667 | 0.0 | 808 |
MS.gene009540.t1 | MTR_6g477900 | 74.375 | 160 | 41 | 0 | 1 | 160 | 1 | 160 | 1.58e-85 | 268 |
MS.gene009540.t1 | MTR_2g064090 | 74.545 | 165 | 41 | 1 | 1 | 164 | 1 | 165 | 2.06e-85 | 271 |
MS.gene009540.t1 | MTR_5g014300 | 64.417 | 163 | 48 | 2 | 1 | 156 | 1 | 160 | 1.77e-67 | 224 |
MS.gene009540.t1 | MTR_4g098630 | 61.635 | 159 | 58 | 1 | 1 | 156 | 1 | 159 | 2.70e-64 | 215 |
MS.gene009540.t1 | MTR_1g097300 | 61.728 | 162 | 61 | 1 | 8 | 169 | 21 | 181 | 1.75e-60 | 212 |
MS.gene009540.t1 | MTR_2g079990 | 56.329 | 158 | 67 | 1 | 1 | 158 | 11 | 166 | 7.50e-60 | 204 |
MS.gene009540.t1 | MTR_8g076110 | 48.352 | 182 | 89 | 3 | 1 | 180 | 1 | 179 | 1.08e-58 | 200 |
MS.gene009540.t1 | MTR_8g059170 | 57.500 | 160 | 64 | 2 | 1 | 158 | 9 | 166 | 1.94e-58 | 200 |
MS.gene009540.t1 | MTR_3g093040 | 57.325 | 157 | 67 | 0 | 1 | 157 | 103 | 259 | 1.99e-58 | 199 |
MS.gene009540.t1 | MTR_4g035590 | 48.691 | 191 | 88 | 4 | 5 | 192 | 7 | 190 | 3.48e-58 | 200 |
MS.gene009540.t1 | MTR_5g069030 | 61.589 | 151 | 58 | 0 | 6 | 156 | 25 | 175 | 4.23e-57 | 204 |
MS.gene009540.t1 | MTR_1g096430 | 56.494 | 154 | 64 | 2 | 6 | 158 | 7 | 158 | 7.26e-57 | 196 |
MS.gene009540.t1 | MTR_3g093050 | 60.131 | 153 | 61 | 0 | 5 | 157 | 21 | 173 | 2.66e-56 | 201 |
MS.gene009540.t1 | MTR_3g093050 | 60.131 | 153 | 61 | 0 | 5 | 157 | 21 | 173 | 4.35e-56 | 201 |
MS.gene009540.t1 | MTR_2g079990 | 62.406 | 133 | 48 | 1 | 1 | 133 | 11 | 141 | 6.59e-56 | 195 |
MS.gene009540.t1 | MTR_3g096140 | 53.086 | 162 | 75 | 1 | 8 | 169 | 9 | 169 | 8.21e-56 | 191 |
MS.gene009540.t1 | MTR_3g088110 | 57.500 | 160 | 62 | 4 | 4 | 160 | 5 | 161 | 9.90e-56 | 191 |
MS.gene009540.t1 | MTR_5g021710 | 52.903 | 155 | 70 | 2 | 6 | 159 | 8 | 160 | 1.73e-55 | 192 |
MS.gene009540.t1 | MTR_4g101680 | 52.500 | 160 | 73 | 2 | 6 | 164 | 7 | 164 | 3.01e-55 | 192 |
MS.gene009540.t1 | MTR_3g096140 | 53.086 | 162 | 75 | 1 | 8 | 169 | 9 | 169 | 6.70e-55 | 191 |
MS.gene009540.t1 | MTR_6g084430 | 57.895 | 152 | 60 | 2 | 6 | 157 | 5 | 152 | 8.36e-55 | 190 |
MS.gene009540.t1 | MTR_4g036030 | 48.000 | 175 | 88 | 3 | 6 | 179 | 7 | 179 | 9.77e-55 | 190 |
MS.gene009540.t1 | MTR_0036s0150 | 57.669 | 163 | 66 | 3 | 8 | 169 | 7 | 167 | 1.12e-54 | 196 |
MS.gene009540.t1 | MTR_8g063550 | 52.071 | 169 | 80 | 1 | 1 | 169 | 1 | 168 | 2.19e-54 | 189 |
MS.gene009540.t1 | MTR_8g063550 | 52.071 | 169 | 80 | 1 | 1 | 169 | 1 | 168 | 4.42e-54 | 191 |
MS.gene009540.t1 | MTR_8g063550 | 52.071 | 169 | 80 | 1 | 1 | 169 | 1 | 168 | 4.59e-54 | 191 |
MS.gene009540.t1 | MTR_1g090720 | 57.558 | 172 | 66 | 3 | 4 | 169 | 40 | 210 | 5.75e-54 | 192 |
MS.gene009540.t1 | MTR_5g012080 | 54.902 | 153 | 66 | 3 | 6 | 156 | 7 | 158 | 5.81e-54 | 188 |
MS.gene009540.t1 | MTR_2g080010 | 54.491 | 167 | 61 | 4 | 6 | 159 | 15 | 179 | 8.38e-54 | 188 |
MS.gene009540.t1 | MTR_4g081870 | 54.088 | 159 | 67 | 2 | 2 | 156 | 5 | 161 | 1.13e-53 | 185 |
MS.gene009540.t1 | MTR_2g062730 | 52.903 | 155 | 69 | 3 | 4 | 156 | 8 | 160 | 1.14e-53 | 187 |
MS.gene009540.t1 | MTR_1g090723 | 56.442 | 163 | 68 | 3 | 8 | 169 | 10 | 170 | 1.26e-53 | 194 |
MS.gene009540.t1 | MTR_7g085220 | 50.877 | 171 | 69 | 3 | 4 | 161 | 6 | 174 | 1.62e-53 | 187 |
MS.gene009540.t1 | MTR_1g090723 | 56.442 | 163 | 68 | 3 | 8 | 169 | 10 | 170 | 2.53e-53 | 194 |
MS.gene009540.t1 | MTR_8g094580 | 47.317 | 205 | 86 | 6 | 4 | 189 | 5 | 206 | 3.43e-53 | 184 |
MS.gene009540.t1 | MTR_2157s0010 | 52.439 | 164 | 64 | 3 | 6 | 157 | 8 | 169 | 3.99e-53 | 183 |
MS.gene009540.t1 | MTR_1g090723 | 55.215 | 163 | 71 | 2 | 8 | 169 | 10 | 171 | 4.70e-53 | 193 |
MS.gene009540.t1 | MTR_5g041940 | 52.500 | 160 | 70 | 2 | 4 | 159 | 1 | 158 | 3.12e-52 | 181 |
MS.gene009540.t1 | MTR_4g108760 | 53.165 | 158 | 70 | 3 | 4 | 159 | 15 | 170 | 3.71e-52 | 184 |
MS.gene009540.t1 | MTR_1g008740 | 56.410 | 156 | 62 | 4 | 5 | 157 | 12 | 164 | 3.92e-52 | 183 |
MS.gene009540.t1 | MTR_1g008740 | 56.410 | 156 | 62 | 4 | 5 | 157 | 26 | 178 | 4.76e-52 | 184 |
MS.gene009540.t1 | MTR_7g005280 | 56.774 | 155 | 58 | 4 | 4 | 156 | 13 | 160 | 5.76e-52 | 180 |
MS.gene009540.t1 | MTR_2g078700 | 57.051 | 156 | 61 | 3 | 6 | 157 | 23 | 176 | 5.88e-52 | 184 |
MS.gene009540.t1 | MTR_6g012670 | 53.416 | 161 | 61 | 3 | 6 | 159 | 20 | 173 | 7.02e-52 | 182 |
MS.gene009540.t1 | MTR_3g096920 | 52.000 | 175 | 71 | 5 | 4 | 168 | 5 | 176 | 1.38e-51 | 180 |
MS.gene009540.t1 | MTR_3g109340 | 54.839 | 155 | 65 | 3 | 5 | 157 | 21 | 172 | 1.95e-51 | 182 |
MS.gene009540.t1 | MTR_8g024480 | 49.693 | 163 | 68 | 3 | 6 | 156 | 15 | 175 | 2.17e-51 | 184 |
MS.gene009540.t1 | MTR_3g435150 | 55.195 | 154 | 65 | 3 | 6 | 157 | 16 | 167 | 2.30e-51 | 180 |
MS.gene009540.t1 | MTR_2g086880 | 53.595 | 153 | 63 | 2 | 1 | 153 | 13 | 157 | 2.68e-51 | 186 |
MS.gene009540.t1 | MTR_2g086880 | 54.248 | 153 | 62 | 3 | 1 | 153 | 13 | 157 | 4.46e-51 | 186 |
MS.gene009540.t1 | MTR_6g032770 | 49.398 | 166 | 78 | 3 | 3 | 164 | 15 | 178 | 4.69e-51 | 181 |
MS.gene009540.t1 | MTR_8g093580 | 49.112 | 169 | 85 | 1 | 1 | 169 | 1 | 168 | 6.59e-51 | 184 |
MS.gene009540.t1 | MTR_4g089135 | 42.105 | 247 | 107 | 6 | 6 | 224 | 15 | 253 | 7.77e-51 | 180 |
MS.gene009540.t1 | MTR_3g109340 | 54.194 | 155 | 65 | 3 | 5 | 157 | 21 | 171 | 1.20e-50 | 180 |
MS.gene009540.t1 | MTR_7g085260 | 51.534 | 163 | 71 | 4 | 4 | 160 | 15 | 175 | 2.96e-50 | 179 |
MS.gene009540.t1 | MTR_2g093810 | 53.165 | 158 | 66 | 4 | 5 | 156 | 13 | 168 | 1.21e-49 | 176 |
MS.gene009540.t1 | MTR_6g011860 | 50.000 | 162 | 69 | 3 | 6 | 157 | 15 | 174 | 1.25e-49 | 178 |
MS.gene009540.t1 | MTR_3g070030 | 43.182 | 220 | 103 | 4 | 4 | 220 | 17 | 217 | 1.55e-49 | 176 |
MS.gene009540.t1 | MTR_3g096920 | 60.769 | 130 | 48 | 2 | 4 | 133 | 5 | 131 | 2.65e-49 | 175 |
MS.gene009540.t1 | MTR_7g100990 | 50.314 | 159 | 71 | 4 | 4 | 156 | 9 | 165 | 6.92e-49 | 174 |
MS.gene009540.t1 | MTR_4g134460 | 52.288 | 153 | 68 | 3 | 8 | 159 | 56 | 204 | 2.39e-48 | 176 |
MS.gene009540.t1 | MTR_1g069805 | 54.140 | 157 | 60 | 4 | 4 | 156 | 8 | 156 | 3.69e-48 | 170 |
MS.gene009540.t1 | MTR_7g097090 | 55.556 | 153 | 60 | 4 | 4 | 154 | 8 | 154 | 2.63e-47 | 169 |
MS.gene009540.t1 | MTR_2g064470 | 49.143 | 175 | 81 | 5 | 1 | 171 | 6 | 176 | 2.76e-47 | 169 |
MS.gene009540.t1 | MTR_8g467490 | 46.584 | 161 | 73 | 3 | 8 | 157 | 16 | 174 | 9.89e-47 | 170 |
MS.gene009540.t1 | MTR_5g040420 | 46.250 | 160 | 74 | 3 | 8 | 157 | 16 | 173 | 4.15e-46 | 168 |
MS.gene009540.t1 | MTR_3g096140 | 50.000 | 148 | 73 | 1 | 22 | 169 | 2 | 148 | 1.56e-45 | 165 |
MS.gene009540.t1 | MTR_3g116070 | 60.305 | 131 | 47 | 4 | 6 | 133 | 23 | 151 | 4.31e-45 | 164 |
MS.gene009540.t1 | MTR_7g011130 | 55.725 | 131 | 56 | 1 | 4 | 134 | 17 | 145 | 7.08e-45 | 164 |
MS.gene009540.t1 | MTR_2g068920 | 39.256 | 242 | 119 | 8 | 8 | 231 | 23 | 254 | 7.50e-44 | 159 |
MS.gene009540.t1 | MTR_2g068880 | 48.485 | 165 | 69 | 4 | 8 | 157 | 24 | 187 | 1.02e-43 | 159 |
MS.gene009540.t1 | MTR_3g070040 | 39.367 | 221 | 108 | 4 | 4 | 220 | 6 | 204 | 2.29e-42 | 156 |
MS.gene009540.t1 | MTR_4g075980 | 46.154 | 156 | 74 | 4 | 8 | 160 | 17 | 165 | 4.62e-42 | 154 |
MS.gene009540.t1 | MTR_7g011120 | 54.198 | 131 | 58 | 1 | 4 | 134 | 6 | 134 | 5.85e-42 | 154 |
MS.gene009540.t1 | MTR_8g023840 | 51.316 | 152 | 65 | 4 | 6 | 154 | 11 | 156 | 1.99e-41 | 155 |
MS.gene009540.t1 | MTR_5g090970 | 46.584 | 161 | 72 | 4 | 8 | 156 | 20 | 178 | 1.07e-40 | 151 |
MS.gene009540.t1 | MTR_5g090970 | 45.963 | 161 | 72 | 4 | 8 | 156 | 20 | 177 | 2.10e-40 | 150 |
MS.gene009540.t1 | MTR_8g099750 | 42.935 | 184 | 87 | 5 | 6 | 181 | 14 | 187 | 4.79e-39 | 144 |
MS.gene009540.t1 | MTR_3g098810 | 45.342 | 161 | 74 | 3 | 6 | 156 | 14 | 170 | 2.98e-37 | 139 |
MS.gene009540.t1 | MTR_8g023860 | 46.711 | 152 | 72 | 4 | 6 | 154 | 12 | 157 | 6.96e-37 | 143 |
MS.gene009540.t1 | MTR_3g098810 | 50.758 | 132 | 57 | 2 | 6 | 133 | 14 | 141 | 1.07e-36 | 135 |
MS.gene009540.t1 | MTR_8g023900 | 45.679 | 162 | 71 | 6 | 6 | 159 | 12 | 164 | 1.76e-36 | 143 |
MS.gene009540.t1 | MTR_8g023900 | 43.902 | 164 | 77 | 6 | 1 | 156 | 184 | 340 | 7.57e-34 | 135 |
MS.gene009540.t1 | MTR_4g052620 | 43.226 | 155 | 81 | 4 | 6 | 153 | 5 | 159 | 3.36e-36 | 137 |
MS.gene009540.t1 | MTR_2g086690 | 43.226 | 155 | 80 | 4 | 7 | 153 | 5 | 159 | 2.22e-35 | 134 |
MS.gene009540.t1 | MTR_8g023930 | 38.776 | 196 | 96 | 7 | 6 | 186 | 24 | 210 | 2.81e-34 | 137 |
MS.gene009540.t1 | MTR_7g105170 | 40.361 | 166 | 87 | 6 | 6 | 160 | 4 | 168 | 3.24e-33 | 128 |
MS.gene009540.t1 | MTR_8g094580 | 45.205 | 146 | 60 | 5 | 63 | 189 | 8 | 152 | 2.51e-32 | 125 |
MS.gene009540.t1 | MTR_8g023880 | 40.588 | 170 | 74 | 6 | 4 | 156 | 5 | 164 | 1.25e-31 | 124 |
MS.gene009540.t1 | MTR_4g094302 | 44.615 | 130 | 60 | 3 | 6 | 133 | 11 | 130 | 6.50e-30 | 115 |
MS.gene009540.t1 | MTR_4g094302 | 44.615 | 130 | 60 | 3 | 6 | 133 | 11 | 130 | 1.10e-29 | 116 |
MS.gene009540.t1 | MTR_7g070140 | 56.790 | 81 | 33 | 2 | 56 | 134 | 12 | 92 | 3.90e-24 | 99.0 |
MS.gene009540.t1 | MTR_8g093790 | 33.684 | 190 | 99 | 7 | 2 | 191 | 6 | 168 | 3.50e-19 | 86.3 |
MS.gene009540.t1 | MTR_7g083330 | 35.659 | 129 | 79 | 3 | 4 | 131 | 16 | 141 | 8.30e-19 | 85.5 |
MS.gene009540.t1 | MTR_7g083360 | 34.351 | 131 | 82 | 3 | 2 | 131 | 6 | 133 | 2.04e-17 | 80.1 |
MS.gene009540.t1 | MTR_3g096400 | 32.258 | 186 | 92 | 8 | 4 | 170 | 5 | 175 | 1.25e-16 | 79.3 |
MS.gene009540.t1 | MTR_7g083370 | 32.824 | 131 | 84 | 3 | 6 | 135 | 10 | 137 | 9.41e-16 | 75.1 |
MS.gene009540.t1 | MTR_7g070150 | 51.667 | 60 | 25 | 3 | 98 | 156 | 1 | 57 | 3.91e-13 | 65.9 |
MS.gene009540.t1 | MTR_1g087190 | 58.696 | 46 | 18 | 1 | 8 | 52 | 7 | 52 | 1.26e-12 | 63.2 |
MS.gene009540.t1 | MTR_4g078875 | 29.016 | 193 | 107 | 7 | 5 | 170 | 47 | 236 | 7.84e-11 | 63.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene009540.t1 | AT1G65910 | 45.033 | 604 | 253 | 21 | 1 | 580 | 1 | 549 | 3.70e-150 | 449 |
MS.gene009540.t1 | AT3G03200 | 39.646 | 565 | 232 | 21 | 1 | 557 | 1 | 464 | 7.58e-111 | 342 |
MS.gene009540.t1 | AT5G17260 | 40.145 | 553 | 219 | 19 | 1 | 545 | 1 | 449 | 1.60e-108 | 336 |
MS.gene009540.t1 | AT3G17730 | 75.000 | 160 | 40 | 0 | 1 | 160 | 1 | 160 | 4.07e-87 | 272 |
MS.gene009540.t1 | AT1G54330 | 74.699 | 166 | 38 | 2 | 1 | 166 | 1 | 162 | 6.33e-82 | 261 |
MS.gene009540.t1 | AT4G17980 | 63.750 | 160 | 54 | 2 | 1 | 156 | 1 | 160 | 5.19e-69 | 226 |
MS.gene009540.t1 | AT4G17980 | 63.750 | 160 | 54 | 2 | 1 | 156 | 1 | 160 | 7.48e-69 | 226 |
MS.gene009540.t1 | AT5G46590 | 60.248 | 161 | 62 | 2 | 1 | 159 | 1 | 161 | 3.88e-66 | 219 |
MS.gene009540.t1 | AT3G10500 | 60.241 | 166 | 65 | 1 | 4 | 169 | 7 | 171 | 3.44e-62 | 216 |
MS.gene009540.t1 | AT5G04410 | 59.639 | 166 | 66 | 1 | 4 | 169 | 7 | 171 | 4.07e-62 | 216 |
MS.gene009540.t1 | AT5G46590 | 60.248 | 161 | 58 | 3 | 1 | 160 | 1 | 156 | 1.41e-61 | 207 |
MS.gene009540.t1 | AT3G10480 | 59.763 | 169 | 67 | 1 | 1 | 169 | 22 | 189 | 1.51e-61 | 212 |
MS.gene009540.t1 | AT3G10480 | 60.000 | 170 | 66 | 2 | 1 | 169 | 22 | 190 | 5.68e-61 | 210 |
MS.gene009540.t1 | AT1G32510 | 49.774 | 221 | 91 | 6 | 1 | 205 | 1 | 217 | 5.69e-61 | 205 |
MS.gene009540.t1 | AT4G27410 | 56.962 | 158 | 66 | 1 | 1 | 158 | 9 | 164 | 5.93e-61 | 206 |
MS.gene009540.t1 | AT3G15500 | 58.228 | 158 | 64 | 1 | 1 | 158 | 9 | 164 | 1.51e-60 | 205 |
MS.gene009540.t1 | AT3G10490 | 59.639 | 166 | 65 | 2 | 5 | 169 | 26 | 190 | 1.00e-59 | 200 |
MS.gene009540.t1 | AT1G33060 | 59.211 | 152 | 62 | 0 | 5 | 156 | 23 | 174 | 4.77e-59 | 210 |
MS.gene009540.t1 | AT1G33060 | 59.211 | 152 | 62 | 0 | 5 | 156 | 23 | 174 | 4.95e-59 | 210 |
MS.gene009540.t1 | AT1G34180 | 57.407 | 162 | 68 | 1 | 8 | 169 | 18 | 178 | 9.90e-59 | 204 |
MS.gene009540.t1 | AT1G34190 | 57.407 | 162 | 68 | 1 | 8 | 169 | 18 | 178 | 1.14e-58 | 207 |
MS.gene009540.t1 | AT5G24590 | 55.901 | 161 | 70 | 1 | 1 | 160 | 8 | 168 | 2.52e-58 | 203 |
MS.gene009540.t1 | AT3G10490 | 59.281 | 167 | 66 | 2 | 4 | 169 | 25 | 190 | 2.80e-58 | 203 |
MS.gene009540.t1 | AT1G52890 | 50.829 | 181 | 84 | 2 | 1 | 181 | 9 | 184 | 2.99e-58 | 199 |
MS.gene009540.t1 | AT1G34180 | 57.407 | 162 | 68 | 1 | 8 | 169 | 18 | 178 | 9.20e-58 | 204 |
MS.gene009540.t1 | AT4G27410 | 52.000 | 175 | 65 | 2 | 1 | 158 | 9 | 181 | 1.11e-57 | 197 |
MS.gene009540.t1 | AT4G35580 | 59.211 | 152 | 62 | 0 | 5 | 156 | 8 | 159 | 1.15e-57 | 203 |
MS.gene009540.t1 | AT4G35580 | 59.211 | 152 | 62 | 0 | 5 | 156 | 8 | 159 | 1.57e-57 | 203 |
MS.gene009540.t1 | AT4G35580 | 59.211 | 152 | 62 | 0 | 5 | 156 | 8 | 159 | 1.62e-57 | 203 |
MS.gene009540.t1 | AT1G71930 | 44.907 | 216 | 116 | 2 | 5 | 219 | 8 | 221 | 4.18e-57 | 196 |
MS.gene009540.t1 | AT1G71930 | 44.907 | 216 | 116 | 2 | 5 | 219 | 8 | 221 | 4.18e-57 | 196 |
MS.gene009540.t1 | AT3G18400 | 55.844 | 154 | 65 | 2 | 6 | 159 | 5 | 155 | 1.29e-56 | 194 |
MS.gene009540.t1 | AT1G33280 | 54.167 | 168 | 67 | 4 | 6 | 170 | 8 | 168 | 1.39e-56 | 194 |
MS.gene009540.t1 | AT1G34180 | 53.448 | 174 | 68 | 2 | 8 | 169 | 18 | 190 | 1.02e-55 | 196 |
MS.gene009540.t1 | AT2G18060 | 52.229 | 157 | 72 | 2 | 1 | 156 | 4 | 158 | 1.07e-55 | 194 |
MS.gene009540.t1 | AT2G18060 | 52.229 | 157 | 72 | 2 | 1 | 156 | 4 | 158 | 1.07e-55 | 194 |
MS.gene009540.t1 | AT3G49530 | 54.430 | 158 | 71 | 1 | 5 | 161 | 12 | 169 | 1.31e-55 | 195 |
MS.gene009540.t1 | AT3G10480 | 50.739 | 203 | 65 | 3 | 1 | 169 | 22 | 223 | 1.65e-55 | 197 |
MS.gene009540.t1 | AT3G49530 | 54.430 | 158 | 71 | 1 | 5 | 161 | 12 | 169 | 3.38e-55 | 195 |
MS.gene009540.t1 | AT5G66300 | 52.174 | 161 | 75 | 2 | 4 | 163 | 10 | 169 | 3.93e-55 | 190 |
MS.gene009540.t1 | AT4G10350 | 53.797 | 158 | 68 | 2 | 6 | 160 | 9 | 164 | 4.36e-55 | 191 |
MS.gene009540.t1 | AT3G04070 | 44.915 | 236 | 101 | 9 | 5 | 222 | 9 | 233 | 5.10e-55 | 191 |
MS.gene009540.t1 | AT4G36160 | 52.941 | 153 | 69 | 2 | 5 | 156 | 9 | 159 | 5.80e-55 | 192 |
MS.gene009540.t1 | AT4G36160 | 52.941 | 153 | 69 | 2 | 5 | 156 | 9 | 159 | 5.80e-55 | 192 |
MS.gene009540.t1 | AT5G64060 | 51.479 | 169 | 81 | 1 | 1 | 169 | 1 | 168 | 5.92e-55 | 191 |
MS.gene009540.t1 | AT4G36160 | 52.941 | 153 | 69 | 2 | 5 | 156 | 13 | 163 | 6.11e-55 | 192 |
MS.gene009540.t1 | AT2G24430 | 58.710 | 155 | 59 | 3 | 5 | 157 | 15 | 166 | 8.06e-55 | 190 |
MS.gene009540.t1 | AT2G24430 | 58.710 | 155 | 59 | 3 | 5 | 157 | 15 | 166 | 8.06e-55 | 190 |
MS.gene009540.t1 | AT1G34180 | 53.448 | 174 | 68 | 2 | 8 | 169 | 18 | 190 | 8.39e-55 | 197 |
MS.gene009540.t1 | AT1G12260 | 50.932 | 161 | 76 | 3 | 6 | 165 | 7 | 165 | 6.47e-54 | 188 |
MS.gene009540.t1 | AT1G01720 | 56.329 | 158 | 60 | 4 | 4 | 156 | 5 | 158 | 9.55e-54 | 186 |
MS.gene009540.t1 | AT1G12260 | 50.932 | 161 | 76 | 3 | 6 | 165 | 7 | 165 | 1.56e-53 | 189 |
MS.gene009540.t1 | AT5G39610 | 56.129 | 155 | 64 | 3 | 4 | 156 | 18 | 170 | 2.33e-53 | 185 |
MS.gene009540.t1 | AT1G79580 | 54.194 | 155 | 66 | 3 | 4 | 156 | 15 | 166 | 3.48e-53 | 187 |
MS.gene009540.t1 | AT1G79580 | 54.194 | 155 | 66 | 3 | 4 | 156 | 15 | 166 | 3.48e-53 | 187 |
MS.gene009540.t1 | AT1G79580 | 54.194 | 155 | 66 | 3 | 4 | 156 | 15 | 166 | 3.48e-53 | 187 |
MS.gene009540.t1 | AT1G79580 | 54.194 | 155 | 66 | 3 | 4 | 156 | 15 | 166 | 3.48e-53 | 187 |
MS.gene009540.t1 | AT1G79580 | 54.194 | 155 | 66 | 3 | 4 | 156 | 15 | 166 | 3.48e-53 | 187 |
MS.gene009540.t1 | AT1G62700 | 52.121 | 165 | 74 | 4 | 6 | 168 | 7 | 168 | 3.63e-53 | 187 |
MS.gene009540.t1 | AT1G62700 | 52.121 | 165 | 74 | 4 | 6 | 168 | 7 | 168 | 3.63e-53 | 187 |
MS.gene009540.t1 | AT1G77450 | 54.938 | 162 | 67 | 4 | 2 | 160 | 6 | 164 | 5.35e-53 | 182 |
MS.gene009540.t1 | AT5G53950 | 56.962 | 158 | 62 | 3 | 6 | 159 | 17 | 172 | 8.55e-53 | 186 |
MS.gene009540.t1 | AT1G69490 | 56.410 | 156 | 62 | 4 | 5 | 156 | 8 | 161 | 9.68e-53 | 182 |
MS.gene009540.t1 | AT5G09330 | 53.254 | 169 | 78 | 1 | 1 | 169 | 1 | 168 | 1.09e-52 | 189 |
MS.gene009540.t1 | AT5G09330 | 53.254 | 169 | 78 | 1 | 1 | 169 | 1 | 168 | 1.09e-52 | 189 |
MS.gene009540.t1 | AT5G09330 | 53.254 | 169 | 78 | 1 | 1 | 169 | 1 | 168 | 1.09e-52 | 189 |
MS.gene009540.t1 | AT5G09330 | 53.254 | 169 | 78 | 1 | 1 | 169 | 1 | 168 | 1.09e-52 | 189 |
MS.gene009540.t1 | AT5G09330 | 53.254 | 169 | 78 | 1 | 1 | 169 | 1 | 168 | 1.09e-52 | 189 |
MS.gene009540.t1 | AT3G04070 | 49.171 | 181 | 62 | 4 | 5 | 157 | 9 | 187 | 1.26e-52 | 185 |
MS.gene009540.t1 | AT5G07680 | 54.777 | 157 | 67 | 3 | 4 | 158 | 15 | 169 | 1.30e-52 | 184 |
MS.gene009540.t1 | AT5G07680 | 54.777 | 157 | 67 | 3 | 4 | 158 | 1 | 155 | 1.35e-52 | 184 |
MS.gene009540.t1 | AT5G62380 | 52.597 | 154 | 66 | 3 | 6 | 156 | 7 | 156 | 3.14e-52 | 184 |
MS.gene009540.t1 | AT5G62380 | 52.597 | 154 | 66 | 3 | 6 | 156 | 7 | 156 | 3.14e-52 | 184 |
MS.gene009540.t1 | AT3G29035 | 43.043 | 230 | 97 | 4 | 4 | 203 | 22 | 247 | 3.21e-52 | 183 |
MS.gene009540.t1 | AT5G61430 | 54.487 | 156 | 67 | 3 | 4 | 157 | 14 | 167 | 4.28e-52 | 183 |
MS.gene009540.t1 | AT3G15170 | 54.088 | 159 | 67 | 3 | 6 | 160 | 20 | 176 | 9.29e-52 | 181 |
MS.gene009540.t1 | AT5G18270 | 54.777 | 157 | 66 | 3 | 4 | 157 | 19 | 173 | 1.04e-51 | 182 |
MS.gene009540.t1 | AT5G08790 | 46.078 | 204 | 101 | 4 | 4 | 201 | 5 | 205 | 1.59e-51 | 180 |
MS.gene009540.t1 | AT2G46770 | 44.724 | 199 | 89 | 4 | 6 | 185 | 16 | 212 | 1.60e-51 | 182 |
MS.gene009540.t1 | AT1G32770 | 50.610 | 164 | 66 | 4 | 6 | 156 | 16 | 177 | 2.12e-51 | 182 |
MS.gene009540.t1 | AT5G18270 | 54.140 | 157 | 67 | 3 | 4 | 157 | 19 | 173 | 3.67e-51 | 181 |
MS.gene009540.t1 | AT3G12977 | 51.572 | 159 | 74 | 2 | 1 | 158 | 13 | 169 | 3.93e-51 | 179 |
MS.gene009540.t1 | AT1G61110 | 51.163 | 172 | 69 | 4 | 6 | 164 | 16 | 185 | 4.07e-51 | 180 |
MS.gene009540.t1 | AT3G61910 | 47.368 | 171 | 70 | 4 | 6 | 159 | 11 | 178 | 5.55e-50 | 177 |
MS.gene009540.t1 | AT2G33480 | 52.288 | 153 | 68 | 1 | 4 | 156 | 13 | 160 | 1.10e-49 | 174 |
MS.gene009540.t1 | AT1G56010 | 53.374 | 163 | 68 | 4 | 1 | 158 | 14 | 173 | 1.67e-49 | 176 |
MS.gene009540.t1 | AT2G02450 | 52.288 | 153 | 68 | 3 | 8 | 159 | 53 | 201 | 2.10e-49 | 177 |
MS.gene009540.t1 | AT2G02450 | 52.288 | 153 | 68 | 3 | 8 | 159 | 53 | 201 | 2.58e-49 | 177 |
MS.gene009540.t1 | AT2G33480 | 52.288 | 153 | 66 | 2 | 4 | 156 | 13 | 158 | 3.32e-49 | 173 |
MS.gene009540.t1 | AT5G63790 | 51.220 | 164 | 72 | 4 | 2 | 160 | 46 | 206 | 3.77e-49 | 174 |
MS.gene009540.t1 | AT5G63790 | 52.500 | 160 | 68 | 4 | 2 | 156 | 56 | 212 | 4.91e-49 | 174 |
MS.gene009540.t1 | AT1G76420 | 54.839 | 155 | 65 | 3 | 5 | 157 | 21 | 172 | 5.36e-49 | 174 |
MS.gene009540.t1 | AT5G22290 | 50.980 | 153 | 68 | 2 | 1 | 153 | 16 | 161 | 9.01e-49 | 174 |
MS.gene009540.t1 | AT1G32870 | 57.229 | 166 | 66 | 3 | 6 | 169 | 10 | 172 | 2.77e-48 | 177 |
MS.gene009540.t1 | AT3G15510 | 52.761 | 163 | 62 | 4 | 10 | 159 | 21 | 181 | 2.80e-48 | 173 |
MS.gene009540.t1 | AT1G32870 | 57.229 | 166 | 66 | 3 | 6 | 169 | 10 | 172 | 3.34e-48 | 177 |
MS.gene009540.t1 | AT1G32870 | 57.229 | 166 | 66 | 3 | 6 | 169 | 46 | 208 | 5.18e-48 | 177 |
MS.gene009540.t1 | AT3G04060 | 52.532 | 158 | 70 | 3 | 4 | 158 | 18 | 173 | 7.20e-48 | 172 |
MS.gene009540.t1 | AT3G44290 | 54.110 | 146 | 59 | 3 | 8 | 153 | 16 | 153 | 8.87e-48 | 168 |
MS.gene009540.t1 | AT5G13180 | 52.903 | 155 | 65 | 3 | 4 | 156 | 12 | 160 | 1.34e-47 | 168 |
MS.gene009540.t1 | AT2G27300 | 51.592 | 157 | 68 | 2 | 1 | 157 | 9 | 157 | 1.69e-47 | 171 |
MS.gene009540.t1 | AT3G44290 | 54.110 | 146 | 59 | 3 | 8 | 153 | 16 | 153 | 4.56e-47 | 169 |
MS.gene009540.t1 | AT2G17040 | 47.399 | 173 | 79 | 5 | 8 | 177 | 8 | 171 | 5.42e-47 | 167 |
MS.gene009540.t1 | AT2G43000 | 51.974 | 152 | 70 | 2 | 8 | 158 | 20 | 169 | 1.11e-46 | 166 |
MS.gene009540.t1 | AT1G26870 | 46.108 | 167 | 77 | 3 | 6 | 161 | 16 | 180 | 1.64e-46 | 170 |
MS.gene009540.t1 | AT5G39820 | 45.198 | 177 | 70 | 4 | 8 | 160 | 22 | 195 | 5.41e-46 | 166 |
MS.gene009540.t1 | AT4G28530 | 52.353 | 170 | 55 | 7 | 6 | 156 | 10 | 172 | 8.29e-45 | 164 |
MS.gene009540.t1 | AT1G52880 | 53.125 | 160 | 61 | 5 | 10 | 157 | 21 | 178 | 7.41e-43 | 157 |
MS.gene009540.t1 | AT5G04395 | 46.000 | 150 | 67 | 2 | 2 | 137 | 24 | 173 | 1.54e-40 | 146 |
MS.gene009540.t1 | AT3G12910 | 45.238 | 168 | 70 | 6 | 8 | 157 | 23 | 186 | 6.85e-37 | 140 |
MS.gene009540.t1 | AT4G10350 | 52.041 | 98 | 47 | 0 | 63 | 160 | 20 | 117 | 1.06e-32 | 128 |
MS.gene009540.t1 | AT5G61430 | 58.763 | 97 | 38 | 2 | 63 | 157 | 8 | 104 | 4.61e-32 | 125 |
MS.gene009540.t1 | AT3G12977 | 55.670 | 97 | 42 | 1 | 63 | 158 | 20 | 116 | 6.15e-32 | 124 |
MS.gene009540.t1 | AT4G01520 | 42.105 | 152 | 78 | 5 | 7 | 153 | 5 | 151 | 3.66e-31 | 124 |
MS.gene009540.t1 | AT3G44350 | 40.260 | 154 | 87 | 4 | 9 | 157 | 8 | 161 | 1.50e-30 | 120 |
MS.gene009540.t1 | AT5G22380 | 41.447 | 152 | 82 | 5 | 9 | 153 | 8 | 159 | 3.42e-30 | 119 |
MS.gene009540.t1 | AT4G01550 | 40.698 | 172 | 84 | 5 | 9 | 176 | 7 | 164 | 1.31e-29 | 122 |
MS.gene009540.t1 | AT1G56010 | 54.545 | 99 | 42 | 1 | 63 | 158 | 8 | 106 | 1.42e-29 | 118 |
MS.gene009540.t1 | AT4G01540 | 40.909 | 154 | 81 | 5 | 9 | 157 | 7 | 155 | 3.33e-29 | 120 |
MS.gene009540.t1 | AT4G01540 | 41.333 | 150 | 78 | 5 | 9 | 153 | 7 | 151 | 3.55e-29 | 120 |
MS.gene009540.t1 | AT4G01540 | 40.260 | 154 | 82 | 4 | 9 | 157 | 7 | 155 | 3.94e-29 | 120 |
MS.gene009540.t1 | AT4G01540 | 41.333 | 150 | 78 | 5 | 9 | 153 | 7 | 151 | 5.88e-29 | 121 |
MS.gene009540.t1 | AT2G33480 | 53.191 | 94 | 44 | 0 | 63 | 156 | 10 | 103 | 1.43e-28 | 114 |
MS.gene009540.t1 | AT5G64530 | 42.537 | 134 | 61 | 4 | 4 | 135 | 1 | 120 | 3.38e-28 | 111 |
MS.gene009540.t1 | AT5G64530 | 43.182 | 132 | 59 | 4 | 4 | 133 | 1 | 118 | 8.68e-28 | 110 |
MS.gene009540.t1 | AT4G28530 | 54.545 | 110 | 30 | 3 | 6 | 98 | 10 | 116 | 9.61e-28 | 114 |
MS.gene009540.t1 | AT3G44350 | 39.310 | 145 | 83 | 4 | 9 | 148 | 8 | 152 | 2.78e-27 | 108 |
MS.gene009540.t1 | AT3G04420 | 36.774 | 155 | 91 | 2 | 7 | 159 | 4 | 153 | 4.18e-27 | 112 |
MS.gene009540.t1 | AT1G02230 | 40.132 | 152 | 79 | 5 | 7 | 153 | 4 | 148 | 1.08e-26 | 112 |
MS.gene009540.t1 | AT3G04420 | 36.774 | 155 | 91 | 2 | 7 | 159 | 4 | 153 | 1.46e-26 | 111 |
MS.gene009540.t1 | AT3G10490 | 58.889 | 90 | 35 | 2 | 81 | 169 | 2 | 90 | 1.13e-24 | 106 |
MS.gene009540.t1 | AT3G10490 | 58.889 | 90 | 35 | 2 | 81 | 169 | 2 | 90 | 1.13e-24 | 106 |
MS.gene009540.t1 | AT1G02250 | 38.961 | 154 | 78 | 6 | 7 | 153 | 4 | 148 | 3.42e-24 | 105 |
MS.gene009540.t1 | AT1G01010 | 31.696 | 224 | 121 | 7 | 9 | 207 | 6 | 222 | 8.46e-24 | 105 |
MS.gene009540.t1 | AT1G02220 | 34.437 | 151 | 87 | 4 | 7 | 154 | 4 | 145 | 8.47e-22 | 98.6 |
MS.gene009540.t1 | AT2G43000 | 48.889 | 90 | 45 | 1 | 70 | 158 | 2 | 91 | 1.02e-20 | 90.9 |
MS.gene009540.t1 | AT3G56530 | 32.237 | 152 | 98 | 3 | 4 | 153 | 50 | 198 | 1.39e-18 | 87.8 |
MS.gene009540.t1 | AT2G18060 | 45.070 | 71 | 37 | 1 | 86 | 156 | 2 | 70 | 3.78e-18 | 85.5 |
MS.gene009540.t1 | AT3G55210 | 32.919 | 161 | 90 | 5 | 6 | 153 | 11 | 166 | 8.99e-18 | 84.7 |
MS.gene009540.t1 | AT5G22290 | 53.731 | 67 | 25 | 1 | 87 | 153 | 2 | 62 | 3.47e-17 | 82.0 |
MS.gene009540.t1 | AT5G14000 | 31.818 | 132 | 84 | 2 | 4 | 133 | 13 | 140 | 4.06e-17 | 79.3 |
MS.gene009540.t1 | AT5G14000 | 31.818 | 132 | 84 | 2 | 4 | 133 | 13 | 140 | 3.23e-16 | 78.2 |
MS.gene009540.t1 | AT5G50820 | 33.582 | 134 | 75 | 4 | 4 | 133 | 15 | 138 | 6.63e-16 | 77.0 |
MS.gene009540.t1 | AT3G04430 | 35.606 | 132 | 71 | 5 | 12 | 131 | 6 | 135 | 1.99e-15 | 75.9 |
MS.gene009540.t1 | AT5G56620 | 31.548 | 168 | 79 | 7 | 4 | 139 | 41 | 204 | 1.86e-11 | 67.0 |
MS.gene009540.t1 | AT5G56620 | 31.548 | 168 | 79 | 7 | 4 | 139 | 41 | 204 | 1.88e-11 | 67.0 |
MS.gene009540.t1 | AT5G56620 | 31.548 | 168 | 79 | 7 | 4 | 139 | 41 | 204 | 2.53e-11 | 66.6 |
MS.gene009540.t1 | AT4G29230 | 31.250 | 160 | 83 | 6 | 4 | 139 | 46 | 202 | 5.36e-11 | 65.9 |
MS.gene009540.t1 | AT4G29230 | 31.481 | 162 | 80 | 7 | 4 | 139 | 46 | 202 | 7.35e-11 | 65.5 |
MS.gene009540.t1 | AT4G29230 | 31.481 | 162 | 80 | 7 | 4 | 139 | 45 | 201 | 7.40e-11 | 65.5 |
Find 160 sgRNAs with CRISPR-Local
Find 360 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ACTTCTTCGTTTACTAATTA+TGG | 0.121270 | 5.3:-62468949 | MS.gene009540:CDS |
TTTCATTGCCTCCAGGTTTC+AGG | 0.142642 | 5.3:-62471628 | MS.gene009540:CDS |
TTTGATGCATCGTGTTTATT+TGG | 0.178984 | 5.3:-62466151 | MS.gene009540:CDS |
CCCATGGCTCTCGTACAAAT+TGG | 0.222002 | 5.3:-62469869 | MS.gene009540:CDS |
CCATATTGTCCTCCAACTTT+TGG | 0.268556 | 5.3:+62469204 | None:intergenic |
TTGTTGCTTATTATCTAAAT+AGG | 0.273542 | 5.3:-62471583 | MS.gene009540:CDS |
ACGAATCGTGCAACCAAATC+TGG | 0.280386 | 5.3:-62469987 | MS.gene009540:CDS |
TATCTAAATAGGAAGATTAA+TGG | 0.282813 | 5.3:-62471572 | MS.gene009540:CDS |
ATCAAAGAAAATAGCAAGTT+TGG | 0.283752 | 5.3:-62466196 | MS.gene009540:CDS |
TTGATTGGTCACTTGTTATC+TGG | 0.283981 | 5.3:+62469160 | None:intergenic |
CATTGTGTTCCCTTGATGTT+TGG | 0.291674 | 5.3:+62467235 | None:intergenic |
TCTATAGAGTGTTTATTGTT+TGG | 0.309883 | 5.3:+62466315 | None:intergenic |
TTCACTTAATCATGCTTCTC+AGG | 0.318478 | 5.3:-62468069 | MS.gene009540:CDS |
CCAAAAGTTGGAGGACAATA+TGG | 0.318542 | 5.3:-62469204 | MS.gene009540:CDS |
TGAGATCATTGAGGAAATAA+AGG | 0.320384 | 5.3:-62466439 | MS.gene009540:CDS |
ATCCAAGGCTTGTAAATAAC+TGG | 0.328844 | 5.3:+62468031 | None:intergenic |
TGTTTATTGTTTGGCATCAT+TGG | 0.334489 | 5.3:+62466324 | None:intergenic |
TGATCTCCAATTCAATCTTA+TGG | 0.341534 | 5.3:+62471549 | None:intergenic |
ATTATTACCTGGGAATGATA+TGG | 0.349131 | 5.3:-62470060 | MS.gene009540:CDS |
TCTTCTACAAAATTCTCATT+GGG | 0.352827 | 5.3:+62466498 | None:intergenic |
CGACAAGGGATCATGGAAAT+TGG | 0.354633 | 5.3:-62469014 | MS.gene009540:CDS |
ATCTTCTACAAAATTCTCAT+TGG | 0.355837 | 5.3:+62466497 | None:intergenic |
TGCCTTCCAATACCCAGATT+TGG | 0.362335 | 5.3:+62469974 | None:intergenic |
TGAAACCACTCCTAGCTTGC+AGG | 0.368248 | 5.3:-62469811 | MS.gene009540:intron |
GGACAATATGGTAATGTTAC+AGG | 0.371392 | 5.3:-62469192 | MS.gene009540:CDS |
GGCTTGCTCACCTCACAATA+TGG | 0.378311 | 5.3:-62469067 | MS.gene009540:CDS |
GTCCAGTTATTTACAAGCCT+TGG | 0.389203 | 5.3:-62468033 | MS.gene009540:CDS |
ATTGTGTTCCCTTGATGTTT+GGG | 0.390866 | 5.3:+62467236 | None:intergenic |
TCAAAAGAGGTTTGGTTTGT+TGG | 0.393311 | 5.3:-62466039 | MS.gene009540:CDS |
GTAGTTGGAAGACTAAATAA+TGG | 0.394217 | 5.3:+62468970 | None:intergenic |
TAATGGCCATAAGATTGAAT+TGG | 0.404348 | 5.3:-62471555 | MS.gene009540:CDS |
ATAGCTCAACGTTTGTTGAT+TGG | 0.409354 | 5.3:+62469145 | None:intergenic |
AATTACAAATGATATCTTGC+AGG | 0.410942 | 5.3:-62468099 | MS.gene009540:CDS |
GGAATGAGTCAAAAGAGGTT+TGG | 0.411979 | 5.3:-62466047 | MS.gene009540:CDS |
ATCTTTCTTCATGAAGTTCA+AGG | 0.415168 | 5.3:-62466253 | MS.gene009540:CDS |
TCTGGGTATTGGAAGGCAAC+CGG | 0.415206 | 5.3:-62469969 | MS.gene009540:CDS |
CCAGGGAAATCATTATTACC+TGG | 0.422516 | 5.3:-62470071 | MS.gene009540:intron |
GTAGAGAATTTGAGATGGAT+TGG | 0.422814 | 5.3:-62467831 | MS.gene009540:CDS |
TGGGATATGTTGACAAAACT+TGG | 0.424746 | 5.3:-62467923 | MS.gene009540:CDS |
ATTTCTTTAGCCCTCGTGAT+AGG | 0.430194 | 5.3:-62470031 | MS.gene009540:CDS |
AAATTATTTGATGCAAATGA+AGG | 0.433232 | 5.3:-62469088 | MS.gene009540:CDS |
TTAGTAAACGAAGAAGTAGT+TGG | 0.434841 | 5.3:+62468955 | None:intergenic |
AAACCTGGAGGCAATGAAAC+AGG | 0.435510 | 5.3:+62471632 | None:intergenic |
CACTTGTTATCTGGTTTGCA+TGG | 0.440837 | 5.3:+62469169 | None:intergenic |
CCATGGCTCTCGTACAAATT+GGG | 0.441564 | 5.3:-62469868 | MS.gene009540:CDS |
AGATGCAAAGATGATGATAA+TGG | 0.441835 | 5.3:-62466286 | MS.gene009540:CDS |
CTCTTCCTCGATAGTAAACT+AGG | 0.442628 | 5.3:+62469895 | None:intergenic |
GTGCAACCAAATCTGGGTAT+TGG | 0.448103 | 5.3:-62469980 | MS.gene009540:CDS |
AGTGTGGTCTTGAAGGAAAT+AGG | 0.448391 | 5.3:-62465994 | MS.gene009540:CDS |
CTTGGATGGAGGGTATGTTA+TGG | 0.457226 | 5.3:+62468924 | None:intergenic |
AAAGGTTAGTCATAGAATGT+TGG | 0.457270 | 5.3:-62466421 | MS.gene009540:CDS |
GTTTACTATGCCTCCATTGG+AGG | 0.458982 | 5.3:-62468174 | MS.gene009540:CDS |
TACTATGCCTCCATTGGAGG+TGG | 0.460939 | 5.3:-62468171 | MS.gene009540:CDS |
AGGCCTGTGTGATGGGGAAA+TGG | 0.465161 | 5.3:-62466233 | MS.gene009540:CDS |
GATTCGTTCTAGATCCATTC+GGG | 0.466518 | 5.3:+62470003 | None:intergenic |
GCACCTGTTTCATTGCCTCC+AGG | 0.468560 | 5.3:-62471635 | MS.gene009540:CDS |
CAAATTCTCTACCATCCGTT+TGG | 0.471237 | 5.3:+62467842 | None:intergenic |
GTTGGTGTAAAATGTGAGAA+AGG | 0.471420 | 5.3:-62466021 | MS.gene009540:CDS |
AGAAGGAGAACCTGCAAGCT+AGG | 0.472184 | 5.3:+62469801 | None:intergenic |
AAAGTAAAATCATCTTCATA+AGG | 0.480913 | 5.3:+62467990 | None:intergenic |
AGGATTAAGTGTGGTCTTGA+AGG | 0.480916 | 5.3:-62466001 | MS.gene009540:CDS |
TAGGTTTACTATGCCTCCAT+TGG | 0.482015 | 5.3:-62468177 | MS.gene009540:CDS |
GTGGAGGAATTTCCTCAAGT+TGG | 0.490438 | 5.3:-62468152 | MS.gene009540:CDS |
CGATTCGTTCTAGATCCATT+CGG | 0.490510 | 5.3:+62470002 | None:intergenic |
AACACAAGATCTATAGAGAT+AGG | 0.493319 | 5.3:-62467891 | MS.gene009540:CDS |
TAGTTGGAAGACTAAATAAT+GGG | 0.497545 | 5.3:+62468971 | None:intergenic |
CCCAATTTGTACGAGAGCCA+TGG | 0.500594 | 5.3:+62469868 | None:intergenic |
TCACTTAATCATGCTTCTCA+GGG | 0.500637 | 5.3:-62468068 | MS.gene009540:CDS |
TCCTCAATGATCTCAAAGCT+TGG | 0.501853 | 5.3:+62466447 | None:intergenic |
GATGCATCGTGTTTATTTGG+AGG | 0.502081 | 5.3:-62466148 | MS.gene009540:CDS |
AAGTTCAAGGCCTGTGTGAT+GGG | 0.502468 | 5.3:-62466240 | MS.gene009540:CDS |
AATGGTACGACAAGGGATCA+TGG | 0.502815 | 5.3:-62469021 | MS.gene009540:CDS |
ATGATATCAGTGAATTCTCA+TGG | 0.503256 | 5.3:-62466542 | MS.gene009540:CDS |
TTGAGCTATACTCTGAAAGA+AGG | 0.503430 | 5.3:-62469131 | MS.gene009540:CDS |
ATGAATATCGTCTTGATGAG+AGG | 0.503672 | 5.3:-62469839 | MS.gene009540:CDS |
ACAGTGATTGTGCCAAAAGT+TGG | 0.507511 | 5.3:-62469216 | MS.gene009540:CDS |
AGCATGAAATATCCTCGATT+GGG | 0.509184 | 5.3:+62467259 | None:intergenic |
CCAATTTGTACGAGAGCCAT+GGG | 0.509568 | 5.3:+62469869 | None:intergenic |
CATGAATGATATGAGCTCCA+TGG | 0.513072 | 5.3:-62467943 | MS.gene009540:CDS |
AATCACATGAGAGAGTCAAA+TGG | 0.514617 | 5.3:-62466068 | MS.gene009540:CDS |
GAGCATGAAATATCCTCGAT+TGG | 0.517265 | 5.3:+62467258 | None:intergenic |
TGTGAACCGTGGGACTTGCC+AGG | 0.519080 | 5.3:-62471503 | MS.gene009540:intron |
GAGACTTCTCTCAATATCAA+TGG | 0.521212 | 5.3:-62469039 | MS.gene009540:CDS |
AATTCTCAAGCTCGAGCAGT+AGG | 0.521751 | 5.3:-62469930 | MS.gene009540:CDS |
TTTCATGCTCCCAAACATCA+AGG | 0.523944 | 5.3:-62467245 | MS.gene009540:CDS |
GGAAATTCCTCCACCTCCAA+TGG | 0.528982 | 5.3:+62468161 | None:intergenic |
ATCAAGAGTCAAAGGCCAAA+CGG | 0.530614 | 5.3:-62467857 | MS.gene009540:CDS |
AGGTTTCAGGTTCCACCCTA+CGG | 0.532914 | 5.3:-62471615 | MS.gene009540:CDS |
CAGGGAAATCATTATTACCT+GGG | 0.538350 | 5.3:-62470070 | MS.gene009540:CDS |
AAGATGATGATAATGGAGAA+TGG | 0.544768 | 5.3:-62466279 | MS.gene009540:CDS |
ATGAATGATATGAGCTCCAT+GGG | 0.545336 | 5.3:-62467942 | MS.gene009540:CDS |
TATGCCTCCATTGGAGGTGG+AGG | 0.545899 | 5.3:-62468168 | MS.gene009540:CDS |
TGAGCTATACTCTGAAAGAA+GGG | 0.546148 | 5.3:-62469130 | MS.gene009540:CDS |
CGAATCGTGCAACCAAATCT+GGG | 0.546533 | 5.3:-62469986 | MS.gene009540:CDS |
AACTTGGTGAAATAATGTAA+TGG | 0.547913 | 5.3:+62466380 | None:intergenic |
TCATGGGGATTCATCAATGA+TGG | 0.548361 | 5.3:-62466525 | MS.gene009540:CDS |
CTGGGTATTGGAAGGCAACC+GGG | 0.551323 | 5.3:-62469968 | MS.gene009540:CDS |
TGATATCAGTGAATTCTCAT+GGG | 0.554636 | 5.3:-62466541 | MS.gene009540:CDS |
TCCAAGCTTTGAGATCATTG+AGG | 0.563456 | 5.3:-62466448 | MS.gene009540:CDS |
CTGTACTCTTCTTGATCACA+CGG | 0.568059 | 5.3:+62469235 | None:intergenic |
CAAATGGAATGAGTCAAAAG+AGG | 0.568226 | 5.3:-62466052 | MS.gene009540:CDS |
TACCACTCCATATCATTCCC+AGG | 0.569597 | 5.3:+62470053 | None:intergenic |
GCAACAAGTTCTTCATCCGT+AGG | 0.570402 | 5.3:+62471599 | None:intergenic |
ATTCTCAAGCTCGAGCAGTA+GGG | 0.570616 | 5.3:-62469929 | MS.gene009540:CDS |
CAACAAGTTCTTCATCCGTA+GGG | 0.572552 | 5.3:+62471600 | None:intergenic |
AGTGTGCAAGGATGCAACAT+AGG | 0.574842 | 5.3:-62468196 | MS.gene009540:CDS |
AGCTTGGAGAATTTGAGTAA+TGG | 0.575389 | 5.3:+62466463 | None:intergenic |
TGAATTTGAAGTGTTTGTGA+AGG | 0.576360 | 5.3:+62466354 | None:intergenic |
ATTACAAATGATATCTTGCA+GGG | 0.577185 | 5.3:-62468098 | MS.gene009540:CDS |
GTAGGGTGGAACCTGAAACC+TGG | 0.578503 | 5.3:+62471617 | None:intergenic |
TTCTCAAGCTCGAGCAGTAG+GGG | 0.579595 | 5.3:-62469928 | MS.gene009540:CDS |
TGAATATCGTCTTGATGAGA+GGG | 0.582090 | 5.3:-62469838 | MS.gene009540:CDS |
GAAGTTCAAGGCCTGTGTGA+TGG | 0.583686 | 5.3:-62466241 | MS.gene009540:CDS |
GTGATTGTGCCAAAAGTTGG+AGG | 0.584888 | 5.3:-62469213 | MS.gene009540:CDS |
CTTCCTTGTTGTGTCACATG+AGG | 0.585636 | 5.3:+62468125 | None:intergenic |
AGGGAACACAATGGCATGCA+AGG | 0.586165 | 5.3:-62467225 | MS.gene009540:intron |
TATAGAGATAGGTGATCTAG+AGG | 0.589067 | 5.3:-62467880 | MS.gene009540:CDS |
GGATGGTAGAGAATTTGAGA+TGG | 0.591998 | 5.3:-62467836 | MS.gene009540:CDS |
TCTCTATAAGTGTGAACCGT+GGG | 0.592650 | 5.3:-62471513 | MS.gene009540:CDS |
TTCGGGTACTTCCTATCACG+AGG | 0.598759 | 5.3:+62470020 | None:intergenic |
AACCAAATCTGGGTATTGGA+AGG | 0.600307 | 5.3:-62469976 | MS.gene009540:CDS |
AAATTACCTGGCAAGTCCCA+CGG | 0.604416 | 5.3:+62471497 | None:intergenic |
TCTAGAGGATCAAGAGTCAA+AGG | 0.606182 | 5.3:-62467865 | MS.gene009540:CDS |
AGAGTCAAAGGCCAAACGGA+TGG | 0.606950 | 5.3:-62467853 | MS.gene009540:CDS |
TCTTCCTCGATAGTAAACTA+GGG | 0.609563 | 5.3:+62469896 | None:intergenic |
TTCATGCTCCCAAACATCAA+GGG | 0.609845 | 5.3:-62467244 | MS.gene009540:CDS |
GGGATATGTTGACAAAACTT+GGG | 0.610464 | 5.3:-62467922 | MS.gene009540:CDS |
GTCTCATTTACCATATTGTG+AGG | 0.612804 | 5.3:+62469057 | None:intergenic |
CATAACATACCCTCCATCCA+AGG | 0.617588 | 5.3:-62468923 | MS.gene009540:intron |
GTATTGGAAGGCAACCGGGA+AGG | 0.620851 | 5.3:-62469964 | MS.gene009540:CDS |
ACATGAGGTATTCCAACTTG+AGG | 0.622240 | 5.3:+62468140 | None:intergenic |
CTTCTACAAAATTCTCATTG+GGG | 0.623221 | 5.3:+62466499 | None:intergenic |
ACAAAATGTTGTCCCAATCG+AGG | 0.627117 | 5.3:-62467271 | MS.gene009540:CDS |
CGTGATAGGAAGTACCCGAA+TGG | 0.632326 | 5.3:-62470017 | MS.gene009540:CDS |
AATTCCTCCACCTCCAATGG+AGG | 0.633153 | 5.3:+62468164 | None:intergenic |
AAAACCCTAGTTTACTATCG+AGG | 0.634321 | 5.3:-62469900 | MS.gene009540:CDS |
GTTCCATTTCCCCATCACAC+AGG | 0.634750 | 5.3:+62466230 | None:intergenic |
ATGTGAGAAAGGATTAAGTG+TGG | 0.635962 | 5.3:-62466010 | MS.gene009540:CDS |
TGTACCACATGGGCTAGCCA+TGG | 0.637402 | 5.3:-62465943 | MS.gene009540:CDS |
CAAGTTCTTCATCCGTAGGG+TGG | 0.638361 | 5.3:+62471603 | None:intergenic |
TCAATATCAATGGTACGACA+AGG | 0.648156 | 5.3:-62469029 | MS.gene009540:CDS |
ATACCTCATGTGACACAACA+AGG | 0.650067 | 5.3:-62468128 | MS.gene009540:CDS |
AGAAGATCAAGGGTTAGCCA+TGG | 0.651875 | 5.3:+62465926 | None:intergenic |
GAGCTATACTCTGAAAGAAG+GGG | 0.652301 | 5.3:-62469129 | MS.gene009540:CDS |
TACCTGGGAATGATATGGAG+TGG | 0.652400 | 5.3:-62470055 | MS.gene009540:CDS |
GAGAACCTGCAAGCTAGGAG+TGG | 0.654041 | 5.3:+62469806 | None:intergenic |
CAATATCAATGGTACGACAA+GGG | 0.658341 | 5.3:-62469028 | MS.gene009540:CDS |
TTTGGCGCTTTGTACCACAT+GGG | 0.659507 | 5.3:-62465953 | MS.gene009540:CDS |
ATCTCTATAAGTGTGAACCG+TGG | 0.665137 | 5.3:-62471514 | MS.gene009540:CDS |
ATATTGCACTAGAGTGTGCA+AGG | 0.673783 | 5.3:-62468208 | MS.gene009540:CDS |
ATGATGATAATGGAGAATGG+AGG | 0.674089 | 5.3:-62466276 | MS.gene009540:CDS |
GATATCAGTGAATTCTCATG+GGG | 0.677165 | 5.3:-62466540 | MS.gene009540:CDS |
TATCGAGGAAGAGCACCCCA+TGG | 0.678830 | 5.3:-62469885 | MS.gene009540:CDS |
TTAGCCATGGCTAGCCCATG+TGG | 0.679756 | 5.3:+62465939 | None:intergenic |
GTGTTTGTGAAGGAACAACT+TGG | 0.687378 | 5.3:+62466364 | None:intergenic |
AGTTCAAGGCCTGTGTGATG+GGG | 0.712292 | 5.3:-62466239 | MS.gene009540:CDS |
CAAACATCAAGGGAACACAA+TGG | 0.715678 | 5.3:-62467234 | MS.gene009540:CDS |
TCGGGTACTTCCTATCACGA+GGG | 0.722170 | 5.3:+62470021 | None:intergenic |
GGGTGGAACCTGAAACCTGG+AGG | 0.736395 | 5.3:+62471620 | None:intergenic |
CAATTTGTACGAGAGCCATG+GGG | 0.773296 | 5.3:+62469870 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAATATAAAAATTAAATTTA+AGG | + | chr5.3:62466300-62466319 | None:intergenic | 0.0% |
!! | AAAATAATTAATGCAAAATA+TGG | - | chr5.3:62467276-62467295 | MS.gene009540:CDS | 10.0% |
!! | AAATAATTAATGCAAAATAT+GGG | - | chr5.3:62467277-62467296 | MS.gene009540:CDS | 10.0% |
!! | ATAAAAATTAAATTTAAGGA+TGG | + | chr5.3:62466296-62466315 | None:intergenic | 10.0% |
!! | TAAAAATTAAATTTAAGGAT+GGG | + | chr5.3:62466295-62466314 | None:intergenic | 10.0% |
!! | TATTATTACAAAAACTTAAT+AGG | + | chr5.3:62467417-62467436 | None:intergenic | 10.0% |
!!! | AAATGATTTTTTTAACAAAA+TGG | + | chr5.3:62469935-62469954 | None:intergenic | 10.0% |
!!! | ATATTTTGCATTAATTATTT+TGG | + | chr5.3:62467277-62467296 | None:intergenic | 10.0% |
!!! | ATTTATCTGATTTTTTATTT+CGG | + | chr5.3:62466193-62466212 | None:intergenic | 10.0% |
!!! | CAATTTGTATTTTATAAAAA+AGG | - | chr5.3:62470523-62470542 | MS.gene009540:intron | 10.0% |
!!! | TTAAGATCAATATTTTTATA+TGG | - | chr5.3:62470251-62470270 | MS.gene009540:intron | 10.0% |
!!! | TTGTTAAAAAAATCATTTTT+AGG | - | chr5.3:62469937-62469956 | MS.gene009540:CDS | 10.0% |
!!! | TTTAAAAAAAATAGATTTTG+AGG | + | chr5.3:62470140-62470159 | None:intergenic | 10.0% |
!!! | TTTAGAAAAAAAATAGATTT+TGG | + | chr5.3:62469995-62470014 | None:intergenic | 10.0% |
!! | AAGCGAAAAAATTATTAAAA+TGG | + | chr5.3:62467827-62467846 | None:intergenic | 15.0% |
!! | AATAATTAATGCAAAATATG+GGG | - | chr5.3:62467278-62467297 | MS.gene009540:CDS | 15.0% |
!! | ACAAAAATAAAACTTCAAAT+TGG | + | chr5.3:62467474-62467493 | None:intergenic | 15.0% |
!! | ATTTAGTGTTATATTGTATT+GGG | + | chr5.3:62470768-62470787 | None:intergenic | 15.0% |
!! | ATTTGAGTAAAAAATAATGT+TGG | + | chr5.3:62466663-62466682 | None:intergenic | 15.0% |
!! | TAACGATCTAATTTATTAAT+TGG | + | chr5.3:62466833-62466852 | None:intergenic | 15.0% |
!! | TATTGGTATAATATTATGTA+TGG | + | chr5.3:62467958-62467977 | None:intergenic | 15.0% |
!! | TATTTAGTGTTATATTGTAT+TGG | + | chr5.3:62470769-62470788 | None:intergenic | 15.0% |
!! | TTAAAAACACAAAAATGTAT+GGG | + | chr5.3:62470392-62470411 | None:intergenic | 15.0% |
!!! | AACTAAATAAATTTGGTAAT+TGG | + | chr5.3:62466323-62466342 | None:intergenic | 15.0% |
!!! | AAGAAAAGTGTATAAATAAA+GGG | + | chr5.3:62470833-62470852 | None:intergenic | 15.0% |
!!! | AGAAAAGATTTAAAATTCAA+AGG | + | chr5.3:62470935-62470954 | None:intergenic | 15.0% |
!!! | ATCTTCAAAAAATGATTTTT+AGG | - | chr5.3:62470044-62470063 | MS.gene009540:CDS | 15.0% |
!!! | ATTTTAAATCTTTTCTTTTC+CGG | - | chr5.3:62470939-62470958 | MS.gene009540:intron | 15.0% |
!!! | CTATTTTTTTTCTAAATACA+AGG | - | chr5.3:62469999-62470018 | MS.gene009540:CDS | 15.0% |
!!! | CTTTCTAATCATTTTTATAA+AGG | - | chr5.3:62470431-62470450 | MS.gene009540:intron | 15.0% |
!!! | TAAGAAAAGTGTATAAATAA+AGG | + | chr5.3:62470834-62470853 | None:intergenic | 15.0% |
!!! | TAATTAGAGTAATTTCATTT+TGG | - | chr5.3:62467996-62468015 | MS.gene009540:CDS | 15.0% |
!!! | TATTTTTATTTTTTTTTCGG+TGG | - | chr5.3:62469803-62469822 | MS.gene009540:intron | 15.0% |
!!! | TTGATGTATTTGATTTATAA+TGG | + | chr5.3:62470492-62470511 | None:intergenic | 15.0% |
!!! | TTTAAAAAAAGTGTAACATT+AGG | + | chr5.3:62468201-62468220 | None:intergenic | 15.0% |
!!! | TTTGTTTTTAACAATTTGTT+TGG | + | chr5.3:62468866-62468885 | None:intergenic | 15.0% |
!! | AAAAAAACAATCATCCAATT+GGG | - | chr5.3:62469300-62469319 | MS.gene009540:intron | 20.0% |
!! | AAAAGTGGAATATATTGTAT+TGG | + | chr5.3:62470810-62470829 | None:intergenic | 20.0% |
!! | AAAGTAAAATCATCTTCATA+AGG | + | chr5.3:62469590-62469609 | None:intergenic | 20.0% |
!! | AAAGTGGAATATATTGTATT+GGG | + | chr5.3:62470809-62470828 | None:intergenic | 20.0% |
!! | AAATTATTTGATGCAAATGA+AGG | - | chr5.3:62468489-62468508 | MS.gene009540:intron | 20.0% |
!! | AATTCAAGTATTATATGCAA+AGG | + | chr5.3:62469335-62469354 | None:intergenic | 20.0% |
!! | ACTTTATATCCTAACTAATT+TGG | - | chr5.3:62467226-62467245 | MS.gene009540:CDS | 20.0% |
!! | GCTCTATAACTAAATAAATT+TGG | + | chr5.3:62466365-62466384 | None:intergenic | 20.0% |
!! | GTTAAAAACACAAAAATGTA+TGG | + | chr5.3:62470393-62470412 | None:intergenic | 20.0% |
!! | TAGTATTACTTTATTGATCA+TGG | - | chr5.3:62470899-62470918 | MS.gene009540:intron | 20.0% |
!! | TATCTAAATAGGAAGATTAA+TGG | - | chr5.3:62466005-62466024 | MS.gene009540:CDS | 20.0% |
!! | TCAAAAAAATCCAAAACAAA+CGG | + | chr5.3:62469838-62469857 | None:intergenic | 20.0% |
!! | TGTGATTGATATAGTAAAAA+AGG | - | chr5.3:62467064-62467083 | MS.gene009540:intron | 20.0% |
!! | TTAGAATAACAACAGATATT+GGG | + | chr5.3:62470178-62470197 | None:intergenic | 20.0% |
!! | TTGTCAAAAAAAAAAGTTGA+AGG | + | chr5.3:62467867-62467886 | None:intergenic | 20.0% |
!!! | AATACTTGAATTTATTTTGC+AGG | - | chr5.3:62469343-62469362 | MS.gene009540:intron | 20.0% |
!!! | AATTTTCCAATTTGTATAGA+TGG | - | chr5.3:62470279-62470298 | MS.gene009540:intron | 20.0% |
!!! | ATAGACACTTTTTTTTTTTG+AGG | - | chr5.3:62466988-62467007 | MS.gene009540:intron | 20.0% |
!!! | CAAATATATGCTTACTTTTT+TGG | - | chr5.3:62466959-62466978 | MS.gene009540:intron | 20.0% |
!!! | CTACAATCAATTTTGATTAT+AGG | - | chr5.3:62466707-62466726 | MS.gene009540:intron | 20.0% |
!!! | GACACTTTTTTTTAGAAAAT+GGG | + | chr5.3:62470699-62470718 | None:intergenic | 20.0% |
!!! | GATTAGATTTCTATTTTGTT+TGG | + | chr5.3:62468048-62468067 | None:intergenic | 20.0% |
!!! | TAGACACTTTTTTTTTTTGA+GGG | - | chr5.3:62466989-62467008 | MS.gene009540:intron | 20.0% |
!!! | TTGTTGCTTATTATCTAAAT+AGG | - | chr5.3:62465994-62466013 | MS.gene009540:CDS | 20.0% |
! | AAAAAGTTGAAGGATTCTAA+AGG | + | chr5.3:62467857-62467876 | None:intergenic | 25.0% |
! | AAAAGTGAGAAAAAGAAAGA+AGG | + | chr5.3:62467796-62467815 | None:intergenic | 25.0% |
! | AAGGACAAGAGAAAAAAAAA+AGG | - | chr5.3:62470542-62470561 | MS.gene009540:intron | 25.0% |
! | AATTACAAATGATATCTTGC+AGG | - | chr5.3:62469478-62469497 | MS.gene009540:intron | 25.0% |
! | ACACATCAAAATGTAGAAAT+TGG | + | chr5.3:62468270-62468289 | None:intergenic | 25.0% |
! | ACTTCTTCGTTTACTAATTA+TGG | - | chr5.3:62468628-62468647 | MS.gene009540:intron | 25.0% |
! | ATAATCTTGATTACCACAAT+AGG | + | chr5.3:62467132-62467151 | None:intergenic | 25.0% |
! | ATCAAAGAAAATAGCAAGTT+TGG | - | chr5.3:62471381-62471400 | MS.gene009540:intron | 25.0% |
! | ATCTTCTACAAAATTCTCAT+TGG | + | chr5.3:62471083-62471102 | None:intergenic | 25.0% |
! | ATTACAAATGATATCTTGCA+GGG | - | chr5.3:62469479-62469498 | MS.gene009540:intron | 25.0% |
! | CCATAATATGAATTATAGCA+AGG | + | chr5.3:62466510-62466529 | None:intergenic | 25.0% |
! | GAAAAAAACAATCATCCAAT+TGG | - | chr5.3:62469299-62469318 | MS.gene009540:intron | 25.0% |
! | GCTATAATTCATATTATGGA+AGG | - | chr5.3:62466511-62466530 | MS.gene009540:CDS | 25.0% |
! | GTTAGAATAACAACAGATAT+TGG | + | chr5.3:62470179-62470198 | None:intergenic | 25.0% |
! | TAGTTGGAAGACTAAATAAT+GGG | + | chr5.3:62468609-62468628 | None:intergenic | 25.0% |
! | TCAAATTAAATTTGTGTGCA+TGG | + | chr5.3:62468694-62468713 | None:intergenic | 25.0% |
! | TCTTCTACAAAATTCTCATT+GGG | + | chr5.3:62471082-62471101 | None:intergenic | 25.0% |
! | TGTAGTCTAAGTATAAAACT+CGG | + | chr5.3:62467914-62467933 | None:intergenic | 25.0% |
! | TGTATAAATAAAGGGAAAAG+TGG | + | chr5.3:62470825-62470844 | None:intergenic | 25.0% |
! | TTATATCCTAACTAATTTGG+CGG | - | chr5.3:62467229-62467248 | MS.gene009540:CDS | 25.0% |
! | TTTGTCTTCTTATAATTCCA+GGG | - | chr5.3:62467489-62467508 | MS.gene009540:intron | 25.0% |
!! | AAATTAGACTTTTTGAACCT+TGG | - | chr5.3:62469251-62469270 | MS.gene009540:CDS | 25.0% |
!! | AACTTGGTGAAATAATGTAA+TGG | + | chr5.3:62471200-62471219 | None:intergenic | 25.0% |
!! | AATGAGAATTTTGTAGAAGA+TGG | - | chr5.3:62471082-62471101 | MS.gene009540:intron | 25.0% |
!! | ATAATTTTCATTGTCATCCA+AGG | + | chr5.3:62469564-62469583 | None:intergenic | 25.0% |
!! | CATACAGTACAAGAAATTTT+TGG | + | chr5.3:62466737-62466756 | None:intergenic | 25.0% |
!! | CATTTTCTTCACCATATTTT+TGG | - | chr5.3:62471606-62471625 | MS.gene009540:CDS | 25.0% |
!! | CCTTGCTATAATTCATATTA+TGG | - | chr5.3:62466507-62466526 | MS.gene009540:CDS | 25.0% |
!! | CTTTTCTCTTTCATCTTTTT+TGG | + | chr5.3:62471481-62471500 | None:intergenic | 25.0% |
!! | GTAAAAACCATCATTTTGTT+AGG | + | chr5.3:62470967-62470986 | None:intergenic | 25.0% |
!! | TACTTTTACCAACTTACATA+GGG | - | chr5.3:62469024-62469043 | MS.gene009540:CDS | 25.0% |
!! | TCTATAGAGTGTTTATTGTT+TGG | + | chr5.3:62471265-62471284 | None:intergenic | 25.0% |
!! | TGAAGATGATTTTACTTTCA+TGG | - | chr5.3:62469592-62469611 | MS.gene009540:intron | 25.0% |
!! | TTGAAATGAGTCAGTTATTT+TGG | + | chr5.3:62470722-62470741 | None:intergenic | 25.0% |
!! | TTTTGTAGAAGATGGTAAAA+TGG | - | chr5.3:62471090-62471109 | MS.gene009540:intron | 25.0% |
!! | TTTTGTCTTCTTATAATTCC+AGG | - | chr5.3:62467488-62467507 | MS.gene009540:intron | 25.0% |
!!! | AAACTTGCTATTTTCTTTGA+TGG | + | chr5.3:62471382-62471401 | None:intergenic | 25.0% |
!!! | AACTTGCTATTTTCTTTGAT+GGG | + | chr5.3:62471381-62471400 | None:intergenic | 25.0% |
!!! | AATGAGTAATATATCGACTT+TGG | - | chr5.3:62470609-62470628 | MS.gene009540:intron | 25.0% |
!!! | AGACACTTTTTTTTTTTGAG+GGG | - | chr5.3:62466990-62467009 | MS.gene009540:intron | 25.0% |
!!! | ATATTTTAGTGTCTAAGCTT+GGG | + | chr5.3:62469279-62469298 | None:intergenic | 25.0% |
!!! | CATTTTAGCTAGAAGAATAT+TGG | + | chr5.3:62467975-62467994 | None:intergenic | 25.0% |
!!! | GATTACTGTTTTTGACAATA+TGG | - | chr5.3:62467317-62467336 | MS.gene009540:intron | 25.0% |
!!! | GGACACTTTTTTTTAGAAAA+TGG | + | chr5.3:62470700-62470719 | None:intergenic | 25.0% |
!!! | TATCATTGTCATTTTGTTCA+AGG | + | chr5.3:62471021-62471040 | None:intergenic | 25.0% |
!!! | TCTTTCATCTTTTTTGGTTT+TGG | + | chr5.3:62471475-62471494 | None:intergenic | 25.0% |
!!! | TGAAATGAGTCAGTTATTTT+GGG | + | chr5.3:62470721-62470740 | None:intergenic | 25.0% |
!!! | TTACTTTTACCAACTTACAT+AGG | - | chr5.3:62469023-62469042 | MS.gene009540:CDS | 25.0% |
AACACAAGATCTATAGAGAT+AGG | - | chr5.3:62469686-62469705 | MS.gene009540:intron | 30.0% | |
AGATAAGATAGTGAGATCAA+AGG | - | chr5.3:62469190-62469209 | MS.gene009540:CDS | 30.0% | |
AGATGCAAAGATGATGATAA+TGG | - | chr5.3:62471291-62471310 | MS.gene009540:intron | 30.0% | |
ATCTTTCTTCATGAAGTTCA+AGG | - | chr5.3:62471324-62471343 | MS.gene009540:intron | 30.0% | |
ATGATATCAGTGAATTCTCA+TGG | - | chr5.3:62471035-62471054 | MS.gene009540:intron | 30.0% | |
ATTATTACCTGGGAATGATA+TGG | - | chr5.3:62467517-62467536 | MS.gene009540:intron | 30.0% | |
CAAAGTAGGTCAATTTAATC+GGG | - | chr5.3:62470869-62470888 | MS.gene009540:intron | 30.0% | |
CCAAAGTAGGTCAATTTAAT+CGG | - | chr5.3:62470868-62470887 | MS.gene009540:intron | 30.0% | |
CTTCTACAAAATTCTCATTG+GGG | + | chr5.3:62471081-62471100 | None:intergenic | 30.0% | |
GATAAGATAGTGAGATCAAA+GGG | - | chr5.3:62469191-62469210 | MS.gene009540:CDS | 30.0% | |
GCTATAGTTCATATCATAGA+AGG | - | chr5.3:62466551-62466570 | MS.gene009540:CDS | 30.0% | |
GTAGTTGGAAGACTAAATAA+TGG | + | chr5.3:62468610-62468629 | None:intergenic | 30.0% | |
GTTCTTCCATCTATACAAAT+TGG | + | chr5.3:62470288-62470307 | None:intergenic | 30.0% | |
TAATGGCCATAAGATTGAAT+TGG | - | chr5.3:62466022-62466041 | MS.gene009540:CDS | 30.0% | |
TATATCCTAACTAATTTGGC+GGG | - | chr5.3:62467230-62467249 | MS.gene009540:CDS | 30.0% | |
TCAACTTTGTAGAAAAGAAG+AGG | - | chr5.3:62470576-62470595 | MS.gene009540:intron | 30.0% | |
TGAAAAATAATCACAACCTC+AGG | - | chr5.3:62468303-62468322 | MS.gene009540:intron | 30.0% | |
TGAGATCATTGAGGAAATAA+AGG | - | chr5.3:62471138-62471157 | MS.gene009540:intron | 30.0% | |
TGATATCAGTGAATTCTCAT+GGG | - | chr5.3:62471036-62471055 | MS.gene009540:intron | 30.0% | |
TGATCTCACTATCTTATCTT+AGG | + | chr5.3:62469189-62469208 | None:intergenic | 30.0% | |
TGATCTCCAATTCAATCTTA+TGG | + | chr5.3:62466031-62466050 | None:intergenic | 30.0% | |
TGTATAGCTTCTTGAAATTG+CGG | - | chr5.3:62468796-62468815 | MS.gene009540:intron | 30.0% | |
TGTTTATTGTTTGGCATCAT+TGG | + | chr5.3:62471256-62471275 | None:intergenic | 30.0% | |
TTAGTAAACGAAGAAGTAGT+TGG | + | chr5.3:62468625-62468644 | None:intergenic | 30.0% | |
TTTGATGCATCGTGTTTATT+TGG | - | chr5.3:62471426-62471445 | MS.gene009540:intron | 30.0% | |
! | AAAAAGTGTAACATTAGGCT+AGG | + | chr5.3:62468196-62468215 | None:intergenic | 30.0% |
! | AAAAGTGTAACATTAGGCTA+GGG | + | chr5.3:62468195-62468214 | None:intergenic | 30.0% |
! | AAAGGTTAGTCATAGAATGT+TGG | - | chr5.3:62471156-62471175 | MS.gene009540:intron | 30.0% |
! | AAGTGTGAAATTGTGTGTTT+TGG | + | chr5.3:62468908-62468927 | None:intergenic | 30.0% |
! | ACCTTTTCAAAATCTTCTCT+TGG | + | chr5.3:62469776-62469795 | None:intergenic | 30.0% |
! | ATAAAGTGTCAATGTTTGCA+TGG | + | chr5.3:62467213-62467232 | None:intergenic | 30.0% |
! | ATGATTTTGTAGACCTTAAC+AGG | - | chr5.3:62466863-62466882 | MS.gene009540:intron | 30.0% |
! | ATTTAAAATTCAAAGGACCG+AGG | + | chr5.3:62470928-62470947 | None:intergenic | 30.0% |
! | CGTGTTCAGTTTACAAATTT+TGG | - | chr5.3:62466143-62466162 | MS.gene009540:CDS | 30.0% |
! | TAAAGTGTCAATGTTTGCAT+GGG | + | chr5.3:62467212-62467231 | None:intergenic | 30.0% |
! | TGAATTTGAAGTGTTTGTGA+AGG | + | chr5.3:62471226-62471245 | None:intergenic | 30.0% |
! | TGATTTTGTAGACCTTAACA+GGG | - | chr5.3:62466864-62466883 | MS.gene009540:intron | 30.0% |
!! | AAGATGATGATAATGGAGAA+TGG | - | chr5.3:62471298-62471317 | MS.gene009540:intron | 30.0% |
!! | AATGGATTGTTGAGACAAAT+TGG | + | chr5.3:62470639-62470658 | None:intergenic | 30.0% |
!! | TAGATTTTGGAAAAGCTACT+TGG | + | chr5.3:62469982-62470001 | None:intergenic | 30.0% |
!!! | ACTTGAATTTATTTTGCAGG+TGG | - | chr5.3:62469346-62469365 | MS.gene009540:intron | 30.0% |
!!! | ATTTTTTTTTCGGTGGCTAA+TGG | - | chr5.3:62469810-62469829 | MS.gene009540:intron | 30.0% |
!!! | CATATTTTAGTGTCTAAGCT+TGG | + | chr5.3:62469280-62469299 | None:intergenic | 30.0% |
!!! | GACACTTTTTTTTTTTGAGG+GGG | - | chr5.3:62466991-62467010 | MS.gene009540:intron | 30.0% |
!!! | TAGTTTACGCTTTTTGACTT+AGG | + | chr5.3:62467174-62467193 | None:intergenic | 30.0% |
!!! | TATTTTAGTGTCTAAGCTTG+GGG | + | chr5.3:62469278-62469297 | None:intergenic | 30.0% |
!!! | TTTTCTTTGATGGGTTGAAT+AGG | + | chr5.3:62471372-62471391 | None:intergenic | 30.0% |
!!! | TTTTTTTTTCGGTGGCTAAT+GGG | - | chr5.3:62469811-62469830 | MS.gene009540:intron | 30.0% |
AAAACCCTAGTTTACTATCG+AGG | - | chr5.3:62467677-62467696 | MS.gene009540:intron | 35.0% | |
AAAGGTTCAAAAAGCCCAAT+TGG | + | chr5.3:62469317-62469336 | None:intergenic | 35.0% | |
AATAGGATTCCTAAAGGTGA+AGG | + | chr5.3:62467115-62467134 | None:intergenic | 35.0% | |
AATCACATGAGAGAGTCAAA+TGG | - | chr5.3:62471509-62471528 | MS.gene009540:CDS | 35.0% | |
AGCATGAAATATCCTCGATT+GGG | + | chr5.3:62470321-62470340 | None:intergenic | 35.0% | |
AGCTTGGAGAATTTGAGTAA+TGG | + | chr5.3:62471117-62471136 | None:intergenic | 35.0% | |
ATAGGATTCCTAAAGGTGAA+GGG | + | chr5.3:62467114-62467133 | None:intergenic | 35.0% | |
ATCCAAGGCTTGTAAATAAC+TGG | + | chr5.3:62469549-62469568 | None:intergenic | 35.0% | |
ATGAATATCGTCTTGATGAG+AGG | - | chr5.3:62467738-62467757 | MS.gene009540:intron | 35.0% | |
ATGAATGATATGAGCTCCAT+GGG | - | chr5.3:62469635-62469654 | MS.gene009540:intron | 35.0% | |
ATGTGAGAAAGGATTAAGTG+TGG | - | chr5.3:62471567-62471586 | MS.gene009540:CDS | 35.0% | |
ATTGTGTTCCCTTGATGTTT+GGG | + | chr5.3:62470344-62470363 | None:intergenic | 35.0% | |
CAAATGGAATGAGTCAAAAG+AGG | - | chr5.3:62471525-62471544 | MS.gene009540:CDS | 35.0% | |
CAATATCAATGGTACGACAA+GGG | - | chr5.3:62468549-62468568 | MS.gene009540:intron | 35.0% | |
CAGGGAAATCATTATTACCT+GGG | - | chr5.3:62467507-62467526 | MS.gene009540:intron | 35.0% | |
CCGATTAAATTGACCTACTT+TGG | + | chr5.3:62470871-62470890 | None:intergenic | 35.0% | |
GAGACTTCTCTCAATATCAA+TGG | - | chr5.3:62468538-62468557 | MS.gene009540:intron | 35.0% | |
GATATCAGTGAATTCTCATG+GGG | - | chr5.3:62471037-62471056 | MS.gene009540:intron | 35.0% | |
GATTAGTGTGTGAAATTACC+TGG | + | chr5.3:62466095-62466114 | None:intergenic | 35.0% | |
GGGAGTAGTACTCTATTAAA+TGG | + | chr5.3:62470657-62470676 | None:intergenic | 35.0% | |
GGGATATGTTGACAAAACTT+GGG | - | chr5.3:62469655-62469674 | MS.gene009540:intron | 35.0% | |
GTATGTTTCCCTATGTAAGT+TGG | + | chr5.3:62469035-62469054 | None:intergenic | 35.0% | |
GTCTAAGTATAAAACTCGGT+TGG | + | chr5.3:62467910-62467929 | None:intergenic | 35.0% | |
GTCTCATTTACCATATTGTG+AGG | + | chr5.3:62468523-62468542 | None:intergenic | 35.0% | |
GTTGGTGTAAAATGTGAGAA+AGG | - | chr5.3:62471556-62471575 | MS.gene009540:CDS | 35.0% | |
TACCACAATAGGATTCCTAA+AGG | + | chr5.3:62467121-62467140 | None:intergenic | 35.0% | |
TATAGAGATAGGTGATCTAG+AGG | - | chr5.3:62469697-62469716 | MS.gene009540:intron | 35.0% | |
TCAATATCAATGGTACGACA+AGG | - | chr5.3:62468548-62468567 | MS.gene009540:intron | 35.0% | |
TCACTTAATCATGCTTCTCA+GGG | - | chr5.3:62469509-62469528 | MS.gene009540:intron | 35.0% | |
TCTGTGTGAAAAACCAAAGT+AGG | - | chr5.3:62470855-62470874 | MS.gene009540:intron | 35.0% | |
TCTTCCTCGATAGTAAACTA+GGG | + | chr5.3:62467684-62467703 | None:intergenic | 35.0% | |
TGAATATCGTCTTGATGAGA+GGG | - | chr5.3:62467739-62467758 | MS.gene009540:intron | 35.0% | |
TGGGATATGTTGACAAAACT+TGG | - | chr5.3:62469654-62469673 | MS.gene009540:intron | 35.0% | |
TTCACTTAATCATGCTTCTC+AGG | - | chr5.3:62469508-62469527 | MS.gene009540:intron | 35.0% | |
TTTATTGATCATGGTGACCT+CGG | - | chr5.3:62470908-62470927 | MS.gene009540:intron | 35.0% | |
! | ACCATCATTTTGTTAGGTAC+CGG | + | chr5.3:62470961-62470980 | None:intergenic | 35.0% |
! | ATAGCTCAACGTTTGTTGAT+TGG | + | chr5.3:62468435-62468454 | None:intergenic | 35.0% |
! | ATGACCAAAGCTAAGGTTTT+AGG | + | chr5.3:62469134-62469153 | None:intergenic | 35.0% |
! | GATTGTACTTCTAGAGAAGA+TGG | - | chr5.3:62467086-62467105 | MS.gene009540:intron | 35.0% |
! | GGACAATATGGTAATGTTAC+AGG | - | chr5.3:62468385-62468404 | MS.gene009540:intron | 35.0% |
! | GTAGAGAATTTGAGATGGAT+TGG | - | chr5.3:62469746-62469765 | MS.gene009540:intron | 35.0% |
! | TAATGTCTAGAGTTGAACCT+AGG | - | chr5.3:62468978-62468997 | MS.gene009540:CDS | 35.0% |
! | TGAGCTATACTCTGAAAGAA+GGG | - | chr5.3:62468447-62468466 | MS.gene009540:intron | 35.0% |
! | TTGAGCTATACTCTGAAAGA+AGG | - | chr5.3:62468446-62468465 | MS.gene009540:intron | 35.0% |
!! | AAACCTTAGCTTTGGTCATT+TGG | - | chr5.3:62469135-62469154 | MS.gene009540:CDS | 35.0% |
!! | AGTTTTGTCAACATATCCCA+TGG | + | chr5.3:62469654-62469673 | None:intergenic | 35.0% |
!! | ATGATGATAATGGAGAATGG+AGG | - | chr5.3:62471301-62471320 | MS.gene009540:intron | 35.0% |
!! | GCCAAGAGAAGATTTTGAAA+AGG | - | chr5.3:62469772-62469791 | MS.gene009540:intron | 35.0% |
!! | GTATTTTTGTGTACCTTGGA+TGG | + | chr5.3:62468670-62468689 | None:intergenic | 35.0% |
!! | TCAAAAGAGGTTTGGTTTGT+TGG | - | chr5.3:62471538-62471557 | MS.gene009540:CDS | 35.0% |
!! | TGGAGTATTTTTGTGTACCT+TGG | + | chr5.3:62468674-62468693 | None:intergenic | 35.0% |
!! | TTGATTGGTCACTTGTTATC+TGG | + | chr5.3:62468420-62468439 | None:intergenic | 35.0% |
!!! | CTTTTTTTTTTTGAGGGGGA+CGG | - | chr5.3:62466995-62467014 | MS.gene009540:intron | 35.0% |
AAGAAGCTCGTGACTTTCAT+TGG | + | chr5.3:62466892-62466911 | None:intergenic | 40.0% | |
ACAAAATGTTGTCCCAATCG+AGG | - | chr5.3:62470306-62470325 | MS.gene009540:intron | 40.0% | |
ACAGTGATTGTGCCAAAAGT+TGG | - | chr5.3:62468361-62468380 | MS.gene009540:intron | 40.0% | |
AGAAGCTCGTGACTTTCATT+GGG | + | chr5.3:62466891-62466910 | None:intergenic | 40.0% | |
AGTTGAACCTAGGACAAGTT+GGG | - | chr5.3:62468988-62469007 | MS.gene009540:CDS | 40.0% | |
ATACAAGGAGCTCAAGTGTA+AGG | - | chr5.3:62470014-62470033 | MS.gene009540:CDS | 40.0% | |
ATACCTCATGTGACACAACA+AGG | - | chr5.3:62469449-62469468 | MS.gene009540:intron | 40.0% | |
ATATTGCACTAGAGTGTGCA+AGG | - | chr5.3:62469369-62469388 | MS.gene009540:intron | 40.0% | |
ATCAAGAGTCAAAGGCCAAA+CGG | - | chr5.3:62469720-62469739 | MS.gene009540:intron | 40.0% | |
ATCTCTATAAGTGTGAACCG+TGG | - | chr5.3:62466063-62466082 | MS.gene009540:CDS | 40.0% | |
ATTTCTTTAGCCCTCGTGAT+AGG | - | chr5.3:62467546-62467565 | MS.gene009540:intron | 40.0% | |
CAAACATCAAGGGAACACAA+TGG | - | chr5.3:62470343-62470362 | MS.gene009540:intron | 40.0% | |
CAAATTCTCTACCATCCGTT+TGG | + | chr5.3:62469738-62469757 | None:intergenic | 40.0% | |
CAACAAGTTCTTCATCCGTA+GGG | + | chr5.3:62465980-62465999 | None:intergenic | 40.0% | |
CATGAATGATATGAGCTCCA+TGG | - | chr5.3:62469634-62469653 | MS.gene009540:intron | 40.0% | |
CATTGTGTTCCCTTGATGTT+TGG | + | chr5.3:62470345-62470364 | None:intergenic | 40.0% | |
CCAAAAGTTGGAGGACAATA+TGG | - | chr5.3:62468373-62468392 | MS.gene009540:intron | 40.0% | |
CCAGGGAAATCATTATTACC+TGG | - | chr5.3:62467506-62467525 | MS.gene009540:intron | 40.0% | |
CCAGGTAATAATGATTTCCC+TGG | + | chr5.3:62467509-62467528 | None:intergenic | 40.0% | |
CTCTTCCTCGATAGTAAACT+AGG | + | chr5.3:62467685-62467704 | None:intergenic | 40.0% | |
CTGTACTCTTCTTGATCACA+CGG | + | chr5.3:62468345-62468364 | None:intergenic | 40.0% | |
GAAAATGGGTCAGTTATTCC+AGG | + | chr5.3:62470685-62470704 | None:intergenic | 40.0% | |
GAGCATGAAATATCCTCGAT+TGG | + | chr5.3:62470322-62470341 | None:intergenic | 40.0% | |
GATGCATCGTGTTTATTTGG+AGG | - | chr5.3:62471429-62471448 | MS.gene009540:intron | 40.0% | |
GGAATGAGTCAAAAGAGGTT+TGG | - | chr5.3:62471530-62471549 | MS.gene009540:CDS | 40.0% | |
GGATGGTAGAGAATTTGAGA+TGG | - | chr5.3:62469741-62469760 | MS.gene009540:intron | 40.0% | |
GTAGGTCAATTTAATCGGGA+CGG | - | chr5.3:62470873-62470892 | MS.gene009540:intron | 40.0% | |
GTCCAGTTATTTACAAGCCT+TGG | - | chr5.3:62469544-62469563 | MS.gene009540:intron | 40.0% | |
GTGTTTGTGAAGGAACAACT+TGG | + | chr5.3:62471216-62471235 | None:intergenic | 40.0% | |
GTTTACCCGCCAAATTAGTT+AGG | + | chr5.3:62467238-62467257 | None:intergenic | 40.0% | |
GTTTGTTCTCACGTTTGGTT+GGG | - | chr5.3:62468748-62468767 | MS.gene009540:intron | 40.0% | |
TACAAGGAGCTCAAGTGTAA+GGG | - | chr5.3:62470015-62470034 | MS.gene009540:CDS | 40.0% | |
TACGTGTTTGTTCTCACGTT+TGG | - | chr5.3:62468743-62468762 | MS.gene009540:intron | 40.0% | |
TAGGATTCCTAAAGGTGAAG+GGG | + | chr5.3:62467113-62467132 | None:intergenic | 40.0% | |
TAGGTTTACTATGCCTCCAT+TGG | - | chr5.3:62469400-62469419 | MS.gene009540:intron | 40.0% | |
TCATGGGGATTCATCAATGA+TGG | - | chr5.3:62471052-62471071 | MS.gene009540:intron | 40.0% | |
TCCGGTACCTAACAAAATGA+TGG | - | chr5.3:62470957-62470976 | MS.gene009540:intron | 40.0% | |
TCCTCAATGATCTCAAAGCT+TGG | + | chr5.3:62471133-62471152 | None:intergenic | 40.0% | |
TCTAGAGGATCAAGAGTCAA+AGG | - | chr5.3:62469712-62469731 | MS.gene009540:intron | 40.0% | |
TCTCTATAAGTGTGAACCGT+GGG | - | chr5.3:62466064-62466083 | MS.gene009540:CDS | 40.0% | |
TGTTTGTTCTCACGTTTGGT+TGG | - | chr5.3:62468747-62468766 | MS.gene009540:intron | 40.0% | |
TTCATGCTCCCAAACATCAA+GGG | - | chr5.3:62470333-62470352 | MS.gene009540:intron | 40.0% | |
TTTCATGCTCCCAAACATCA+AGG | - | chr5.3:62470332-62470351 | MS.gene009540:intron | 40.0% | |
! | ACATGAGGTATTCCAACTTG+AGG | + | chr5.3:62469440-62469459 | None:intergenic | 40.0% |
! | ACTAATTTGGCGGGTAAACA+TGG | - | chr5.3:62467239-62467258 | MS.gene009540:CDS | 40.0% |
! | AGGATTAAGTGTGGTCTTGA+AGG | - | chr5.3:62471576-62471595 | MS.gene009540:CDS | 40.0% |
! | AGTGTGGTCTTGAAGGAAAT+AGG | - | chr5.3:62471583-62471602 | MS.gene009540:CDS | 40.0% |
! | CACCTTTAGGAATCCTATTG+TGG | - | chr5.3:62467116-62467135 | MS.gene009540:intron | 40.0% |
! | CCATATTGTCCTCCAACTTT+TGG | + | chr5.3:62468376-62468395 | None:intergenic | 40.0% |
! | CGATTCGTTCTAGATCCATT+CGG | + | chr5.3:62467578-62467597 | None:intergenic | 40.0% |
! | CTAATTTGGCGGGTAAACAT+GGG | - | chr5.3:62467240-62467259 | MS.gene009540:CDS | 40.0% |
! | GAGCTATACTCTGAAAGAAG+GGG | - | chr5.3:62468448-62468467 | MS.gene009540:intron | 40.0% |
! | GATTCGTTCTAGATCCATTC+GGG | + | chr5.3:62467577-62467596 | None:intergenic | 40.0% |
! | GGTACAAAGCGCCAAAAATA+TGG | + | chr5.3:62471620-62471639 | None:intergenic | 40.0% |
! | TTTTGTGTACCTTGGATGGA+GGG | + | chr5.3:62468666-62468685 | None:intergenic | 40.0% |
! | TTTTTGTGTACCTTGGATGG+AGG | + | chr5.3:62468667-62468686 | None:intergenic | 40.0% |
!! | AACCAAATCTGGGTATTGGA+AGG | - | chr5.3:62467601-62467620 | MS.gene009540:intron | 40.0% |
!! | ATTCACTTTTCGATCCTTCC+CGG | + | chr5.3:62467630-62467649 | None:intergenic | 40.0% |
!! | CACTTGTTATCTGGTTTGCA+TGG | + | chr5.3:62468411-62468430 | None:intergenic | 40.0% |
!! | TCCAAGCTTTGAGATCATTG+AGG | - | chr5.3:62471129-62471148 | MS.gene009540:intron | 40.0% |
AAACCTGGAGGCAATGAAAC+AGG | + | chr5.3:62465948-62465967 | None:intergenic | 45.0% | |
AAATTACCTGGCAAGTCCCA+CGG | + | chr5.3:62466083-62466102 | None:intergenic | 45.0% | |
AAGTTCAAGGCCTGTGTGAT+GGG | - | chr5.3:62471337-62471356 | MS.gene009540:intron | 45.0% | |
AATGGTACGACAAGGGATCA+TGG | - | chr5.3:62468556-62468575 | MS.gene009540:intron | 45.0% | |
AATTCTCAAGCTCGAGCAGT+AGG | - | chr5.3:62467647-62467666 | MS.gene009540:intron | 45.0% | |
AATTGCGGTGAAAACTGCCT+TGG | - | chr5.3:62468811-62468830 | MS.gene009540:intron | 45.0% | |
ACATTCAAGCTTCTTGCGTG+CGG | + | chr5.3:62468779-62468798 | None:intergenic | 45.0% | |
ACGAATCGTGCAACCAAATC+TGG | - | chr5.3:62467590-62467609 | MS.gene009540:intron | 45.0% | |
AGTGTGCAAGGATGCAACAT+AGG | - | chr5.3:62469381-62469400 | MS.gene009540:intron | 45.0% | |
ATGGGTCAGTTATTCCAGGA+CGG | + | chr5.3:62470681-62470700 | None:intergenic | 45.0% | |
ATTCTCAAGCTCGAGCAGTA+GGG | - | chr5.3:62467648-62467667 | MS.gene009540:intron | 45.0% | |
ATTGCGGTGAAAACTGCCTT+GGG | - | chr5.3:62468812-62468831 | MS.gene009540:intron | 45.0% | |
CAATTTGTACGAGAGCCATG+GGG | + | chr5.3:62467710-62467729 | None:intergenic | 45.0% | |
CATAACATACCCTCCATCCA+AGG | - | chr5.3:62468654-62468673 | MS.gene009540:intron | 45.0% | |
CCAATTTGTACGAGAGCCAT+GGG | + | chr5.3:62467711-62467730 | None:intergenic | 45.0% | |
CCATGGCTCTCGTACAAATT+GGG | - | chr5.3:62467709-62467728 | MS.gene009540:intron | 45.0% | |
CGAATCGTGCAACCAAATCT+GGG | - | chr5.3:62467591-62467610 | MS.gene009540:intron | 45.0% | |
CGACAAGGGATCATGGAAAT+TGG | - | chr5.3:62468563-62468582 | MS.gene009540:intron | 45.0% | |
CTTTCATTGGGTCCCTGTTA+AGG | + | chr5.3:62466879-62466898 | None:intergenic | 45.0% | |
GAGGCCTAAAACCTTAGCTT+TGG | - | chr5.3:62469127-62469146 | MS.gene009540:CDS | 45.0% | |
GAGTTGAACCTAGGACAAGT+TGG | - | chr5.3:62468987-62469006 | MS.gene009540:CDS | 45.0% | |
GCAACAAGTTCTTCATCCGT+AGG | + | chr5.3:62465981-62466000 | None:intergenic | 45.0% | |
GGACCAAATGACCAAAGCTA+AGG | + | chr5.3:62469141-62469160 | None:intergenic | 45.0% | |
GGGACGCGATAATTGCATAT+GGG | - | chr5.3:62468832-62468851 | MS.gene009540:intron | 45.0% | |
GTGATTGTGCCAAAAGTTGG+AGG | - | chr5.3:62468364-62468383 | MS.gene009540:intron | 45.0% | |
GTGCAACCAAATCTGGGTAT+TGG | - | chr5.3:62467597-62467616 | MS.gene009540:intron | 45.0% | |
GTGGAGGAATTTCCTCAAGT+TGG | - | chr5.3:62469425-62469444 | MS.gene009540:intron | 45.0% | |
GTTGAACCTAGGACAAGTTG+GGG | - | chr5.3:62468989-62469008 | MS.gene009540:CDS | 45.0% | |
GTTTACTATGCCTCCATTGG+AGG | - | chr5.3:62469403-62469422 | MS.gene009540:intron | 45.0% | |
TACCACTCCATATCATTCCC+AGG | + | chr5.3:62467527-62467546 | None:intergenic | 45.0% | |
TACCTGGGAATGATATGGAG+TGG | - | chr5.3:62467522-62467541 | MS.gene009540:intron | 45.0% | |
TATGCAATTATCGCGTCCCA+AGG | + | chr5.3:62468831-62468850 | None:intergenic | 45.0% | |
TCTTAGGCGAGACTTATGCA+CGG | + | chr5.3:62469173-62469192 | None:intergenic | 45.0% | |
TGCCTTCCAATACCCAGATT+TGG | + | chr5.3:62467606-62467625 | None:intergenic | 45.0% | |
TGGGACGCGATAATTGCATA+TGG | - | chr5.3:62468831-62468850 | MS.gene009540:intron | 45.0% | |
TGTCAATGTTTGCATGGGAG+TGG | + | chr5.3:62467207-62467226 | None:intergenic | 45.0% | |
TTTCATTGCCTCCAGGTTTC+AGG | - | chr5.3:62465949-62465968 | MS.gene009540:CDS | 45.0% | |
TTTGGCGCTTTGTACCACAT+GGG | - | chr5.3:62471624-62471643 | MS.gene009540:CDS | 45.0% | |
! | AAACTCGGTTGGTCAGTTGA+AGG | + | chr5.3:62467899-62467918 | None:intergenic | 45.0% |
! | CAAAGAGCATATGCATCCTG+AGG | + | chr5.3:62468322-62468341 | None:intergenic | 45.0% |
! | CTTCCTTGTTGTGTCACATG+AGG | + | chr5.3:62469455-62469474 | None:intergenic | 45.0% |
! | CTTGGATGGAGGGTATGTTA+TGG | + | chr5.3:62468656-62468675 | None:intergenic | 45.0% |
! | TTTTGGCGCTTTGTACCACA+TGG | - | chr5.3:62471623-62471642 | MS.gene009540:CDS | 45.0% |
!! | GCTAATGGGTCCGTTTGTTT+TGG | - | chr5.3:62469825-62469844 | MS.gene009540:CDS | 45.0% |
!! | AAAAAAAAACTAAATAAATT+TGG | + | chr5.3:62466330-62466349 | None:intergenic | 5.0% |
!!! | TAGTATTTTTATTTTTTTTT+CGG | - | chr5.3:62469800-62469819 | MS.gene009540:intron | 5.0% |
!!! | TCAAAATTTTATATAAAAAA+AGG | + | chr5.3:62469109-62469128 | None:intergenic | 5.0% |
!!! | TTTTTTTATATAAAATTTTG+AGG | - | chr5.3:62469108-62469127 | MS.gene009540:CDS | 5.0% |
AATTCCTCCACCTCCAATGG+AGG | + | chr5.3:62469416-62469435 | None:intergenic | 50.0% | |
AGAAGGAGAACCTGCAAGCT+AGG | + | chr5.3:62467779-62467798 | None:intergenic | 50.0% | |
AGAGTCAAAGGCCAAACGGA+TGG | - | chr5.3:62469724-62469743 | MS.gene009540:intron | 50.0% | |
AGATGGTCCCCTTCACCTTT+AGG | - | chr5.3:62467103-62467122 | MS.gene009540:intron | 50.0% | |
AGGGAACACAATGGCATGCA+AGG | - | chr5.3:62470352-62470371 | MS.gene009540:intron | 50.0% | |
AGTTCAAGGCCTGTGTGATG+GGG | - | chr5.3:62471338-62471357 | MS.gene009540:intron | 50.0% | |
CAAGTTCTTCATCCGTAGGG+TGG | + | chr5.3:62465977-62465996 | None:intergenic | 50.0% | |
CCCAATTTGTACGAGAGCCA+TGG | + | chr5.3:62467712-62467731 | None:intergenic | 50.0% | |
CCCATGGCTCTCGTACAAAT+TGG | - | chr5.3:62467708-62467727 | MS.gene009540:intron | 50.0% | |
GAAGTTCAAGGCCTGTGTGA+TGG | - | chr5.3:62471336-62471355 | MS.gene009540:intron | 50.0% | |
GGAAATTCCTCCACCTCCAA+TGG | + | chr5.3:62469419-62469438 | None:intergenic | 50.0% | |
GGTCAATTTAATCGGGACGG+AGG | - | chr5.3:62470876-62470895 | MS.gene009540:intron | 50.0% | |
GTCAGTTATTCCAGGACGGA+GGG | + | chr5.3:62470677-62470696 | None:intergenic | 50.0% | |
GTTCCATTTCCCCATCACAC+AGG | + | chr5.3:62471350-62471369 | None:intergenic | 50.0% | |
TACTATGCCTCCATTGGAGG+TGG | - | chr5.3:62469406-62469425 | MS.gene009540:intron | 50.0% | |
TCATCACCCCAACTTGTCCT+AGG | + | chr5.3:62468998-62469017 | None:intergenic | 50.0% | |
TCGGGTACTTCCTATCACGA+GGG | + | chr5.3:62467559-62467578 | None:intergenic | 50.0% | |
TTCGGGTACTTCCTATCACG+AGG | + | chr5.3:62467560-62467579 | None:intergenic | 50.0% | |
TTCTCAAGCTCGAGCAGTAG+GGG | - | chr5.3:62467649-62467668 | MS.gene009540:intron | 50.0% | |
! | GGCTTGCTCACCTCACAATA+TGG | - | chr5.3:62468510-62468529 | MS.gene009540:intron | 50.0% |
! | TAGGACAAGTTGGGGTGATG+AGG | - | chr5.3:62468997-62469016 | MS.gene009540:CDS | 50.0% |
! | TGAAACCACTCCTAGCTTGC+AGG | - | chr5.3:62467766-62467785 | MS.gene009540:intron | 50.0% |
!! | AGGTTTCAGGTTCCACCCTA+CGG | - | chr5.3:62465962-62465981 | MS.gene009540:CDS | 50.0% |
!! | CGTGATAGGAAGTACCCGAA+TGG | - | chr5.3:62467560-62467579 | MS.gene009540:intron | 50.0% |
!! | TCTGGGTATTGGAAGGCAAC+CGG | - | chr5.3:62467608-62467627 | MS.gene009540:intron | 50.0% |
ACTTATGCACGGACGGTGCA+AGG | + | chr5.3:62469162-62469181 | None:intergenic | 55.0% | |
AGGCGAGACTTATGCACGGA+CGG | + | chr5.3:62469169-62469188 | None:intergenic | 55.0% | |
GAGAACCTGCAAGCTAGGAG+TGG | + | chr5.3:62467774-62467793 | None:intergenic | 55.0% | |
GCACCTGTTTCATTGCCTCC+AGG | - | chr5.3:62465942-62465961 | MS.gene009540:CDS | 55.0% | |
GGTCAGTTATTCCAGGACGG+AGG | + | chr5.3:62470678-62470697 | None:intergenic | 55.0% | |
GTAGGGTGGAACCTGAAACC+TGG | + | chr5.3:62465963-62465982 | None:intergenic | 55.0% | |
GTATTGGAAGGCAACCGGGA+AGG | - | chr5.3:62467613-62467632 | MS.gene009540:intron | 55.0% | |
GTGTCTAAGCTTGGGGTCCA+AGG | + | chr5.3:62469271-62469290 | None:intergenic | 55.0% | |
TATGCCTCCATTGGAGGTGG+AGG | - | chr5.3:62469409-62469428 | MS.gene009540:intron | 55.0% | |
TTCTCACGTTTGGTTGGGCG+TGG | - | chr5.3:62468753-62468772 | MS.gene009540:intron | 55.0% | |
! | AGGCCTGTGTGATGGGGAAA+TGG | - | chr5.3:62471344-62471363 | MS.gene009540:intron | 55.0% |
! | TTAGCCATGGCTAGCCCATG+TGG | + | chr5.3:62471641-62471660 | None:intergenic | 55.0% |
!! | CTGGGTATTGGAAGGCAACC+GGG | - | chr5.3:62467609-62467628 | MS.gene009540:intron | 55.0% |
!! | TATCGAGGAAGAGCACCCCA+TGG | - | chr5.3:62467692-62467711 | MS.gene009540:intron | 55.0% |
!! | TGTACCACATGGGCTAGCCA+TGG | - | chr5.3:62471634-62471653 | MS.gene009540:CDS | 55.0% |
GAGTACTACTCCCTCCGTCC+TGG | - | chr5.3:62470664-62470683 | MS.gene009540:intron | 60.0% | |
GGGTGGAACCTGAAACCTGG+AGG | + | chr5.3:62465960-62465979 | None:intergenic | 60.0% | |
TGTGAACCGTGGGACTTGCC+AGG | - | chr5.3:62466074-62466093 | MS.gene009540:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.3 | gene | 62465939 | 62471660 | 62465939 | ID=MS.gene009540 |
chr5.3 | mRNA | 62465939 | 62471660 | 62465939 | ID=MS.gene009540.t1;Parent=MS.gene009540 |
chr5.3 | exon | 62471504 | 62471660 | 62471504 | ID=MS.gene009540.t1.exon1;Parent=MS.gene009540.t1 |
chr5.3 | CDS | 62471504 | 62471660 | 62471504 | ID=cds.MS.gene009540.t1;Parent=MS.gene009540.t1 |
chr5.3 | exon | 62469812 | 62470089 | 62469812 | ID=MS.gene009540.t1.exon2;Parent=MS.gene009540.t1 |
chr5.3 | CDS | 62469812 | 62470089 | 62469812 | ID=cds.MS.gene009540.t1;Parent=MS.gene009540.t1 |
chr5.3 | exon | 62468924 | 62469274 | 62468924 | ID=MS.gene009540.t1.exon3;Parent=MS.gene009540.t1 |
chr5.3 | CDS | 62468924 | 62469274 | 62468924 | ID=cds.MS.gene009540.t1;Parent=MS.gene009540.t1 |
chr5.3 | exon | 62467806 | 62468234 | 62467806 | ID=MS.gene009540.t1.exon4;Parent=MS.gene009540.t1 |
chr5.3 | CDS | 62467806 | 62468234 | 62467806 | ID=cds.MS.gene009540.t1;Parent=MS.gene009540.t1 |
chr5.3 | exon | 62467226 | 62467301 | 62467226 | ID=MS.gene009540.t1.exon5;Parent=MS.gene009540.t1 |
chr5.3 | CDS | 62467226 | 62467301 | 62467226 | ID=cds.MS.gene009540.t1;Parent=MS.gene009540.t1 |
chr5.3 | exon | 62465939 | 62466603 | 62465939 | ID=MS.gene009540.t1.exon6;Parent=MS.gene009540.t1 |
chr5.3 | CDS | 62465939 | 62466603 | 62465939 | ID=cds.MS.gene009540.t1;Parent=MS.gene009540.t1 |
Gene Sequence |
Protein sequence |