Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene009578.t1 | XP_003616150.2 | 94.3 | 488 | 28 | 0 | 1 | 488 | 1 | 488 | 6.30E-270 | 939.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene009578.t1 | Q6NQJ8 | 56.6 | 491 | 200 | 6 | 1 | 487 | 1 | 482 | 6.3e-154 | 545.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene009578.t1 | G7KFS1 | 94.3 | 488 | 28 | 0 | 1 | 488 | 1 | 488 | 4.5e-270 | 939.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene009578.t1 | TR | SET |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene009578.t1 | MTR_5g076640 | 94.262 | 488 | 28 | 0 | 1 | 488 | 1 | 488 | 0.0 | 941 |
| MS.gene009578.t1 | MTR_1g077040 | 26.667 | 285 | 177 | 10 | 52 | 315 | 33 | 306 | 9.78e-14 | 73.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene009578.t1 | AT5G17240 | 56.619 | 491 | 200 | 6 | 1 | 487 | 1 | 482 | 0.0 | 559 |
| MS.gene009578.t1 | AT5G17240 | 56.971 | 416 | 170 | 5 | 76 | 487 | 1 | 411 | 5.91e-167 | 478 |
Find 97 sgRNAs with CRISPR-Local
Find 255 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTAGTCATTAAAGCAGATTT+TGG | 0.219025 | 5.3:-61854672 | None:intergenic |
| GTCGGACATCTTGCATATTC+TGG | 0.229958 | 5.3:+61857720 | MS.gene009578:CDS |
| AACATTTAAGGCTTGGGTTT+GGG | 0.237108 | 5.3:+61856681 | MS.gene009578:CDS |
| TTGTTAAACTTATGTCATTC+AGG | 0.257944 | 5.3:+61857898 | MS.gene009578:CDS |
| TTCTTCTCTCTCCTCTGTTC+AGG | 0.263063 | 5.3:+61854746 | MS.gene009578:CDS |
| CTATGGAACATACACAAATT+TGG | 0.272520 | 5.3:+61857503 | MS.gene009578:CDS |
| AGCTTCTTTCCATTCTGATT+TGG | 0.281371 | 5.3:-61856617 | None:intergenic |
| GACTAGTGAGAGTGTTATTA+TGG | 0.303299 | 5.3:+61854689 | MS.gene009578:CDS |
| CAACACTCTCTTTCCTCTCT+TGG | 0.303355 | 5.3:+61854380 | MS.gene009578:CDS |
| CACTTCTACTTCATGGTCTA+AGG | 0.325752 | 5.3:+61857605 | MS.gene009578:CDS |
| TAACATTTAAGGCTTGGGTT+TGG | 0.329689 | 5.3:+61856680 | MS.gene009578:CDS |
| TTGGAGCTTCTTGAACACTA+TGG | 0.346357 | 5.3:+61857522 | MS.gene009578:CDS |
| CATGACTAAAATTTCATTGT+TGG | 0.360753 | 5.3:-61857757 | None:intergenic |
| GGGCAACCCCTCATAATAAA+AGG | 0.361144 | 5.3:+61857691 | MS.gene009578:CDS |
| AGTCGTAACTTTGCGGCAAA+TGG | 0.362498 | 5.3:-61856380 | None:intergenic |
| CTATGTACACTTCTACTTCA+TGG | 0.363522 | 5.3:+61857598 | MS.gene009578:CDS |
| GGTGGAAATTAGCTGTCTTA+TGG | 0.372422 | 5.3:+61858018 | MS.gene009578:CDS |
| GACTACACTCCAATGCATTC+AGG | 0.375734 | 5.3:-61857851 | None:intergenic |
| TAATTAAACAAGTCACCAAC+AGG | 0.396024 | 5.3:-61856988 | None:intergenic |
| GCCTTTCTTGTAATTTGTCC+TGG | 0.398351 | 5.3:-61857172 | None:intergenic |
| TACGACTTGCTAGCCATGTT+TGG | 0.399670 | 5.3:+61856396 | MS.gene009578:CDS |
| GAAAGAAGCTCATGCCTTGA+TGG | 0.405482 | 5.3:+61856630 | MS.gene009578:CDS |
| AGGAAAGAGAGTGTTGAGAT+TGG | 0.416473 | 5.3:-61854373 | None:intergenic |
| ATCATTTCATGAAAGAATCT+AGG | 0.419097 | 5.3:-61858094 | None:intergenic |
| GCACCTGGAGAGGACCTATC+TGG | 0.423204 | 5.3:+61857015 | MS.gene009578:CDS |
| AGAATGGTGCAGTAGAGGTT+TGG | 0.431010 | 5.3:+61854605 | MS.gene009578:intron |
| TTCTAGCTGCGTTACGATTG+TGG | 0.436159 | 5.3:+61857670 | MS.gene009578:CDS |
| GATTGGTCGGTGTTTGTTGT+TGG | 0.440882 | 5.3:-61854356 | None:intergenic |
| ATGAAATGGTTGTCGAAAAC+TGG | 0.444870 | 5.3:+61857777 | MS.gene009578:CDS |
| CTTGTTATACGAAGTTGGTA+AGG | 0.457725 | 5.3:+61856326 | MS.gene009578:CDS |
| TCTAGCTGCGTTACGATTGT+GGG | 0.460277 | 5.3:+61857671 | MS.gene009578:CDS |
| GTTTGCTTGTTATACGAAGT+TGG | 0.462021 | 5.3:+61856321 | MS.gene009578:CDS |
| CTACCTTTCCTCACTCTGGC+GGG | 0.467292 | 5.3:+61854420 | MS.gene009578:CDS |
| GAATGGTGCAGTAGAGGTTT+GGG | 0.467488 | 5.3:+61854606 | MS.gene009578:intron |
| GTGCTGTGAGAGATCTTAAG+AGG | 0.468743 | 5.3:+61854628 | MS.gene009578:CDS |
| CACCAGGTTCTATTATGCTA+TGG | 0.472726 | 5.3:+61857486 | MS.gene009578:intron |
| TTGGGTTTGGGCTGCTGCAA+CGG | 0.478013 | 5.3:+61856693 | MS.gene009578:CDS |
| CTCCAATGCATTCAGGAGTA+AGG | 0.484839 | 5.3:-61857844 | None:intergenic |
| TGTTAAACTTATGTCATTCA+GGG | 0.485910 | 5.3:+61857899 | MS.gene009578:CDS |
| TATGAAAACGAGAAGGTCAA+TGG | 0.486866 | 5.3:+61857992 | MS.gene009578:CDS |
| AAATGGACACAAGAATGAAA+TGG | 0.495995 | 5.3:+61857065 | MS.gene009578:CDS |
| AACTTTGCGGCAAATGGACG+AGG | 0.497147 | 5.3:-61856374 | None:intergenic |
| TGCGGCAAATGGACGAGGTA+AGG | 0.498856 | 5.3:-61856369 | None:intergenic |
| AGCTATGTCTTGCTGTCAAT+AGG | 0.499734 | 5.3:+61854721 | MS.gene009578:CDS |
| GCTAGCAAGTCGTAACTTTG+CGG | 0.510142 | 5.3:-61856387 | None:intergenic |
| GTTTCTACCTTTCCTCACTC+TGG | 0.514945 | 5.3:+61854416 | MS.gene009578:CDS |
| TAGCTGTCTTATGGAGGCTC+GGG | 0.520018 | 5.3:+61858027 | MS.gene009578:CDS |
| GCCAGGACAAATTACAAGAA+AGG | 0.522389 | 5.3:+61857171 | MS.gene009578:CDS |
| AAGAGAGTGTTGAGATTGGT+CGG | 0.523760 | 5.3:-61854369 | None:intergenic |
| TTAGCTGTCTTATGGAGGCT+CGG | 0.525826 | 5.3:+61858026 | MS.gene009578:CDS |
| GAATGTATCTCTTATTGCAA+TGG | 0.527122 | 5.3:+61858068 | MS.gene009578:CDS |
| TATATTATGAGCTTCTAAGA+AGG | 0.528878 | 5.3:-61857934 | None:intergenic |
| GCTGGTTGTTTATGCCCTGT+TGG | 0.537691 | 5.3:+61856973 | MS.gene009578:CDS |
| TTTCTCAAATTCACCAAACA+TGG | 0.542605 | 5.3:-61856409 | None:intergenic |
| TACCTTACTCCTGAATGCAT+TGG | 0.549106 | 5.3:+61857842 | MS.gene009578:CDS |
| GAAGTAGAAGTGTACATAGC+AGG | 0.549201 | 5.3:-61857594 | None:intergenic |
| AAACATGAGTTCCTCCATCA+AGG | 0.553023 | 5.3:-61856644 | None:intergenic |
| CTCAGAGACTAACTGATGGT+GGG | 0.556902 | 5.3:+61857115 | MS.gene009578:CDS |
| TTGTTTAATTACGATGCACC+TGG | 0.559289 | 5.3:+61857000 | MS.gene009578:CDS |
| ATACCAGATAGGTCCTCTCC+AGG | 0.561435 | 5.3:-61857018 | None:intergenic |
| TCTCAGAGACTAACTGATGG+TGG | 0.562053 | 5.3:+61857114 | MS.gene009578:CDS |
| AAGAACATGGAAGCTTTGAA+AGG | 0.566087 | 5.3:+61854294 | MS.gene009578:CDS |
| GTGTACATAGCAGGTTCCAA+AGG | 0.569923 | 5.3:-61857585 | None:intergenic |
| TCTACCTTTCCTCACTCTGG+CGG | 0.572108 | 5.3:+61854419 | MS.gene009578:CDS |
| AAATTACAAGAAAGGCGACC+AGG | 0.572285 | 5.3:+61857179 | MS.gene009578:CDS |
| CTCGGACATTGCATATACCA+TGG | 0.573706 | 5.3:+61856944 | MS.gene009578:CDS |
| CTACGTCGTCAATACCAGAT+AGG | 0.574667 | 5.3:-61857029 | None:intergenic |
| CGAGAAGGTCAATGGATAGG+TGG | 0.576592 | 5.3:+61858000 | MS.gene009578:CDS |
| TTGTTATACGAAGTTGGTAA+GGG | 0.583923 | 5.3:+61856327 | MS.gene009578:CDS |
| GCTTTGAAAGGTTCTTAACA+TGG | 0.587490 | 5.3:+61854306 | MS.gene009578:CDS |
| TCGGACATTGCATATACCAT+GGG | 0.588653 | 5.3:+61856945 | MS.gene009578:CDS |
| GTATCGTCTTCAATAGATGT+TGG | 0.593968 | 5.3:-61857822 | None:intergenic |
| TAGAAGATGGAACAAGAACA+TGG | 0.594815 | 5.3:+61854281 | None:intergenic |
| TAATTACGATGCACCTGGAG+AGG | 0.595408 | 5.3:+61857005 | MS.gene009578:CDS |
| TGCTGTGAGAGATCTTAAGA+GGG | 0.596123 | 5.3:+61854629 | MS.gene009578:CDS |
| GGAAATTAGCTGTCTTATGG+AGG | 0.596583 | 5.3:+61858021 | MS.gene009578:CDS |
| TGTACATAGCAGGTTCCAAA+GGG | 0.596868 | 5.3:-61857584 | None:intergenic |
| CATATACCATGGGATGAAGC+TGG | 0.602506 | 5.3:+61856955 | MS.gene009578:CDS |
| CATAATAAAAGGAGGTCTGT+CGG | 0.606789 | 5.3:+61857702 | MS.gene009578:CDS |
| AAACGAGAAGGTCAATGGAT+AGG | 0.609984 | 5.3:+61857997 | MS.gene009578:CDS |
| TGGAGTTACCCGCCAGAGTG+AGG | 0.610390 | 5.3:-61854428 | None:intergenic |
| AATTCTCAGAGACTAACTGA+TGG | 0.621388 | 5.3:+61857111 | MS.gene009578:CDS |
| GCAGAGAGAATGACCAAGAG+AGG | 0.631070 | 5.3:-61854393 | None:intergenic |
| AGAAGCTCATGCCTTGATGG+AGG | 0.631236 | 5.3:+61856633 | MS.gene009578:CDS |
| AAACAACCAGCTTCATCCCA+TGG | 0.633574 | 5.3:-61856961 | None:intergenic |
| TTTCATCTATGAAAACGAGA+AGG | 0.633735 | 5.3:+61857985 | MS.gene009578:CDS |
| TTGGTGAATCTGATATTCCA+AGG | 0.633842 | 5.3:-61854337 | None:intergenic |
| GCAGCTAGAAGCGCAAACGA+AGG | 0.634016 | 5.3:-61857657 | None:intergenic |
| ATCAGGTGGATGAAGCTATG+TGG | 0.641575 | 5.3:+61856569 | MS.gene009578:intron |
| TTAACATGGACATCACACCT+TGG | 0.645130 | 5.3:+61854320 | MS.gene009578:CDS |
| TCACTCTATATCCATCCCAA+CGG | 0.653728 | 5.3:+61857630 | MS.gene009578:CDS |
| TTACCCGCCAGAGTGAGGAA+AGG | 0.662573 | 5.3:-61854423 | None:intergenic |
| CAACCCCTCATAATAAAAGG+AGG | 0.668522 | 5.3:+61857694 | MS.gene009578:CDS |
| AATAAGAGATACATTCAATG+AGG | 0.670385 | 5.3:-61858061 | None:intergenic |
| GTAAGGGAAAGACTTCAAGA+TGG | 0.690936 | 5.3:+61856343 | MS.gene009578:CDS |
| GCTGTGAGAGATCTTAAGAG+GGG | 0.713261 | 5.3:+61854630 | MS.gene009578:CDS |
| AATTAAACAAGTCACCAACA+GGG | 0.716642 | 5.3:-61856987 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTAAATACAAAAAACTAT+TGG | - | chr5.3:61854897-61854916 | None:intergenic | 10.0% |
| !! | TGTAATTGTAATAAAAAAAA+AGG | - | chr5.3:61854474-61854493 | None:intergenic | 10.0% |
| !!! | ATTTAATTTTTGAAATTGTA+AGG | + | chr5.3:61854909-61854928 | MS.gene009578:intron | 10.0% |
| !!! | ATTTATGATAAATTTTATTC+AGG | - | chr5.3:61857276-61857295 | None:intergenic | 10.0% |
| !!! | TTTATGATAAATTTTATTCA+GGG | - | chr5.3:61857275-61857294 | None:intergenic | 10.0% |
| !! | CAATAATTCTAACAAAAAAT+TGG | - | chr5.3:61856166-61856185 | None:intergenic | 15.0% |
| !! | TCGAATTGAAAATATTTATA+TGG | - | chr5.3:61857388-61857407 | None:intergenic | 15.0% |
| !!! | AAAAATGTAAAGTTTTGAAT+TGG | - | chr5.3:61854451-61854470 | None:intergenic | 15.0% |
| !! | AATTGAATATGTAAACCTAA+TGG | - | chr5.3:61857236-61857255 | None:intergenic | 20.0% |
| !! | ATTCTAACAAAAAATTGGAT+TGG | - | chr5.3:61856161-61856180 | None:intergenic | 20.0% |
| !! | GAAAGGTAATTAAAATTAAG+AGG | - | chr5.3:61856125-61856144 | None:intergenic | 20.0% |
| !! | TGATGTATGATTTCAATTTA+GGG | + | chr5.3:61855059-61855078 | MS.gene009578:intron | 20.0% |
| !!! | ATAAGTTATTTCTATAGCAA+AGG | - | chr5.3:61856017-61856036 | None:intergenic | 20.0% |
| !!! | ATGAAATTTTAGTCATGAAA+TGG | + | chr5.3:61857763-61857782 | MS.gene009578:CDS | 20.0% |
| !!! | ATTTTTTAGTTTATCTCGTT+AGG | + | chr5.3:61856461-61856480 | MS.gene009578:intron | 20.0% |
| !!! | GAAATTTTAACATAACCATT+AGG | + | chr5.3:61857218-61857237 | MS.gene009578:intron | 20.0% |
| !!! | GTAGATAATTTTCAATCAAA+TGG | + | chr5.3:61857048-61857067 | MS.gene009578:CDS | 20.0% |
| !!! | TAAGTTATTTCTATAGCAAA+GGG | - | chr5.3:61856016-61856035 | None:intergenic | 20.0% |
| ! | AACAAATTGAGGACTATAAA+AGG | - | chr5.3:61855207-61855226 | None:intergenic | 25.0% |
| ! | AATAAGAGATACATTCAATG+AGG | - | chr5.3:61858064-61858083 | None:intergenic | 25.0% |
| ! | ACTAAATTAACCGATCTAAA+GGG | - | chr5.3:61855011-61855030 | None:intergenic | 25.0% |
| ! | ATGTTGTAACAGACTTATTT+CGG | + | chr5.3:61856750-61856769 | MS.gene009578:intron | 25.0% |
| ! | ATTGAAATCATACATCACAT+TGG | - | chr5.3:61855056-61855075 | None:intergenic | 25.0% |
| ! | CATGACTAAAATTTCATTGT+TGG | - | chr5.3:61857760-61857779 | None:intergenic | 25.0% |
| ! | GTGATGTATGATTTCAATTT+AGG | + | chr5.3:61855058-61855077 | MS.gene009578:intron | 25.0% |
| ! | TGTTAAACTTATGTCATTCA+GGG | + | chr5.3:61857899-61857918 | MS.gene009578:CDS | 25.0% |
| ! | TGTTAGAATTATTGTATGCA+TGG | + | chr5.3:61856172-61856191 | MS.gene009578:intron | 25.0% |
| ! | TTCATTTAAGTCAGTATTCT+TGG | - | chr5.3:61855142-61855161 | None:intergenic | 25.0% |
| ! | TTGGTTCAATAAACAATGAA+AGG | - | chr5.3:61856142-61856161 | None:intergenic | 25.0% |
| ! | TTGTTAAACTTATGTCATTC+AGG | + | chr5.3:61857898-61857917 | MS.gene009578:CDS | 25.0% |
| ! | TTTACTCATGACAACTAAAA+TGG | - | chr5.3:61856862-61856881 | None:intergenic | 25.0% |
| !! | TAGGTTAGATTATAGCATTT+TGG | + | chr5.3:61856480-61856499 | MS.gene009578:intron | 25.0% |
| !! | TATATTATGAGCTTCTAAGA+AGG | - | chr5.3:61857937-61857956 | None:intergenic | 25.0% |
| !!! | AAACTTTGCATTTGTTTTCT+TGG | + | chr5.3:61854493-61854512 | MS.gene009578:intron | 25.0% |
| !!! | AACTTTGCATTTGTTTTCTT+GGG | + | chr5.3:61854494-61854513 | MS.gene009578:intron | 25.0% |
| !!! | AGTTTTTAACATTTAAGGCT+TGG | + | chr5.3:61856674-61856693 | MS.gene009578:CDS | 25.0% |
| !!! | CATCTTAATTTGTGATTATC+AGG | + | chr5.3:61856552-61856571 | MS.gene009578:intron | 25.0% |
| !!! | GCTGTTTTCATAAGTTATAT+TGG | - | chr5.3:61855960-61855979 | None:intergenic | 25.0% |
| !!! | GTTTTTAACATTTAAGGCTT+GGG | + | chr5.3:61856675-61856694 | MS.gene009578:CDS | 25.0% |
| !!! | TGTTGAACATTGATTCATTT+TGG | + | chr5.3:61856791-61856810 | MS.gene009578:intron | 25.0% |
| AAATGGACACAAGAATGAAA+TGG | + | chr5.3:61857065-61857084 | MS.gene009578:CDS | 30.0% | |
| AACTTAACATGCTTGACATT+TGG | - | chr5.3:61855724-61855743 | None:intergenic | 30.0% | |
| AATTAAACAAGTCACCAACA+GGG | - | chr5.3:61856990-61857009 | None:intergenic | 30.0% | |
| ACCTAATTAACAGGTGATAA+TGG | + | chr5.3:61854865-61854884 | MS.gene009578:intron | 30.0% | |
| ATCATTCCCTATCTACTAAA+TGG | - | chr5.3:61857451-61857470 | None:intergenic | 30.0% | |
| ATTCCACCATTTAGTAGATA+GGG | + | chr5.3:61857442-61857461 | MS.gene009578:intron | 30.0% | |
| ATTGTATGCATGGTTAAATC+AGG | + | chr5.3:61856182-61856201 | MS.gene009578:intron | 30.0% | |
| CCAAAACAGTACAACAAAAA+GGG | - | chr5.3:61854585-61854604 | None:intergenic | 30.0% | |
| CTATGGAACATACACAAATT+TGG | + | chr5.3:61857503-61857522 | MS.gene009578:CDS | 30.0% | |
| GAATGTATCTCTTATTGCAA+TGG | + | chr5.3:61858068-61858087 | MS.gene009578:CDS | 30.0% | |
| GACTAAATTAACCGATCTAA+AGG | - | chr5.3:61855012-61855031 | None:intergenic | 30.0% | |
| GCCTTAAATGTTAAAAACTG+AGG | - | chr5.3:61856673-61856692 | None:intergenic | 30.0% | |
| TAATTAAACAAGTCACCAAC+AGG | - | chr5.3:61856991-61857010 | None:intergenic | 30.0% | |
| TACAAAAAGCCAAATCAGAA+TGG | + | chr5.3:61856608-61856627 | MS.gene009578:CDS | 30.0% | |
| TCAAAAACCAGATATCTTCT+CGG | + | chr5.3:61856926-61856945 | MS.gene009578:intron | 30.0% | |
| TCCAAAACAGTACAACAAAA+AGG | - | chr5.3:61854586-61854605 | None:intergenic | 30.0% | |
| TCCATTATCACCTGTTAATT+AGG | - | chr5.3:61854869-61854888 | None:intergenic | 30.0% | |
| TTCTTGGGTGATTAATCAAA+GGG | + | chr5.3:61854509-61854528 | MS.gene009578:intron | 30.0% | |
| TTTCATCTATGAAAACGAGA+AGG | + | chr5.3:61857985-61858004 | MS.gene009578:CDS | 30.0% | |
| TTTCTCAAATTCACCAAACA+TGG | - | chr5.3:61856412-61856431 | None:intergenic | 30.0% | |
| TTTCTTGGGTGATTAATCAA+AGG | + | chr5.3:61854508-61854527 | MS.gene009578:intron | 30.0% | |
| TTTGTAATTTCCTTAACTGC+AGG | - | chr5.3:61854951-61854970 | None:intergenic | 30.0% | |
| ! | AGGTAATTTGGTTTATGAAC+TGG | - | chr5.3:61855785-61855804 | None:intergenic | 30.0% |
| ! | CTAGTCATTAAAGCAGATTT+TGG | - | chr5.3:61854675-61854694 | None:intergenic | 30.0% |
| ! | GCCTCAGTTTTTAACATTTA+AGG | + | chr5.3:61856669-61856688 | MS.gene009578:CDS | 30.0% |
| ! | GGGATGAAAATTTTGTCATT+CGG | - | chr5.3:61857567-61857586 | None:intergenic | 30.0% |
| ! | TGACAAAATTTTCATCCCTT+TGG | + | chr5.3:61857569-61857588 | MS.gene009578:CDS | 30.0% |
| ! | TGTTGACTATGAACTATTAC+AGG | + | chr5.3:61857345-61857364 | MS.gene009578:intron | 30.0% |
| !! | ATAAGTTTTGTGAGACTGTT+TGG | + | chr5.3:61855869-61855888 | MS.gene009578:intron | 30.0% |
| !! | CTTAATTTGTGATTATCAGG+TGG | + | chr5.3:61856555-61856574 | MS.gene009578:intron | 30.0% |
| !! | TAAGTTTTGTGAGACTGTTT+GGG | + | chr5.3:61855870-61855889 | MS.gene009578:intron | 30.0% |
| !! | TTGTTATACGAAGTTGGTAA+GGG | + | chr5.3:61856327-61856346 | MS.gene009578:CDS | 30.0% |
| !! | TTTTGTACAGCTTTTTCTGT+TGG | - | chr5.3:61856595-61856614 | None:intergenic | 30.0% |
| AAGAACAAAAACCTGAACAG+AGG | - | chr5.3:61854760-61854779 | None:intergenic | 35.0% | |
| AATAGAACCTGGTGAAAACA+AGG | - | chr5.3:61857480-61857499 | None:intergenic | 35.0% | |
| AATTCTCAGAGACTAACTGA+TGG | + | chr5.3:61857111-61857130 | MS.gene009578:CDS | 35.0% | |
| ACAAATTGTTGCCTGTCTTA+TGG | + | chr5.3:61857321-61857340 | MS.gene009578:intron | 35.0% | |
| AGCTTCTTTCCATTCTGATT+TGG | - | chr5.3:61856620-61856639 | None:intergenic | 35.0% | |
| ATAAGCGCTCATCATGATAA+GGG | + | chr5.3:61856039-61856058 | MS.gene009578:intron | 35.0% | |
| ATAGTCAACATCCATAAGAC+AGG | - | chr5.3:61857335-61857354 | None:intergenic | 35.0% | |
| ATGAAATGGTTGTCGAAAAC+TGG | + | chr5.3:61857777-61857796 | MS.gene009578:CDS | 35.0% | |
| ATTCCCTATCTACTAAATGG+TGG | - | chr5.3:61857448-61857467 | None:intergenic | 35.0% | |
| ATTGCACACTTCAGGTAATT+TGG | - | chr5.3:61855797-61855816 | None:intergenic | 35.0% | |
| CATAATAAAAGGAGGTCTGT+CGG | + | chr5.3:61857702-61857721 | MS.gene009578:CDS | 35.0% | |
| CATTCCACCATTTAGTAGAT+AGG | + | chr5.3:61857441-61857460 | MS.gene009578:intron | 35.0% | |
| CTATGTACACTTCTACTTCA+TGG | + | chr5.3:61857598-61857617 | MS.gene009578:CDS | 35.0% | |
| GAAACCAAATCCTAACAAGT+AGG | - | chr5.3:61856215-61856234 | None:intergenic | 35.0% | |
| GTATCGTCTTCAATAGATGT+TGG | - | chr5.3:61857825-61857844 | None:intergenic | 35.0% | |
| TATGAAAACGAGAAGGTCAA+TGG | + | chr5.3:61857992-61858011 | MS.gene009578:CDS | 35.0% | |
| TGAAGATAGAGCGAAAACAA+TGG | - | chr5.3:61857423-61857442 | None:intergenic | 35.0% | |
| TGTGCAATGTTAGAGACTAA+TGG | + | chr5.3:61855809-61855828 | MS.gene009578:intron | 35.0% | |
| TTAACATGCTTGACATTTGG+TGG | - | chr5.3:61855721-61855740 | None:intergenic | 35.0% | |
| TTAGAGACTAATGGTCTGTT+TGG | + | chr5.3:61855818-61855837 | MS.gene009578:intron | 35.0% | |
| TTCCATAGCATAATAGAACC+TGG | - | chr5.3:61857491-61857510 | None:intergenic | 35.0% | |
| TTGGTGAATCTGATATTCCA+AGG | - | chr5.3:61854340-61854359 | None:intergenic | 35.0% | |
| TTGTTTAATTACGATGCACC+TGG | + | chr5.3:61857000-61857019 | MS.gene009578:CDS | 35.0% | |
| ! | AACATTTAAGGCTTGGGTTT+GGG | + | chr5.3:61856681-61856700 | MS.gene009578:CDS | 35.0% |
| ! | ACAGACCTCCTTTTATTATG+AGG | - | chr5.3:61857702-61857721 | None:intergenic | 35.0% |
| ! | AGACCTCCTTTTATTATGAG+GGG | - | chr5.3:61857700-61857719 | None:intergenic | 35.0% |
| ! | ATTTGGTTTATGAACTGGAC+TGG | - | chr5.3:61855780-61855799 | None:intergenic | 35.0% |
| ! | CAGACCTCCTTTTATTATGA+GGG | - | chr5.3:61857701-61857720 | None:intergenic | 35.0% |
| ! | GCTTTAAGCTGCAAATAAGT+TGG | + | chr5.3:61856067-61856086 | MS.gene009578:intron | 35.0% |
| ! | TAACATTTAAGGCTTGGGTT+TGG | + | chr5.3:61856680-61856699 | MS.gene009578:CDS | 35.0% |
| !! | AAGAACATGGAAGCTTTGAA+AGG | + | chr5.3:61854294-61854313 | MS.gene009578:CDS | 35.0% |
| !! | AATAAGTTGGTTGTCCAAAC+AGG | + | chr5.3:61856080-61856099 | MS.gene009578:intron | 35.0% |
| !! | ATGCATATTGCTTTTATGCC+AGG | + | chr5.3:61857154-61857173 | MS.gene009578:CDS | 35.0% |
| !! | CCCTTTTTGTTGTACTGTTT+TGG | + | chr5.3:61854582-61854601 | MS.gene009578:intron | 35.0% |
| !! | CCTCAATTTGTTGACTTGAT+GGG | + | chr5.3:61855215-61855234 | MS.gene009578:intron | 35.0% |
| !! | CTTGTTATACGAAGTTGGTA+AGG | + | chr5.3:61856326-61856345 | MS.gene009578:CDS | 35.0% |
| !! | GACTAGTGAGAGTGTTATTA+TGG | + | chr5.3:61854689-61854708 | MS.gene009578:CDS | 35.0% |
| !! | GCTTTGAAAGGTTCTTAACA+TGG | + | chr5.3:61854306-61854325 | MS.gene009578:CDS | 35.0% |
| !! | GTTTGCTTGTTATACGAAGT+TGG | + | chr5.3:61856321-61856340 | MS.gene009578:CDS | 35.0% |
| !! | TCCTCAATTTGTTGACTTGA+TGG | + | chr5.3:61855214-61855233 | MS.gene009578:intron | 35.0% |
| !! | TTTATGAACTGGACTGGTAT+GGG | - | chr5.3:61855774-61855793 | None:intergenic | 35.0% |
| !!! | TAAGTTACCTTGTTTTCACC+AGG | + | chr5.3:61857470-61857489 | MS.gene009578:intron | 35.0% |
| !!! | TGTTGTACTGTTTTGGAGAA+TGG | + | chr5.3:61854589-61854608 | MS.gene009578:intron | 35.0% |
| AAACATGAGTTCCTCCATCA+AGG | - | chr5.3:61856647-61856666 | None:intergenic | 40.0% | |
| AAACGAGAAGGTCAATGGAT+AGG | + | chr5.3:61857997-61858016 | MS.gene009578:CDS | 40.0% | |
| AAATTACAAGAAAGGCGACC+AGG | + | chr5.3:61857179-61857198 | MS.gene009578:CDS | 40.0% | |
| AACAGAGTCTGATCAAGAGA+CGG | + | chr5.3:61854842-61854861 | MS.gene009578:intron | 40.0% | |
| AAGAGACGGACCTAATTAAC+AGG | + | chr5.3:61854856-61854875 | MS.gene009578:intron | 40.0% | |
| ACATCACATTGGACTCATGA+AGG | - | chr5.3:61855045-61855064 | None:intergenic | 40.0% | |
| ACCAAACGTCAAGCATGTTA+AGG | + | chr5.3:61855649-61855668 | MS.gene009578:intron | 40.0% | |
| CAACCCCTCATAATAAAAGG+AGG | + | chr5.3:61857694-61857713 | MS.gene009578:CDS | 40.0% | |
| CACCAGGTTCTATTATGCTA+TGG | + | chr5.3:61857486-61857505 | MS.gene009578:intron | 40.0% | |
| CACTTCTACTTCATGGTCTA+AGG | + | chr5.3:61857605-61857624 | MS.gene009578:CDS | 40.0% | |
| CATAAGCGCTCATCATGATA+AGG | + | chr5.3:61856038-61856057 | MS.gene009578:intron | 40.0% | |
| CATTGATCCTAGTACCAGAA+AGG | - | chr5.3:61856733-61856752 | None:intergenic | 40.0% | |
| CCCATCAAGTCAACAAATTG+AGG | - | chr5.3:61855218-61855237 | None:intergenic | 40.0% | |
| CTTGACCATTTAGACCTGTT+TGG | - | chr5.3:61856097-61856116 | None:intergenic | 40.0% | |
| GACAAGTAATGCGCATGAAA+AGG | - | chr5.3:61856828-61856847 | None:intergenic | 40.0% | |
| GACTAATGGTCTGTTTGGAT+TGG | + | chr5.3:61855823-61855842 | MS.gene009578:intron | 40.0% | |
| GCCAGGACAAATTACAAGAA+AGG | + | chr5.3:61857171-61857190 | MS.gene009578:CDS | 40.0% | |
| GCTACAACTGTGCATGAATT+AGG | + | chr5.3:61855261-61855280 | MS.gene009578:intron | 40.0% | |
| GGAAATTAGCTGTCTTATGG+AGG | + | chr5.3:61858021-61858040 | MS.gene009578:CDS | 40.0% | |
| GGTGGAAATTAGCTGTCTTA+TGG | + | chr5.3:61858018-61858037 | MS.gene009578:CDS | 40.0% | |
| GTAAGGGAAAGACTTCAAGA+TGG | + | chr5.3:61856343-61856362 | MS.gene009578:CDS | 40.0% | |
| GTATAGACAACCATACCATG+TGG | - | chr5.3:61855616-61855635 | None:intergenic | 40.0% | |
| GTTGTCCAAACAGGTCTAAA+TGG | + | chr5.3:61856089-61856108 | MS.gene009578:intron | 40.0% | |
| TACCTTACTCCTGAATGCAT+TGG | + | chr5.3:61857842-61857861 | MS.gene009578:CDS | 40.0% | |
| TCACTCTATATCCATCCCAA+CGG | + | chr5.3:61857630-61857649 | MS.gene009578:CDS | 40.0% | |
| TCGGACATTGCATATACCAT+GGG | + | chr5.3:61856945-61856964 | MS.gene009578:CDS | 40.0% | |
| TCTCTAACATTGCACACTTC+AGG | - | chr5.3:61855805-61855824 | None:intergenic | 40.0% | |
| TGCTGTGAGAGATCTTAAGA+GGG | + | chr5.3:61854629-61854648 | MS.gene009578:CDS | 40.0% | |
| TGTACATAGCAGGTTCCAAA+GGG | - | chr5.3:61857587-61857606 | None:intergenic | 40.0% | |
| TTAACATGCTTGACGTTTGG+TGG | - | chr5.3:61855650-61855669 | None:intergenic | 40.0% | |
| TTAACATGGACATCACACCT+TGG | + | chr5.3:61854320-61854339 | MS.gene009578:CDS | 40.0% | |
| TTAGTAAGCTCATGCCTTTC+TGG | + | chr5.3:61856716-61856735 | MS.gene009578:intron | 40.0% | |
| TTGGAGCTTCTTGAACACTA+TGG | + | chr5.3:61857522-61857541 | MS.gene009578:CDS | 40.0% | |
| TTGTTCACGTGTTACAACAG+TGG | + | chr5.3:61855098-61855117 | MS.gene009578:intron | 40.0% | |
| ! | AGCTATGTCTTGCTGTCAAT+AGG | + | chr5.3:61854721-61854740 | MS.gene009578:CDS | 40.0% |
| ! | GAAGTAGAAGTGTACATAGC+AGG | - | chr5.3:61857597-61857616 | None:intergenic | 40.0% |
| ! | GACAGGCAACAATTTGTTTC+TGG | - | chr5.3:61857318-61857337 | None:intergenic | 40.0% |
| ! | GCCTTTCTTGTAATTTGTCC+TGG | - | chr5.3:61857175-61857194 | None:intergenic | 40.0% |
| ! | TGAGCCTACTTGTTAGGATT+TGG | + | chr5.3:61856208-61856227 | MS.gene009578:intron | 40.0% |
| !! | AAGAGAGTGTTGAGATTGGT+CGG | - | chr5.3:61854372-61854391 | None:intergenic | 40.0% |
| !! | ACATTTGGTGGACTGTAAAC+TGG | - | chr5.3:61855709-61855728 | None:intergenic | 40.0% |
| !! | AGGAAAGAGAGTGTTGAGAT+TGG | - | chr5.3:61854376-61854395 | None:intergenic | 40.0% |
| !! | GTTTATGAACTGGACTGGTA+TGG | - | chr5.3:61855775-61855794 | None:intergenic | 40.0% |
| AAACAACCAGCTTCATCCCA+TGG | - | chr5.3:61856964-61856983 | None:intergenic | 45.0% | |
| AGAATGGTGCAGTAGAGGTT+TGG | + | chr5.3:61854605-61854624 | MS.gene009578:intron | 45.0% | |
| AGGTCGTGAGACACTTGAAT+GGG | + | chr5.3:61855410-61855429 | MS.gene009578:intron | 45.0% | |
| AGTCGTAACTTTGCGGCAAA+TGG | - | chr5.3:61856383-61856402 | None:intergenic | 45.0% | |
| ATATAGCGAGCCACATGGTA+TGG | + | chr5.3:61855603-61855622 | MS.gene009578:intron | 45.0% | |
| ATCAGGTGGATGAAGCTATG+TGG | + | chr5.3:61856569-61856588 | MS.gene009578:intron | 45.0% | |
| ATTGTAAGGAGCAGACGATC+TGG | + | chr5.3:61854923-61854942 | MS.gene009578:intron | 45.0% | |
| CAACACTCTCTTTCCTCTCT+TGG | + | chr5.3:61854380-61854399 | MS.gene009578:CDS | 45.0% | |
| CATATACCATGGGATGAAGC+TGG | + | chr5.3:61856955-61856974 | MS.gene009578:CDS | 45.0% | |
| CATTATTCGTACGTGACACG+TGG | + | chr5.3:61855339-61855358 | MS.gene009578:intron | 45.0% | |
| CTACGTCGTCAATACCAGAT+AGG | - | chr5.3:61857032-61857051 | None:intergenic | 45.0% | |
| CTCAGAGACTAACTGATGGT+GGG | + | chr5.3:61857115-61857134 | MS.gene009578:CDS | 45.0% | |
| CTCCAATGCATTCAGGAGTA+AGG | - | chr5.3:61857847-61857866 | None:intergenic | 45.0% | |
| CTCGGACATTGCATATACCA+TGG | + | chr5.3:61856944-61856963 | MS.gene009578:CDS | 45.0% | |
| GAAAGAAGCTCATGCCTTGA+TGG | + | chr5.3:61856630-61856649 | MS.gene009578:CDS | 45.0% | |
| GAATGGTGCAGTAGAGGTTT+GGG | + | chr5.3:61854606-61854625 | MS.gene009578:intron | 45.0% | |
| GACTACACTCCAATGCATTC+AGG | - | chr5.3:61857854-61857873 | None:intergenic | 45.0% | |
| GCAATGTCCGAGAAGATATC+TGG | - | chr5.3:61856936-61856955 | None:intergenic | 45.0% | |
| GCCTTAACATGCTTGACGTT+TGG | - | chr5.3:61855653-61855672 | None:intergenic | 45.0% | |
| GCTAGCAAGTCGTAACTTTG+CGG | - | chr5.3:61856390-61856409 | None:intergenic | 45.0% | |
| GCTGTGAGAGATCTTAAGAG+GGG | + | chr5.3:61854630-61854649 | MS.gene009578:CDS | 45.0% | |
| GGGCAACCCCTCATAATAAA+AGG | + | chr5.3:61857691-61857710 | MS.gene009578:CDS | 45.0% | |
| GTCGGACATCTTGCATATTC+TGG | + | chr5.3:61857720-61857739 | MS.gene009578:CDS | 45.0% | |
| GTGCTGTGAGAGATCTTAAG+AGG | + | chr5.3:61854628-61854647 | MS.gene009578:CDS | 45.0% | |
| GTGTACATAGCAGGTTCCAA+AGG | - | chr5.3:61857588-61857607 | None:intergenic | 45.0% | |
| GTTTCTACCTTTCCTCACTC+TGG | + | chr5.3:61854416-61854435 | MS.gene009578:CDS | 45.0% | |
| TAATTACGATGCACCTGGAG+AGG | + | chr5.3:61857005-61857024 | MS.gene009578:CDS | 45.0% | |
| TCAAGATATAGCGAGCCACA+TGG | + | chr5.3:61855598-61855617 | MS.gene009578:intron | 45.0% | |
| TCGCTCTAGTCCCTTTAGAT+CGG | + | chr5.3:61854998-61855017 | MS.gene009578:intron | 45.0% | |
| TCTAGCTGCGTTACGATTGT+GGG | + | chr5.3:61857671-61857690 | MS.gene009578:CDS | 45.0% | |
| TCTCAGAGACTAACTGATGG+TGG | + | chr5.3:61857114-61857133 | MS.gene009578:CDS | 45.0% | |
| TTAGCTGTCTTATGGAGGCT+CGG | + | chr5.3:61858026-61858045 | MS.gene009578:CDS | 45.0% | |
| TTCTTCTCTCTCCTCTGTTC+AGG | + | chr5.3:61854746-61854765 | MS.gene009578:CDS | 45.0% | |
| TTTGGAGAATGGTGCAGTAG+AGG | + | chr5.3:61854600-61854619 | MS.gene009578:intron | 45.0% | |
| ! | GCAAACGAAGGTTTTCCGTT+GGG | - | chr5.3:61857648-61857667 | None:intergenic | 45.0% |
| ! | TTCTAGCTGCGTTACGATTG+TGG | + | chr5.3:61857670-61857689 | MS.gene009578:CDS | 45.0% |
| !! | AGGCATTGAGCCTACTTGTT+AGG | + | chr5.3:61856202-61856221 | MS.gene009578:intron | 45.0% |
| !! | CTGTGCAAATCAGCTTGTTG+TGG | - | chr5.3:61855437-61855456 | None:intergenic | 45.0% |
| !! | GATTGGTCGGTGTTTGTTGT+TGG | - | chr5.3:61854359-61854378 | None:intergenic | 45.0% |
| !! | GGTGGACTGTAAACTGGTAT+GGG | - | chr5.3:61855703-61855722 | None:intergenic | 45.0% |
| !! | TACGACTTGCTAGCCATGTT+TGG | + | chr5.3:61856396-61856415 | MS.gene009578:CDS | 45.0% |
| !! | TGGTGGACTGTAAACTGGTA+TGG | - | chr5.3:61855704-61855723 | None:intergenic | 45.0% |
| AACTTTGCGGCAAATGGACG+AGG | - | chr5.3:61856377-61856396 | None:intergenic | 50.0% | |
| ACCAGGTAGTGCACAACTCT+TGG | + | chr5.3:61857196-61857215 | MS.gene009578:intron | 50.0% | |
| AGAAGCTCATGCCTTGATGG+AGG | + | chr5.3:61856633-61856652 | MS.gene009578:CDS | 50.0% | |
| AGCAAGATCCAACTCAGCAC+TGG | - | chr5.3:61855567-61855586 | None:intergenic | 50.0% | |
| AGGCTGGACTTTATTGGACG+AGG | + | chr5.3:61855514-61855533 | MS.gene009578:intron | 50.0% | |
| ATACCAGATAGGTCCTCTCC+AGG | - | chr5.3:61857021-61857040 | None:intergenic | 50.0% | |
| CAGGTCGTGAGACACTTGAA+TGG | + | chr5.3:61855409-61855428 | MS.gene009578:intron | 50.0% | |
| CGAGAAGGTCAATGGATAGG+TGG | + | chr5.3:61858000-61858019 | MS.gene009578:CDS | 50.0% | |
| GCAGAGAGAATGACCAAGAG+AGG | - | chr5.3:61854396-61854415 | None:intergenic | 50.0% | |
| GCTGGTTGTTTATGCCCTGT+TGG | + | chr5.3:61856973-61856992 | MS.gene009578:CDS | 50.0% | |
| GGTCGTGAGACACTTGAATG+GGG | + | chr5.3:61855411-61855430 | MS.gene009578:intron | 50.0% | |
| GTATTCTTGGAGCTCCTCCT+AGG | - | chr5.3:61855129-61855148 | None:intergenic | 50.0% | |
| GTGCTGAGGCTGGACTTTAT+TGG | + | chr5.3:61855508-61855527 | MS.gene009578:intron | 50.0% | |
| GTGGCTCGCTATATCTTGAC+TGG | - | chr5.3:61855597-61855616 | None:intergenic | 50.0% | |
| TAGCTGTCTTATGGAGGCTC+GGG | + | chr5.3:61858027-61858046 | MS.gene009578:CDS | 50.0% | |
| TCAACTTCACGTGCCCTGTA+CGG | - | chr5.3:61855298-61855317 | None:intergenic | 50.0% | |
| TCCAAGAGTTGTGCACTACC+TGG | - | chr5.3:61857200-61857219 | None:intergenic | 50.0% | |
| TCTACCTTTCCTCACTCTGG+CGG | + | chr5.3:61854419-61854438 | MS.gene009578:CDS | 50.0% | |
| TGAAAGCCAAGCTAGTGCTG+AGG | + | chr5.3:61855494-61855513 | MS.gene009578:intron | 50.0% | |
| TTACAACAGTGGAGCTGCCT+AGG | + | chr5.3:61855109-61855128 | MS.gene009578:intron | 50.0% | |
| ! | ACGAAGGTTTTCCGTTGGGA+TGG | - | chr5.3:61857644-61857663 | None:intergenic | 50.0% |
| ! | CACTCAAACCAGTGCTGAGT+TGG | + | chr5.3:61855556-61855575 | MS.gene009578:intron | 50.0% |
| ! | CGATCTGGTTCCTGCAGTTA+AGG | + | chr5.3:61854938-61854957 | MS.gene009578:intron | 50.0% |
| ! | CGCAAACGAAGGTTTTCCGT+TGG | - | chr5.3:61857649-61857668 | None:intergenic | 50.0% |
| ! | CTGATTTGCACAGCCCAGTT+GGG | + | chr5.3:61855444-61855463 | MS.gene009578:intron | 50.0% |
| ! | GCTCATGCCTTTCTGGTACT+AGG | + | chr5.3:61856723-61856742 | MS.gene009578:intron | 50.0% |
| ! | TGACTTGATGGGTCTCTCGT+TGG | + | chr5.3:61855226-61855245 | MS.gene009578:intron | 50.0% |
| ! | TGATTTGCACAGCCCAGTTG+GGG | + | chr5.3:61855445-61855464 | MS.gene009578:intron | 50.0% |
| ! | TTGATGGGTCTCTCGTTGGT+TGG | + | chr5.3:61855230-61855249 | MS.gene009578:intron | 50.0% |
| !! | ACGTTTGGTGGACTGTGGTT+TGG | - | chr5.3:61855638-61855657 | None:intergenic | 50.0% |
| CTACCTTTCCTCACTCTGGC+GGG | + | chr5.3:61854420-61854439 | MS.gene009578:CDS | 55.0% | |
| GATTTGCACAGCCCAGTTGG+GGG | + | chr5.3:61855446-61855465 | MS.gene009578:intron | 55.0% | |
| GCTTACGTAACTGTGCTGCG+TGG | + | chr5.3:61855386-61855405 | MS.gene009578:intron | 55.0% | |
| TGCGGCAAATGGACGAGGTA+AGG | - | chr5.3:61856372-61856391 | None:intergenic | 55.0% | |
| TTACCCGCCAGAGTGAGGAA+AGG | - | chr5.3:61854426-61854445 | None:intergenic | 55.0% | |
| TTGGGTTTGGGCTGCTGCAA+CGG | + | chr5.3:61856693-61856712 | MS.gene009578:CDS | 55.0% | |
| ! | CTCTCGTTGGTTGGCTGGTA+CGG | + | chr5.3:61855239-61855258 | MS.gene009578:intron | 55.0% |
| ! | GCAGCTAGAAGCGCAAACGA+AGG | - | chr5.3:61857660-61857679 | None:intergenic | 55.0% |
| !! | GCTGATTTGCACAGCCCAGT+TGG | + | chr5.3:61855443-61855462 | MS.gene009578:intron | 55.0% |
| !! | GCTTGACGTTTGGTGGACTG+TGG | - | chr5.3:61855643-61855662 | None:intergenic | 55.0% |
| ACGTAACTGTGCTGCGTGGC+AGG | + | chr5.3:61855390-61855409 | MS.gene009578:intron | 60.0% | |
| AGGTTGCAGCTCGTCCGTAC+AGG | + | chr5.3:61855281-61855300 | MS.gene009578:intron | 60.0% | |
| CAACAGTGGAGCTGCCTAGG+AGG | + | chr5.3:61855112-61855131 | MS.gene009578:intron | 60.0% | |
| GCACCTGGAGAGGACCTATC+TGG | + | chr5.3:61857015-61857034 | MS.gene009578:CDS | 60.0% | |
| GGTTGCAGCTCGTCCGTACA+GGG | + | chr5.3:61855282-61855301 | MS.gene009578:intron | 60.0% | |
| GTCCAGCCTCAGCACTAGCT+TGG | - | chr5.3:61855503-61855522 | None:intergenic | 60.0% | |
| TGGAGTTACCCGCCAGAGTG+AGG | - | chr5.3:61854431-61854450 | None:intergenic | 60.0% | |
| ! | AGCCAAGCTAGTGCTGAGGC+TGG | + | chr5.3:61855498-61855517 | MS.gene009578:intron | 60.0% |
| ! | TGGGTCTCTCGTTGGTTGGC+TGG | + | chr5.3:61855234-61855253 | MS.gene009578:intron | 60.0% |
| ACGCCAAGCGCGCCCCCAAC+TGG | - | chr5.3:61855461-61855480 | None:intergenic | 75.0% | |
| CGCCAAGCGCGCCCCCAACT+GGG | - | chr5.3:61855460-61855479 | None:intergenic | 75.0% | |
| ! | AGCCCAGTTGGGGGCGCGCT+TGG | + | chr5.3:61855455-61855474 | MS.gene009578:intron | 75.0% |
| ! | AGTTGGGGGCGCGCTTGGCG+TGG | + | chr5.3:61855460-61855479 | MS.gene009578:intron | 75.0% |
| !! | GGGGGCGCGCTTGGCGTGGT+TGG | + | chr5.3:61855464-61855483 | MS.gene009578:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 61854287 | 61858115 | 61854287 | ID=MS.gene009578 |
| chr5.3 | mRNA | 61854287 | 61858115 | 61854287 | ID=MS.gene009578.t1;Parent=MS.gene009578 |
| chr5.3 | exon | 61854287 | 61854441 | 61854287 | ID=MS.gene009578.t1.exon1;Parent=MS.gene009578.t1 |
| chr5.3 | CDS | 61854287 | 61854441 | 61854287 | ID=cds.MS.gene009578.t1;Parent=MS.gene009578.t1 |
| chr5.3 | exon | 61854617 | 61854767 | 61854617 | ID=MS.gene009578.t1.exon2;Parent=MS.gene009578.t1 |
| chr5.3 | CDS | 61854617 | 61854767 | 61854617 | ID=cds.MS.gene009578.t1;Parent=MS.gene009578.t1 |
| chr5.3 | exon | 61856312 | 61856443 | 61856312 | ID=MS.gene009578.t1.exon3;Parent=MS.gene009578.t1 |
| chr5.3 | CDS | 61856312 | 61856443 | 61856312 | ID=cds.MS.gene009578.t1;Parent=MS.gene009578.t1 |
| chr5.3 | exon | 61856574 | 61856714 | 61856574 | ID=MS.gene009578.t1.exon4;Parent=MS.gene009578.t1 |
| chr5.3 | CDS | 61856574 | 61856714 | 61856574 | ID=cds.MS.gene009578.t1;Parent=MS.gene009578.t1 |
| chr5.3 | exon | 61856937 | 61857200 | 61856937 | ID=MS.gene009578.t1.exon5;Parent=MS.gene009578.t1 |
| chr5.3 | CDS | 61856937 | 61857200 | 61856937 | ID=cds.MS.gene009578.t1;Parent=MS.gene009578.t1 |
| chr5.3 | exon | 61857492 | 61858115 | 61857492 | ID=MS.gene009578.t1.exon6;Parent=MS.gene009578.t1 |
| chr5.3 | CDS | 61857492 | 61858115 | 61857492 | ID=cds.MS.gene009578.t1;Parent=MS.gene009578.t1 |
| Gene Sequence |
| Protein sequence |
