Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene009642.t1 | XP_024632961.1 | 78.8 | 720 | 41 | 4 | 1 | 608 | 81 | 800 | 0.00E+00 | 1085.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene009642.t1 | Q9SZL8 | 22.2 | 553 | 326 | 12 | 20 | 501 | 118 | 637 | 1.8e-36 | 155.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene009642.t1 | D3YBB9 | 71.2 | 699 | 101 | 4 | 2 | 600 | 114 | 812 | 2.1e-275 | 957.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene009642.t1 | TF | FAR1 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene009642.t1 | MTR_6g090505 | 66.225 | 453 | 60 | 4 | 1 | 451 | 1 | 362 | 0.0 | 571 |
| MS.gene009642.t1 | MTR_0558s0020 | 92.208 | 231 | 18 | 0 | 1 | 231 | 66 | 296 | 3.49e-157 | 454 |
| MS.gene009642.t1 | MTR_1g083640 | 92.718 | 206 | 15 | 0 | 1 | 206 | 81 | 286 | 1.54e-139 | 408 |
| MS.gene009642.t1 | MTR_8g446020 | 91.707 | 205 | 17 | 0 | 27 | 231 | 52 | 256 | 7.20e-136 | 397 |
| MS.gene009642.t1 | MTR_2g014100 | 90.116 | 172 | 17 | 0 | 1 | 172 | 74 | 245 | 2.28e-109 | 330 |
| MS.gene009642.t1 | MTR_0337s0040 | 79.793 | 193 | 39 | 0 | 4 | 196 | 30 | 222 | 2.17e-107 | 323 |
| MS.gene009642.t1 | MTR_0337s0060 | 61.512 | 291 | 26 | 5 | 319 | 595 | 21 | 239 | 1.04e-102 | 312 |
| MS.gene009642.t1 | MTR_1g055240 | 91.549 | 142 | 12 | 0 | 27 | 168 | 3 | 144 | 1.97e-89 | 275 |
| MS.gene009642.t1 | MTR_0019s0290 | 86.842 | 152 | 20 | 0 | 18 | 169 | 9 | 160 | 5.57e-89 | 273 |
| MS.gene009642.t1 | MTR_3g028680 | 81.646 | 158 | 26 | 1 | 454 | 608 | 1 | 158 | 3.39e-83 | 259 |
| MS.gene009642.t1 | MTR_3g008240 | 88.406 | 138 | 16 | 0 | 1 | 138 | 66 | 203 | 1.23e-81 | 256 |
| MS.gene009642.t1 | MTR_2g067090 | 81.935 | 155 | 25 | 1 | 457 | 608 | 99 | 253 | 3.13e-79 | 253 |
| MS.gene009642.t1 | MTR_4g040430 | 86.957 | 138 | 14 | 1 | 1 | 138 | 65 | 198 | 4.71e-79 | 249 |
| MS.gene009642.t1 | MTR_4g133495 | 67.241 | 174 | 28 | 3 | 419 | 586 | 95 | 245 | 2.16e-65 | 216 |
| MS.gene009642.t1 | MTR_4g133340 | 67.241 | 174 | 28 | 3 | 419 | 586 | 95 | 245 | 2.16e-65 | 216 |
| MS.gene009642.t1 | MTR_5g071590 | 85.577 | 104 | 15 | 0 | 1 | 104 | 78 | 181 | 1.01e-59 | 198 |
| MS.gene009642.t1 | MTR_2g067130 | 87.179 | 78 | 10 | 0 | 531 | 608 | 46 | 123 | 2.94e-37 | 136 |
| MS.gene009642.t1 | MTR_1281s0010 | 90.476 | 63 | 6 | 0 | 1 | 63 | 47 | 109 | 9.51e-33 | 122 |
| MS.gene009642.t1 | MTR_6g051425 | 32.843 | 204 | 125 | 4 | 21 | 224 | 64 | 255 | 3.45e-27 | 113 |
| MS.gene009642.t1 | MTR_1g070355 | 27.053 | 207 | 137 | 2 | 21 | 227 | 119 | 311 | 3.23e-16 | 82.4 |
| MS.gene009642.t1 | MTR_0337s0050 | 76.316 | 38 | 9 | 0 | 195 | 232 | 14 | 51 | 5.28e-15 | 70.9 |
| MS.gene009642.t1 | MTR_0402s0040 | 25.333 | 150 | 97 | 3 | 20 | 169 | 71 | 205 | 8.50e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene009642.t1 | AT4G15090 | 25.916 | 382 | 222 | 13 | 234 | 593 | 359 | 701 | 8.69e-25 | 110 |
| MS.gene009642.t1 | AT4G15090 | 25.916 | 382 | 222 | 13 | 234 | 593 | 359 | 701 | 8.69e-25 | 110 |
| MS.gene009642.t1 | AT4G15090 | 25.916 | 382 | 222 | 13 | 234 | 593 | 359 | 701 | 8.69e-25 | 110 |
| MS.gene009642.t1 | AT4G15090 | 25.916 | 382 | 222 | 13 | 234 | 593 | 359 | 701 | 8.69e-25 | 110 |
| MS.gene009642.t1 | AT4G15090 | 25.916 | 382 | 222 | 13 | 234 | 593 | 359 | 701 | 8.69e-25 | 110 |
| MS.gene009642.t1 | AT4G38180 | 29.032 | 217 | 141 | 4 | 20 | 236 | 118 | 321 | 4.26e-23 | 105 |
| MS.gene009642.t1 | AT4G38180 | 22.302 | 278 | 189 | 7 | 231 | 501 | 380 | 637 | 3.06e-17 | 86.3 |
| MS.gene009642.t1 | AT1G76320 | 25.072 | 347 | 231 | 9 | 234 | 578 | 296 | 615 | 5.86e-21 | 97.8 |
| MS.gene009642.t1 | AT1G76320 | 25.072 | 347 | 231 | 9 | 234 | 578 | 296 | 615 | 8.33e-21 | 97.4 |
| MS.gene009642.t1 | AT1G76320 | 25.072 | 347 | 231 | 9 | 234 | 578 | 296 | 615 | 8.73e-21 | 97.4 |
| MS.gene009642.t1 | AT1G76320 | 25.072 | 347 | 231 | 9 | 234 | 578 | 296 | 615 | 8.73e-21 | 97.4 |
| MS.gene009642.t1 | AT3G22170 | 22.956 | 318 | 212 | 6 | 234 | 544 | 368 | 659 | 2.78e-19 | 92.8 |
| MS.gene009642.t1 | AT3G22170 | 22.956 | 318 | 212 | 6 | 234 | 544 | 368 | 659 | 2.78e-19 | 92.8 |
| MS.gene009642.t1 | AT4G19990 | 25.000 | 304 | 189 | 9 | 234 | 525 | 250 | 526 | 6.24e-18 | 88.6 |
| MS.gene009642.t1 | AT4G19990 | 25.000 | 304 | 189 | 9 | 234 | 525 | 307 | 583 | 8.00e-18 | 88.2 |
| MS.gene009642.t1 | AT4G19990 | 25.000 | 304 | 189 | 9 | 234 | 525 | 307 | 583 | 8.00e-18 | 88.2 |
| MS.gene009642.t1 | AT4G19990 | 24.671 | 304 | 190 | 8 | 234 | 525 | 321 | 597 | 8.27e-18 | 88.2 |
| MS.gene009642.t1 | AT4G19990 | 25.000 | 304 | 189 | 9 | 234 | 525 | 307 | 583 | 8.49e-18 | 88.2 |
| MS.gene009642.t1 | AT4G19990 | 25.000 | 304 | 189 | 9 | 234 | 525 | 307 | 583 | 1.10e-17 | 87.8 |
| MS.gene009642.t1 | AT4G19990 | 25.000 | 304 | 189 | 9 | 234 | 525 | 307 | 583 | 1.10e-17 | 87.8 |
| MS.gene009642.t1 | AT4G38170 | 23.125 | 320 | 198 | 11 | 252 | 555 | 168 | 455 | 1.01e-16 | 84.0 |
| MS.gene009642.t1 | AT3G06250 | 20.677 | 561 | 270 | 21 | 20 | 497 | 235 | 703 | 9.52e-15 | 78.2 |
| MS.gene009642.t1 | AT3G06250 | 20.677 | 561 | 270 | 21 | 20 | 497 | 235 | 703 | 9.52e-15 | 78.2 |
| MS.gene009642.t1 | AT3G06250 | 20.677 | 561 | 270 | 21 | 20 | 497 | 235 | 703 | 9.52e-15 | 78.2 |
| MS.gene009642.t1 | AT2G27110 | 22.751 | 378 | 252 | 13 | 231 | 597 | 182 | 530 | 1.54e-14 | 77.8 |
| MS.gene009642.t1 | AT2G27110 | 22.788 | 373 | 248 | 13 | 231 | 592 | 327 | 670 | 1.73e-14 | 77.8 |
| MS.gene009642.t1 | AT2G27110 | 22.788 | 373 | 248 | 13 | 231 | 592 | 327 | 670 | 1.73e-14 | 77.8 |
| MS.gene009642.t1 | AT5G28530 | 25.877 | 228 | 144 | 5 | 21 | 236 | 100 | 314 | 2.80e-12 | 70.5 |
| MS.gene009642.t1 | AT5G28530 | 25.877 | 228 | 144 | 5 | 21 | 236 | 100 | 314 | 2.82e-12 | 70.5 |
| MS.gene009642.t1 | AT5G28530 | 25.877 | 228 | 144 | 5 | 21 | 236 | 100 | 314 | 2.82e-12 | 70.5 |
| MS.gene009642.t1 | AT5G18960 | 24.275 | 276 | 172 | 9 | 231 | 497 | 480 | 727 | 5.59e-12 | 69.3 |
| MS.gene009642.t1 | AT5G18960 | 24.275 | 276 | 172 | 9 | 231 | 497 | 480 | 727 | 5.59e-12 | 69.3 |
| MS.gene009642.t1 | AT2G32250 | 21.984 | 373 | 245 | 12 | 232 | 591 | 301 | 640 | 1.61e-11 | 68.2 |
| MS.gene009642.t1 | AT2G32250 | 21.984 | 373 | 245 | 12 | 232 | 591 | 260 | 599 | 1.76e-11 | 67.8 |
| MS.gene009642.t1 | AT2G32250 | 21.984 | 373 | 245 | 12 | 232 | 591 | 260 | 599 | 1.78e-11 | 67.8 |
| MS.gene009642.t1 | AT2G32250 | 21.984 | 373 | 245 | 12 | 232 | 591 | 301 | 640 | 2.09e-11 | 67.8 |
| MS.gene009642.t1 | AT2G32250 | 21.984 | 373 | 245 | 12 | 232 | 591 | 301 | 640 | 2.09e-11 | 67.8 |
| MS.gene009642.t1 | AT2G32250 | 21.984 | 373 | 245 | 12 | 232 | 591 | 301 | 640 | 2.28e-11 | 67.4 |
| MS.gene009642.t1 | AT2G32250 | 21.984 | 373 | 245 | 12 | 232 | 591 | 301 | 640 | 2.28e-11 | 67.4 |
| MS.gene009642.t1 | AT2G32250 | 21.984 | 373 | 245 | 12 | 232 | 591 | 301 | 640 | 2.28e-11 | 67.4 |
Find 89 sgRNAs with CRISPR-Local
Find 185 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGCCGCTTCTTTGACTTAAT+TGG | 0.120606 | 5.3:-60727073 | None:intergenic |
| TCATGCTGAGTTGGACTTTA+AGG | 0.133287 | 5.3:+60726253 | MS.gene009642:CDS |
| CTTTAGTCATTTCAACATTA+TGG | 0.194287 | 5.3:+60726211 | MS.gene009642:CDS |
| GAATTTAAGAAACGAGTTAT+TGG | 0.249169 | 5.3:+60727673 | MS.gene009642:CDS |
| CAACTAGATTATTCTCTATT+CGG | 0.265452 | 5.3:+60725100 | MS.gene009642:CDS |
| TTCTTTGACTTAATTGGATT+TGG | 0.266522 | 5.3:-60727067 | None:intergenic |
| TCTGCTGTTGGCCTGTTGTT+AGG | 0.299104 | 5.3:-60724593 | None:intergenic |
| GCATACGATTTGTGTAAGTT+TGG | 0.305085 | 5.3:-60726067 | None:intergenic |
| CGATCATGATCTTCAAAACT+TGG | 0.305304 | 5.3:-60726551 | None:intergenic |
| TTGAAGATCTTGGAGTTCTT+AGG | 0.331625 | 5.3:+60726671 | MS.gene009642:CDS |
| GCCGATATTTATTGTTTGTT+CGG | 0.341758 | 5.3:-60725150 | None:intergenic |
| TTACTTCTCGAAATGATCTA+AGG | 0.358741 | 5.3:-60724784 | None:intergenic |
| CTCGACGGTGTTCTTGAAGC+TGG | 0.383392 | 5.3:+60726911 | MS.gene009642:CDS |
| GGACCGCATCAGCTGACTAT+TGG | 0.383948 | 5.3:-60726306 | None:intergenic |
| AACTAGATTATTCTCTATTC+GGG | 0.384365 | 5.3:+60725101 | MS.gene009642:CDS |
| AACAATAAATATCGGCCATT+AGG | 0.388497 | 5.3:+60725157 | MS.gene009642:CDS |
| ACCGAACAAACAATAAATAT+CGG | 0.389395 | 5.3:+60725149 | MS.gene009642:CDS |
| CGAGAAGTAATTGAAGTTCA+AGG | 0.391019 | 5.3:+60724797 | MS.gene009642:CDS |
| GAGAACGTCTTATGAAGTTA+TGG | 0.394356 | 5.3:+60724859 | MS.gene009642:CDS |
| TTTGGTCTTTCTTTGAACTT+TGG | 0.398856 | 5.3:-60727049 | None:intergenic |
| TTCCTTCAAATACTATTATG+AGG | 0.399583 | 5.3:+60726385 | MS.gene009642:CDS |
| GACCGCATCAGCTGACTATT+GGG | 0.402584 | 5.3:-60726305 | None:intergenic |
| GAAGGCCTACCTCAGACTTT+AGG | 0.402909 | 5.3:+60726036 | MS.gene009642:CDS |
| GAAAGGGTTGGTTGTAAAGT+TGG | 0.408667 | 5.3:+60724662 | MS.gene009642:CDS |
| GAAGTTATGGGTCAAGGAGT+TGG | 0.428685 | 5.3:+60724872 | MS.gene009642:CDS |
| GAGGAGTTGCTTCTTTCTAA+AGG | 0.437852 | 5.3:+60726944 | MS.gene009642:CDS |
| TTCTTTGAACTTTGGTGCGG+TGG | 0.447203 | 5.3:-60727041 | None:intergenic |
| CGTTATGTTTGTAACAAAGA+AGG | 0.449439 | 5.3:+60724545 | MS.gene009642:CDS |
| TATGCATTGGTCTTCAGCTT+GGG | 0.450920 | 5.3:+60726085 | MS.gene009642:CDS |
| ATGTGTATAAGATATATAGA+TGG | 0.452819 | 5.3:+60724714 | MS.gene009642:CDS |
| GCTCTTATAAATTCTAAAGC+TGG | 0.462891 | 5.3:+60724827 | MS.gene009642:CDS |
| AGAACGTCTTATGAAGTTAT+GGG | 0.466325 | 5.3:+60724860 | MS.gene009642:CDS |
| ACAAAACAAGAAATTTGATA+AGG | 0.468895 | 5.3:+60724511 | MS.gene009642:CDS |
| GTTTACTTAATCCTAACAAC+AGG | 0.470860 | 5.3:+60724582 | MS.gene009642:CDS |
| GAGTTTGAGTTTAATGTGAA+TGG | 0.471233 | 5.3:+60727646 | MS.gene009642:CDS |
| CGCTTTAAAACATATTGTCC+AGG | 0.471916 | 5.3:-60726728 | None:intergenic |
| AGTTGGAATATATTTGAAGC+TGG | 0.472100 | 5.3:+60724679 | MS.gene009642:CDS |
| CTTTCTAAAGGTATTCGTAC+AGG | 0.474070 | 5.3:+60726956 | MS.gene009642:CDS |
| CTAAGGTAACGCGAATGCTC+TGG | 0.476897 | 5.3:-60724767 | None:intergenic |
| ATCATGATCGATTTGATGAA+AGG | 0.476999 | 5.3:+60726564 | MS.gene009642:CDS |
| GTATGCATTGGTCTTCAGCT+TGG | 0.479582 | 5.3:+60726084 | MS.gene009642:CDS |
| ATGTCGTATGTTTGAGAACA+TGG | 0.479793 | 5.3:+60726628 | MS.gene009642:CDS |
| TTTAAGTCTGAAAACCGAAA+AGG | 0.483010 | 5.3:-60724911 | None:intergenic |
| CTCCTCATAATAGTATTTGA+AGG | 0.485089 | 5.3:-60726387 | None:intergenic |
| GATCATGATCTTCAAAACTT+GGG | 0.487945 | 5.3:-60726550 | None:intergenic |
| CATTCTTTGAAGACAATACC+TGG | 0.489494 | 5.3:+60726710 | MS.gene009642:CDS |
| TATGAGGAGGACACAACAAA+AGG | 0.490908 | 5.3:+60726401 | MS.gene009642:CDS |
| ACATTATGGTTCAGAGAATG+AGG | 0.494022 | 5.3:+60726225 | MS.gene009642:CDS |
| TTACAACCAACCCTTTCCTC+AGG | 0.501431 | 5.3:-60724656 | None:intergenic |
| TCTTTGAACTTTGGTGCGGT+GGG | 0.503874 | 5.3:-60727040 | None:intergenic |
| GAGGGATAATCATGCTGAGT+TGG | 0.508852 | 5.3:+60726244 | MS.gene009642:CDS |
| CTGTTGGTGAAACATCTGAT+GGG | 0.515754 | 5.3:+60727011 | MS.gene009642:CDS |
| TAAAGAATCGAACAAGTGAA+TGG | 0.519618 | 5.3:-60726193 | None:intergenic |
| TAACAAAGAAGGTTTCAAGA+AGG | 0.525236 | 5.3:+60724556 | MS.gene009642:CDS |
| TAAGATATATAGATGGGATG+TGG | 0.528498 | 5.3:+60724721 | MS.gene009642:CDS |
| CATAATAGTATTTGAAGGAA+AGG | 0.529686 | 5.3:-60726382 | None:intergenic |
| TGGGCTTTGTTCATGGCACA+TGG | 0.532868 | 5.3:+60725875 | MS.gene009642:CDS |
| AATCGAACAAGTGAATGGTC+TGG | 0.540971 | 5.3:-60726188 | None:intergenic |
| ATGAGGAGGACACAACAAAA+GGG | 0.542065 | 5.3:+60726402 | MS.gene009642:CDS |
| AACAAAGAAGGTTTCAAGAA+GGG | 0.545537 | 5.3:+60724557 | MS.gene009642:CDS |
| AAGATCTTGGAGTTCTTAGG+TGG | 0.553166 | 5.3:+60726674 | MS.gene009642:CDS |
| GGCCTACCTCAGACTTTAGG+TGG | 0.565384 | 5.3:+60726039 | MS.gene009642:CDS |
| TCTTCAAAAGTAGCTGCTGT+TGG | 0.568528 | 5.3:+60726995 | MS.gene009642:CDS |
| GCTGTTGGTGAAACATCTGA+TGG | 0.570811 | 5.3:+60727010 | MS.gene009642:CDS |
| GAATGCTCTGGTTTATGTAA+TGG | 0.573489 | 5.3:-60724755 | None:intergenic |
| CTTACACAAATCGTATGCAT+TGG | 0.574982 | 5.3:+60726072 | MS.gene009642:CDS |
| ATCATGATCTTCAAAACTTG+GGG | 0.577988 | 5.3:-60726549 | None:intergenic |
| GTTATGGGTCAAGGAGTTGG+AGG | 0.578191 | 5.3:+60724875 | MS.gene009642:CDS |
| TCTTATGAAGTTATGGGTCA+AGG | 0.580120 | 5.3:+60724866 | MS.gene009642:CDS |
| TGTCGTATGTTTGAGAACAT+GGG | 0.587312 | 5.3:+60726629 | MS.gene009642:CDS |
| TGTGTATAAGATATATAGAT+GGG | 0.601002 | 5.3:+60724715 | MS.gene009642:CDS |
| TTGATATCGTTGTGCTTGAG+TGG | 0.601464 | 5.3:-60726819 | None:intergenic |
| ACCAGTGGACTGTCTGCTGT+TGG | 0.602965 | 5.3:-60724605 | None:intergenic |
| GTATTCAGTGACAACATTGA+CGG | 0.605803 | 5.3:-60726795 | None:intergenic |
| CTTCAAATACTATTATGAGG+AGG | 0.607664 | 5.3:+60726388 | MS.gene009642:CDS |
| GCCAACAGCAGACAGTCCAC+TGG | 0.611268 | 5.3:+60724604 | MS.gene009642:CDS |
| TTTGAAGACTTAGATGGCGT+CGG | 0.623016 | 5.3:-60726980 | None:intergenic |
| ATCCCAATAGTCAGCTGATG+CGG | 0.623586 | 5.3:+60726303 | MS.gene009642:CDS |
| ATCCAATTAAGTCAAAGAAG+CGG | 0.625663 | 5.3:+60727071 | MS.gene009642:CDS |
| CATTATGGTTCAGAGAATGA+GGG | 0.643278 | 5.3:+60726226 | MS.gene009642:CDS |
| TTCACAAACTCAATAACCAG+TGG | 0.650808 | 5.3:-60724620 | None:intergenic |
| GATTTCAGCTTATCGACAGA+CGG | 0.652942 | 5.3:-60726770 | None:intergenic |
| GACAAGCCACCTAAAGTCTG+AGG | 0.653221 | 5.3:-60726045 | None:intergenic |
| TCTTTCTTTGAACTTTGGTG+CGG | 0.659854 | 5.3:-60727044 | None:intergenic |
| TGTTGGTGAAACATCTGATG+GGG | 0.680741 | 5.3:+60727012 | MS.gene009642:CDS |
| AGCCACCTAAAGTCTGAGGT+AGG | 0.684957 | 5.3:-60726041 | None:intergenic |
| ACTAGATTATTCTCTATTCG+GGG | 0.686575 | 5.3:+60725102 | MS.gene009642:CDS |
| AGGGGTGTACTTGTTTACAA+CGG | 0.695086 | 5.3:-60726327 | None:intergenic |
| TAAGAAACGAGTTATTGGTG+CGG | 0.706623 | 5.3:+60727678 | MS.gene009642:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTATTTTGATATGATTTAT+TGG | + | chr5.3:60727257-60727276 | MS.gene009642:intron | 10.0% |
| !! | AAACCAAAATAATTATCTAA+TGG | - | chr5.3:60727407-60727426 | None:intergenic | 15.0% |
| !!! | AAACCATTAGATAATTATTT+TGG | + | chr5.3:60727401-60727420 | MS.gene009642:intron | 15.0% |
| !!! | AATCAAATTTTGACTATAAT+TGG | + | chr5.3:60725985-60726004 | MS.gene009642:CDS | 15.0% |
| !!! | ATCAAATTTTGACTATAATT+GGG | + | chr5.3:60725986-60726005 | MS.gene009642:CDS | 15.0% |
| !!! | ATGTATTGATGATTATATTT+TGG | + | chr5.3:60727310-60727329 | MS.gene009642:intron | 15.0% |
| !!! | ATTGATTGTTTTTATAAGTT+TGG | + | chr5.3:60727197-60727216 | MS.gene009642:intron | 15.0% |
| !!! | TTTTATAAGTTTGGTTTTTT+AGG | + | chr5.3:60727206-60727225 | MS.gene009642:intron | 15.0% |
| !!! | TTTTGATGAGTTAAATAATT+TGG | + | chr5.3:60725944-60725963 | MS.gene009642:CDS | 15.0% |
| !! | AAACCATAAGTAGTATTTAA+TGG | - | chr5.3:60727450-60727469 | None:intergenic | 20.0% |
| !! | AAACCATTAAATACTACTTA+TGG | + | chr5.3:60727444-60727463 | MS.gene009642:intron | 20.0% |
| !! | ACAAAACAAGAAATTTGATA+AGG | + | chr5.3:60724511-60724530 | MS.gene009642:CDS | 20.0% |
| !! | ATGTGTATAAGATATATAGA+TGG | + | chr5.3:60724714-60724733 | MS.gene009642:CDS | 20.0% |
| !! | TGAATATCATAGTAAAAAGA+TGG | - | chr5.3:60725028-60725047 | None:intergenic | 20.0% |
| !! | TGTGTATAAGATATATAGAT+GGG | + | chr5.3:60724715-60724734 | MS.gene009642:CDS | 20.0% |
| !!! | ATGATGATAAATTGTTTTGA+TGG | + | chr5.3:60726014-60726033 | MS.gene009642:CDS | 20.0% |
| !!! | TTCTTATAATTTGTGATTAC+AGG | + | chr5.3:60725515-60725534 | MS.gene009642:intron | 20.0% |
| !!! | TTTTTCAAAGTTTTCACAAT+TGG | + | chr5.3:60726440-60726459 | MS.gene009642:CDS | 20.0% |
| ! | AACTAGATTATTCTCTATTC+GGG | + | chr5.3:60725101-60725120 | MS.gene009642:CDS | 25.0% |
| ! | AATAAATGCAAATCAAGAAG+GGG | - | chr5.3:60726348-60726367 | None:intergenic | 25.0% |
| ! | ACACACTTATTAGAATACTT+AGG | + | chr5.3:60725451-60725470 | MS.gene009642:intron | 25.0% |
| ! | ACCGAACAAACAATAAATAT+CGG | + | chr5.3:60725149-60725168 | MS.gene009642:CDS | 25.0% |
| ! | AGTAAAAAACACTAACCTAA+TGG | - | chr5.3:60725175-60725194 | None:intergenic | 25.0% |
| ! | ATGATTGTCAAAACCAATAA+AGG | - | chr5.3:60725679-60725698 | None:intergenic | 25.0% |
| ! | ATTATGAAAAAGCTAGAGAA+AGG | + | chr5.3:60727104-60727123 | MS.gene009642:intron | 25.0% |
| ! | CAACTAGATTATTCTCTATT+CGG | + | chr5.3:60725100-60725119 | MS.gene009642:CDS | 25.0% |
| ! | CATAATAGTATTTGAAGGAA+AGG | - | chr5.3:60726385-60726404 | None:intergenic | 25.0% |
| ! | CTTACTTATTTGAACTACAT+GGG | + | chr5.3:60725299-60725318 | MS.gene009642:intron | 25.0% |
| ! | CTTTAGTCATTTCAACATTA+TGG | + | chr5.3:60726211-60726230 | MS.gene009642:CDS | 25.0% |
| ! | GAATAAATGCAAATCAAGAA+GGG | - | chr5.3:60726349-60726368 | None:intergenic | 25.0% |
| ! | GAATTTAAGAAACGAGTTAT+TGG | + | chr5.3:60727673-60727692 | MS.gene009642:CDS | 25.0% |
| ! | TAAATTTCAACTGCCTTTAT+TGG | + | chr5.3:60725663-60725682 | MS.gene009642:intron | 25.0% |
| ! | TCTTACTTATTTGAACTACA+TGG | + | chr5.3:60725298-60725317 | MS.gene009642:intron | 25.0% |
| ! | TGAATAAATGCAAATCAAGA+AGG | - | chr5.3:60726350-60726369 | None:intergenic | 25.0% |
| ! | TTCCTTCAAATACTATTATG+AGG | + | chr5.3:60726385-60726404 | MS.gene009642:CDS | 25.0% |
| !! | AACTTTGAAAAACTTCTCAA+AGG | - | chr5.3:60726432-60726451 | None:intergenic | 25.0% |
| !! | AGAAAAATTTTAGATGACTC+TGG | - | chr5.3:60726893-60726912 | None:intergenic | 25.0% |
| !! | TGTTGTATTTTGTTCTGATA+TGG | + | chr5.3:60725634-60725653 | MS.gene009642:intron | 25.0% |
| !! | TTAACCATGTTGTTTGTTTA+GGG | + | chr5.3:60725323-60725342 | MS.gene009642:intron | 25.0% |
| !! | TTCTTTGACTTAATTGGATT+TGG | - | chr5.3:60727070-60727089 | None:intergenic | 25.0% |
| !! | TTTAACCATGTTGTTTGTTT+AGG | + | chr5.3:60725322-60725341 | MS.gene009642:intron | 25.0% |
| !! | TTTGTTTCTTCTGATTGATA+AGG | - | chr5.3:60727138-60727157 | None:intergenic | 25.0% |
| !!! | AAGACATAGCTAGTATTTTT+TGG | + | chr5.3:60725062-60725081 | MS.gene009642:CDS | 25.0% |
| !!! | ATTTATATTTTGAACTGCCT+AGG | + | chr5.3:60725399-60725418 | MS.gene009642:intron | 25.0% |
| !!! | TCATCTAAAATTTTTCTCGA+CGG | + | chr5.3:60726896-60726915 | MS.gene009642:CDS | 25.0% |
| !!! | TGATAAATTGTTTTGATGGA+AGG | + | chr5.3:60726018-60726037 | MS.gene009642:CDS | 25.0% |
| AAAACACCTGGAAAACAATT+CGG | - | chr5.3:60725852-60725871 | None:intergenic | 30.0% | |
| AAATCCCTAAACAAACAACA+TGG | - | chr5.3:60725330-60725349 | None:intergenic | 30.0% | |
| AACAAAGAAGGTTTCAAGAA+GGG | + | chr5.3:60724557-60724576 | MS.gene009642:CDS | 30.0% | |
| AACAATAAATATCGGCCATT+AGG | + | chr5.3:60725157-60725176 | MS.gene009642:CDS | 30.0% | |
| AAGAAGAAGGTTTAATGTTG+GGG | - | chr5.3:60727588-60727607 | None:intergenic | 30.0% | |
| ACTAGATTATTCTCTATTCG+GGG | + | chr5.3:60725102-60725121 | MS.gene009642:CDS | 30.0% | |
| AGAACGTCTTATGAAGTTAT+GGG | + | chr5.3:60724860-60724879 | MS.gene009642:CDS | 30.0% | |
| AGAAGAAGAAGGTTTAATGT+TGG | - | chr5.3:60727590-60727609 | None:intergenic | 30.0% | |
| ATCATGATCTTCAAAACTTG+GGG | - | chr5.3:60726552-60726571 | None:intergenic | 30.0% | |
| ATCCAATTAAGTCAAAGAAG+CGG | + | chr5.3:60727071-60727090 | MS.gene009642:CDS | 30.0% | |
| CGTTATGTTTGTAACAAAGA+AGG | + | chr5.3:60724545-60724564 | MS.gene009642:CDS | 30.0% | |
| CTCCTCATAATAGTATTTGA+AGG | - | chr5.3:60726390-60726409 | None:intergenic | 30.0% | |
| CTTCAAATACTATTATGAGG+AGG | + | chr5.3:60726388-60726407 | MS.gene009642:CDS | 30.0% | |
| GAAGAAGAAGGTTTAATGTT+GGG | - | chr5.3:60727589-60727608 | None:intergenic | 30.0% | |
| GAGAATGCAAAGAAAAATCT+TGG | + | chr5.3:60725900-60725919 | MS.gene009642:CDS | 30.0% | |
| GATCATGATCTTCAAAACTT+GGG | - | chr5.3:60726553-60726572 | None:intergenic | 30.0% | |
| GCCGATATTTATTGTTTGTT+CGG | - | chr5.3:60725153-60725172 | None:intergenic | 30.0% | |
| GTAAACATAAAATGAAAGCG+CGG | + | chr5.3:60727545-60727564 | MS.gene009642:intron | 30.0% | |
| GTTTACTTAATCCTAACAAC+AGG | + | chr5.3:60724582-60724601 | MS.gene009642:CDS | 30.0% | |
| TAAAGAATCGAACAAGTGAA+TGG | - | chr5.3:60726196-60726215 | None:intergenic | 30.0% | |
| TAACAAAGAAGGTTTCAAGA+AGG | + | chr5.3:60724556-60724575 | MS.gene009642:CDS | 30.0% | |
| TAAGAACTATAGTCAATCCT+AGG | - | chr5.3:60725283-60725302 | None:intergenic | 30.0% | |
| TAAGATATATAGATGGGATG+TGG | + | chr5.3:60724721-60724740 | MS.gene009642:CDS | 30.0% | |
| TAATAGTTAAACCATGACTC+TGG | + | chr5.3:60727503-60727522 | MS.gene009642:intron | 30.0% | |
| TTACTTCTCGAAATGATCTA+AGG | - | chr5.3:60724787-60724806 | None:intergenic | 30.0% | |
| TTTAAGTCTGAAAACCGAAA+AGG | - | chr5.3:60724914-60724933 | None:intergenic | 30.0% | |
| ! | AGTTGGAATATATTTGAAGC+TGG | + | chr5.3:60724679-60724698 | MS.gene009642:CDS | 30.0% |
| ! | ATTTAGTTTACGCATTCATG+AGG | + | chr5.3:60725485-60725504 | MS.gene009642:intron | 30.0% |
| ! | CAAAGTTTTCACAATTGGTA+AGG | + | chr5.3:60726445-60726464 | MS.gene009642:intron | 30.0% |
| ! | GAGTTTGAGTTTAATGTGAA+TGG | + | chr5.3:60727646-60727665 | MS.gene009642:CDS | 30.0% |
| ! | GCGCTTTCATTTTATGTTTA+CGG | - | chr5.3:60727546-60727565 | None:intergenic | 30.0% |
| ! | TAAACATAAAATGAAAGCGC+GGG | + | chr5.3:60727546-60727565 | MS.gene009642:intron | 30.0% |
| ! | TTTGGTCTTTCTTTGAACTT+TGG | - | chr5.3:60727052-60727071 | None:intergenic | 30.0% |
| !! | ATCATGATCGATTTGATGAA+AGG | + | chr5.3:60726564-60726583 | MS.gene009642:CDS | 30.0% |
| !! | CTTGATTTGCATTTATTCAC+AGG | + | chr5.3:60726351-60726370 | MS.gene009642:intron | 30.0% |
| !! | GCTCTTATAAATTCTAAAGC+TGG | + | chr5.3:60724827-60724846 | MS.gene009642:CDS | 30.0% |
| !!! | GACAATATGTTTTAAAGCGT+TGG | + | chr5.3:60726732-60726751 | MS.gene009642:CDS | 30.0% |
| !!! | TAGTGTTTTTTACTTCTCTC+AGG | + | chr5.3:60725181-60725200 | MS.gene009642:intron | 30.0% |
| AAAAAATGCACTGTTTGCAC+GGG | - | chr5.3:60725928-60725947 | None:intergenic | 35.0% | |
| AATCGTCTGTGGTTTCTTAT+TGG | - | chr5.3:60725793-60725812 | None:intergenic | 35.0% | |
| AATTCGTCAAAAAGAGATGG+TGG | + | chr5.3:60724949-60724968 | MS.gene009642:CDS | 35.0% | |
| ACATTATGGTTCAGAGAATG+AGG | + | chr5.3:60726225-60726244 | MS.gene009642:CDS | 35.0% | |
| AGCAATGACTAATTAAGGGT+TGG | + | chr5.3:60725540-60725559 | MS.gene009642:intron | 35.0% | |
| AGGCTAGCAATGACTAATTA+AGG | + | chr5.3:60725535-60725554 | MS.gene009642:intron | 35.0% | |
| AGTAAAAAGATGGTTTCGAG+AGG | - | chr5.3:60725018-60725037 | None:intergenic | 35.0% | |
| ATGTCGTATGTTTGAGAACA+TGG | + | chr5.3:60726628-60726647 | MS.gene009642:CDS | 35.0% | |
| CAAAAAATGCACTGTTTGCA+CGG | - | chr5.3:60725929-60725948 | None:intergenic | 35.0% | |
| CATTATGGTTCAGAGAATGA+GGG | + | chr5.3:60726226-60726245 | MS.gene009642:CDS | 35.0% | |
| CGAGAAGTAATTGAAGTTCA+AGG | + | chr5.3:60724797-60724816 | MS.gene009642:CDS | 35.0% | |
| CGATCATGATCTTCAAAACT+TGG | - | chr5.3:60726554-60726573 | None:intergenic | 35.0% | |
| CTTACACAAATCGTATGCAT+TGG | + | chr5.3:60726072-60726091 | MS.gene009642:CDS | 35.0% | |
| GAAAGAAAAACCTGAGGAAA+GGG | + | chr5.3:60724646-60724665 | MS.gene009642:CDS | 35.0% | |
| GACAATTCGTCAAAAAGAGA+TGG | + | chr5.3:60724946-60724965 | MS.gene009642:CDS | 35.0% | |
| GAGAACGTCTTATGAAGTTA+TGG | + | chr5.3:60724859-60724878 | MS.gene009642:CDS | 35.0% | |
| GCATACGATTTGTGTAAGTT+TGG | - | chr5.3:60726070-60726089 | None:intergenic | 35.0% | |
| GGCTAGCAATGACTAATTAA+GGG | + | chr5.3:60725536-60725555 | MS.gene009642:intron | 35.0% | |
| GTAAAAAGATGGTTTCGAGA+GGG | - | chr5.3:60725017-60725036 | None:intergenic | 35.0% | |
| GTATTCAGTGACAACATTGA+CGG | - | chr5.3:60726798-60726817 | None:intergenic | 35.0% | |
| TAAGAAACGAGTTATTGGTG+CGG | + | chr5.3:60727678-60727697 | MS.gene009642:CDS | 35.0% | |
| TCCAAAACATCAACATTGGA+AGG | - | chr5.3:60726506-60726525 | None:intergenic | 35.0% | |
| TCGTTAGAAGAAGAAGAAGA+AGG | - | chr5.3:60727601-60727620 | None:intergenic | 35.0% | |
| TCTTATGAAGTTATGGGTCA+AGG | + | chr5.3:60724866-60724885 | MS.gene009642:CDS | 35.0% | |
| TCTTTCTTTGAACTTTGGTG+CGG | - | chr5.3:60727047-60727066 | None:intergenic | 35.0% | |
| TGCATCCAAAACATCAACAT+TGG | - | chr5.3:60726510-60726529 | None:intergenic | 35.0% | |
| TGTCGTATGTTTGAGAACAT+GGG | + | chr5.3:60726629-60726648 | MS.gene009642:CDS | 35.0% | |
| TGTTCTTGAAGCTGGAAAAA+AGG | + | chr5.3:60726919-60726938 | MS.gene009642:CDS | 35.0% | |
| TTCACAAACTCAATAACCAG+TGG | - | chr5.3:60724623-60724642 | None:intergenic | 35.0% | |
| TTGAAGATCTTGGAGTTCTT+AGG | + | chr5.3:60726671-60726690 | MS.gene009642:CDS | 35.0% | |
| ! | AGAGATGATGAAGCTTTATC+GGG | + | chr5.3:60727160-60727179 | MS.gene009642:intron | 35.0% |
| ! | CATTCTTTGAAGACAATACC+TGG | + | chr5.3:60726710-60726729 | MS.gene009642:CDS | 35.0% |
| ! | GAATGCTCTGGTTTATGTAA+TGG | - | chr5.3:60724758-60724777 | None:intergenic | 35.0% |
| ! | GAGAGATGATGAAGCTTTAT+CGG | + | chr5.3:60727159-60727178 | MS.gene009642:intron | 35.0% |
| ! | GTTTTCCAGGTGTTTTTCAT+GGG | + | chr5.3:60725856-60725875 | MS.gene009642:intron | 35.0% |
| ! | TCAATTCCGAATTGTTTTCC+AGG | + | chr5.3:60725843-60725862 | MS.gene009642:intron | 35.0% |
| ! | TCTTTCAATGCTTTTCTTCG+TGG | + | chr5.3:60726155-60726174 | MS.gene009642:CDS | 35.0% |
| ! | TGTTTTCCAGGTGTTTTTCA+TGG | + | chr5.3:60725855-60725874 | MS.gene009642:intron | 35.0% |
| !! | CGCTTTAAAACATATTGTCC+AGG | - | chr5.3:60726731-60726750 | None:intergenic | 35.0% |
| !! | CTTTCTAAAGGTATTCGTAC+AGG | + | chr5.3:60726956-60726975 | MS.gene009642:CDS | 35.0% |
| !!! | CATCGTAAGAGTGTTTTGTT+CGG | + | chr5.3:60725696-60725715 | MS.gene009642:intron | 35.0% |
| !!! | GCTACTTTTGAAGACTTAGA+TGG | - | chr5.3:60726989-60727008 | None:intergenic | 35.0% |
| !!! | GCTAGTATTTTTTGGTCAGA+TGG | + | chr5.3:60725070-60725089 | MS.gene009642:CDS | 35.0% |
| !!! | TCGACATGTTTTGAAGATCT+TGG | + | chr5.3:60726661-60726680 | MS.gene009642:CDS | 35.0% |
| !!! | TTTTTCATGGGCTTTGTTCA+TGG | + | chr5.3:60725868-60725887 | MS.gene009642:CDS | 35.0% |
| AAGATCTTGGAGTTCTTAGG+TGG | + | chr5.3:60726674-60726693 | MS.gene009642:CDS | 40.0% | |
| AATCGAACAAGTGAATGGTC+TGG | - | chr5.3:60726191-60726210 | None:intergenic | 40.0% | |
| ACACTAGTTATCCAGAGTCA+TGG | - | chr5.3:60727517-60727536 | None:intergenic | 40.0% | |
| ACAGACGATTTATACAGACC+AGG | + | chr5.3:60725803-60725822 | MS.gene009642:intron | 40.0% | |
| ATGAGGAGGACACAACAAAA+GGG | + | chr5.3:60726402-60726421 | MS.gene009642:CDS | 40.0% | |
| CGAAAGAAAAACCTGAGGAA+AGG | + | chr5.3:60724645-60724664 | MS.gene009642:CDS | 40.0% | |
| GAAAGCGAAAGAAAAACCTG+AGG | + | chr5.3:60724640-60724659 | MS.gene009642:CDS | 40.0% | |
| GAGGAGTTGCTTCTTTCTAA+AGG | + | chr5.3:60726944-60726963 | MS.gene009642:CDS | 40.0% | |
| GATTTCAGCTTATCGACAGA+CGG | - | chr5.3:60726773-60726792 | None:intergenic | 40.0% | |
| TATGAGGAGGACACAACAAA+AGG | + | chr5.3:60726401-60726420 | MS.gene009642:CDS | 40.0% | |
| TCACACAAGACAAAATGCCT+AGG | - | chr5.3:60725419-60725438 | None:intergenic | 40.0% | |
| TCTTCAAAAGTAGCTGCTGT+TGG | + | chr5.3:60726995-60727014 | MS.gene009642:CDS | 40.0% | |
| TGGTCTGTATAAATCGTCTG+TGG | - | chr5.3:60725804-60725823 | None:intergenic | 40.0% | |
| TTGATATCGTTGTGCTTGAG+TGG | - | chr5.3:60726822-60726841 | None:intergenic | 40.0% | |
| TTTGAAGACTTAGATGGCGT+CGG | - | chr5.3:60726983-60727002 | None:intergenic | 40.0% | |
| ! | AGCCGCTTCTTTGACTTAAT+TGG | - | chr5.3:60727076-60727095 | None:intergenic | 40.0% |
| ! | AGGGGTGTACTTGTTTACAA+CGG | - | chr5.3:60726330-60726349 | None:intergenic | 40.0% |
| ! | CAGTACATTTTGAACTGCCT+AGG | + | chr5.3:60725263-60725282 | MS.gene009642:intron | 40.0% |
| ! | CTGTTGGTGAAACATCTGAT+GGG | + | chr5.3:60727011-60727030 | MS.gene009642:CDS | 40.0% |
| ! | GAGATGATGAAGCTTTATCG+GGG | + | chr5.3:60727161-60727180 | MS.gene009642:intron | 40.0% |
| ! | GCACAGAGAATCTTCCTTTT+CGG | + | chr5.3:60724897-60724916 | MS.gene009642:CDS | 40.0% |
| ! | GCCTTCCAATGTTGATGTTT+TGG | + | chr5.3:60726502-60726521 | MS.gene009642:intron | 40.0% |
| ! | GTCAAGTCACATTTTACAGC+TGG | + | chr5.3:60726107-60726126 | MS.gene009642:CDS | 40.0% |
| ! | TCATGCTGAGTTGGACTTTA+AGG | + | chr5.3:60726253-60726272 | MS.gene009642:CDS | 40.0% |
| ! | TGTTGGTGAAACATCTGATG+GGG | + | chr5.3:60727012-60727031 | MS.gene009642:CDS | 40.0% |
| ! | TTTAGGGATTTTCTCGCTTC+TGG | + | chr5.3:60725339-60725358 | MS.gene009642:intron | 40.0% |
| !! | GAAAGGGTTGGTTGTAAAGT+TGG | + | chr5.3:60724662-60724681 | MS.gene009642:CDS | 40.0% |
| !! | TATGCATTGGTCTTCAGCTT+GGG | + | chr5.3:60726085-60726104 | MS.gene009642:CDS | 40.0% |
| !!! | AGACAGCAGCTACTTTTGAT+TGG | + | chr5.3:60725739-60725758 | MS.gene009642:intron | 40.0% |
| AACACAATAACGCACTAGCC+TGG | - | chr5.3:60725824-60725843 | None:intergenic | 45.0% | |
| ATCCCAATAGTCAGCTGATG+CGG | + | chr5.3:60726303-60726322 | MS.gene009642:CDS | 45.0% | |
| CAAAGCCCATGAAAAACACC+TGG | - | chr5.3:60725864-60725883 | None:intergenic | 45.0% | |
| GAAAAACCTGAGGAAAGGGT+TGG | + | chr5.3:60724650-60724669 | MS.gene009642:CDS | 45.0% | |
| GAAGTTATGGGTCAAGGAGT+TGG | + | chr5.3:60724872-60724891 | MS.gene009642:CDS | 45.0% | |
| GAGGGATAATCATGCTGAGT+TGG | + | chr5.3:60726244-60726263 | MS.gene009642:CDS | 45.0% | |
| TGAAGCTGGAAAAAAGGCAG+AGG | + | chr5.3:60726925-60726944 | MS.gene009642:CDS | 45.0% | |
| TTACAACCAACCCTTTCCTC+AGG | - | chr5.3:60724659-60724678 | None:intergenic | 45.0% | |
| ! | CGTCAAAAAGAGATGGTGGT+TGG | + | chr5.3:60724953-60724972 | MS.gene009642:CDS | 45.0% |
| ! | GCTGTTGGTGAAACATCTGA+TGG | + | chr5.3:60727010-60727029 | MS.gene009642:CDS | 45.0% |
| ! | TCTTTGAACTTTGGTGCGGT+GGG | - | chr5.3:60727043-60727062 | None:intergenic | 45.0% |
| ! | TGAAGCTTTATCGGGGATTG+TGG | + | chr5.3:60727168-60727187 | MS.gene009642:intron | 45.0% |
| ! | TTCTTTGAACTTTGGTGCGG+TGG | - | chr5.3:60727044-60727063 | None:intergenic | 45.0% |
| !! | GTATGCATTGGTCTTCAGCT+TGG | + | chr5.3:60726084-60726103 | MS.gene009642:CDS | 45.0% |
| CTAAGGTAACGCGAATGCTC+TGG | - | chr5.3:60724770-60724789 | None:intergenic | 50.0% | |
| GAAGGCCTACCTCAGACTTT+AGG | + | chr5.3:60726036-60726055 | MS.gene009642:CDS | 50.0% | |
| GACAAGCCACCTAAAGTCTG+AGG | - | chr5.3:60726048-60726067 | None:intergenic | 50.0% | |
| GACCGCATCAGCTGACTATT+GGG | - | chr5.3:60726308-60726327 | None:intergenic | 50.0% | |
| GTTATGGGTCAAGGAGTTGG+AGG | + | chr5.3:60724875-60724894 | MS.gene009642:CDS | 50.0% | |
| ! | AGCCACCTAAAGTCTGAGGT+AGG | - | chr5.3:60726044-60726063 | None:intergenic | 50.0% |
| ! | TCTGCTGTTGGCCTGTTGTT+AGG | - | chr5.3:60724596-60724615 | None:intergenic | 50.0% |
| !! | TGGGCTTTGTTCATGGCACA+TGG | + | chr5.3:60725875-60725894 | MS.gene009642:CDS | 50.0% |
| CTCGACGGTGTTCTTGAAGC+TGG | + | chr5.3:60726911-60726930 | MS.gene009642:CDS | 55.0% | |
| GGACCGCATCAGCTGACTAT+TGG | - | chr5.3:60726309-60726328 | None:intergenic | 55.0% | |
| GGCCTACCTCAGACTTTAGG+TGG | + | chr5.3:60726039-60726058 | MS.gene009642:CDS | 55.0% | |
| !! | ACCAGTGGACTGTCTGCTGT+TGG | - | chr5.3:60724608-60724627 | None:intergenic | 55.0% |
| GCCAACAGCAGACAGTCCAC+TGG | + | chr5.3:60724604-60724623 | MS.gene009642:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 60724488 | 60727723 | 60724488 | ID=MS.gene009642 |
| chr5.3 | mRNA | 60724488 | 60727723 | 60724488 | ID=MS.gene009642.t1;Parent=MS.gene009642 |
| chr5.3 | exon | 60724488 | 60725178 | 60724488 | ID=MS.gene009642.t1.exon1;Parent=MS.gene009642.t1 |
| chr5.3 | CDS | 60724488 | 60725178 | 60724488 | ID=cds.MS.gene009642.t1;Parent=MS.gene009642.t1 |
| chr5.3 | exon | 60725865 | 60726339 | 60725865 | ID=MS.gene009642.t1.exon2;Parent=MS.gene009642.t1 |
| chr5.3 | CDS | 60725865 | 60726339 | 60725865 | ID=cds.MS.gene009642.t1;Parent=MS.gene009642.t1 |
| chr5.3 | exon | 60726373 | 60726461 | 60726373 | ID=MS.gene009642.t1.exon3;Parent=MS.gene009642.t1 |
| chr5.3 | CDS | 60726373 | 60726461 | 60726373 | ID=cds.MS.gene009642.t1;Parent=MS.gene009642.t1 |
| chr5.3 | exon | 60726531 | 60727100 | 60726531 | ID=MS.gene009642.t1.exon4;Parent=MS.gene009642.t1 |
| chr5.3 | CDS | 60726531 | 60727100 | 60726531 | ID=cds.MS.gene009642.t1;Parent=MS.gene009642.t1 |
| chr5.3 | exon | 60727641 | 60727723 | 60727641 | ID=MS.gene009642.t1.exon5;Parent=MS.gene009642.t1 |
| chr5.3 | CDS | 60727641 | 60727723 | 60727641 | ID=cds.MS.gene009642.t1;Parent=MS.gene009642.t1 |
| Gene Sequence |
| Protein sequence |
