Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene009612.t1 | GAU32889.1 | 44.2 | 539 | 132 | 3 | 113 | 482 | 20 | 558 | 1.10E-119 | 440.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene009612.t1 | Q9SZL8 | 29.6 | 216 | 145 | 5 | 144 | 353 | 69 | 283 | 4.1e-19 | 97.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene009612.t1 | A0A2Z6NML7 | 44.2 | 539 | 132 | 3 | 113 | 482 | 20 | 558 | 7.7e-120 | 440.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene009612.t1 | TF | FAR1 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene009612.t1 | MTR_1g070355 | 48.485 | 264 | 126 | 3 | 88 | 341 | 4 | 267 | 1.73e-75 | 250 |
| MS.gene009612.t1 | MTR_5g076070 | 36.170 | 188 | 120 | 0 | 153 | 340 | 58 | 245 | 3.29e-39 | 145 |
| MS.gene009612.t1 | MTR_6g022080 | 35.326 | 184 | 119 | 0 | 129 | 312 | 66 | 249 | 3.44e-38 | 141 |
| MS.gene009612.t1 | MTR_2g101460 | 48.592 | 142 | 69 | 1 | 112 | 253 | 23 | 160 | 9.28e-34 | 128 |
| MS.gene009612.t1 | MTR_2g101460 | 48.592 | 142 | 69 | 1 | 112 | 253 | 13 | 150 | 1.45e-33 | 127 |
| MS.gene009612.t1 | MTR_0060s0090 | 48.921 | 139 | 51 | 2 | 97 | 235 | 25 | 143 | 1.96e-33 | 125 |
| MS.gene009612.t1 | MTR_6g463250 | 48.507 | 134 | 48 | 2 | 107 | 234 | 41 | 159 | 1.67e-32 | 123 |
| MS.gene009612.t1 | MTR_7g446520 | 29.699 | 266 | 157 | 6 | 80 | 338 | 20 | 262 | 5.21e-27 | 112 |
| MS.gene009612.t1 | MTR_3g448650 | 46.429 | 112 | 56 | 1 | 112 | 223 | 50 | 157 | 2.71e-26 | 106 |
| MS.gene009612.t1 | MTR_1g052260 | 44.231 | 104 | 58 | 0 | 127 | 230 | 55 | 158 | 6.60e-25 | 101 |
| MS.gene009612.t1 | MTR_4g050510 | 38.583 | 127 | 64 | 1 | 159 | 285 | 89 | 201 | 4.06e-23 | 97.8 |
| MS.gene009612.t1 | MTR_6g053140 | 34.969 | 163 | 90 | 4 | 88 | 241 | 34 | 189 | 6.16e-22 | 94.7 |
| MS.gene009612.t1 | MTR_7g028855 | 29.148 | 223 | 150 | 5 | 75 | 291 | 43 | 263 | 1.43e-19 | 92.0 |
| MS.gene009612.t1 | MTR_8g066350 | 33.858 | 127 | 66 | 1 | 127 | 253 | 58 | 166 | 1.23e-17 | 81.3 |
| MS.gene009612.t1 | MTR_0402s0040 | 31.548 | 168 | 107 | 5 | 152 | 317 | 32 | 193 | 3.78e-16 | 81.6 |
| MS.gene009612.t1 | MTR_0604s0020 | 43.243 | 74 | 42 | 0 | 159 | 232 | 3 | 76 | 8.05e-16 | 72.8 |
| MS.gene009612.t1 | MTR_7g446480 | 36.207 | 116 | 72 | 1 | 225 | 338 | 140 | 255 | 1.63e-14 | 75.1 |
| MS.gene009612.t1 | MTR_7g446510 | 36.207 | 116 | 72 | 1 | 225 | 338 | 155 | 270 | 4.54e-13 | 70.9 |
| MS.gene009612.t1 | MTR_6g051425 | 28.061 | 196 | 129 | 6 | 158 | 345 | 27 | 218 | 5.71e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene009612.t1 | AT4G38180 | 29.796 | 245 | 158 | 8 | 152 | 389 | 77 | 314 | 1.64e-17 | 87.0 |
| MS.gene009612.t1 | AT5G28530 | 33.750 | 160 | 102 | 3 | 154 | 310 | 61 | 219 | 1.97e-16 | 83.2 |
| MS.gene009612.t1 | AT5G28530 | 33.750 | 160 | 102 | 3 | 154 | 310 | 61 | 219 | 2.02e-16 | 83.2 |
| MS.gene009612.t1 | AT5G28530 | 33.750 | 160 | 102 | 3 | 154 | 310 | 61 | 219 | 2.20e-16 | 83.2 |
| MS.gene009612.t1 | AT5G28530 | 33.750 | 160 | 102 | 3 | 154 | 310 | 61 | 219 | 2.25e-16 | 83.2 |
| MS.gene009612.t1 | AT5G28530 | 33.750 | 160 | 102 | 3 | 154 | 310 | 61 | 219 | 2.25e-16 | 83.2 |
| MS.gene009612.t1 | AT1G10240 | 28.516 | 256 | 161 | 9 | 154 | 390 | 54 | 306 | 1.94e-15 | 80.1 |
| MS.gene009612.t1 | AT1G10240 | 28.516 | 256 | 161 | 9 | 154 | 390 | 54 | 306 | 1.94e-15 | 80.1 |
Find 118 sgRNAs with CRISPR-Local
Find 224 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCACACCTGGTATCATTTC+TGG | 0.155992 | 5.3:+61130323 | None:intergenic |
| ACACAAATGGTTCACAATAT+TGG | 0.219824 | 5.3:-61128838 | MS.gene009612:CDS |
| CACAAATGGTTCACAATATT+GGG | 0.257023 | 5.3:-61128837 | MS.gene009612:CDS |
| TCCCTTAGCTTTGCTTGGTT+TGG | 0.257469 | 5.3:+61131749 | None:intergenic |
| TTGTTGATTCAGGGAGTAGA+AGG | 0.286138 | 5.3:-61130914 | MS.gene009612:intron |
| ATTTCAAATGTTCGTGTCTT+AGG | 0.296750 | 5.3:-61128991 | MS.gene009612:CDS |
| GGGAATGCTATAGTCATAAA+TGG | 0.304640 | 5.3:-61130594 | MS.gene009612:CDS |
| CTTTGCTTGGTTTGGATCTC+GGG | 0.316291 | 5.3:+61131757 | None:intergenic |
| TCACCGTTGTTGACTCCTTT+AGG | 0.330711 | 5.3:+61128491 | None:intergenic |
| GTATGTGCAACATACATTAA+AGG | 0.333195 | 5.3:+61129955 | None:intergenic |
| CCTGTGTAAAACTAGATTCT+TGG | 0.335728 | 5.3:+61128898 | None:intergenic |
| ATTGCACCATACGTTTGATA+TGG | 0.351243 | 5.3:+61130117 | None:intergenic |
| GCTTTGCTTGGTTTGGATCT+CGG | 0.353114 | 5.3:+61131756 | None:intergenic |
| CCAAGTTCTGAGGGACCGTT+TGG | 0.359223 | 5.3:-61130433 | MS.gene009612:CDS |
| AAGGGACTCTTTGTGTTGTT+AGG | 0.370328 | 5.3:-61131732 | MS.gene009612:intron |
| CAATATTAACATCGAGGAAA+TGG | 0.372866 | 5.3:-61130712 | MS.gene009612:CDS |
| CCAAACGGTCCCTCAGAACT+TGG | 0.376804 | 5.3:+61130433 | None:intergenic |
| TTCAGACGAAGGAGATAATA+TGG | 0.381516 | 5.3:-61130682 | MS.gene009612:CDS |
| CTTCCACCAGGCGTAGCAAT+TGG | 0.387040 | 5.3:+61128572 | None:intergenic |
| GTTTCAAAGTACTGTGGAAA+TGG | 0.394957 | 5.3:-61129052 | MS.gene009612:CDS |
| CCACACCTGGTATCATTTCT+GGG | 0.408982 | 5.3:+61130324 | None:intergenic |
| AGCGATTCATCCGAGTCTAA+TGG | 0.410491 | 5.3:-61130615 | MS.gene009612:CDS |
| AGTCGTCGACGAAAGTTTAC+TGG | 0.423532 | 5.3:-61128633 | MS.gene009612:CDS |
| TCATGGTATGCAAGGGTAAA+CGG | 0.428944 | 5.3:-61130474 | MS.gene009612:CDS |
| TATGTGCAACATACATTAAA+GGG | 0.429560 | 5.3:+61129956 | None:intergenic |
| AAGGATTTGTATAATCAATC+AGG | 0.433589 | 5.3:-61130051 | MS.gene009612:CDS |
| GAGATAATATGGATGACAAT+GGG | 0.436783 | 5.3:-61130671 | MS.gene009612:CDS |
| GGGATTCTCAAATTGCTTCA+AGG | 0.437802 | 5.3:-61128817 | MS.gene009612:CDS |
| CTGTGTAAAACTAGATTCTT+GGG | 0.438174 | 5.3:+61128899 | None:intergenic |
| CCTACTTGTGTGAGGACTAA+AGG | 0.444636 | 5.3:-61128608 | MS.gene009612:CDS |
| CTACTTGTGTGAGGACTAAA+GGG | 0.449197 | 5.3:-61128607 | MS.gene009612:CDS |
| GCGATTCATCCGAGTCTAAT+GGG | 0.449731 | 5.3:-61130614 | MS.gene009612:CDS |
| TGTCTTAGGATGGAGTCGTT+TGG | 0.452899 | 5.3:-61128977 | MS.gene009612:CDS |
| CACGAACATTTGAAATCTAC+AGG | 0.467229 | 5.3:+61128998 | None:intergenic |
| AAGAGTCCCTTAGCTTTGCT+TGG | 0.468067 | 5.3:+61131744 | None:intergenic |
| TGTAGTCAGTGTGGTGTGAT+AGG | 0.474905 | 5.3:-61128533 | MS.gene009612:CDS |
| TATTCAGTTGTCGAAGGATG+TGG | 0.485194 | 5.3:-61128783 | MS.gene009612:CDS |
| CCTTTAGTCCTCACACAAGT+AGG | 0.488782 | 5.3:+61128608 | None:intergenic |
| TTCTCGCTTCCGCCTCTCCA+AGG | 0.489867 | 5.3:+61130347 | None:intergenic |
| GGTGCAATGGCTAATTCATC+AGG | 0.491612 | 5.3:-61130102 | MS.gene009612:CDS |
| TCAATCTCAATCAAATCAGT+TGG | 0.493229 | 5.3:+61130165 | None:intergenic |
| TTGCATATAATTTCTACTCA+TGG | 0.494106 | 5.3:-61130491 | MS.gene009612:CDS |
| AGAGAACAGGGGATTGACCT+TGG | 0.494325 | 5.3:-61130364 | MS.gene009612:CDS |
| TGTTGATTCAGGGAGTAGAA+GGG | 0.494387 | 5.3:-61130913 | MS.gene009612:intron |
| GCTTCTGTTGTAGGTTATGG+AGG | 0.499576 | 5.3:-61130766 | MS.gene009612:intron |
| CTAAATTCATCAGATATGAA+TGG | 0.499723 | 5.3:-61130878 | MS.gene009612:CDS |
| TTGCTACGCCTGGTGGAAGT+AGG | 0.503186 | 5.3:-61128568 | MS.gene009612:CDS |
| ATCCAAACCAAGCAAAGCTA+AGG | 0.506402 | 5.3:-61131751 | MS.gene009612:CDS |
| CAAATTGCTTCAAGGTATGC+GGG | 0.516691 | 5.3:-61128809 | MS.gene009612:CDS |
| CTGTTGGATGGTTTGCTATG+TGG | 0.521362 | 5.3:-61130216 | MS.gene009612:CDS |
| CAAATGTTCGTGTCTTAGGA+TGG | 0.523067 | 5.3:-61128987 | MS.gene009612:CDS |
| AATAAACGATCATGTCCTAA+AGG | 0.523227 | 5.3:-61128506 | MS.gene009612:CDS |
| ATTAATGAAGATGATGAAGA+AGG | 0.525000 | 5.3:-61128434 | MS.gene009612:CDS |
| GTCGAAGGATGTGGCTGAGA+GGG | 0.529678 | 5.3:-61128774 | MS.gene009612:CDS |
| TAGACATTGTTTCAAAGCGT+TGG | 0.530743 | 5.3:-61130275 | MS.gene009612:CDS |
| ATTTCTACTCATGGTATGCA+AGG | 0.531446 | 5.3:-61130482 | MS.gene009612:CDS |
| CATAACCACGAGCTGTTGGA+TGG | 0.541920 | 5.3:-61130228 | MS.gene009612:CDS |
| CAAGTTCTGAGGGACCGTTT+GGG | 0.542763 | 5.3:-61130432 | MS.gene009612:CDS |
| TGCGCATAACCACGAGCTGT+TGG | 0.543217 | 5.3:-61130232 | MS.gene009612:CDS |
| GGTGTTAGCTTTCTATGTGC+CGG | 0.543539 | 5.3:+61130186 | None:intergenic |
| ACTAATCCAATTGCTACGCC+TGG | 0.544424 | 5.3:-61128578 | MS.gene009612:CDS |
| GTTGGTATTGATGCTAGCAC+TGG | 0.544748 | 5.3:-61128668 | MS.gene009612:CDS |
| GTTGCAGAACATTACCCAAA+CGG | 0.544835 | 5.3:+61130418 | None:intergenic |
| AAGAATAAAACAACAACTGT+TGG | 0.546824 | 5.3:-61128686 | MS.gene009612:CDS |
| GTTATGCGCAAATTCAAATA+CGG | 0.547080 | 5.3:+61130245 | None:intergenic |
| GTGAACTGTCACATGGATGA+AGG | 0.551488 | 5.3:+61131239 | None:intergenic |
| ATTGAAAAGTATAAGAATGT+TGG | 0.559478 | 5.3:-61130147 | MS.gene009612:CDS |
| CCGTGTATATATTGAAAATG+TGG | 0.564938 | 5.3:-61131217 | MS.gene009612:intron |
| TGAAATTCAAGAGATGTCCA+TGG | 0.566346 | 5.3:-61129089 | MS.gene009612:CDS |
| GTTCGAGCAAGATACACAAA+TGG | 0.566756 | 5.3:-61128851 | MS.gene009612:CDS |
| GGAGATAATATGGATGACAA+TGG | 0.571879 | 5.3:-61130672 | MS.gene009612:CDS |
| TCTGTTGTAGGTTATGGAGG+AGG | 0.573234 | 5.3:-61130763 | MS.gene009612:intron |
| TTCGGAAGACCCAAGTTCTG+AGG | 0.573488 | 5.3:-61130443 | MS.gene009612:CDS |
| TCAAATTGCTTCAAGGTATG+CGG | 0.574162 | 5.3:-61128810 | MS.gene009612:CDS |
| TTTCTGTAGATGTAGTTGAA+AGG | 0.575027 | 5.3:-61130536 | MS.gene009612:CDS |
| AATCCAATTGCTACGCCTGG+TGG | 0.577075 | 5.3:-61128575 | MS.gene009612:CDS |
| ATATCAAACGTATGGTGCAA+TGG | 0.580935 | 5.3:-61130115 | MS.gene009612:CDS |
| CTTTAGTCCTCACACAAGTA+GGG | 0.582163 | 5.3:+61128609 | None:intergenic |
| CCACACTGACTACATGATTG+AGG | 0.582317 | 5.3:+61128542 | None:intergenic |
| GAGAACCCAGAAATGATACC+AGG | 0.586155 | 5.3:-61130329 | MS.gene009612:CDS |
| GTAAGACCATATCAAACGTA+TGG | 0.586746 | 5.3:-61130123 | MS.gene009612:CDS |
| AACTTTGTAGATAGAACCCA+TGG | 0.589394 | 5.3:+61129072 | None:intergenic |
| GGGGATTGACCTTGGAGAGG+CGG | 0.591821 | 5.3:-61130356 | MS.gene009612:CDS |
| ATCAGATATGAATGGATGCA+TGG | 0.592737 | 5.3:-61130870 | MS.gene009612:CDS |
| GCTATAGTCATAAATGGCAT+CGG | 0.596967 | 5.3:-61130588 | MS.gene009612:CDS |
| GTAAAACTAGATTCTTGGGA+AGG | 0.598080 | 5.3:+61128903 | None:intergenic |
| GGGAATTATTCAGTTGTCGA+AGG | 0.603195 | 5.3:-61128789 | MS.gene009612:CDS |
| GAAATTCAAGAGATGTCCAT+GGG | 0.603913 | 5.3:-61129088 | MS.gene009612:CDS |
| GAATGGATGCATGGATGATG+AGG | 0.606403 | 5.3:-61130861 | MS.gene009612:CDS |
| TTGGTATTGATGCTAGCACT+GGG | 0.610032 | 5.3:-61128667 | MS.gene009612:CDS |
| TCGGAAGACCCAAGTTCTGA+GGG | 0.617413 | 5.3:-61130442 | MS.gene009612:CDS |
| TTAGTTTCATCTGACTCTTG+CGG | 0.617850 | 5.3:-61130015 | MS.gene009612:CDS |
| ACAGCAATAATATGATCGCA+AGG | 0.619104 | 5.3:+61128950 | None:intergenic |
| CAAACGGTCCCTCAGAACTT+GGG | 0.622569 | 5.3:+61130434 | None:intergenic |
| TCCAAACCAAGCAAAGCTAA+GGG | 0.624671 | 5.3:-61131750 | MS.gene009612:CDS |
| GCAATGGCTAATTCATCAGG+TGG | 0.625760 | 5.3:-61130099 | MS.gene009612:CDS |
| TACTGGACCCTACTTGTGTG+AGG | 0.626363 | 5.3:-61128616 | MS.gene009612:CDS |
| TTTCTACTCATGGTATGCAA+GGG | 0.627306 | 5.3:-61130481 | MS.gene009612:CDS |
| GCTTTGAAACAATGTCTATG+TGG | 0.628276 | 5.3:+61130280 | None:intergenic |
| ATGGACGAAGCTTCAGACGA+AGG | 0.631163 | 5.3:-61130693 | MS.gene009612:CDS |
| TACAAAGTTTCAAAGTACTG+TGG | 0.634037 | 5.3:-61129058 | MS.gene009612:CDS |
| ACTGTGGAAATGGAAGTGTC+TGG | 0.638067 | 5.3:-61129042 | MS.gene009612:CDS |
| TATAGCATTCCCATTAGACT+CGG | 0.641750 | 5.3:+61130605 | None:intergenic |
| AATGGGGCTAATGAGTGTGA+TGG | 0.645283 | 5.3:-61130654 | MS.gene009612:CDS |
| CCCAGAAATGATACCAGGTG+TGG | 0.648094 | 5.3:-61130324 | MS.gene009612:CDS |
| TGTCGAAGGATGTGGCTGAG+AGG | 0.652941 | 5.3:-61128775 | MS.gene009612:CDS |
| ATAATCAATCAGGAAGACAA+AGG | 0.657924 | 5.3:-61130041 | MS.gene009612:CDS |
| GCAAACCATCCAACAGCTCG+TGG | 0.662133 | 5.3:+61130223 | None:intergenic |
| ACAGGGGATTGACCTTGGAG+AGG | 0.670051 | 5.3:-61130359 | MS.gene009612:CDS |
| TGTGTGAGGACTAAAGGGTG+TGG | 0.670824 | 5.3:-61128602 | MS.gene009612:CDS |
| TGAGGACGCCTACTTCCACC+AGG | 0.673688 | 5.3:+61128560 | None:intergenic |
| AGATAATATGGATGACAATG+GGG | 0.688595 | 5.3:-61130670 | MS.gene009612:CDS |
| CCTCAATCATGTAGTCAGTG+TGG | 0.690892 | 5.3:-61128542 | MS.gene009612:CDS |
| ATACACGGTGAACTGTCACA+TGG | 0.692606 | 5.3:+61131232 | None:intergenic |
| CACTAAGAAAATCTACAATG+CGG | 0.712293 | 5.3:+61128726 | None:intergenic |
| TAATGACAATATTAACATCG+AGG | 0.732342 | 5.3:-61130718 | MS.gene009612:CDS |
| TGTCCTAAAGGAGTCAACAA+CGG | 0.735045 | 5.3:-61128494 | MS.gene009612:CDS |
| TGGTATTGATGCTAGCACTG+GGG | 0.762460 | 5.3:-61128666 | MS.gene009612:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATAAAAATAAAACTGAATTT+TGG | + | chr5.3:61128528-61128547 | None:intergenic | 10.0% |
| !!! | TTACAGATTTTTTTTTTAAA+TGG | + | chr5.3:61128807-61128826 | None:intergenic | 10.0% |
| !! | AATAAATTGATGCTAATTAT+TGG | - | chr5.3:61128921-61128940 | MS.gene009612:CDS | 15.0% |
| !!! | TATCTCTTTTTAATTAATGT+GGG | + | chr5.3:61129067-61129086 | None:intergenic | 15.0% |
| !!! | TTATCTCTTTTTAATTAATG+TGG | + | chr5.3:61129068-61129087 | None:intergenic | 15.0% |
| !! | AAATGAATGAAAAAGGTTAA+TGG | + | chr5.3:61129118-61129137 | None:intergenic | 20.0% |
| !! | AATGAATGAAAAAGGTTAAT+GGG | + | chr5.3:61129117-61129136 | None:intergenic | 20.0% |
| !! | GTAAGTAAAAAGTGATTATT+AGG | - | chr5.3:61129392-61129411 | MS.gene009612:intron | 20.0% |
| !!! | ATTGAAAAGTATAAGAATGT+TGG | - | chr5.3:61130081-61130100 | MS.gene009612:CDS | 20.0% |
| !!! | ATTGTATTTGTTTTTCCTAT+AGG | + | chr5.3:61130397-61130416 | None:intergenic | 20.0% |
| !!! | CGTATGAATTATGAAATTTT+TGG | - | chr5.3:61130348-61130367 | MS.gene009612:CDS | 20.0% |
| !!! | TTTTGGAAATATACTCTTTA+TGG | + | chr5.3:61130601-61130620 | None:intergenic | 20.0% |
| !!! | TTTTTTAGAATCAATAAGCT+GGG | + | chr5.3:61128901-61128920 | None:intergenic | 20.0% |
| !!! | TTTTTTTAAATGGTGAGAAT+TGG | + | chr5.3:61128797-61128816 | None:intergenic | 20.0% |
| !!! | TTTTTTTAGAATCAATAAGC+TGG | + | chr5.3:61128902-61128921 | None:intergenic | 20.0% |
| ! | AAGAATAAAACAACAACTGT+TGG | - | chr5.3:61131542-61131561 | MS.gene009612:intron | 25.0% |
| ! | AAGGATTTGTATAATCAATC+AGG | - | chr5.3:61130177-61130196 | MS.gene009612:CDS | 25.0% |
| ! | ACCATTATATTTGACATTGA+TGG | - | chr5.3:61128640-61128659 | MS.gene009612:CDS | 25.0% |
| ! | AGTAGGAAAATGAATGAAAA+AGG | + | chr5.3:61129125-61129144 | None:intergenic | 25.0% |
| ! | ATATCTTAAAAGATGCATGT+TGG | - | chr5.3:61130695-61130714 | MS.gene009612:CDS | 25.0% |
| ! | ATTAATGAAGATGATGAAGA+AGG | - | chr5.3:61131794-61131813 | MS.gene009612:CDS | 25.0% |
| ! | CTAAATTCATCAGATATGAA+TGG | - | chr5.3:61129350-61129369 | MS.gene009612:intron | 25.0% |
| ! | GAATAAGTTTGAAGAACTAT+GGG | - | chr5.3:61130731-61130750 | MS.gene009612:CDS | 25.0% |
| ! | GTATGCAAAAAAAAGAATGT+GGG | - | chr5.3:61130806-61130825 | MS.gene009612:intron | 25.0% |
| ! | TAAAATTATGCTTCTGTTGT+AGG | - | chr5.3:61129453-61129472 | MS.gene009612:intron | 25.0% |
| ! | TAATGACAATATTAACATCG+AGG | - | chr5.3:61129510-61129529 | MS.gene009612:intron | 25.0% |
| ! | TAATGTTGAAAATGTGTCTA+AGG | + | chr5.3:61129209-61129228 | None:intergenic | 25.0% |
| ! | TATCTTAAAAGATGCATGTT+GGG | - | chr5.3:61130696-61130715 | MS.gene009612:CDS | 25.0% |
| ! | TATGTGCAACATACATTAAA+GGG | + | chr5.3:61130275-61130294 | None:intergenic | 25.0% |
| ! | TCATCTATAATATCATCAGT+AGG | + | chr5.3:61129142-61129161 | None:intergenic | 25.0% |
| ! | TGAATAAGTTTGAAGAACTA+TGG | - | chr5.3:61130730-61130749 | MS.gene009612:CDS | 25.0% |
| ! | TGTATGCAAAAAAAAGAATG+TGG | - | chr5.3:61130805-61130824 | MS.gene009612:intron | 25.0% |
| ! | TTGCATATAATTTCTACTCA+TGG | - | chr5.3:61129737-61129756 | MS.gene009612:intron | 25.0% |
| !! | CCACATTTTCAATATATACA+CGG | + | chr5.3:61129014-61129033 | None:intergenic | 25.0% |
| !!! | AACAAACTTTTGTTTGTTCA+CGG | - | chr5.3:61129830-61129849 | MS.gene009612:intron | 25.0% |
| !!! | AAGATTTTTTCAGAGCATTA+CGG | + | chr5.3:61131103-61131122 | None:intergenic | 25.0% |
| !!! | ATCATATGTATTGTTGATTC+AGG | - | chr5.3:61129304-61129323 | MS.gene009612:intron | 25.0% |
| !!! | TCATATGTATTGTTGATTCA+GGG | - | chr5.3:61129305-61129324 | MS.gene009612:intron | 25.0% |
| !!! | TGAAATTTTTGGTGATGTAT+TGG | - | chr5.3:61130359-61130378 | MS.gene009612:CDS | 25.0% |
| AACAGAAGAATTCAGTTTGA+AGG | + | chr5.3:61128565-61128584 | None:intergenic | 30.0% | |
| AATAAACGATCATGTCCTAA+AGG | - | chr5.3:61131722-61131741 | MS.gene009612:intron | 30.0% | |
| ACACAAATGGTTCACAATAT+TGG | - | chr5.3:61131390-61131409 | MS.gene009612:intron | 30.0% | |
| AGATAATATGGATGACAATG+GGG | - | chr5.3:61129558-61129577 | MS.gene009612:intron | 30.0% | |
| ATAATCAATCAGGAAGACAA+AGG | - | chr5.3:61130187-61130206 | MS.gene009612:CDS | 30.0% | |
| ATACTGTAGACAAAGATAAG+AGG | - | chr5.3:61130292-61130311 | MS.gene009612:CDS | 30.0% | |
| ATTTCAAATGTTCGTGTCTT+AGG | - | chr5.3:61131237-61131256 | MS.gene009612:CDS | 30.0% | |
| CAATATTAACATCGAGGAAA+TGG | - | chr5.3:61129516-61129535 | MS.gene009612:intron | 30.0% | |
| CACAAATGGTTCACAATATT+GGG | - | chr5.3:61131391-61131410 | MS.gene009612:intron | 30.0% | |
| CACTAAGAAAATCTACAATG+CGG | + | chr5.3:61131505-61131524 | None:intergenic | 30.0% | |
| CCGTGTATATATTGAAAATG+TGG | - | chr5.3:61129011-61129030 | MS.gene009612:CDS | 30.0% | |
| CTCGAAATCGAAAATATGTA+AGG | + | chr5.3:61130968-61130987 | None:intergenic | 30.0% | |
| CTGTGTAAAACTAGATTCTT+GGG | + | chr5.3:61131332-61131351 | None:intergenic | 30.0% | |
| GAAGAGATGGTTGAAAAATT+TGG | - | chr5.3:61130753-61130772 | MS.gene009612:CDS | 30.0% | |
| GAGATAATATGGATGACAAT+GGG | - | chr5.3:61129557-61129576 | MS.gene009612:intron | 30.0% | |
| GCCATCAATGTCAAATATAA+TGG | + | chr5.3:61128644-61128663 | None:intergenic | 30.0% | |
| GTATGTGCAACATACATTAA+AGG | + | chr5.3:61130276-61130295 | None:intergenic | 30.0% | |
| GTTATGCGCAAATTCAAATA+CGG | + | chr5.3:61129986-61130005 | None:intergenic | 30.0% | |
| TCAATCTCAATCAAATCAGT+TGG | + | chr5.3:61130066-61130085 | None:intergenic | 30.0% | |
| TTGGTTATGATGATTAACAC+CGG | + | chr5.3:61130439-61130458 | None:intergenic | 30.0% | |
| TTTCTGTAGATGTAGTTGAA+AGG | - | chr5.3:61129692-61129711 | MS.gene009612:intron | 30.0% | |
| ! | ATTTTGTCCAGCAATTTCAT+AGG | - | chr5.3:61130940-61130959 | MS.gene009612:intron | 30.0% |
| ! | CATAATCTATGATGTGCTTT+TGG | + | chr5.3:61130618-61130637 | None:intergenic | 30.0% |
| !! | ACAAACTTTTGTTTGTTCAC+GGG | - | chr5.3:61129831-61129850 | MS.gene009612:intron | 30.0% |
| !! | CAAGTTAGGTTTTGTGAAAA+AGG | - | chr5.3:61130158-61130177 | MS.gene009612:CDS | 30.0% |
| !! | CATCGGTGATATTTTAAAGA+TGG | - | chr5.3:61129657-61129676 | MS.gene009612:intron | 30.0% |
| !! | TACAAAGTTTCAAAGTACTG+TGG | - | chr5.3:61131170-61131189 | MS.gene009612:intron | 30.0% |
| !!! | ATCAAAGGAGAATTTTTTGC+AGG | - | chr5.3:61130840-61130859 | MS.gene009612:intron | 30.0% |
| !!! | TATTGCTGTTTTGATGTATC+TGG | - | chr5.3:61131292-61131311 | MS.gene009612:intron | 30.0% |
| AACATCACCGTCAGTTATTA+CGG | + | chr5.3:61130565-61130584 | None:intergenic | 35.0% | |
| AACTTTGTAGATAGAACCCA+TGG | + | chr5.3:61131159-61131178 | None:intergenic | 35.0% | |
| ACACCGGAGAAAATAACAAA+CGG | + | chr5.3:61130423-61130442 | None:intergenic | 35.0% | |
| ACAGCAATAATATGATCGCA+AGG | + | chr5.3:61131281-61131300 | None:intergenic | 35.0% | |
| ACCATAGTTGGAATGATAGT+CGG | + | chr5.3:61131000-61131019 | None:intergenic | 35.0% | |
| AGAAAATCTCCCTTGTAAAC+TGG | + | chr5.3:61131073-61131092 | None:intergenic | 35.0% | |
| AGAGACATATGTTTGGTTGT+TGG | - | chr5.3:61130500-61130519 | MS.gene009612:CDS | 35.0% | |
| ATATCAAACGTATGGTGCAA+TGG | - | chr5.3:61130113-61130132 | MS.gene009612:CDS | 35.0% | |
| ATCAGATATGAATGGATGCA+TGG | - | chr5.3:61129358-61129377 | MS.gene009612:intron | 35.0% | |
| ATTGCACCATACGTTTGATA+TGG | + | chr5.3:61130114-61130133 | None:intergenic | 35.0% | |
| ATTTCTACTCATGGTATGCA+AGG | - | chr5.3:61129746-61129765 | MS.gene009612:intron | 35.0% | |
| CACATCATAGATTATGTGCT+TGG | - | chr5.3:61130622-61130641 | MS.gene009612:CDS | 35.0% | |
| CCTGTGTAAAACTAGATTCT+TGG | + | chr5.3:61131333-61131352 | None:intergenic | 35.0% | |
| CCTTTATCCGTAATAACTGA+CGG | - | chr5.3:61130555-61130574 | MS.gene009612:CDS | 35.0% | |
| GAAATTCAAGAGATGTCCAT+GGG | - | chr5.3:61131140-61131159 | MS.gene009612:intron | 35.0% | |
| GCTATAGTCATAAATGGCAT+CGG | - | chr5.3:61129640-61129659 | MS.gene009612:intron | 35.0% | |
| GGAGATAATATGGATGACAA+TGG | - | chr5.3:61129556-61129575 | MS.gene009612:intron | 35.0% | |
| GGGAATGCTATAGTCATAAA+TGG | - | chr5.3:61129634-61129653 | MS.gene009612:intron | 35.0% | |
| GTAAAACTAGATTCTTGGGA+AGG | + | chr5.3:61131328-61131347 | None:intergenic | 35.0% | |
| GTAAGACCATATCAAACGTA+TGG | - | chr5.3:61130105-61130124 | MS.gene009612:CDS | 35.0% | |
| TAGACATTGTTTCAAAGCGT+TGG | - | chr5.3:61129953-61129972 | MS.gene009612:intron | 35.0% | |
| TATAGCATTCCCATTAGACT+CGG | + | chr5.3:61129626-61129645 | None:intergenic | 35.0% | |
| TATGCTTCTGTTGTAGGTTA+TGG | - | chr5.3:61129459-61129478 | MS.gene009612:intron | 35.0% | |
| TCAAATTGCTTCAAGGTATG+CGG | - | chr5.3:61131418-61131437 | MS.gene009612:intron | 35.0% | |
| TGAAATTCAAGAGATGTCCA+TGG | - | chr5.3:61131139-61131158 | MS.gene009612:intron | 35.0% | |
| TTAGTTTCATCTGACTCTTG+CGG | - | chr5.3:61130213-61130232 | MS.gene009612:CDS | 35.0% | |
| TTCAGACGAAGGAGATAATA+TGG | - | chr5.3:61129546-61129565 | MS.gene009612:intron | 35.0% | |
| TTTCCTATAGGTTGCATCAA+AGG | + | chr5.3:61130385-61130404 | None:intergenic | 35.0% | |
| TTTCTACTCATGGTATGCAA+GGG | - | chr5.3:61129747-61129766 | MS.gene009612:intron | 35.0% | |
| ! | CACGAACATTTGAAATCTAC+AGG | + | chr5.3:61131233-61131252 | None:intergenic | 35.0% |
| ! | TCGCAAACTAGTTTGCAATA+CGG | + | chr5.3:61131027-61131046 | None:intergenic | 35.0% |
| !! | GCTTTGAAACAATGTCTATG+TGG | + | chr5.3:61129951-61129970 | None:intergenic | 35.0% |
| !! | GTTTCAAAGTACTGTGGAAA+TGG | - | chr5.3:61131176-61131195 | MS.gene009612:intron | 35.0% |
| !! | TTCTTAGTGCTGAACTTTTG+AGG | - | chr5.3:61131516-61131535 | MS.gene009612:intron | 35.0% |
| !! | TTTGCTATGTGGTCTTTTAC+CGG | - | chr5.3:61130023-61130042 | MS.gene009612:CDS | 35.0% |
| !! | TTTTCAGAGCATTACGGAAA+AGG | + | chr5.3:61131097-61131116 | None:intergenic | 35.0% |
| !!! | AGAATCTAGTTTTACACAGG+TGG | - | chr5.3:61131333-61131352 | MS.gene009612:intron | 35.0% |
| !!! | AGGTATTTACTTTTGAAGCG+AGG | - | chr5.3:61129412-61129431 | MS.gene009612:intron | 35.0% |
| !!! | CCAAGAATCTAGTTTTACAC+AGG | - | chr5.3:61131330-61131349 | MS.gene009612:intron | 35.0% |
| AAGATGCATGTTGGGTGATA+TGG | - | chr5.3:61130704-61130723 | MS.gene009612:CDS | 40.0% | |
| AGACGGAAGAGACATATGTT+TGG | - | chr5.3:61130493-61130512 | MS.gene009612:CDS | 40.0% | |
| AGGTTTAGTTACGAGAGAGA+CGG | - | chr5.3:61130476-61130495 | MS.gene009612:CDS | 40.0% | |
| ATCCAAACCAAGCAAAGCTA+AGG | - | chr5.3:61128477-61128496 | MS.gene009612:CDS | 40.0% | |
| CAAATGTTCGTGTCTTAGGA+TGG | - | chr5.3:61131241-61131260 | MS.gene009612:CDS | 40.0% | |
| CAAATTGCTTCAAGGTATGC+GGG | - | chr5.3:61131419-61131438 | MS.gene009612:intron | 40.0% | |
| CACCGGAGAAAATAACAAAC+GGG | + | chr5.3:61130422-61130441 | None:intergenic | 40.0% | |
| CCGTCAGTTATTACGGATAA+AGG | + | chr5.3:61130558-61130577 | None:intergenic | 40.0% | |
| CTACTTGTGTGAGGACTAAA+GGG | - | chr5.3:61131621-61131640 | MS.gene009612:intron | 40.0% | |
| CTTTAGTCCTCACACAAGTA+GGG | + | chr5.3:61131622-61131641 | None:intergenic | 40.0% | |
| GAGGGTTTACATAGTCACAT+AGG | - | chr5.3:61130885-61130904 | MS.gene009612:CDS | 40.0% | |
| GGAATGCATCATCGAATGTT+GGG | - | chr5.3:61130655-61130674 | MS.gene009612:CDS | 40.0% | |
| GGGAATTATTCAGTTGTCGA+AGG | - | chr5.3:61131439-61131458 | MS.gene009612:intron | 40.0% | |
| GGGATTCTCAAATTGCTTCA+AGG | - | chr5.3:61131411-61131430 | MS.gene009612:intron | 40.0% | |
| GTGTCTAAGGAGATCAAACT+AGG | + | chr5.3:61129196-61129215 | None:intergenic | 40.0% | |
| GTTCGAGCAAGATACACAAA+TGG | - | chr5.3:61131377-61131396 | MS.gene009612:intron | 40.0% | |
| GTTGCAGAACATTACCCAAA+CGG | + | chr5.3:61129813-61129832 | None:intergenic | 40.0% | |
| TATGTGCTTGGCATCTTCTA+CGG | - | chr5.3:61130634-61130653 | MS.gene009612:CDS | 40.0% | |
| TATTCAGTTGTCGAAGGATG+TGG | - | chr5.3:61131445-61131464 | MS.gene009612:intron | 40.0% | |
| TCATGGTATGCAAGGGTAAA+CGG | - | chr5.3:61129754-61129773 | MS.gene009612:intron | 40.0% | |
| TCCAAACCAAGCAAAGCTAA+GGG | - | chr5.3:61128478-61128497 | MS.gene009612:CDS | 40.0% | |
| TCCGACTATCATTCCAACTA+TGG | - | chr5.3:61130996-61131015 | MS.gene009612:intron | 40.0% | |
| TGAAGAACTATGGGAAGAGA+TGG | - | chr5.3:61130740-61130759 | MS.gene009612:CDS | 40.0% | |
| TGATCCAATTGTTGTCTTGC+AGG | + | chr5.3:61130779-61130798 | None:intergenic | 40.0% | |
| TGTCCTAAAGGAGTCAACAA+CGG | - | chr5.3:61131734-61131753 | MS.gene009612:CDS | 40.0% | |
| ! | AAGGGACTCTTTGTGTTGTT+AGG | - | chr5.3:61128496-61128515 | MS.gene009612:CDS | 40.0% |
| ! | AGCATCGAACCAGTTTACAA+GGG | - | chr5.3:61131061-61131080 | MS.gene009612:intron | 40.0% |
| ! | ATAAGCACCGCATACACATA+TGG | + | chr5.3:61128666-61128685 | None:intergenic | 40.0% |
| ! | CGCAAACTAGTTTGCAATAC+GGG | + | chr5.3:61131026-61131045 | None:intergenic | 40.0% |
| ! | TAAGGCACCTATGAAATTGC+TGG | + | chr5.3:61130950-61130969 | None:intergenic | 40.0% |
| ! | TCAGGTGGTTTTCACAAGTT+AGG | - | chr5.3:61130144-61130163 | MS.gene009612:CDS | 40.0% |
| ! | TTGATGGCCATATGTGTATG+CGG | - | chr5.3:61128656-61128675 | MS.gene009612:CDS | 40.0% |
| !! | ACTTTTGTTTGTTCACGGGA+AGG | - | chr5.3:61129835-61129854 | MS.gene009612:intron | 40.0% |
| !! | GGGTAAACGGATTTTCTGTT+CGG | - | chr5.3:61129767-61129786 | MS.gene009612:intron | 40.0% |
| !! | TGTTGATTCAGGGAGTAGAA+GGG | - | chr5.3:61129315-61129334 | MS.gene009612:intron | 40.0% |
| !! | TTGGTATTGATGCTAGCACT+GGG | - | chr5.3:61131561-61131580 | MS.gene009612:intron | 40.0% |
| !! | TTGTTGATTCAGGGAGTAGA+AGG | - | chr5.3:61129314-61129333 | MS.gene009612:intron | 40.0% |
| !!! | AGAGGCTTGAACGTCTTTTT+TGG | - | chr5.3:61130310-61130329 | MS.gene009612:CDS | 40.0% |
| !!! | GAACGTCTTTTTTGGTGTGA+TGG | - | chr5.3:61130318-61130337 | MS.gene009612:CDS | 40.0% |
| !!! | GAAGGTTTTAGAGAGAACAG+GGG | - | chr5.3:61129853-61129872 | MS.gene009612:intron | 40.0% |
| !!! | GGAAGGTTTTAGAGAGAACA+GGG | - | chr5.3:61129852-61129871 | MS.gene009612:intron | 40.0% |
| !!! | TGCCCGTTTGTTATTTTCTC+CGG | - | chr5.3:61130417-61130436 | MS.gene009612:CDS | 40.0% |
| AATGGGGCTAATGAGTGTGA+TGG | - | chr5.3:61129574-61129593 | MS.gene009612:intron | 45.0% | |
| ACTAATCCAATTGCTACGCC+TGG | - | chr5.3:61131650-61131669 | MS.gene009612:intron | 45.0% | |
| AGCGATTCATCCGAGTCTAA+TGG | - | chr5.3:61129613-61129632 | MS.gene009612:intron | 45.0% | |
| AGTCGTCGACGAAAGTTTAC+TGG | - | chr5.3:61131595-61131614 | MS.gene009612:intron | 45.0% | |
| ATACACGGTGAACTGTCACA+TGG | + | chr5.3:61128999-61129018 | None:intergenic | 45.0% | |
| ATGCATGTTGGGTGATATGG+AGG | - | chr5.3:61130707-61130726 | MS.gene009612:CDS | 45.0% | |
| CAAACTGTTGTCTTTGCGAC+AGG | - | chr5.3:61130456-61130475 | MS.gene009612:CDS | 45.0% | |
| CAATTCGCGACTGCTATGAA+TGG | - | chr5.3:61130525-61130544 | MS.gene009612:CDS | 45.0% | |
| CATTCATAGCAGTCGCGAAT+TGG | + | chr5.3:61130527-61130546 | None:intergenic | 45.0% | |
| CATTGAGGCAGTTGCAAATC+AGG | + | chr5.3:61129165-61129184 | None:intergenic | 45.0% | |
| CCACACCTGGTATCATTTCT+GGG | + | chr5.3:61129907-61129926 | None:intergenic | 45.0% | |
| CCTACTTGTGTGAGGACTAA+AGG | - | chr5.3:61131620-61131639 | MS.gene009612:intron | 45.0% | |
| CCTCAATCATGTAGTCAGTG+TGG | - | chr5.3:61131686-61131705 | MS.gene009612:intron | 45.0% | |
| CCTTTAGTCCTCACACAAGT+AGG | + | chr5.3:61131623-61131642 | None:intergenic | 45.0% | |
| CGGAATGCATCATCGAATGT+TGG | - | chr5.3:61130654-61130673 | MS.gene009612:CDS | 45.0% | |
| CTGTCGCAAAGACAACAGTT+TGG | + | chr5.3:61130458-61130477 | None:intergenic | 45.0% | |
| GAATGGATGCATGGATGATG+AGG | - | chr5.3:61129367-61129386 | MS.gene009612:intron | 45.0% | |
| GAGAACCCAGAAATGATACC+AGG | - | chr5.3:61129899-61129918 | MS.gene009612:intron | 45.0% | |
| GCAATGGCTAATTCATCAGG+TGG | - | chr5.3:61130129-61130148 | MS.gene009612:CDS | 45.0% | |
| GCGATTCATCCGAGTCTAAT+GGG | - | chr5.3:61129614-61129633 | MS.gene009612:intron | 45.0% | |
| GCTTCTGTTGTAGGTTATGG+AGG | - | chr5.3:61129462-61129481 | MS.gene009612:intron | 45.0% | |
| GGTGCAATGGCTAATTCATC+AGG | - | chr5.3:61130126-61130145 | MS.gene009612:CDS | 45.0% | |
| GTGAACTGTCACATGGATGA+AGG | + | chr5.3:61128992-61129011 | None:intergenic | 45.0% | |
| TCCACACCTGGTATCATTTC+TGG | + | chr5.3:61129908-61129927 | None:intergenic | 45.0% | |
| TCTGTTGTAGGTTATGGAGG+AGG | - | chr5.3:61129465-61129484 | MS.gene009612:intron | 45.0% | |
| TGGCCTTTGATGCAACCTAT+AGG | - | chr5.3:61130379-61130398 | MS.gene009612:CDS | 45.0% | |
| TGTAGTCAGTGTGGTGTGAT+AGG | - | chr5.3:61131695-61131714 | MS.gene009612:intron | 45.0% | |
| TGTCTTAGGATGGAGTCGTT+TGG | - | chr5.3:61131251-61131270 | MS.gene009612:intron | 45.0% | |
| TTGCAACTGCCTCAATGTTG+TGG | - | chr5.3:61129168-61129187 | MS.gene009612:intron | 45.0% | |
| TTGGCCTGCAAGACAACAAT+TGG | - | chr5.3:61130772-61130791 | MS.gene009612:intron | 45.0% | |
| ! | AACTAGGTGCCACAACATTG+AGG | + | chr5.3:61129180-61129199 | None:intergenic | 45.0% |
| ! | CAATACGGGTTGACCATAGT+TGG | + | chr5.3:61131012-61131031 | None:intergenic | 45.0% |
| ! | CAGCATCGAACCAGTTTACA+AGG | - | chr5.3:61131060-61131079 | MS.gene009612:intron | 45.0% |
| ! | CCACACTGACTACATGATTG+AGG | + | chr5.3:61131689-61131708 | None:intergenic | 45.0% |
| ! | TTTTGCAGAACATCCACACC+TGG | + | chr5.3:61129920-61129939 | None:intergenic | 45.0% |
| !! | AAGAGTCCCTTAGCTTTGCT+TGG | + | chr5.3:61128487-61128506 | None:intergenic | 45.0% |
| !! | ACTGTGGAAATGGAAGTGTC+TGG | - | chr5.3:61131186-61131205 | MS.gene009612:intron | 45.0% |
| !! | CTGTTGGATGGTTTGCTATG+TGG | - | chr5.3:61130012-61130031 | MS.gene009612:CDS | 45.0% |
| !! | CTTTGCTTGGTTTGGATCTC+GGG | + | chr5.3:61128474-61128493 | None:intergenic | 45.0% |
| !! | GCTTTGCTTGGTTTGGATCT+CGG | + | chr5.3:61128475-61128494 | None:intergenic | 45.0% |
| !! | GGTGTTAGCTTTCTATGTGC+CGG | + | chr5.3:61130045-61130064 | None:intergenic | 45.0% |
| !! | GTTGGTATTGATGCTAGCAC+TGG | - | chr5.3:61131560-61131579 | MS.gene009612:intron | 45.0% |
| !! | TCACCGTTGTTGACTCCTTT+AGG | + | chr5.3:61131740-61131759 | None:intergenic | 45.0% |
| !! | TCCCTTAGCTTTGCTTGGTT+TGG | + | chr5.3:61128482-61128501 | None:intergenic | 45.0% |
| !! | TGGTATTGATGCTAGCACTG+GGG | - | chr5.3:61131562-61131581 | MS.gene009612:intron | 45.0% |
| !!! | GGGAAGGTTTTAGAGAGAAC+AGG | - | chr5.3:61129851-61129870 | MS.gene009612:intron | 45.0% |
| AATCCAATTGCTACGCCTGG+TGG | - | chr5.3:61131653-61131672 | MS.gene009612:intron | 50.0% | |
| AGAGAACAGGGGATTGACCT+TGG | - | chr5.3:61129864-61129883 | MS.gene009612:intron | 50.0% | |
| ATGGACGAAGCTTCAGACGA+AGG | - | chr5.3:61129535-61129554 | MS.gene009612:intron | 50.0% | |
| CAAACGGTCCCTCAGAACTT+GGG | + | chr5.3:61129797-61129816 | None:intergenic | 50.0% | |
| CAGGTATACGAACCACGTCT+CGG | - | chr5.3:61130859-61130878 | MS.gene009612:CDS | 50.0% | |
| CATAACCACGAGCTGTTGGA+TGG | - | chr5.3:61130000-61130019 | MS.gene009612:CDS | 50.0% | |
| CCCAGAAATGATACCAGGTG+TGG | - | chr5.3:61129904-61129923 | MS.gene009612:intron | 50.0% | |
| CGCGACTGCTATGAATGGTA+AGG | - | chr5.3:61130530-61130549 | MS.gene009612:CDS | 50.0% | |
| TACTGGACCCTACTTGTGTG+AGG | - | chr5.3:61131612-61131631 | MS.gene009612:intron | 50.0% | |
| TGGGCGACTGCTCATATCAA+AGG | - | chr5.3:61130825-61130844 | MS.gene009612:intron | 50.0% | |
| TGTGTGAGGACTAAAGGGTG+TGG | - | chr5.3:61131626-61131645 | MS.gene009612:intron | 50.0% | |
| TTCGGAAGACCCAAGTTCTG+AGG | - | chr5.3:61129785-61129804 | MS.gene009612:intron | 50.0% | |
| ! | TCGGAAGACCCAAGTTCTGA+GGG | - | chr5.3:61129786-61129805 | MS.gene009612:intron | 50.0% |
| !! | CAAGTTCTGAGGGACCGTTT+GGG | - | chr5.3:61129796-61129815 | MS.gene009612:intron | 50.0% |
| ACAGGGGATTGACCTTGGAG+AGG | - | chr5.3:61129869-61129888 | MS.gene009612:intron | 55.0% | |
| CCAAACGGTCCCTCAGAACT+TGG | + | chr5.3:61129798-61129817 | None:intergenic | 55.0% | |
| CTTCCACCAGGCGTAGCAAT+TGG | + | chr5.3:61131659-61131678 | None:intergenic | 55.0% | |
| GCAAACCATCCAACAGCTCG+TGG | + | chr5.3:61130008-61130027 | None:intergenic | 55.0% | |
| GTCGAAGGATGTGGCTGAGA+GGG | - | chr5.3:61131454-61131473 | MS.gene009612:intron | 55.0% | |
| TAAACCCTCACACCGAGACG+TGG | + | chr5.3:61130874-61130893 | None:intergenic | 55.0% | |
| TGCGCATAACCACGAGCTGT+TGG | - | chr5.3:61129996-61130015 | MS.gene009612:CDS | 55.0% | |
| TGTCGAAGGATGTGGCTGAG+AGG | - | chr5.3:61131453-61131472 | MS.gene009612:intron | 55.0% | |
| TTGCTACGCCTGGTGGAAGT+AGG | - | chr5.3:61131660-61131679 | MS.gene009612:intron | 55.0% | |
| !! | CCAAGTTCTGAGGGACCGTT+TGG | - | chr5.3:61129795-61129814 | MS.gene009612:intron | 55.0% |
| GGGGATTGACCTTGGAGAGG+CGG | - | chr5.3:61129872-61129891 | MS.gene009612:intron | 60.0% | |
| TGAGGACGCCTACTTCCACC+AGG | + | chr5.3:61131671-61131690 | None:intergenic | 60.0% | |
| TTCTCGCTTCCGCCTCTCCA+AGG | + | chr5.3:61129884-61129903 | None:intergenic | 60.0% | |
| ! | ACGAACCACGTCTCGGTGTG+AGG | - | chr5.3:61130866-61130885 | MS.gene009612:CDS | 60.0% |
| ! | CGAACCACGTCTCGGTGTGA+GGG | - | chr5.3:61130867-61130886 | MS.gene009612:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 61128418 | 61131832 | 61128418 | ID=MS.gene009612 |
| chr5.3 | mRNA | 61128418 | 61131832 | 61128418 | ID=MS.gene009612.t1;Parent=MS.gene009612 |
| chr5.3 | exon | 61131733 | 61131832 | 61131733 | ID=MS.gene009612.t1.exon1;Parent=MS.gene009612.t1 |
| chr5.3 | CDS | 61131733 | 61131832 | 61131733 | ID=cds.MS.gene009612.t1;Parent=MS.gene009612.t1 |
| chr5.3 | exon | 61131218 | 61131264 | 61131218 | ID=MS.gene009612.t1.exon2;Parent=MS.gene009612.t1 |
| chr5.3 | CDS | 61131218 | 61131264 | 61131218 | ID=cds.MS.gene009612.t1;Parent=MS.gene009612.t1 |
| chr5.3 | exon | 61130859 | 61130924 | 61130859 | ID=MS.gene009612.t1.exon3;Parent=MS.gene009612.t1 |
| chr5.3 | CDS | 61130859 | 61130924 | 61130859 | ID=cds.MS.gene009612.t1;Parent=MS.gene009612.t1 |
| chr5.3 | exon | 61129970 | 61130775 | 61129970 | ID=MS.gene009612.t1.exon4;Parent=MS.gene009612.t1 |
| chr5.3 | CDS | 61129970 | 61130775 | 61129970 | ID=cds.MS.gene009612.t1;Parent=MS.gene009612.t1 |
| chr5.3 | exon | 61128418 | 61129117 | 61128418 | ID=MS.gene009612.t1.exon5;Parent=MS.gene009612.t1 |
| chr5.3 | CDS | 61128418 | 61129117 | 61128418 | ID=cds.MS.gene009612.t1;Parent=MS.gene009612.t1 |
| Gene Sequence |
| Protein sequence |
