AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene009694

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene009694.t1 MTR_6g051425 30.182 275 175 6 50 311 19 289 3.56e-35 137
MS.gene009694.t1 MTR_0856s0010 43.023 172 84 4 3 173 2 160 3.04e-33 125
MS.gene009694.t1 MTR_4g035820 30.405 296 180 12 9 288 39 324 4.92e-24 108
MS.gene009694.t1 MTR_0558s0020 25.260 289 182 8 30 284 8 296 7.94e-22 97.1
MS.gene009694.t1 MTR_1g070355 28.936 235 152 7 54 278 80 309 1.40e-20 97.1
MS.gene009694.t1 MTR_7g446060 51.220 82 40 0 130 211 7 88 5.84e-20 87.0
MS.gene009694.t1 MTR_3g450850 26.829 287 191 8 2 272 3 286 1.45e-17 85.5
MS.gene009694.t1 MTR_8g446020 24.576 236 157 4 52 284 39 256 1.67e-17 83.6
MS.gene009694.t1 MTR_7g446480 31.977 172 116 1 122 292 143 314 4.59e-17 83.6
MS.gene009694.t1 MTR_6g022070 28.966 145 99 1 338 482 1 141 5.47e-17 83.6
MS.gene009694.t1 MTR_1g008290 32.331 133 88 1 108 240 14 144 9.54e-17 78.2
MS.gene009694.t1 MTR_7g446510 32.530 166 111 1 128 292 164 329 1.86e-16 82.0
MS.gene009694.t1 MTR_7g446520 25.847 236 162 2 52 286 92 315 2.32e-16 81.6
MS.gene009694.t1 MTR_7g115320 61.111 54 18 1 137 190 9 59 9.01e-15 70.9
MS.gene009694.t1 MTR_1g083640 23.162 272 175 8 18 255 11 282 2.77e-14 74.7
MS.gene009694.t1 MTR_1g019850 30.303 165 98 6 17 175 43 196 3.59e-14 73.2
MS.gene009694.t1 MTR_3g012160 41.975 81 46 1 193 273 14 93 1.33e-13 67.4
MS.gene009694.t1 MTR_5g076070 23.552 259 185 7 23 272 28 282 3.31e-13 71.2
MS.gene009694.t1 MTR_5g023310 28.025 157 44 3 179 334 16 104 1.36e-12 65.1
MS.gene009694.t1 MTR_6g090505 25.843 178 129 2 109 283 53 230 1.76e-12 70.1
MS.gene009694.t1 MTR_0402s0040 25.000 180 130 3 47 221 25 204 3.95e-11 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene009694.t1 AT4G15090 31.744 734 460 13 48 771 51 753 4.59e-123 389
MS.gene009694.t1 AT4G15090 31.744 734 460 13 48 771 51 753 4.59e-123 389
MS.gene009694.t1 AT4G15090 31.744 734 460 13 48 771 51 753 4.59e-123 389
MS.gene009694.t1 AT4G15090 31.744 734 460 13 48 771 51 753 4.59e-123 389
MS.gene009694.t1 AT4G15090 31.744 734 460 13 48 771 51 753 4.59e-123 389
MS.gene009694.t1 AT4G38180 32.720 706 428 15 8 684 38 725 1.07e-119 379
MS.gene009694.t1 AT3G22170 29.782 779 471 15 18 770 35 763 3.62e-111 358
MS.gene009694.t1 AT3G22170 29.782 779 471 15 18 770 35 763 3.62e-111 358
MS.gene009694.t1 AT1G76320 32.198 587 374 9 52 633 1 568 5.31e-105 337
MS.gene009694.t1 AT1G76320 32.198 587 374 9 52 633 1 568 2.27e-104 337
MS.gene009694.t1 AT1G76320 32.198 587 374 9 52 633 1 568 2.29e-104 337
MS.gene009694.t1 AT1G76320 32.198 587 374 9 52 633 1 568 2.29e-104 337
MS.gene009694.t1 AT1G52520 32.538 587 371 12 33 607 66 639 5.07e-104 335
MS.gene009694.t1 AT2G27110 31.803 610 363 14 48 645 49 617 4.88e-94 313
MS.gene009694.t1 AT2G27110 31.803 610 363 14 48 645 49 617 4.88e-94 313
MS.gene009694.t1 AT3G06250 33.393 563 323 14 48 606 190 704 8.81e-93 307
MS.gene009694.t1 AT3G06250 33.393 563 323 14 48 606 190 704 8.81e-93 307
MS.gene009694.t1 AT3G06250 33.393 563 323 14 48 606 190 704 8.81e-93 307
MS.gene009694.t1 AT1G80010 32.392 602 359 13 39 610 82 665 9.83e-91 301
MS.gene009694.t1 AT2G27110 34.937 478 288 9 172 645 14 472 3.06e-89 296
MS.gene009694.t1 AT5G18960 32.060 602 354 16 28 622 192 745 4.44e-86 290
MS.gene009694.t1 AT5G18960 32.060 602 354 16 28 622 192 745 4.44e-86 290
MS.gene009694.t1 AT2G32250 34.312 443 270 6 224 658 176 605 2.78e-82 279
MS.gene009694.t1 AT2G32250 34.312 443 270 6 224 658 135 564 2.86e-82 279
MS.gene009694.t1 AT2G32250 34.312 443 270 6 224 658 135 564 3.46e-82 279
MS.gene009694.t1 AT2G32250 34.312 443 270 6 224 658 176 605 5.83e-82 279
MS.gene009694.t1 AT2G32250 34.312 443 270 6 224 658 176 605 5.83e-82 279
MS.gene009694.t1 AT2G32250 34.312 443 270 6 224 658 176 605 6.10e-82 279
MS.gene009694.t1 AT2G32250 34.312 443 270 6 224 658 176 605 6.10e-82 279
MS.gene009694.t1 AT2G32250 34.312 443 270 6 224 658 176 605 6.10e-82 279
MS.gene009694.t1 AT4G19990 30.198 606 353 12 51 632 24 583 2.43e-79 271
MS.gene009694.t1 AT4G19990 30.198 606 353 12 51 632 24 583 2.43e-79 271
MS.gene009694.t1 AT4G19990 30.198 606 353 12 51 632 24 583 2.69e-79 270
MS.gene009694.t1 AT4G19990 30.198 606 353 12 51 632 38 597 3.92e-79 270
MS.gene009694.t1 AT4G19990 30.198 606 353 12 51 632 24 583 5.08e-79 270
MS.gene009694.t1 AT4G19990 30.198 606 353 12 51 632 24 583 5.08e-79 270
MS.gene009694.t1 AT4G38170 34.021 388 245 4 221 606 21 399 2.00e-76 257
MS.gene009694.t1 AT4G19990 30.983 539 318 10 104 632 32 526 3.16e-75 258
MS.gene009694.t1 AT1G10240 27.055 584 383 15 42 603 42 604 9.72e-63 223
MS.gene009694.t1 AT1G10240 27.055 584 383 15 42 603 42 604 9.72e-63 223
MS.gene009694.t1 AT5G28530 27.946 594 364 13 46 603 53 618 1.49e-61 220
MS.gene009694.t1 AT5G28530 27.441 594 363 12 46 603 53 614 1.33e-60 217
MS.gene009694.t1 AT5G28530 27.441 594 363 12 46 603 53 614 1.33e-60 217
MS.gene009694.t1 AT5G28530 26.829 328 202 7 290 603 252 555 2.02e-27 118
MS.gene009694.t1 AT5G28530 28.324 173 107 5 46 205 53 221 7.88e-11 66.2
MS.gene009694.t1 AT5G28530 25.915 328 201 6 290 603 252 551 1.24e-26 116
MS.gene009694.t1 AT5G28530 28.324 173 107 5 46 205 53 221 8.92e-11 65.9

Find 155 sgRNAs with CRISPR-Local

Find 195 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGTGTTGACGTTTCGGATTC+CGG 0.204382 5.2:+62860584 MS.gene009694:CDS
TCTTTCCCGCTCTTCGAAAA+TGG 0.249066 5.2:-62861746 None:intergenic
GATTGCAAACCCTTGTTTCA+TGG 0.302647 5.2:-62860711 None:intergenic
AAGACCGCAACCTAGTAAAA+TGG 0.321194 5.2:-62861392 None:intergenic
GTGTTGACGTTTCGGATTCC+GGG 0.344560 5.2:+62860585 MS.gene009694:CDS
GGCTATGCAGAATGCAATTC+AGG 0.347065 5.2:+62861516 MS.gene009694:CDS
TTGCTTTAAAGAAGGGTCTA+TGG 0.361166 5.2:+62860882 MS.gene009694:CDS
TGCGGCTCGTGTTGACGTTT+CGG 0.362249 5.2:+62860577 MS.gene009694:CDS
ATGCCATTTGCCCCGTTTGT+TGG 0.369173 5.2:+62861349 MS.gene009694:CDS
ACTAAATCACGGTTGTTTGC+TGG 0.375082 5.2:+62860950 MS.gene009694:CDS
AGTATTGTGTTGATTTCAAC+GGG 0.389824 5.2:+62862160 MS.gene009694:CDS
CACCACCTATGCCTAGTATT+AGG 0.393202 5.2:-62861547 None:intergenic
GTACACCCATGACAAGTATA+TGG 0.398379 5.2:+62862014 MS.gene009694:CDS
GGATTAAGAATTGGTTGATC+AGG 0.405554 5.2:-62862582 None:intergenic
CTAGGCATAGGTGGTGTCTA+TGG 0.405638 5.2:+62861554 MS.gene009694:CDS
ACTTCGACAACCGAAACAAT+TGG 0.413255 5.2:-62862702 None:intergenic
AAAGGATGATCGATCAATAT+AGG 0.415391 5.2:-62860524 None:intergenic
ATTGTGTGTATGATTCTCTT+CGG 0.417625 5.2:+62861650 MS.gene009694:CDS
TTGTGTGTATGATTCTCTTC+GGG 0.423647 5.2:+62861651 MS.gene009694:CDS
ACATTACTTCCTATGTCTGA+TGG 0.423977 5.2:+62862834 MS.gene009694:CDS
CCTCTGTGTTGTTGACATTC+CGG 0.424793 5.2:-62861803 None:intergenic
GATGATTGACACCAACAAAC+GGG 0.432575 5.2:-62861360 None:intergenic
TTGGTGGTATGTTTGATTCA+TGG 0.433399 5.2:-62860808 None:intergenic
ACACCAACAAACGGGGCAAA+TGG 0.438957 5.2:-62861352 None:intergenic
GCAAACAACCGTGATTTAGT+TGG 0.439208 5.2:-62860947 None:intergenic
ATGGTTTGGGTGAAAATGAT+TGG 0.445440 5.2:+62861716 MS.gene009694:CDS
CATTACTTCCTATGTCTGAT+GGG 0.447968 5.2:+62862835 MS.gene009694:CDS
TGATGATTGACACCAACAAA+CGG 0.449717 5.2:-62861361 None:intergenic
CCATCAGCTAGCTCTCCGTC+AGG 0.451558 5.2:-62860554 None:intergenic
ACACAATACTTAGTTTCGTT+CGG 0.457073 5.2:-62862147 None:intergenic
GGCTAAGGTGTATGTCTTCG+AGG 0.457503 5.2:+62861461 MS.gene009694:CDS
TATCCTACTTTGCTAGAATG+AGG 0.459924 5.2:+62861173 MS.gene009694:CDS
AAAACTAGAAACTCTAAGAA+AGG 0.460138 5.2:+62860734 MS.gene009694:CDS
AAACTAGAAACTCTAAGAAA+GGG 0.460938 5.2:+62860735 MS.gene009694:CDS
ACTCCAAGACAAGGCTGAAA+AGG 0.462412 5.2:+62861909 MS.gene009694:CDS
CAAATGGTCTAGCAAGAAGT+TGG 0.463702 5.2:+62862479 MS.gene009694:CDS
AGGTTGTGTTTCCTAATACT+AGG 0.465284 5.2:+62861536 MS.gene009694:CDS
GCAAAAGAAAGACACCTTCT+CGG 0.472868 5.2:+62861124 MS.gene009694:CDS
GATAACGGTTGCTTTAAAGA+AGG 0.473052 5.2:+62860874 MS.gene009694:CDS
AACATCACCAAAGTATTCAT+AGG 0.473828 5.2:-62861287 None:intergenic
CCACACATAGAAAGATTTGA+AGG 0.478166 5.2:+62862375 MS.gene009694:CDS
GCCACATTGTGGTGTGGGAG+GGG 0.479684 5.2:+62862518 MS.gene009694:CDS
GAGCAATCAAGTTTCTTCGT+TGG 0.480101 5.2:-62860845 None:intergenic
CACTTATGCTCGATGGCTGA+TGG 0.482201 5.2:+62860497 None:intergenic
TCGGGAAGGAAGGAGATGGC+AGG 0.482875 5.2:+62861143 MS.gene009694:CDS
ATTTGTTGTTTCAAAGGTCC+CGG 0.485747 5.2:-62860603 None:intergenic
TTGAAATTGTCTCTCGATTG+TGG 0.489013 5.2:-62861986 None:intergenic
GACAGCATTTGTTGTTTCAA+AGG 0.491833 5.2:-62860609 None:intergenic
CTTGTTTCATGGCATATTCA+CGG 0.492232 5.2:-62860700 None:intergenic
AAAACCACTAGTTGACTGTT+GGG 0.492621 5.2:-62862895 None:intergenic
TCCGTTAAAAGTACCACGTA+AGG 0.492742 5.2:+62862602 MS.gene009694:CDS
GACAATACTCTCCTCTAAAA+CGG 0.498094 5.2:-62862115 None:intergenic
CGTGAATATGCCATGAAACA+AGG 0.498225 5.2:+62860701 MS.gene009694:CDS
TGTATGAAGAAATGATCAAA+TGG 0.501577 5.2:+62862463 MS.gene009694:CDS
TTAAAAGACATACCGATAGT+AGG 0.501742 5.2:-62860650 None:intergenic
TTTCGAAGAGCGGGAAAGAT+GGG 0.502201 5.2:+62861750 MS.gene009694:CDS
GTTGGATTCGTCTTCAAAGT+TGG 0.502236 5.2:-62860827 None:intergenic
ATACTTGTCATGGGTGTACT+CGG 0.502362 5.2:-62862010 None:intergenic
CATCTCCTTCCTTCCCGAGA+AGG 0.502837 5.2:-62861138 None:intergenic
TTACCTGGTTGTTCGAAACA+TGG 0.503284 5.2:+62861440 MS.gene009694:CDS
TGGTCATCTTAGAGTGAAAG+AGG 0.503540 5.2:+62862260 MS.gene009694:CDS
TATGTCTTCGAGGCCTCCAA+TGG 0.508338 5.2:+62861471 MS.gene009694:CDS
TCGGTTACAATTCCCATTGG+AGG 0.511504 5.2:-62861484 None:intergenic
TCTGATGGGTTTCAAGCGTC+CGG 0.512219 5.2:+62862849 MS.gene009694:CDS
TTACGAAAATCTAACATTTG+TGG 0.512305 5.2:+62861078 MS.gene009694:CDS
AAACGATCAGGCAGGTGTAC+GGG 0.512319 5.2:+62861015 MS.gene009694:CDS
CGTTCCATGGTATGTGATGC+CGG 0.512631 5.2:+62861052 MS.gene009694:CDS
GAGAGATGTCAGAAACTTTG+TGG 0.514693 5.2:+62861102 MS.gene009694:CDS
TCTGGGCTGATGCACGTAGT+AGG 0.516810 5.2:+62861260 MS.gene009694:CDS
CAAAAGAAAGACACCTTCTC+GGG 0.517286 5.2:+62861125 MS.gene009694:CDS
GTATCTCCATATACTTGTCA+TGG 0.517305 5.2:-62862020 None:intergenic
CCTTCAAATCTTTCTATGTG+TGG 0.521556 5.2:-62862375 None:intergenic
ATAACGGTTGCTTTAAAGAA+GGG 0.522275 5.2:+62860875 MS.gene009694:CDS
TTCCCTCATTCTAGCAAAGT+AGG 0.524536 5.2:-62861176 None:intergenic
AAATGGTCTAGCAAGAAGTT+GGG 0.529100 5.2:+62862480 MS.gene009694:CDS
GAACAAAAGTTTCCGTTCCA+TGG 0.529264 5.2:+62861039 MS.gene009694:CDS
GGATTCGTCTTCAAAGTTGG+TGG 0.530111 5.2:-62860824 None:intergenic
TAAACGATCAGGCAGGTGTA+CGG 0.533293 5.2:+62861014 MS.gene009694:CDS
AAGTATTGTGTTGATTTCAA+CGG 0.536214 5.2:+62862159 MS.gene009694:CDS
TAAAACCACTAGTTGACTGT+TGG 0.536849 5.2:-62862896 None:intergenic
ATCCTACTTTGCTAGAATGA+GGG 0.537508 5.2:+62861174 MS.gene009694:CDS
CGCAACCTAGTAAAATGGAT+TGG 0.539669 5.2:-62861387 None:intergenic
TGATCGGTTACAATTCCCAT+TGG 0.541217 5.2:-62861487 None:intergenic
CATCAGCTAGCTCTCCGTCA+GGG 0.541329 5.2:-62860553 None:intergenic
TTTGTTGGTGTCAATCATCA+TGG 0.542180 5.2:+62861364 MS.gene009694:CDS
CTGCATAGCCTTGCACTGAT+CGG 0.542185 5.2:-62861503 None:intergenic
CTATGAGATTGACATGGACG+AGG 0.547341 5.2:+62861216 MS.gene009694:CDS
TGATTGCTCAGCTAAGATAA+CGG 0.550952 5.2:+62860859 MS.gene009694:CDS
GATAAATTCACGCCTACTAT+CGG 0.551302 5.2:+62860638 MS.gene009694:CDS
TGTTTGCTGTTTGAGTTCAG+AGG 0.551367 5.2:+62862207 MS.gene009694:CDS
TATCTCCATATACTTGTCAT+GGG 0.551454 5.2:-62862019 None:intergenic
ATTCTAACTTGTGCAAGAGA+AGG 0.552020 5.2:+62860782 MS.gene009694:CDS
AGGTCTGCCTATGAATACTT+TGG 0.552277 5.2:+62861280 MS.gene009694:CDS
AGACACCTTCTCGGGAAGGA+AGG 0.553011 5.2:+62861133 MS.gene009694:CDS
TGTTTCGAACAACCAGGTAA+AGG 0.558836 5.2:-62861437 None:intergenic
AACTCTAAGAAAGGGGCCGA+TGG 0.560180 5.2:+62860743 MS.gene009694:CDS
CTAAATTTATCTTGCCACGA+TGG 0.563368 5.2:+62862289 MS.gene009694:CDS
GAGATACAAGTAGAATTTCG+TGG 0.566723 5.2:+62862036 MS.gene009694:CDS
AGCCACATTGTGGTGTGGGA+GGG 0.569772 5.2:+62862517 MS.gene009694:CDS
ATGTCTTCGAGGCCTCCAAT+GGG 0.571048 5.2:+62861472 MS.gene009694:CDS
TGTTTCCTAATACTAGGCAT+AGG 0.571109 5.2:+62861542 MS.gene009694:CDS
CAGCCACATTGTGGTGTGGG+AGG 0.575417 5.2:+62862516 MS.gene009694:CDS
TCTCGAAGGTGTGACTACAT+TGG 0.577648 5.2:+62862074 MS.gene009694:CDS
ATCAGCTAGCTCTCCGTCAG+GGG 0.582853 5.2:-62860552 None:intergenic
ATACAGCCACATTGTGGTGT+GGG 0.585169 5.2:+62862513 MS.gene009694:CDS
TCAGACATAGGAAGTAATGT+AGG 0.589454 5.2:-62862831 None:intergenic
CATTTCTTCATACAAATCAG+AGG 0.596809 5.2:-62862454 None:intergenic
GCTTGAAACCCATCAGACAT+AGG 0.602294 5.2:-62862843 None:intergenic
GTGAATATGCCATGAAACAA+GGG 0.602322 5.2:+62860702 MS.gene009694:CDS
AAGATAACAAGTCCTTTACC+TGG 0.605756 5.2:+62861425 MS.gene009694:CDS
GAAGTAGTTAAGCGTATCAC+CGG 0.605920 5.2:-62862868 None:intergenic
CGACAACGCACTCCAAGACA+AGG 0.606607 5.2:+62861900 MS.gene009694:CDS
AGATACAAGTAGAATTTCGT+GGG 0.607840 5.2:+62862037 MS.gene009694:CDS
AGAAAGACACCTTCTCGGGA+AGG 0.609091 5.2:+62861129 MS.gene009694:CDS
GACAACCGACGATTAGTTCG+AGG 0.611005 5.2:-62862630 None:intergenic
TGCATCAATGAGCAAAGATG+TGG 0.611914 5.2:+62862929 MS.gene009694:CDS
ACCACCGGCATCACATACCA+TGG 0.613048 5.2:-62861056 None:intergenic
AAATGCAACTGTTATCTCGA+AGG 0.615193 5.2:+62862060 MS.gene009694:CDS
TTCCTAATACTAGGCATAGG+TGG 0.615209 5.2:+62861545 MS.gene009694:CDS
CAAGCACAATCATTCCATGC+GGG 0.616971 5.2:+62861956 MS.gene009694:CDS
GGTTGTTCGAAACATGGCTA+AGG 0.617470 5.2:+62861446 MS.gene009694:CDS
CGTGGCAAGATAAATTTAGA+CGG 0.619992 5.2:-62862285 None:intergenic
AATTGTAACCGATCAGTGCA+AGG 0.620761 5.2:+62861495 MS.gene009694:CDS
CGGGAAGGAAGGAGATGGCA+GGG 0.622349 5.2:+62861144 MS.gene009694:CDS
TCATCCCAACAGTCAACTAG+TGG 0.623204 5.2:+62862891 MS.gene009694:CDS
CCTGACGGAGAGCTAGCTGA+TGG 0.623440 5.2:+62860554 MS.gene009694:CDS
CCGTTAAAAGTACCACGTAA+GGG 0.624486 5.2:+62862603 MS.gene009694:CDS
CGGCATCACATACCATGGAA+CGG 0.625469 5.2:-62861051 None:intergenic
TAGCCATGTTTCGAACAACC+AGG 0.627145 5.2:-62861443 None:intergenic
ATTGTGGAATTTGACCCGCA+TGG 0.627292 5.2:-62861970 None:intergenic
GTTCGAGGACGTCCCTTACG+TGG 0.628497 5.2:-62862615 None:intergenic
CTTCTCGGGAAGGAAGGAGA+TGG 0.631777 5.2:+62861139 MS.gene009694:CDS
AACTAGAAACTCTAAGAAAG+GGG 0.633083 5.2:+62860736 MS.gene009694:CDS
GGATCATAGCTTAAAGACGA+TGG 0.633198 5.2:+62862539 MS.gene009694:CDS
AAAGGATACGCACAATACAA+AGG 0.637659 5.2:+62861607 MS.gene009694:CDS
CAAGGCTGAAAAGGAATACG+AGG 0.638254 5.2:+62861918 MS.gene009694:CDS
GGATGATCGATCAATATAGG+AGG 0.639611 5.2:-62860521 None:intergenic
TACAAATCAGAGGTTTGACT+AGG 0.642589 5.2:-62862444 None:intergenic
AGATAAGTCCAACTAAATCA+CGG 0.645312 5.2:+62860939 MS.gene009694:CDS
ATGAGTATACAGCCACATTG+TGG 0.651653 5.2:+62862507 MS.gene009694:CDS
TCAGCTAGCTCTCCGTCAGG+GGG 0.662037 5.2:-62860551 None:intergenic
TTATGAAATTGCAGAATGTG+CGG 0.662542 5.2:+62862413 MS.gene009694:CDS
CGGAGAGCTAGCTGATGGTG+CGG 0.662675 5.2:+62860559 MS.gene009694:CDS
ATGATTGACACCAACAAACG+GGG 0.665562 5.2:-62861359 None:intergenic
TTAGAGGAGAGTATTGTCTG+TGG 0.669312 5.2:+62862120 MS.gene009694:CDS
TATACAGCCACATTGTGGTG+TGG 0.671203 5.2:+62862512 MS.gene009694:CDS
GACGTCCTCGAACTAATCGT+CGG 0.680634 5.2:+62862625 MS.gene009694:CDS
TCATAGCTTAAAGACGATGG+AGG 0.690980 5.2:+62862542 MS.gene009694:CDS
ATACTTGTTTGTCAAGTACG+TGG 0.696002 5.2:-62861323 None:intergenic
TCAAGCACAATCATTCCATG+CGG 0.697666 5.2:+62861955 MS.gene009694:CDS
TCCCCTCCCACACCACAATG+TGG 0.710147 5.2:-62862519 None:intergenic
TCCATGGTATGTGATGCCGG+TGG 0.764195 5.2:+62861055 MS.gene009694:CDS
CCGGAATGTCAACAACACAG+AGG 0.797075 5.2:+62861803 MS.gene009694:CDS
AGATTGATATGCATGCACAG+CGG 0.798983 5.2:+62860981 MS.gene009694:CDS
GTATTGTGTTGATTTCAACG+GGG 0.841514 5.2:+62862161 MS.gene009694:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATTTAAAAAATGATTTCT+GGG + chr5.2:62861780-62861799 MS.gene009694:CDS 10.0%
!!! AAATCATTTTTTAAATAACA+TGG - chr5.2:62861778-62861797 None:intergenic 10.0%
!! AATGTAATCACAATAATAAT+AGG - chr5.2:62862741-62862760 None:intergenic 15.0%
!! GTTATTTAAAAAATGATTTC+TGG + chr5.2:62861779-62861798 MS.gene009694:CDS 15.0%
!! AAGAAAAAAACCAATTGTTT+CGG + chr5.2:62862692-62862711 MS.gene009694:CDS 20.0%
!! ACAACATTCATTGAAAAATA+TGG + chr5.2:62861697-62861716 MS.gene009694:CDS 20.0%
!! ATTCATTGAAAAATATGGTT+TGG + chr5.2:62861702-62861721 MS.gene009694:CDS 20.0%
!! TTCATTGAAAAATATGGTTT+GGG + chr5.2:62861703-62861722 MS.gene009694:CDS 20.0%
! AAAATTGCCGAAAAATTGAA+AGG + chr5.2:62861589-62861608 MS.gene009694:CDS 25.0%
! TGTATGAAGAAATGATCAAA+TGG + chr5.2:62862463-62862482 MS.gene009694:CDS 25.0%
! TTACGAAAATCTAACATTTG+TGG + chr5.2:62861078-62861097 MS.gene009694:CDS 25.0%
!! AAAACTAGAAACTCTAAGAA+AGG + chr5.2:62860734-62860753 MS.gene009694:CDS 25.0%
!! AAACTAGAAACTCTAAGAAA+GGG + chr5.2:62860735-62860754 MS.gene009694:CDS 25.0%
!! TATCGGTATGTCTTTTAAAT+CGG + chr5.2:62860655-62860674 MS.gene009694:CDS 25.0%
!!! AAGTATTGTGTTGATTTCAA+CGG + chr5.2:62862159-62862178 MS.gene009694:CDS 25.0%
!!! ACTTTTAACGGATTAAGAAT+TGG - chr5.2:62862594-62862613 None:intergenic 25.0%
!!! GAAATATTTTAACATGCCAT+CGG - chr5.2:62860762-62860781 None:intergenic 25.0%
!!! TTTTTTCACAATCTTTTCAG+TGG - chr5.2:62862658-62862677 None:intergenic 25.0%
AAAGGATGATCGATCAATAT+AGG - chr5.2:62860527-62860546 None:intergenic 30.0%
ACACAATACTTAGTTTCGTT+CGG - chr5.2:62862150-62862169 None:intergenic 30.0%
AGATAAGTCCAACTAAATCA+CGG + chr5.2:62860939-62860958 MS.gene009694:CDS 30.0%
AGATACAAGTAGAATTTCGT+GGG + chr5.2:62862037-62862056 MS.gene009694:CDS 30.0%
ATTGTGTGTATGATTCTCTT+CGG + chr5.2:62861650-62861669 MS.gene009694:CDS 30.0%
CATTTCTTCATACAAATCAG+AGG - chr5.2:62862457-62862476 None:intergenic 30.0%
TATCTCCATATACTTGTCAT+GGG - chr5.2:62862022-62862041 None:intergenic 30.0%
TTAAAAGACATACCGATAGT+AGG - chr5.2:62860653-62860672 None:intergenic 30.0%
TTATGAAATTGCAGAATGTG+CGG + chr5.2:62862413-62862432 MS.gene009694:CDS 30.0%
! AACATCACCAAAGTATTCAT+AGG - chr5.2:62861290-62861309 None:intergenic 30.0%
! AACTAGAAACTCTAAGAAAG+GGG + chr5.2:62860736-62860755 MS.gene009694:CDS 30.0%
! CTTTTTCTATGAGATTGACA+TGG + chr5.2:62861210-62861229 MS.gene009694:CDS 30.0%
! TCATGTGCAGAATATTTTCT+GGG + chr5.2:62861243-62861262 MS.gene009694:CDS 30.0%
! TGCGTATCCTTTCAATTTTT+CGG - chr5.2:62861599-62861618 None:intergenic 30.0%
! TTAAAAAATGATTTCTGGGC+CGG + chr5.2:62861784-62861803 MS.gene009694:CDS 30.0%
! TTCATGTGCAGAATATTTTC+TGG + chr5.2:62861242-62861261 MS.gene009694:CDS 30.0%
!! AGTATTGTGTTGATTTCAAC+GGG + chr5.2:62862160-62862179 MS.gene009694:CDS 30.0%
!! ATAACGGTTGCTTTAAAGAA+GGG + chr5.2:62860875-62860894 MS.gene009694:CDS 30.0%
!! GACAATTTTGATAAACGATC+AGG + chr5.2:62861003-62861022 MS.gene009694:CDS 30.0%
!!! AGTATGAATGCTTTTTTCGA+TGG + chr5.2:62861832-62861851 MS.gene009694:CDS 30.0%
!!! TATGTGTGGTTGTAGTTTTT+TGG - chr5.2:62862364-62862383 None:intergenic 30.0%
AAAACCACTAGTTGACTGTT+GGG - chr5.2:62862898-62862917 None:intergenic 35.0%
AAAGGATACGCACAATACAA+AGG + chr5.2:62861607-62861626 MS.gene009694:CDS 35.0%
AAATGCAACTGTTATCTCGA+AGG + chr5.2:62862060-62862079 MS.gene009694:CDS 35.0%
AAATGGTCTAGCAAGAAGTT+GGG + chr5.2:62862480-62862499 MS.gene009694:CDS 35.0%
AAGATAACAAGTCCTTTACC+TGG + chr5.2:62861425-62861444 MS.gene009694:CDS 35.0%
ACATTACTTCCTATGTCTGA+TGG + chr5.2:62862834-62862853 MS.gene009694:CDS 35.0%
AGGTTGTGTTTCCTAATACT+AGG + chr5.2:62861536-62861555 MS.gene009694:CDS 35.0%
ATACTTGTTTGTCAAGTACG+TGG - chr5.2:62861326-62861345 None:intergenic 35.0%
ATCCTACTTTGCTAGAATGA+GGG + chr5.2:62861174-62861193 MS.gene009694:CDS 35.0%
CATTACTTCCTATGTCTGAT+GGG + chr5.2:62862835-62862854 MS.gene009694:CDS 35.0%
CCACACATAGAAAGATTTGA+AGG + chr5.2:62862375-62862394 MS.gene009694:CDS 35.0%
CCTTCAAATCTTTCTATGTG+TGG - chr5.2:62862378-62862397 None:intergenic 35.0%
CGTGGCAAGATAAATTTAGA+CGG - chr5.2:62862288-62862307 None:intergenic 35.0%
CTAAATTTATCTTGCCACGA+TGG + chr5.2:62862289-62862308 MS.gene009694:CDS 35.0%
CTTGTTTCATGGCATATTCA+CGG - chr5.2:62860703-62860722 None:intergenic 35.0%
GAGATACAAGTAGAATTTCG+TGG + chr5.2:62862036-62862055 MS.gene009694:CDS 35.0%
GATAAATTCACGCCTACTAT+CGG + chr5.2:62860638-62860657 MS.gene009694:CDS 35.0%
GGATTAAGAATTGGTTGATC+AGG - chr5.2:62862585-62862604 None:intergenic 35.0%
GTATCTCCATATACTTGTCA+TGG - chr5.2:62862023-62862042 None:intergenic 35.0%
GTGAATATGCCATGAAACAA+GGG + chr5.2:62860702-62860721 MS.gene009694:CDS 35.0%
TAAAACCACTAGTTGACTGT+TGG - chr5.2:62862899-62862918 None:intergenic 35.0%
TACAAATCAGAGGTTTGACT+AGG - chr5.2:62862447-62862466 None:intergenic 35.0%
TATCCTACTTTGCTAGAATG+AGG + chr5.2:62861173-62861192 MS.gene009694:CDS 35.0%
TCAGACATAGGAAGTAATGT+AGG - chr5.2:62862834-62862853 None:intergenic 35.0%
TGATGATTGACACCAACAAA+CGG - chr5.2:62861364-62861383 None:intergenic 35.0%
TGATTGCTCAGCTAAGATAA+CGG + chr5.2:62860859-62860878 MS.gene009694:CDS 35.0%
TGTTTCCTAATACTAGGCAT+AGG + chr5.2:62861542-62861561 MS.gene009694:CDS 35.0%
TTGAAATTGTCTCTCGATTG+TGG - chr5.2:62861989-62862008 None:intergenic 35.0%
TTGTGTGTATGATTCTCTTC+GGG + chr5.2:62861651-62861670 MS.gene009694:CDS 35.0%
! ATCTACATACACCGTTTTAG+AGG + chr5.2:62862104-62862123 MS.gene009694:CDS 35.0%
! ATGGTTTGGGTGAAAATGAT+TGG + chr5.2:62861716-62861735 MS.gene009694:CDS 35.0%
! ATTCTAACTTGTGCAAGAGA+AGG + chr5.2:62860782-62860801 MS.gene009694:CDS 35.0%
! CAATCCATTTTACTAGGTTG+CGG + chr5.2:62861388-62861407 MS.gene009694:CDS 35.0%
! GACAATACTCTCCTCTAAAA+CGG - chr5.2:62862118-62862137 None:intergenic 35.0%
! TGAATACCATTTTCGAAGAG+CGG + chr5.2:62861740-62861759 MS.gene009694:CDS 35.0%
! TGTTAGATTTTCGTAACCAC+CGG - chr5.2:62861074-62861093 None:intergenic 35.0%
! TTCACATTTTTACTCCATCG+TGG - chr5.2:62862306-62862325 None:intergenic 35.0%
! TTGGTGGTATGTTTGATTCA+TGG - chr5.2:62860811-62860830 None:intergenic 35.0%
! TTTCACAATCTTTTCAGTGG+TGG - chr5.2:62862655-62862674 None:intergenic 35.0%
!! ATTTGTTGTTTCAAAGGTCC+CGG - chr5.2:62860606-62860625 None:intergenic 35.0%
!! ATTTTGATAAACGATCAGGC+AGG + chr5.2:62861007-62861026 MS.gene009694:CDS 35.0%
!! GACAGCATTTGTTGTTTCAA+AGG - chr5.2:62860612-62860631 None:intergenic 35.0%
!! GATAACGGTTGCTTTAAAGA+AGG + chr5.2:62860874-62860893 MS.gene009694:CDS 35.0%
!! GTATTGTGTTGATTTCAACG+GGG + chr5.2:62862161-62862180 MS.gene009694:CDS 35.0%
!! TTGCTTTAAAGAAGGGTCTA+TGG + chr5.2:62860882-62860901 MS.gene009694:CDS 35.0%
!! TTTGTTGGTGTCAATCATCA+TGG + chr5.2:62861364-62861383 MS.gene009694:CDS 35.0%
!!! GGGTTGATGATTTTGTTGTT+GGG + chr5.2:62861671-62861690 MS.gene009694:CDS 35.0%
!!! TTGATGATTTTGTTGTTGGG+TGG + chr5.2:62861674-62861693 MS.gene009694:CDS 35.0%
AAGACCGCAACCTAGTAAAA+TGG - chr5.2:62861395-62861414 None:intergenic 40.0%
AATTGTAACCGATCAGTGCA+AGG + chr5.2:62861495-62861514 MS.gene009694:CDS 40.0%
ACTAAATCACGGTTGTTTGC+TGG + chr5.2:62860950-62860969 MS.gene009694:CDS 40.0%
ACTTCGACAACCGAAACAAT+TGG - chr5.2:62862705-62862724 None:intergenic 40.0%
AGATTGATATGCATGCACAG+CGG + chr5.2:62860981-62861000 MS.gene009694:CDS 40.0%
AGGTCTGCCTATGAATACTT+TGG + chr5.2:62861280-62861299 MS.gene009694:CDS 40.0%
ATACTTGTCATGGGTGTACT+CGG - chr5.2:62862013-62862032 None:intergenic 40.0%
ATGAGTATACAGCCACATTG+TGG + chr5.2:62862507-62862526 MS.gene009694:CDS 40.0%
ATGATTGACACCAACAAACG+GGG - chr5.2:62861362-62861381 None:intergenic 40.0%
CAAAAGAAAGACACCTTCTC+GGG + chr5.2:62861125-62861144 MS.gene009694:CDS 40.0%
CAAATGGTCTAGCAAGAAGT+TGG + chr5.2:62862479-62862498 MS.gene009694:CDS 40.0%
CGCAACCTAGTAAAATGGAT+TGG - chr5.2:62861390-62861409 None:intergenic 40.0%
CGTGAATATGCCATGAAACA+AGG + chr5.2:62860701-62860720 MS.gene009694:CDS 40.0%
GAACAAAAGTTTCCGTTCCA+TGG + chr5.2:62861039-62861058 MS.gene009694:CDS 40.0%
GAAGTAGTTAAGCGTATCAC+CGG - chr5.2:62862871-62862890 None:intergenic 40.0%
GAGAGATGTCAGAAACTTTG+TGG + chr5.2:62861102-62861121 MS.gene009694:CDS 40.0%
GAGCAATCAAGTTTCTTCGT+TGG - chr5.2:62860848-62860867 None:intergenic 40.0%
GATGATTGACACCAACAAAC+GGG - chr5.2:62861363-62861382 None:intergenic 40.0%
GCAAAAGAAAGACACCTTCT+CGG + chr5.2:62861124-62861143 MS.gene009694:CDS 40.0%
GCAAACAACCGTGATTTAGT+TGG - chr5.2:62860950-62860969 None:intergenic 40.0%
GGATCATAGCTTAAAGACGA+TGG + chr5.2:62862539-62862558 MS.gene009694:CDS 40.0%
GGATGATCGATCAATATAGG+AGG - chr5.2:62860524-62860543 None:intergenic 40.0%
GTACACCCATGACAAGTATA+TGG + chr5.2:62862014-62862033 MS.gene009694:CDS 40.0%
GTTGGATTCGTCTTCAAAGT+TGG - chr5.2:62860830-62860849 None:intergenic 40.0%
TCAAGCACAATCATTCCATG+CGG + chr5.2:62861955-62861974 MS.gene009694:CDS 40.0%
TCATAGCTTAAAGACGATGG+AGG + chr5.2:62862542-62862561 MS.gene009694:CDS 40.0%
TGATCGGTTACAATTCCCAT+TGG - chr5.2:62861490-62861509 None:intergenic 40.0%
TGCATCAATGAGCAAAGATG+TGG + chr5.2:62862929-62862948 MS.gene009694:CDS 40.0%
TGGTCATCTTAGAGTGAAAG+AGG + chr5.2:62862260-62862279 MS.gene009694:CDS 40.0%
TGTTTCGAACAACCAGGTAA+AGG - chr5.2:62861440-62861459 None:intergenic 40.0%
TTACCTGGTTGTTCGAAACA+TGG + chr5.2:62861440-62861459 MS.gene009694:CDS 40.0%
TTCCCTCATTCTAGCAAAGT+AGG - chr5.2:62861179-62861198 None:intergenic 40.0%
TTCCTAATACTAGGCATAGG+TGG + chr5.2:62861545-62861564 MS.gene009694:CDS 40.0%
TTTCGGTTGTCGAAGTAAGT+TGG + chr5.2:62862709-62862728 MS.gene009694:intron 40.0%
! AGGAATACGAGGCAGATTTT+CGG + chr5.2:62861929-62861948 MS.gene009694:CDS 40.0%
! CATGGCCAATCCATTTTACT+AGG + chr5.2:62861382-62861401 MS.gene009694:CDS 40.0%
! CCCTTACGTGGTACTTTTAA+CGG - chr5.2:62862606-62862625 None:intergenic 40.0%
! GAATACCATTTTCGAAGAGC+GGG + chr5.2:62861741-62861760 MS.gene009694:CDS 40.0%
! GATTGCAAACCCTTGTTTCA+TGG - chr5.2:62860714-62860733 None:intergenic 40.0%
!! AGACATGCGCTTTTTGTACT+TGG + chr5.2:62862240-62862259 MS.gene009694:CDS 40.0%
!! ATTCCTTTTCAGCCTTGTCT+TGG - chr5.2:62861915-62861934 None:intergenic 40.0%
!! CCGTTAAAAGTACCACGTAA+GGG + chr5.2:62862603-62862622 MS.gene009694:CDS 40.0%
!! TCCGTTAAAAGTACCACGTA+AGG + chr5.2:62862602-62862621 MS.gene009694:CDS 40.0%
!! TGTTTGCTGTTTGAGTTCAG+AGG + chr5.2:62862207-62862226 MS.gene009694:CDS 40.0%
!! TTAGAGGAGAGTATTGTCTG+TGG + chr5.2:62862120-62862139 MS.gene009694:CDS 40.0%
!!! CGGGTTGATGATTTTGTTGT+TGG + chr5.2:62861670-62861689 MS.gene009694:CDS 40.0%
ACTCCAAGACAAGGCTGAAA+AGG + chr5.2:62861909-62861928 MS.gene009694:CDS 45.0%
ATACAGCCACATTGTGGTGT+GGG + chr5.2:62862513-62862532 MS.gene009694:CDS 45.0%
ATTGTGGAATTTGACCCGCA+TGG - chr5.2:62861973-62861992 None:intergenic 45.0%
CAAGCACAATCATTCCATGC+GGG + chr5.2:62861956-62861975 MS.gene009694:CDS 45.0%
CAAGGCTGAAAAGGAATACG+AGG + chr5.2:62861918-62861937 MS.gene009694:CDS 45.0%
CACCACCTATGCCTAGTATT+AGG - chr5.2:62861550-62861569 None:intergenic 45.0%
CATCCTTTATTACCCCCTGA+CGG + chr5.2:62860539-62860558 MS.gene009694:CDS 45.0%
CTATGAGATTGACATGGACG+AGG + chr5.2:62861216-62861235 MS.gene009694:CDS 45.0%
GCTTGAAACCCATCAGACAT+AGG - chr5.2:62862846-62862865 None:intergenic 45.0%
GGATTCGTCTTCAAAGTTGG+TGG - chr5.2:62860827-62860846 None:intergenic 45.0%
GGCTATGCAGAATGCAATTC+AGG + chr5.2:62861516-62861535 MS.gene009694:CDS 45.0%
GGTTGTTCGAAACATGGCTA+AGG + chr5.2:62861446-62861465 MS.gene009694:CDS 45.0%
TAAACGATCAGGCAGGTGTA+CGG + chr5.2:62861014-62861033 MS.gene009694:CDS 45.0%
TAGCCATGTTTCGAACAACC+AGG - chr5.2:62861446-62861465 None:intergenic 45.0%
TATACAGCCACATTGTGGTG+TGG + chr5.2:62862512-62862531 MS.gene009694:CDS 45.0%
TCATCCCAACAGTCAACTAG+TGG + chr5.2:62862891-62862910 MS.gene009694:CDS 45.0%
TCGGTTACAATTCCCATTGG+AGG - chr5.2:62861487-62861506 None:intergenic 45.0%
TCTTTCCCGCTCTTCGAAAA+TGG - chr5.2:62861749-62861768 None:intergenic 45.0%
TTTCGAAGAGCGGGAAAGAT+GGG + chr5.2:62861750-62861769 MS.gene009694:CDS 45.0%
! CCTCTGTGTTGTTGACATTC+CGG - chr5.2:62861806-62861825 None:intergenic 45.0%
! TCTCGAAGGTGTGACTACAT+TGG + chr5.2:62862074-62862093 MS.gene009694:CDS 45.0%
! TTTTCGAAGAGCGGGAAAGA+TGG + chr5.2:62861749-62861768 MS.gene009694:CDS 45.0%
AAACGATCAGGCAGGTGTAC+GGG + chr5.2:62861015-62861034 MS.gene009694:CDS 50.0%
ACACCAACAAACGGGGCAAA+TGG - chr5.2:62861355-62861374 None:intergenic 50.0%
AGAAAGACACCTTCTCGGGA+AGG + chr5.2:62861129-62861148 MS.gene009694:CDS 50.0%
ATGTCTTCGAGGCCTCCAAT+GGG + chr5.2:62861472-62861491 MS.gene009694:CDS 50.0%
CCGGAATGTCAACAACACAG+AGG + chr5.2:62861803-62861822 MS.gene009694:CDS 50.0%
CGGCATCACATACCATGGAA+CGG - chr5.2:62861054-62861073 None:intergenic 50.0%
CGTTCCATGGTATGTGATGC+CGG + chr5.2:62861052-62861071 MS.gene009694:CDS 50.0%
CTAGGCATAGGTGGTGTCTA+TGG + chr5.2:62861554-62861573 MS.gene009694:CDS 50.0%
GACGTCCTCGAACTAATCGT+CGG + chr5.2:62862625-62862644 MS.gene009694:CDS 50.0%
GGCTAAGGTGTATGTCTTCG+AGG + chr5.2:62861461-62861480 MS.gene009694:CDS 50.0%
TATGTCTTCGAGGCCTCCAA+TGG + chr5.2:62861471-62861490 MS.gene009694:CDS 50.0%
TCTCCGTCAGGGGGTAATAA+AGG - chr5.2:62860545-62860564 None:intergenic 50.0%
! AACTCTAAGAAAGGGGCCGA+TGG + chr5.2:62860743-62860762 MS.gene009694:CDS 50.0%
! ATGCCATTTGCCCCGTTTGT+TGG + chr5.2:62861349-62861368 MS.gene009694:CDS 50.0%
! CGTGTTGACGTTTCGGATTC+CGG + chr5.2:62860584-62860603 MS.gene009694:CDS 50.0%
! CTGCATAGCCTTGCACTGAT+CGG - chr5.2:62861506-62861525 None:intergenic 50.0%
! GACAACCGACGATTAGTTCG+AGG - chr5.2:62862633-62862652 None:intergenic 50.0%
! GTGTTGACGTTTCGGATTCC+GGG + chr5.2:62860585-62860604 MS.gene009694:CDS 50.0%
!! TCTGATGGGTTTCAAGCGTC+CGG + chr5.2:62862849-62862868 MS.gene009694:CDS 50.0%
ACCACCGGCATCACATACCA+TGG - chr5.2:62861059-62861078 None:intergenic 55.0%
AGACACCTTCTCGGGAAGGA+AGG + chr5.2:62861133-62861152 MS.gene009694:CDS 55.0%
AGCCACATTGTGGTGTGGGA+GGG + chr5.2:62862517-62862536 MS.gene009694:CDS 55.0%
CATCTCCTTCCTTCCCGAGA+AGG - chr5.2:62861141-62861160 None:intergenic 55.0%
CGACAACGCACTCCAAGACA+AGG + chr5.2:62861900-62861919 MS.gene009694:CDS 55.0%
CTTCTCGGGAAGGAAGGAGA+TGG + chr5.2:62861139-62861158 MS.gene009694:CDS 55.0%
TCCATGGTATGTGATGCCGG+TGG + chr5.2:62861055-62861074 MS.gene009694:CDS 55.0%
TCTGGGCTGATGCACGTAGT+AGG + chr5.2:62861260-62861279 MS.gene009694:CDS 55.0%
! ATCAGCTAGCTCTCCGTCAG+GGG - chr5.2:62860555-62860574 None:intergenic 55.0%
! CATCAGCTAGCTCTCCGTCA+GGG - chr5.2:62860556-62860575 None:intergenic 55.0%
! TGCGGCTCGTGTTGACGTTT+CGG + chr5.2:62860577-62860596 MS.gene009694:CDS 55.0%
CAGCCACATTGTGGTGTGGG+AGG + chr5.2:62862516-62862535 MS.gene009694:CDS 60.0%
CCTGACGGAGAGCTAGCTGA+TGG + chr5.2:62860554-62860573 MS.gene009694:CDS 60.0%
CGGGAAGGAAGGAGATGGCA+GGG + chr5.2:62861144-62861163 MS.gene009694:CDS 60.0%
GCCACATTGTGGTGTGGGAG+GGG + chr5.2:62862518-62862537 MS.gene009694:CDS 60.0%
GTTCGAGGACGTCCCTTACG+TGG - chr5.2:62862618-62862637 None:intergenic 60.0%
TCCCCTCCCACACCACAATG+TGG - chr5.2:62862522-62862541 None:intergenic 60.0%
TCGGGAAGGAAGGAGATGGC+AGG + chr5.2:62861143-62861162 MS.gene009694:CDS 60.0%
! CCATCAGCTAGCTCTCCGTC+AGG - chr5.2:62860557-62860576 None:intergenic 60.0%
! CGGAGAGCTAGCTGATGGTG+CGG + chr5.2:62860559-62860578 MS.gene009694:CDS 60.0%
! TCAGCTAGCTCTCCGTCAGG+GGG - chr5.2:62860554-62860573 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr5.2 gene 62860509 62862968 62860509 ID=MS.gene009694
chr5.2 mRNA 62860509 62862968 62860509 ID=MS.gene009694.t1;Parent=MS.gene009694
chr5.2 exon 62860509 62862722 62860509 ID=MS.gene009694.t1.exon1;Parent=MS.gene009694.t1
chr5.2 CDS 62860509 62862722 62860509 ID=cds.MS.gene009694.t1;Parent=MS.gene009694.t1
chr5.2 exon 62862831 62862968 62862831 ID=MS.gene009694.t1.exon2;Parent=MS.gene009694.t1
chr5.2 CDS 62862831 62862968 62862831 ID=cds.MS.gene009694.t1;Parent=MS.gene009694.t1
Gene Sequence

>MS.gene009694

ATGGCTGATGGTCCTCCTATATTGATCGATCATCCTTTATTACCCCCTGACGGAGAGCTAGCTGATGGTGCGGCTCGTGTTGACGTTTCGGATTCCGGGACCTTTGAAACAACAAATGCTGTCGCAACAGATAAATTCACGCCTACTATCGGTATGTCTTTTAAATCGGTTGCAGATTGTAAGTCTTTTTACCGTGAATATGCCATGAAACAAGGGTTTGCAATCAAAACTAGAAACTCTAAGAAAGGGGCCGATGGCATGTTAAAATATTTCATTCTAACTTGTGCAAGAGAAGGTCACCATGAATCAAACATACCACCAACTTTGAAGACGAATCCAACGAAGAAACTTGATTGCTCAGCTAAGATAACGGTTGCTTTAAAGAAGGGTCTATGGACTATTTTGTCTTTTAATTCATGTCATAATCATGAGATAAGTCCAACTAAATCACGGTTGTTTGCTGGCAATAAGAAGATTGATATGCATGCACAGCGGACAATTTTGATAAACGATCAGGCAGGTGTACGGGTGAACAAAAGTTTCCGTTCCATGGTATGTGATGCCGGTGGTTACGAAAATCTAACATTTGTGGAGAGAGATGTCAGAAACTTTGTGGCAAAAGAAAGACACCTTCTCGGGAAGGAAGGAGATGGCAGGGCACTTTTATCCTACTTTGCTAGAATGAGGGAATGCAACAAAGACTTTTTCTATGAGATTGACATGGACGAGGACTTTCATGTGCAGAATATTTTCTGGGCTGATGCACGTAGTAGGTCTGCCTATGAATACTTTGGTGATGTTGTCACATTCGATACCACGTACTTGACAAACAAGTATGACATGCCATTTGCCCCGTTTGTTGGTGTCAATCATCATGGCCAATCCATTTTACTAGGTTGCGGTCTTTTATCATCTGAAGATAACAAGTCCTTTACCTGGTTGTTCGAAACATGGCTAAGGTGTATGTCTTCGAGGCCTCCAATGGGAATTGTAACCGATCAGTGCAAGGCTATGCAGAATGCAATTCAGGTTGTGTTTCCTAATACTAGGCATAGGTGGTGTCTATGGCATATAATGAGAAAAATTGCCGAAAAATTGAAAGGATACGCACAATACAAAGGAATAAAAAATGATATGAAAAATTGTGTGTATGATTCTCTTCGGGTTGATGATTTTGTTGTTGGGTGGACAACATTCATTGAAAAATATGGTTTGGGTGAAAATGATTGGTTGAATACCATTTTCGAAGAGCGGGAAAGATGGGTGCCATGTTATTTAAAAAATGATTTCTGGGCCGGAATGTCAACAACACAGAGGAGTGAAAGTATGAATGCTTTTTTCGATGGTTACATTAATGCAAGAACTTCTCTAAGCGAATTTGTAAAGCAATACGACAACGCACTCCAAGACAAGGCTGAAAAGGAATACGAGGCAGATTTTCGGTCTTCAAGCACAATCATTCCATGCGGGTCAAATTCCACAATCGAGAGACAATTTCAAGCCGAGTACACCCATGACAAGTATATGGAGATACAAGTAGAATTTCGTGGGAAATGCAACTGTTATCTCGAAGGTGTGACTACATTGGAATTTACATCTACATACACCGTTTTAGAGGAGAGTATTGTCTGTGGTAAACCGAACGAAACTAAGTATTGTGTTGATTTCAACGGGGAAGACAATAATGTTACGTGCACTTGTTTGCTGTTTGAGTTCAGAGGCATTTTGTGTAGACATGCGCTTTTTGTACTTGGTCATCTTAGAGTGAAAGAGGTTCCGTCTAAATTTATCTTGCCACGATGGAGTAAAAATGTGAAGAGAAAATATGCACACATGAAGACAAGTTACAATGCCAAAAAACTACAACCACACATAGAAAGATTTGAAGGTCTTTGCAAGACATTTTATGAAATTGCAGAATGTGCGGCTGAGACACCTAGTCAAACCTCTGATTTGTATGAAGAAATGATCAAATGGTCTAGCAAGAAGTTGGGCAAAATGAGTATACAGCCACATTGTGGTGTGGGAGGGGATCATAGCTTAAAGACGATGGAGGACTCATTATCACATCAACCTGATCAACCAATTCTTAATCCGTTAAAAGTACCACGTAAGGGACGTCCTCGAACTAATCGTCGGTTGTCCACCACTGAAAAGATTGTGAAAAAAAGAAGCAAAATGCAAAGAAAAAAACCAATTGTTTCGGTTGTCGAAGTAAGTTGGTGTTAACCTATTATTATTGTGATTACATTTGTTTTTTTAATAATAATACAATGTTAATTATGTTAAATGTAATTAATATTTCACTCTGTAATACTACAGCCTACATTACTTCCTATGTCTGATGGGTTTCAAGCGTCCGGTGATACGCTTAACTACTTCTCATCCCAACAGTCAACTAGTGGTTTTATGTCATTACTTGCATCAATGAGCAAAGATGTGGACGCAGCTGAATTTTAA
Protein sequence

>MS.gene009694.t1

MADGPPILIDHPLLPPDGELADGAARVDVSDSGTFETTNAVATDKFTPTIGMSFKSVADCKSFYREYAMKQGFAIKTRNSKKGADGMLKYFILTCAREGHHESNIPPTLKTNPTKKLDCSAKITVALKKGLWTILSFNSCHNHEISPTKSRLFAGNKKIDMHAQRTILINDQAGVRVNKSFRSMVCDAGGYENLTFVERDVRNFVAKERHLLGKEGDGRALLSYFARMRECNKDFFYEIDMDEDFHVQNIFWADARSRSAYEYFGDVVTFDTTYLTNKYDMPFAPFVGVNHHGQSILLGCGLLSSEDNKSFTWLFETWLRCMSSRPPMGIVTDQCKAMQNAIQVVFPNTRHRWCLWHIMRKIAEKLKGYAQYKGIKNDMKNCVYDSLRVDDFVVGWTTFIEKYGLGENDWLNTIFEERERWVPCYLKNDFWAGMSTTQRSESMNAFFDGYINARTSLSEFVKQYDNALQDKAEKEYEADFRSSSTIIPCGSNSTIERQFQAEYTHDKYMEIQVEFRGKCNCYLEGVTTLEFTSTYTVLEESIVCGKPNETKYCVDFNGEDNNVTCTCLLFEFRGILCRHALFVLGHLRVKEVPSKFILPRWSKNVKRKYAHMKTSYNAKKLQPHIERFEGLCKTFYEIAECAAETPSQTSDLYEEMIKWSSKKLGKMSIQPHCGVGGDHSLKTMEDSLSHQPDQPILNPLKVPRKGRPRTNRRLSTTEKIVKKRSKMQRKKPIVSVVEPTLLPMSDGFQASGDTLNYFSSQQSTSGFMSLLASMSKDVDAAEF