AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene009725

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene009725.t1 MTR_5g074400 94.718 549 22 6 1 545 36 581 0.0 904
MS.gene009725.t1 MTR_3g031220 55.379 567 167 21 2 544 3 507 1.47e-170 493
MS.gene009725.t1 MTR_7g071120 47.967 492 206 15 73 544 30 491 6.42e-129 385
MS.gene009725.t1 MTR_3g031220 57.647 425 115 16 2 403 3 385 4.55e-128 379
MS.gene009725.t1 MTR_3g031220 62.903 62 22 1 383 444 198 258 1.79e-18 87.8
MS.gene009725.t1 MTR_4g013260 48.642 405 150 14 48 446 47 399 1.50e-104 323
MS.gene009725.t1 MTR_3g009470 44.060 463 184 14 47 447 110 559 1.16e-94 303
MS.gene009725.t1 MTR_3g009470 54.118 85 37 2 383 466 280 363 1.44e-17 86.7
MS.gene009725.t1 MTR_3g009470 47.253 91 44 3 190 277 477 566 4.18e-15 79.0
MS.gene009725.t1 MTR_5g094430 42.955 440 196 13 26 447 26 428 6.04e-90 286
MS.gene009725.t1 MTR_5g094430 48.352 91 42 3 383 471 200 287 1.52e-15 80.1
MS.gene009725.t1 MTR_3g056100 40.789 456 194 13 28 445 47 464 1.13e-88 285
MS.gene009725.t1 MTR_3g056100 52.000 75 22 2 383 457 243 303 2.09e-15 79.7
MS.gene009725.t1 MTR_3g056100 40.517 464 197 14 28 445 47 477 5.30e-88 283
MS.gene009725.t1 MTR_3g056100 42.056 107 47 3 383 489 243 334 2.07e-15 79.7
MS.gene009725.t1 MTR_7g080020 37.992 508 218 12 25 445 58 555 2.46e-86 283
MS.gene009725.t1 MTR_7g080020 59.701 67 26 1 383 449 280 345 1.02e-16 84.0
MS.gene009725.t1 MTR_7g080020 46.078 102 44 4 206 297 493 593 1.25e-15 80.5
MS.gene009725.t1 MTR_7g011820 40.452 487 209 15 2 460 53 486 5.73e-85 273
MS.gene009725.t1 MTR_7g080000 39.286 448 201 10 43 445 73 494 1.45e-83 274
MS.gene009725.t1 MTR_7g080000 47.222 108 50 5 382 485 233 337 2.35e-15 79.7
MS.gene009725.t1 MTR_3g056100 58.025 243 84 6 203 445 96 320 2.15e-83 266
MS.gene009725.t1 MTR_3g056100 52.000 75 22 2 383 457 99 159 2.39e-15 79.0
MS.gene009725.t1 MTR_3g056100 56.972 251 87 7 203 445 96 333 6.32e-83 266
MS.gene009725.t1 MTR_3g056100 42.056 107 47 3 383 489 99 190 1.41e-15 79.7
MS.gene009725.t1 MTR_5g094430 57.613 243 90 4 205 447 65 294 8.90e-83 264
MS.gene009725.t1 MTR_5g094430 39.496 119 50 3 168 264 171 289 3.88e-16 80.9
MS.gene009725.t1 MTR_5g094430 48.352 91 42 3 383 471 66 153 1.59e-15 79.3
MS.gene009725.t1 MTR_5g094430 57.613 243 90 4 205 447 87 316 1.17e-82 264
MS.gene009725.t1 MTR_5g094430 39.496 119 50 3 168 264 193 311 4.33e-16 81.3
MS.gene009725.t1 MTR_5g094430 48.352 91 42 3 383 471 88 175 1.45e-15 79.3
MS.gene009725.t1 MTR_5g042920 49.660 294 111 10 179 452 112 388 1.23e-78 254
MS.gene009725.t1 MTR_5g042920 41.667 120 64 4 186 301 298 415 1.07e-15 79.7
MS.gene009725.t1 MTR_7g100510 48.374 246 120 2 198 442 181 420 1.17e-73 241
MS.gene009725.t1 MTR_4g082580 48.617 253 83 6 201 452 140 346 5.72e-70 230
MS.gene009725.t1 MTR_3g009470 39.857 419 177 14 47 403 110 515 1.49e-64 219
MS.gene009725.t1 MTR_3g009470 54.118 85 37 2 383 466 280 363 6.02e-18 87.4
MS.gene009725.t1 MTR_5g097490 42.629 251 127 4 196 446 82 315 1.44e-52 184
MS.gene009725.t1 MTR_4g130900 37.299 311 166 9 143 445 132 421 4.75e-48 174
MS.gene009725.t1 MTR_5g097500 33.594 256 138 6 193 446 68 293 2.57e-36 137
MS.gene009725.t1 MTR_5g074200 49.286 140 66 3 177 315 192 327 9.38e-34 131
MS.gene009725.t1 MTR_5g074200 50.000 78 35 2 383 457 220 296 3.36e-16 80.1
MS.gene009725.t1 MTR_8g007270 60.870 92 34 1 348 439 121 210 3.08e-33 126
MS.gene009725.t1 MTR_8g007270 38.333 120 56 4 161 262 92 211 1.37e-15 76.6
MS.gene009725.t1 MTR_1g077780 52.800 125 49 4 334 452 10 130 2.05e-32 122
MS.gene009725.t1 MTR_1g077780 45.122 82 39 2 189 264 40 121 2.14e-15 73.9
MS.gene009725.t1 MTR_3g095080 66.216 74 25 0 366 439 151 224 1.44e-29 117
MS.gene009725.t1 MTR_3g095080 55.172 58 25 1 206 262 168 225 1.35e-14 73.9
MS.gene009725.t1 MTR_3g095080 66.216 74 25 0 366 439 127 200 1.50e-29 116
MS.gene009725.t1 MTR_3g095080 55.172 58 25 1 206 262 144 201 1.52e-14 73.6
MS.gene009725.t1 MTR_8g092140 65.333 75 25 1 366 439 142 216 4.40e-28 112
MS.gene009725.t1 MTR_8g092140 55.172 58 25 1 206 262 160 217 1.17e-14 73.9
MS.gene009725.t1 MTR_7g079010 54.444 90 41 0 350 439 108 197 6.37e-27 108
MS.gene009725.t1 MTR_7g079010 50.769 65 31 1 198 261 133 197 1.50e-14 73.6
MS.gene009725.t1 MTR_2g033820 62.338 77 29 0 367 443 187 263 5.09e-26 110
MS.gene009725.t1 MTR_2g033820 52.941 68 31 1 206 272 203 270 7.31e-15 77.0
MS.gene009725.t1 MTR_1g015140 60.526 76 29 1 364 439 84 158 7.91e-26 103
MS.gene009725.t1 MTR_1g015140 49.231 65 32 1 198 261 94 158 1.98e-14 71.6
MS.gene009725.t1 MTR_8g096730 47.059 102 54 0 358 459 45 146 8.39e-26 103
MS.gene009725.t1 MTR_8g096730 56.140 57 24 1 206 261 70 126 4.18e-15 73.2
MS.gene009725.t1 MTR_4g094588 47.154 123 51 2 341 449 123 245 1.10e-25 108
MS.gene009725.t1 MTR_4g094588 55.072 69 30 1 206 273 178 246 6.88e-16 79.3
MS.gene009725.t1 MTR_7g109800 52.747 91 43 0 367 457 129 219 1.17e-25 107
MS.gene009725.t1 MTR_7g109800 37.273 110 62 3 176 278 109 218 4.44e-14 73.6
MS.gene009725.t1 MTR_3g104750 51.190 84 41 0 356 439 77 160 1.20e-25 103
MS.gene009725.t1 MTR_3g104750 52.632 57 26 1 206 261 104 160 1.70e-13 68.9
MS.gene009725.t1 MTR_1g086790 53.846 91 42 0 367 457 142 232 1.34e-25 107
MS.gene009725.t1 MTR_1g086790 51.562 64 30 1 206 268 158 221 1.11e-13 72.8
MS.gene009725.t1 MTR_5g091390 59.259 81 32 1 369 448 143 223 1.01e-24 105
MS.gene009725.t1 MTR_5g091390 52.239 67 31 1 206 271 157 223 1.15e-14 75.5
MS.gene009725.t1 MTR_5g043880 54.878 82 37 0 358 439 99 180 1.27e-24 103
MS.gene009725.t1 MTR_5g043880 57.895 57 23 1 206 261 124 180 1.50e-12 68.6
MS.gene009725.t1 MTR_7g028415 54.321 81 37 0 374 454 84 164 1.70e-24 100
MS.gene009725.t1 MTR_7g028415 52.632 57 26 1 206 261 93 149 2.18e-13 68.9
MS.gene009725.t1 MTR_7g028710 54.321 81 37 0 374 454 84 164 1.70e-24 100
MS.gene009725.t1 MTR_7g028710 52.632 57 26 1 206 261 93 149 2.18e-13 68.9
MS.gene009725.t1 MTR_4g107970 37.838 148 71 3 313 442 94 238 7.00e-24 105
MS.gene009725.t1 MTR_4g107970 52.459 61 27 2 206 264 178 238 1.44e-13 73.6
MS.gene009725.t1 MTR_2g045360 49.020 102 50 2 345 444 172 273 1.23e-23 103
MS.gene009725.t1 MTR_2g045360 39.535 86 45 3 200 278 200 285 3.15e-11 65.9
MS.gene009725.t1 MTR_4g122530 58.442 77 32 0 367 443 192 268 1.43e-23 103
MS.gene009725.t1 MTR_4g122530 53.125 64 29 1 206 268 208 271 1.76e-14 75.9
MS.gene009725.t1 MTR_4g107970 49.462 93 42 2 351 442 227 315 1.86e-23 104
MS.gene009725.t1 MTR_4g107970 52.459 61 27 2 206 264 255 315 1.86e-13 73.6
MS.gene009725.t1 MTR_3g053330 47.727 88 45 1 356 442 224 311 1.87e-23 103
MS.gene009725.t1 MTR_3g053330 40.000 85 49 2 207 289 252 336 2.60e-13 72.8
MS.gene009725.t1 MTR_4g132430 52.381 84 39 1 362 444 106 189 1.99e-23 102
MS.gene009725.t1 MTR_4g132430 49.180 61 29 2 206 264 127 187 3.23e-12 68.6
MS.gene009725.t1 MTR_3g095040 54.667 75 34 0 369 443 104 178 1.24e-22 96.3
MS.gene009725.t1 MTR_3g095040 53.333 60 27 1 206 264 118 177 6.82e-13 68.2
MS.gene009725.t1 MTR_4g132430 52.381 84 39 1 362 444 240 323 1.25e-22 101
MS.gene009725.t1 MTR_4g132430 49.180 61 29 2 206 264 261 321 8.61e-12 67.8
MS.gene009725.t1 MTR_8g092010 53.425 73 34 0 370 442 95 167 1.60e-22 95.5
MS.gene009725.t1 MTR_8g092010 53.333 60 27 1 206 264 108 167 4.79e-13 68.2
MS.gene009725.t1 MTR_2g088000 52.381 84 39 1 362 444 328 411 1.90e-22 101
MS.gene009725.t1 MTR_2g088000 39.759 83 48 2 206 286 349 431 6.49e-12 68.6
MS.gene009725.t1 MTR_2g023930 53.165 79 36 1 365 442 287 365 2.09e-22 101
MS.gene009725.t1 MTR_2g023930 50.000 60 28 2 207 264 306 365 2.98e-12 69.7
MS.gene009725.t1 MTR_7g110720 48.837 86 43 1 367 451 173 258 2.84e-22 99.8
MS.gene009725.t1 MTR_7g110720 50.000 60 28 2 207 264 190 249 4.48e-12 68.6
MS.gene009725.t1 MTR_4g094412 53.165 79 36 1 367 444 218 296 3.10e-22 100
MS.gene009725.t1 MTR_4g094412 52.459 61 27 2 206 264 234 294 6.13e-13 71.6
MS.gene009725.t1 MTR_4g094412 53.165 79 36 1 367 444 227 305 3.17e-22 100
MS.gene009725.t1 MTR_4g094412 52.459 61 27 2 206 264 243 303 6.87e-13 71.2
MS.gene009725.t1 MTR_7g110720 48.837 86 43 1 367 451 200 285 3.47e-22 99.8
MS.gene009725.t1 MTR_7g110720 50.000 60 28 2 207 264 217 276 5.11e-12 68.6
MS.gene009725.t1 MTR_7g009730 49.091 110 45 4 337 439 171 276 4.86e-22 100
MS.gene009725.t1 MTR_7g009730 51.724 58 26 2 206 261 219 276 2.13e-11 67.0
MS.gene009725.t1 MTR_4g049790 46.237 93 49 1 353 444 282 374 5.31e-21 97.1
MS.gene009725.t1 MTR_1g078260 47.959 98 47 2 343 439 210 304 1.00e-20 95.9
MS.gene009725.t1 MTR_1g078260 50.847 59 27 2 206 262 247 305 5.25e-11 65.5
MS.gene009725.t1 MTR_4g094908 51.765 85 37 2 364 447 250 331 1.16e-20 94.0
MS.gene009725.t1 MTR_4g094908 50.000 58 27 2 207 262 267 324 1.46e-12 69.3
MS.gene009725.t1 MTR_4g049760 44.118 102 56 1 344 444 251 352 1.22e-20 95.9
MS.gene009725.t1 MTR_1g009613 56.098 82 32 2 364 444 246 324 2.73e-20 92.8
MS.gene009725.t1 MTR_1g009613 54.386 57 24 2 207 261 263 319 1.51e-11 66.2
MS.gene009725.t1 MTR_7g062220 36.242 149 78 3 383 514 124 272 1.13e-19 90.5
MS.gene009725.t1 MTR_7g062220 63.158 57 20 1 206 261 124 180 1.23e-15 78.6
MS.gene009725.t1 MTR_6g086555 49.398 83 41 1 361 442 184 266 2.19e-19 90.9
MS.gene009725.t1 MTR_6g086555 37.168 113 53 5 204 298 204 316 1.57e-13 73.2
MS.gene009725.t1 MTR_6g046600 68.519 54 17 0 222 275 18 71 3.11e-19 84.0
MS.gene009725.t1 MTR_3g106060 53.425 73 31 3 370 439 123 195 3.54e-19 88.6
MS.gene009725.t1 MTR_3g106060 46.667 90 39 4 207 287 139 228 1.66e-15 77.8
MS.gene009725.t1 MTR_5g016610 51.899 79 37 1 364 441 180 258 8.39e-19 87.0
MS.gene009725.t1 MTR_5g016610 50.000 58 27 2 207 262 200 257 3.40e-12 67.4
MS.gene009725.t1 MTR_4g007060 43.396 106 49 4 353 453 103 202 1.52e-18 86.7
MS.gene009725.t1 MTR_4g007060 51.667 60 27 2 207 264 129 188 4.25e-14 73.2
MS.gene009725.t1 MTR_4g007060 43.396 106 49 4 353 453 137 236 2.39e-18 86.7
MS.gene009725.t1 MTR_4g007060 51.667 60 27 2 207 264 163 222 6.19e-14 73.2
MS.gene009725.t1 MTR_4g127040 48.276 87 44 1 363 448 225 311 2.49e-18 86.7
MS.gene009725.t1 MTR_1g013790 50.794 63 30 1 381 442 99 161 2.73e-18 85.1
MS.gene009725.t1 MTR_1g013790 44.286 70 37 2 207 274 102 171 3.32e-12 67.4
MS.gene009725.t1 MTR_2g105060 54.688 64 28 1 381 443 92 155 3.31e-18 84.7
MS.gene009725.t1 MTR_2g105060 50.000 60 28 2 207 264 95 154 8.07e-13 68.9
MS.gene009725.t1 MTR_2g105060 54.688 64 28 1 381 443 167 230 5.12e-18 85.5
MS.gene009725.t1 MTR_2g105060 50.000 60 28 2 207 264 170 229 1.05e-12 69.7
MS.gene009725.t1 MTR_1g013760 41.935 93 47 4 353 439 106 197 8.83e-18 84.3
MS.gene009725.t1 MTR_1g013760 50.877 57 26 2 207 261 141 197 2.38e-13 71.2
MS.gene009725.t1 MTR_3g108960 48.718 78 39 1 364 440 295 372 2.47e-16 81.6
MS.gene009725.t1 MTR_5g093540 40.323 124 50 5 196 315 146 249 2.90e-16 79.0
MS.gene009725.t1 MTR_1g070455 49.351 77 38 1 364 439 274 350 5.87e-16 80.1
MS.gene009725.t1 MTR_1g070455 54.237 59 25 2 207 263 294 352 4.62e-13 71.2
MS.gene009725.t1 MTR_4g047580 36.752 117 64 2 338 444 227 343 6.87e-16 80.9
MS.gene009725.t1 MTR_0117s0040 34.091 176 93 8 339 499 37 204 1.04e-15 77.4
MS.gene009725.t1 MTR_2g016770 52.381 63 29 1 384 445 36 98 3.75e-15 75.1
MS.gene009725.t1 MTR_2g016770 50.000 60 28 2 207 264 36 95 9.04e-12 65.1
MS.gene009725.t1 MTR_8g087000 40.000 90 51 2 384 470 78 167 4.31e-15 75.5
MS.gene009725.t1 MTR_8g087000 39.785 93 48 4 207 297 78 164 5.67e-12 66.2
MS.gene009725.t1 MTR_2g024350 53.226 62 28 1 384 444 9 70 4.62e-15 75.1
MS.gene009725.t1 MTR_2g024350 58.333 60 23 2 207 264 9 68 8.16e-15 74.3
MS.gene009725.t1 MTR_8g087000 40.000 90 51 2 384 470 77 166 4.74e-15 75.5
MS.gene009725.t1 MTR_8g087000 39.785 93 48 4 207 297 77 163 6.14e-12 66.2
MS.gene009725.t1 MTR_2g016770 52.381 63 29 1 384 445 28 90 5.18e-15 74.3
MS.gene009725.t1 MTR_2g016770 50.000 60 28 2 207 264 28 87 1.29e-11 64.7
MS.gene009725.t1 MTR_7g109600 46.575 73 38 1 384 455 54 126 1.40e-14 74.3
MS.gene009725.t1 MTR_7g109600 51.667 60 27 2 207 264 54 113 2.53e-11 64.7
MS.gene009725.t1 MTR_2g024380 58.333 60 23 2 207 264 252 311 2.48e-14 75.9
MS.gene009725.t1 MTR_2g024380 54.098 61 27 1 384 443 252 312 4.73e-14 75.1
MS.gene009725.t1 MTR_8g067635 31.579 171 96 5 203 357 346 511 5.82e-14 75.1
MS.gene009725.t1 MTR_8g067635 50.000 64 31 1 381 443 347 410 1.38e-12 70.5
MS.gene009725.t1 MTR_8g067650 51.471 68 31 2 203 268 336 403 7.30e-14 74.7
MS.gene009725.t1 MTR_8g067650 50.000 64 31 1 381 443 337 400 1.95e-12 70.1
MS.gene009725.t1 MTR_1g099600 38.947 95 56 2 364 457 167 260 8.11e-14 72.8
MS.gene009725.t1 MTR_1g099600 47.436 78 37 3 200 275 179 254 1.16e-12 69.3
MS.gene009725.t1 MTR_1g077760 67.500 40 13 0 364 403 95 134 1.98e-13 67.8
MS.gene009725.t1 MTR_5g044695 54.167 48 22 0 362 409 56 103 6.25e-13 65.5
MS.gene009725.t1 MTR_2g083870 47.619 63 32 1 384 445 81 143 7.03e-13 69.3
MS.gene009725.t1 MTR_2g032030 37.190 121 66 3 346 464 238 350 7.49e-13 71.2
MS.gene009725.t1 MTR_2g032030 37.190 121 66 3 346 464 238 350 7.59e-13 70.9
MS.gene009725.t1 MTR_8g098945 43.243 74 41 1 382 454 128 201 7.75e-13 69.3
MS.gene009725.t1 MTR_8g098945 43.011 93 44 5 207 292 130 220 3.23e-12 67.4
MS.gene009725.t1 MTR_8g069935 44.578 83 44 2 205 285 330 412 9.62e-13 70.9
MS.gene009725.t1 MTR_8g069935 42.857 63 35 1 383 444 331 393 1.56e-11 67.0
MS.gene009725.t1 MTR_3g090860 38.053 113 60 2 382 491 132 237 1.90e-12 68.9
MS.gene009725.t1 MTR_3g090860 51.724 58 24 2 206 259 133 190 2.83e-12 68.6
MS.gene009725.t1 MTR_3g095080 63.415 41 15 0 366 406 151 191 2.05e-12 66.6
MS.gene009725.t1 MTR_8g028565 46.154 78 40 2 384 460 156 232 2.24e-12 68.9
MS.gene009725.t1 MTR_7g079040 39.423 104 40 4 384 486 155 236 2.93e-12 68.6
MS.gene009725.t1 MTR_8g099350 51.724 58 24 2 206 259 132 189 3.23e-12 68.6
MS.gene009725.t1 MTR_8g099350 32.308 130 60 3 383 509 132 236 5.33e-11 64.7
MS.gene009725.t1 MTR_5g067680 48.276 58 26 2 206 259 202 259 3.71e-12 68.2
MS.gene009725.t1 MTR_5g067680 33.113 151 83 4 302 437 112 259 4.17e-12 68.2
MS.gene009725.t1 MTR_4g007060 40.244 82 43 2 353 433 137 213 1.71e-11 64.7
MS.gene009725.t1 MTR_6g038890 54.167 48 22 0 362 409 167 214 1.77e-11 64.3
MS.gene009725.t1 MTR_6g053200 29.412 119 72 3 383 496 330 441 4.70e-11 65.9
MS.gene009725.t1 MTR_4g021780 46.875 64 33 1 202 265 19 81 7.98e-11 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene009725.t1 AT2G38470 46.168 548 197 20 26 544 40 518 8.95e-112 342
MS.gene009725.t1 AT2G03340 44.165 437 189 14 27 462 108 490 1.21e-92 293
MS.gene009725.t1 AT5G07100 44.444 423 100 11 24 445 8 296 3.60e-92 285
MS.gene009725.t1 AT4G26640 41.920 427 208 10 43 452 7 410 3.36e-90 286
MS.gene009725.t1 AT4G26640 41.920 427 208 10 43 452 47 450 1.01e-89 286
MS.gene009725.t1 AT2G30250 43.534 464 164 14 2 444 3 389 1.09e-89 281
MS.gene009725.t1 AT2G30250 49.383 81 38 2 192 269 312 392 6.36e-16 80.1
MS.gene009725.t1 AT4G26640 54.440 259 99 5 200 452 29 274 3.44e-84 266
MS.gene009725.t1 AT4G26640 54.440 259 99 5 200 452 29 274 3.44e-84 266
MS.gene009725.t1 AT4G26640 54.440 259 99 5 200 452 29 274 3.44e-84 266
MS.gene009725.t1 AT4G26640 54.440 259 99 5 200 452 29 274 3.44e-84 266
MS.gene009725.t1 AT1G13960 41.725 429 174 10 27 442 103 468 3.79e-84 271
MS.gene009725.t1 AT4G26640 54.440 259 99 5 200 452 133 378 7.89e-84 269
MS.gene009725.t1 AT5G07100 57.025 242 42 5 205 445 23 203 3.93e-81 253
MS.gene009725.t1 AT5G07100 57.025 242 42 5 205 445 23 203 3.93e-81 253
MS.gene009725.t1 AT5G07100 57.025 242 42 5 205 445 23 203 3.93e-81 253
MS.gene009725.t1 AT5G07100 57.025 242 42 5 205 445 23 203 3.93e-81 253
MS.gene009725.t1 AT1G13960 51.341 261 103 4 195 442 66 315 5.50e-78 250
MS.gene009725.t1 AT4G26440 48.148 297 110 5 205 461 177 469 9.93e-76 250
MS.gene009725.t1 AT3G01080 51.261 238 78 4 205 442 204 403 2.33e-70 233
MS.gene009725.t1 AT3G01080 59.091 66 26 1 383 448 205 269 4.33e-17 84.3
MS.gene009725.t1 AT3G01080 47.674 86 42 2 182 264 318 403 7.61e-17 83.6
MS.gene009725.t1 AT3G01080 51.261 238 78 4 205 442 166 365 3.37e-70 231
MS.gene009725.t1 AT3G01080 59.091 66 26 1 383 448 167 231 4.89e-17 84.0
MS.gene009725.t1 AT3G01080 47.674 86 42 2 182 264 280 365 7.96e-17 83.2
MS.gene009725.t1 AT2G37260 46.324 272 97 6 198 441 77 327 5.31e-63 210
MS.gene009725.t1 AT2G37260 46.324 272 97 6 198 441 75 325 5.40e-63 210
MS.gene009725.t1 AT2G37260 46.324 272 97 6 198 441 157 407 4.74e-62 210
MS.gene009725.t1 AT2G04880 45.528 246 117 4 206 445 111 345 1.45e-61 210
MS.gene009725.t1 AT2G04880 54.688 64 28 1 381 444 109 171 2.28e-16 82.0
MS.gene009725.t1 AT2G04880 55.882 68 29 1 198 264 275 342 6.97e-16 80.9
MS.gene009725.t1 AT2G04880 43.446 267 116 6 206 445 111 369 5.70e-61 209
MS.gene009725.t1 AT2G04880 54.688 64 28 1 381 444 109 171 2.52e-16 82.0
MS.gene009725.t1 AT2G04880 55.882 68 29 1 198 264 299 366 7.13e-16 80.9
MS.gene009725.t1 AT4G30935 42.616 237 122 5 207 443 169 391 1.99e-49 177
MS.gene009725.t1 AT4G30935 50.000 70 34 1 207 275 332 401 3.50e-15 78.6
MS.gene009725.t1 AT5G56270 78.431 102 20 1 344 445 450 549 4.43e-47 175
MS.gene009725.t1 AT5G56270 39.648 227 119 4 54 269 117 336 4.77e-33 134
MS.gene009725.t1 AT5G56270 51.282 78 35 2 190 264 469 546 1.82e-15 80.1
MS.gene009725.t1 AT5G56270 60.000 60 23 1 383 442 273 331 1.87e-15 80.1
MS.gene009725.t1 AT4G12020 46.667 210 105 4 195 403 458 661 1.02e-44 170
MS.gene009725.t1 AT4G12020 48.529 68 34 1 382 449 467 533 8.47e-12 68.9
MS.gene009725.t1 AT4G12020 46.667 210 105 4 195 403 458 661 1.05e-44 170
MS.gene009725.t1 AT4G12020 48.529 68 34 1 382 449 467 533 8.25e-12 68.9
MS.gene009725.t1 AT4G12020 46.667 210 105 4 195 403 458 661 1.08e-44 170
MS.gene009725.t1 AT4G12020 48.529 68 34 1 382 449 467 533 8.60e-12 68.9
MS.gene009725.t1 AT4G12020 46.667 210 105 4 195 403 458 661 1.08e-44 170
MS.gene009725.t1 AT4G12020 48.529 68 34 1 382 449 467 533 8.60e-12 68.9
MS.gene009725.t1 AT4G12020 46.667 210 105 4 195 403 458 661 1.16e-44 170
MS.gene009725.t1 AT4G12020 48.529 68 34 1 382 449 467 533 8.63e-12 68.9
MS.gene009725.t1 AT4G12020 46.667 210 105 4 195 403 458 661 1.17e-44 170
MS.gene009725.t1 AT4G12020 48.529 68 34 1 382 449 467 533 8.40e-12 68.9
MS.gene009725.t1 AT4G12020 46.667 210 105 4 195 403 458 661 1.17e-44 170
MS.gene009725.t1 AT4G12020 48.529 68 34 1 382 449 467 533 8.27e-12 68.9
MS.gene009725.t1 AT4G12020 46.667 210 105 4 195 403 458 661 1.17e-44 170
MS.gene009725.t1 AT4G12020 48.529 68 34 1 382 449 467 533 8.27e-12 68.9
MS.gene009725.t1 AT4G12020 46.667 210 105 4 195 403 458 661 1.18e-44 170
MS.gene009725.t1 AT4G12020 48.529 68 34 1 382 449 467 533 8.70e-12 68.9
MS.gene009725.t1 AT4G12020 46.667 210 105 4 195 403 391 594 1.29e-44 170
MS.gene009725.t1 AT4G12020 48.529 68 34 1 382 449 400 466 9.34e-12 68.6
MS.gene009725.t1 AT4G12020 46.667 210 105 4 195 403 458 661 2.27e-44 169
MS.gene009725.t1 AT4G12020 50.820 61 29 1 382 442 467 526 1.11e-11 68.6
MS.gene009725.t1 AT2G44745 60.215 93 36 1 348 439 109 201 1.13e-33 127
MS.gene009725.t1 AT2G44745 59.649 57 22 1 206 261 145 201 1.89e-15 76.3
MS.gene009725.t1 AT4G39410 64.474 76 27 0 364 439 204 279 6.07e-28 114
MS.gene009725.t1 AT4G39410 45.946 74 37 2 192 262 207 280 2.34e-13 71.6
MS.gene009725.t1 AT1G55600 60.241 83 33 0 362 444 286 368 6.92e-28 117
MS.gene009725.t1 AT1G55600 55.000 60 26 1 206 264 307 366 3.62e-14 75.5
MS.gene009725.t1 AT1G29860 51.376 109 42 2 350 447 93 201 1.36e-26 109
MS.gene009725.t1 AT1G29860 49.333 75 36 2 206 279 136 209 8.72e-15 75.5
MS.gene009725.t1 AT4G18170 45.902 122 55 1 322 443 122 232 1.99e-26 110
MS.gene009725.t1 AT4G18170 40.000 130 75 3 206 333 172 300 2.89e-14 74.3
MS.gene009725.t1 AT3G01080 70.312 64 19 0 205 268 204 267 3.76e-26 109
MS.gene009725.t1 AT3G01080 59.091 66 26 1 383 448 205 269 1.01e-17 84.7
MS.gene009725.t1 AT1G69310 60.256 78 31 0 362 439 126 203 7.65e-26 107
MS.gene009725.t1 AT1G69310 54.386 57 25 1 206 261 147 203 1.95e-12 68.6
MS.gene009725.t1 AT1G69310 60.256 78 31 0 362 439 126 203 7.65e-26 107
MS.gene009725.t1 AT1G69310 54.386 57 25 1 206 261 147 203 1.95e-12 68.6
MS.gene009725.t1 AT1G69310 60.256 78 31 0 362 439 126 203 7.65e-26 107
MS.gene009725.t1 AT1G69310 54.386 57 25 1 206 261 147 203 1.95e-12 68.6
MS.gene009725.t1 AT1G64000 59.211 76 31 0 364 439 95 170 1.43e-25 104
MS.gene009725.t1 AT1G64000 56.140 57 24 1 206 261 114 170 5.68e-15 73.9
MS.gene009725.t1 AT5G41570 59.211 76 31 0 364 439 79 154 1.70e-25 103
MS.gene009725.t1 AT5G41570 56.140 57 24 1 206 261 98 154 1.32e-14 72.8
MS.gene009725.t1 AT5G13080 53.012 83 39 0 370 452 54 136 8.49e-25 100
MS.gene009725.t1 AT5G13080 54.386 57 25 1 206 261 67 123 3.26e-15 73.6
MS.gene009725.t1 AT5G49520 61.728 81 30 1 367 446 205 285 1.11e-24 106
MS.gene009725.t1 AT5G49520 53.125 64 29 1 206 268 221 284 8.80e-14 73.9
MS.gene009725.t1 AT5G26170 58.571 70 29 0 370 439 100 169 1.20e-24 101
MS.gene009725.t1 AT5G26170 51.724 58 27 1 206 262 113 170 1.64e-14 72.0
MS.gene009725.t1 AT5G46350 52.688 93 44 0 369 461 169 261 1.53e-24 105
MS.gene009725.t1 AT5G46350 50.000 72 35 1 198 268 175 246 4.17e-13 70.9
MS.gene009725.t1 AT2G46130 53.571 84 39 0 356 439 3 86 2.37e-24 98.2
MS.gene009725.t1 AT2G46130 59.649 57 22 1 206 261 30 86 7.64e-16 73.9
MS.gene009725.t1 AT2G47260 59.211 76 31 0 367 442 158 233 3.36e-24 104
MS.gene009725.t1 AT2G47260 53.125 64 29 1 206 268 174 237 3.91e-14 74.3
MS.gene009725.t1 AT3G01970 62.500 72 27 0 370 441 52 123 8.39e-24 97.8
MS.gene009725.t1 AT3G01970 57.627 59 22 2 206 262 65 122 4.32e-13 67.4
MS.gene009725.t1 AT4G04450 52.809 89 41 1 357 444 172 260 9.74e-24 104
MS.gene009725.t1 AT4G04450 43.836 73 39 2 207 277 199 271 3.94e-12 68.9
MS.gene009725.t1 AT1G62300 42.657 143 68 5 314 442 230 372 1.16e-23 105
MS.gene009725.t1 AT1G62300 50.000 60 28 2 207 264 313 372 1.41e-11 67.4
MS.gene009725.t1 AT5G64810 57.746 71 30 0 370 440 97 167 1.54e-23 98.6
MS.gene009725.t1 AT5G64810 50.877 57 27 1 206 261 110 166 1.55e-12 67.0
MS.gene009725.t1 AT5G15130 53.846 78 35 1 366 442 168 245 1.83e-23 104
MS.gene009725.t1 AT5G15130 44.595 74 39 2 206 277 185 258 3.60e-12 69.3
MS.gene009725.t1 AT5G15130 53.846 78 35 1 366 442 210 287 2.41e-23 104
MS.gene009725.t1 AT5G15130 44.595 74 39 2 206 277 227 300 3.59e-12 69.3
MS.gene009725.t1 AT4G04450 52.809 89 41 1 357 444 266 354 4.77e-23 103
MS.gene009725.t1 AT4G04450 43.836 73 39 2 207 277 293 365 6.27e-12 68.6
MS.gene009725.t1 AT4G22070 51.724 87 41 1 357 442 271 357 1.16e-22 102
MS.gene009725.t1 AT4G22070 50.000 60 28 2 207 264 298 357 1.17e-11 67.8
MS.gene009725.t1 AT4G22070 51.724 87 41 1 357 442 271 357 1.16e-22 102
MS.gene009725.t1 AT4G22070 50.000 60 28 2 207 264 298 357 1.17e-11 67.8
MS.gene009725.t1 AT4G22070 51.724 87 41 1 357 442 271 357 1.16e-22 102
MS.gene009725.t1 AT4G22070 50.000 60 28 2 207 264 298 357 1.17e-11 67.8
MS.gene009725.t1 AT4G22070 51.724 87 41 1 357 442 271 357 1.16e-22 102
MS.gene009725.t1 AT4G22070 50.000 60 28 2 207 264 298 357 1.17e-11 67.8
MS.gene009725.t1 AT1G68150 53.165 79 36 1 367 444 219 297 2.63e-22 99.4
MS.gene009725.t1 AT1G68150 52.459 61 27 2 206 264 235 295 3.26e-13 71.6
MS.gene009725.t1 AT1G18860 52.564 78 36 1 366 442 222 299 2.15e-21 98.2
MS.gene009725.t1 AT1G18860 50.820 61 28 2 206 264 239 299 3.46e-11 66.2
MS.gene009725.t1 AT1G69310 56.410 78 30 1 362 439 126 199 3.06e-21 94.4
MS.gene009725.t1 AT3G62340 47.525 101 43 1 367 467 102 192 8.45e-21 93.2
MS.gene009725.t1 AT3G62340 50.000 74 35 2 206 277 118 191 3.19e-13 70.9
MS.gene009725.t1 AT4G01720 54.545 77 34 1 367 442 223 299 1.47e-20 95.1
MS.gene009725.t1 AT4G01720 37.037 108 60 4 165 264 192 299 2.46e-11 66.6
MS.gene009725.t1 AT2G46130 50.000 84 38 1 356 439 3 82 9.64e-20 85.1
MS.gene009725.t1 AT2G46130 54.386 57 21 2 206 261 30 82 2.43e-11 61.2
MS.gene009725.t1 AT2G21900 50.000 76 35 1 372 444 95 170 1.52e-19 87.4
MS.gene009725.t1 AT2G21900 46.269 67 35 1 206 271 109 175 9.52e-13 67.8
MS.gene009725.t1 AT4G31550 55.128 78 31 2 364 440 229 303 2.28e-19 89.7
MS.gene009725.t1 AT4G31550 49.333 75 36 2 207 279 246 320 8.49e-14 73.2
MS.gene009725.t1 AT4G31550 55.128 78 31 2 364 440 230 304 2.38e-19 89.7
MS.gene009725.t1 AT4G31550 49.333 75 36 2 207 279 247 321 8.90e-14 73.2
MS.gene009725.t1 AT2G24570 57.143 77 29 2 364 439 227 300 2.71e-19 89.4
MS.gene009725.t1 AT2G24570 54.386 57 24 2 207 261 244 300 6.36e-13 70.5
MS.gene009725.t1 AT4G24240 52.500 80 37 1 363 441 261 340 2.85e-19 90.1
MS.gene009725.t1 AT4G24240 53.448 58 25 2 207 262 282 339 4.56e-13 71.2
MS.gene009725.t1 AT2G23320 50.633 79 35 2 364 441 224 299 3.07e-19 89.4
MS.gene009725.t1 AT2G23320 53.448 58 25 2 207 262 241 298 2.24e-12 68.6
MS.gene009725.t1 AT4G31800 50.704 71 33 2 376 444 103 173 1.68e-18 85.5
MS.gene009725.t1 AT4G31800 38.776 98 55 4 197 290 100 196 1.59e-14 73.9
MS.gene009725.t1 AT4G31800 50.704 71 33 2 376 444 168 238 3.19e-18 86.3
MS.gene009725.t1 AT4G31800 38.776 98 55 4 197 290 165 261 2.71e-14 74.3
MS.gene009725.t1 AT1G80840 51.562 64 30 1 381 443 144 207 3.41e-18 85.9
MS.gene009725.t1 AT1G80840 53.333 60 26 2 207 264 147 206 4.52e-13 70.5
MS.gene009725.t1 AT5G43290 43.434 99 38 2 359 439 72 170 1.59e-17 83.2
MS.gene009725.t1 AT5G43290 63.793 58 20 1 205 261 113 170 5.09e-16 79.0
MS.gene009725.t1 AT2G25000 50.000 64 31 1 382 444 102 165 1.91e-17 82.0
MS.gene009725.t1 AT2G25000 47.619 63 31 2 207 267 104 166 9.98e-13 68.2
MS.gene009725.t1 AT2G25000 50.000 64 31 1 382 444 102 165 1.91e-17 82.0
MS.gene009725.t1 AT2G25000 47.619 63 31 2 207 267 104 166 9.98e-13 68.2
MS.gene009725.t1 AT5G28650 50.649 77 37 1 364 439 243 319 2.12e-17 84.0
MS.gene009725.t1 AT5G28650 54.237 59 25 2 207 263 263 321 1.02e-12 69.7
MS.gene009725.t1 AT2G25000 50.000 64 31 1 382 444 124 187 3.86e-17 81.6
MS.gene009725.t1 AT2G25000 47.619 63 31 2 207 267 126 188 1.25e-12 68.6
MS.gene009725.t1 AT2G25000 50.000 64 31 1 382 444 145 208 5.51e-17 81.6
MS.gene009725.t1 AT2G25000 47.619 63 31 2 207 267 147 209 1.83e-12 68.2
MS.gene009725.t1 AT3G04670 50.649 77 37 1 364 439 243 319 5.69e-17 82.8
MS.gene009725.t1 AT3G04670 52.542 59 26 2 207 263 263 321 1.35e-12 69.3
MS.gene009725.t1 AT1G69810 46.835 79 40 2 366 442 128 206 8.53e-17 82.0
MS.gene009725.t1 AT1G69810 46.835 79 40 2 366 442 186 264 1.11e-16 82.4
MS.gene009725.t1 AT2G30590 51.948 77 36 1 364 439 294 370 1.15e-16 82.4
MS.gene009725.t1 AT2G30590 54.237 59 25 2 207 263 314 372 6.47e-12 67.8
MS.gene009725.t1 AT4G23550 44.156 77 42 1 372 447 129 205 5.05e-15 76.6
MS.gene009725.t1 AT5G52830 40.404 99 56 3 364 460 147 244 9.48e-14 73.2
MS.gene009725.t1 AT5G52830 44.048 84 43 3 205 286 164 245 3.11e-12 68.6
MS.gene009725.t1 AT4G01250 50.769 65 31 1 384 447 129 193 1.71e-13 71.6
MS.gene009725.t1 AT1G29280 50.000 60 29 1 384 442 75 134 1.78e-13 71.2
MS.gene009725.t1 AT5G24110 38.182 110 51 3 197 302 104 200 3.87e-13 70.9
MS.gene009725.t1 AT2G40740 36.283 113 52 4 330 438 135 231 1.27e-12 68.9
MS.gene009725.t1 AT2G40740 33.884 121 66 6 206 321 173 284 5.98e-12 67.0
MS.gene009725.t1 AT2G40740 36.607 112 51 4 330 437 144 239 1.51e-12 68.9
MS.gene009725.t1 AT2G40740 33.884 121 66 6 206 321 182 293 7.71e-12 67.0
MS.gene009725.t1 AT3G58710 48.387 62 31 1 384 444 72 133 1.87e-12 68.2
MS.gene009725.t1 AT3G58710 48.387 62 31 1 384 444 71 132 1.88e-12 68.2
MS.gene009725.t1 AT2G34830 36.893 103 56 2 346 447 195 289 5.22e-12 68.6
MS.gene009725.t1 AT2G34830 36.893 103 56 2 346 447 186 280 5.33e-12 68.6
MS.gene009725.t1 AT1G30650 37.624 101 54 2 346 445 188 280 6.73e-12 68.2
MS.gene009725.t1 AT4G23810 45.588 68 33 2 197 260 149 216 5.73e-11 64.3
MS.gene009725.t1 AT4G11070 45.588 68 31 3 197 259 100 166 7.03e-11 63.5
MS.gene009725.t1 AT2G46400 41.772 79 39 3 206 277 104 182 7.20e-11 63.9
MS.gene009725.t1 AT5G45050 46.154 65 34 1 384 447 1042 1106 7.80e-11 65.5
MS.gene009725.t1 AT5G45050 46.154 65 34 1 384 447 1153 1217 8.39e-11 65.5
MS.gene009725.t1 AT4G11070 45.588 68 31 3 197 259 132 198 8.69e-11 63.9
MS.gene009725.t1 AT5G45050 46.154 65 34 1 384 447 1181 1245 8.72e-11 65.5

Find 134 sgRNAs with CRISPR-Local

Find 208 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGCTGTGGTTGCTGGTAAC+TGG 0.245732 5.3:+58905273 None:intergenic
GAAATTTCTTACCTTGGATT+TGG 0.269502 5.3:+58904357 None:intergenic
TCAAGAAACATGTCATCTTT+AGG 0.274037 5.3:+58903377 None:intergenic
AGTTACTGAGATAGTTTATA+AGG 0.282812 5.3:-58905092 MS.gene009725:CDS
GGATACAATTGGCGAAAATA+TGG 0.295221 5.3:-58905217 MS.gene009725:CDS
ATGGCCATTGCTCCATTGTT+TGG 0.299684 5.3:+58903590 None:intergenic
ATCATCTGATCTTCGGCTTA+AGG 0.306175 5.3:+58905240 None:intergenic
AACGTGCCTCACATGATTTA+AGG 0.307899 5.3:-58903718 MS.gene009725:CDS
GAGTTGGTTGCTGTGGTTGC+TGG 0.312817 5.3:+58905266 None:intergenic
TTCTTCTTAGTAGGACAGTT+AGG 0.312859 5.3:+58905139 None:intergenic
CTGCAGGGCCAAGGAAATTA+TGG 0.315509 5.3:-58903500 MS.gene009725:CDS
ATTTCATTGATTGGATTAAC+AGG 0.319458 5.3:+58904995 None:intergenic
CAACAACAAATGGCTGAAAA+TGG 0.320050 5.3:-58903425 MS.gene009725:CDS
TCTCTCACAGTTCTACTTGC+AGG 0.324754 5.3:+58904474 None:intergenic
TGCTTCCTCACAGGACAGTT+TGG 0.325897 5.3:+58903746 None:intergenic
AAGTAAGAAGAAGGAGAAAC+AGG 0.327987 5.3:+58906816 None:intergenic
CTTGGCCCTGCAGCATTTGA+AGG 0.331367 5.3:+58903510 None:intergenic
CAGCAGCAGGCCCTTGTTGT+TGG 0.337044 5.3:+58906045 None:intergenic
GGTTACAGATGGAGGAAATA+TGG 0.355775 5.3:-58904402 MS.gene009725:CDS
CTGCTCAAAGTAGTTACAAT+TGG 0.361415 5.3:-58906124 MS.gene009725:CDS
CTGACTCTGAAGAGGCCTTA+TGG 0.364763 5.3:+58903571 None:intergenic
TGATCATGGATTTCATTGAT+TGG 0.366627 5.3:+58904986 None:intergenic
AGCAGCAGGCCCTTGTTGTT+GGG 0.372679 5.3:+58906046 None:intergenic
TTGGAAGAGTTAAGCATAAC+AGG 0.378565 5.3:+58906750 None:intergenic
GTGCATTTGTAGTAACTTCT+CGG 0.379548 5.3:+58905166 None:intergenic
TTTGGATTTGAAGGGTTGTT+TGG 0.379730 5.3:+58903608 None:intergenic
AAATCCATTGTTGGTGTTGT+TGG 0.383862 5.3:+58905309 None:intergenic
GCTCCATTGTTTGGATTTGA+AGG 0.388455 5.3:+58903599 None:intergenic
GAGAATTCTTCAATATCAAT+TGG 0.394609 5.3:-58904914 MS.gene009725:CDS
GCAGCAAAAGCACCAGTTGT+TGG 0.404545 5.3:+58906143 None:intergenic
TCTTACTTTGCTATTCCTCC+TGG 0.408483 5.3:-58906801 MS.gene009725:CDS
GCTTCCTCACAGGACAGTTT+GGG 0.414895 5.3:+58903747 None:intergenic
CTCTCAACTTTCTTCTTAGT+AGG 0.422831 5.3:+58905130 None:intergenic
GGCTGTGATCACAACTTATG+AGG 0.435418 5.3:-58903696 MS.gene009725:CDS
TGTATCCATCATCTGATCTT+CGG 0.437503 5.3:+58905233 None:intergenic
ATATGGACAAAAGCAAGTTA+AGG 0.439389 5.3:-58905200 MS.gene009725:CDS
GGTGACAAAGGCAAAGAAGG+AGG 0.447096 5.3:+58906843 None:intergenic
GGAGGTGACAAAGGCAAAGA+AGG 0.447183 5.3:+58906840 None:intergenic
GTCCCCGCTGCTCGTGGAAG+TGG 0.447277 5.3:-58903656 MS.gene009725:CDS
GGAGAATCAAGAAGGTCAGC+AGG 0.448810 5.3:+58906771 None:intergenic
GCAGCAGCAGCAACAACAAA+TGG 0.453051 5.3:-58903435 MS.gene009725:CDS
CAGATGATAATAACAATTCA+AGG 0.459469 5.3:-58906893 MS.gene009725:CDS
TATGGACAAAAGCAAGTTAA+GGG 0.462416 5.3:-58905199 MS.gene009725:CDS
GTTACTGAGATAGTTTATAA+GGG 0.464337 5.3:-58905091 MS.gene009725:CDS
CTTCCACTTCCACGAGCAGC+GGG 0.465424 5.3:+58903653 None:intergenic
ATTCAACCTTCAAATGCTGC+AGG 0.465828 5.3:-58903516 MS.gene009725:CDS
ACGTGCCTCACATGATTTAA+GGG 0.466411 5.3:-58903717 MS.gene009725:CDS
GAAAGTTGAGAGATCAATTG+AGG 0.467515 5.3:-58905119 MS.gene009725:CDS
CACCACCAGATCGACTCCTT+TGG 0.467879 5.3:+58904861 None:intergenic
GGAATAGCAAAGTAAGAAGA+AGG 0.472115 5.3:+58906807 None:intergenic
TTTGAAGGGTTGTTTGGCAT+TGG 0.472870 5.3:+58903614 None:intergenic
ATTGATATTGAAGAATTCTC+AGG 0.475349 5.3:+58904917 None:intergenic
TCTTCTTAGTAGGACAGTTA+GGG 0.476077 5.3:+58905140 None:intergenic
TCGAGAATCCATAATTTCCT+TGG 0.477194 5.3:+58903492 None:intergenic
GCATTGGTCTGTTCACAGAA+TGG 0.477391 5.3:+58903630 None:intergenic
AACAAGTGACATTGATATCC+TGG 0.483451 5.3:-58904430 MS.gene009725:CDS
CTTCGGCTTAAGGTTTGAGT+TGG 0.484985 5.3:+58905250 None:intergenic
TTTCAATCATCAACTGTTGG+TGG 0.486488 5.3:-58906002 MS.gene009725:CDS
ACAATGGAGCAATGGCCATA+AGG 0.487638 5.3:-58903586 MS.gene009725:CDS
GATCAGATGATGGATACAAT+TGG 0.492867 5.3:-58905228 MS.gene009725:CDS
CTCGAGGTTTGAGAATCAAA+TGG 0.503300 5.3:-58903474 MS.gene009725:CDS
GTTTGAACACTAGCAATCTC+AGG 0.510377 5.3:+58905331 None:intergenic
AGGTTCTTCCTTAGCTCTAG+AGG 0.512302 5.3:+58903397 None:intergenic
TGTCCTTGAGGTGGTTGTTG+TGG 0.514315 5.3:+58903545 None:intergenic
CTCCATTGTTTGGATTTGAA+GGG 0.516725 5.3:+58903600 None:intergenic
TGCAGCATTTGAAGGTTGAA+TGG 0.516930 5.3:+58903518 None:intergenic
TGCTGCTGCTGATACATGTA+AGG 0.517824 5.3:+58903449 None:intergenic
TCATATGCATCACATGGTAA+TGG 0.518462 5.3:-58904962 MS.gene009725:CDS
CTTCAAATGCTGCAGGGCCA+AGG 0.521689 5.3:-58903509 MS.gene009725:CDS
CACGAGCAGCGGGGACATCA+TGG 0.524422 5.3:+58903663 None:intergenic
AGGAGTCGATCTGGTGGTGC+TGG 0.525212 5.3:-58904857 MS.gene009725:CDS
ATCACATGGTAATGGACAAA+TGG 0.525938 5.3:-58904954 MS.gene009725:CDS
GTTGTCTGAACTACAACTCT+AGG 0.534551 5.3:+58904450 None:intergenic
AAGGTTTGAGTTGGTTGCTG+TGG 0.535972 5.3:+58905259 None:intergenic
TCTCACCAAAGGAGTCGATC+TGG 0.539091 5.3:-58904866 MS.gene009725:CDS
TCCATCTGTAACCATCATCC+AGG 0.539396 5.3:+58904412 None:intergenic
AAAGTTGAGAGATCAATTGA+GGG 0.542158 5.3:-58905118 MS.gene009725:CDS
GGGGAATCAGCAAATGAGAA+AGG 0.544170 5.3:-58906087 MS.gene009725:CDS
GTCTGATTGAAATCCATTGT+TGG 0.544770 5.3:+58905300 None:intergenic
GTGGATGCAGTAACAGCAGC+AGG 0.546307 5.3:+58906032 None:intergenic
CATGATGTCCCCGCTGCTCG+TGG 0.546686 5.3:-58903662 MS.gene009725:CDS
CAATTGGATGAACAATTCTG+AGG 0.555144 5.3:-58906108 MS.gene009725:CDS
GTGATGCATATGACTGATCA+TGG 0.555757 5.3:+58904972 None:intergenic
AGGTCAGCAGGGCTTAAACC+AGG 0.559224 5.3:+58906783 None:intergenic
CGTTCGACATGCTTCCTCAC+AGG 0.559951 5.3:+58903737 None:intergenic
GAGTTTCTCCTTGTGCATTG+AGG 0.560551 5.3:+58905049 None:intergenic
GTGACAAAGGCAAAGAAGGA+GGG 0.561545 5.3:+58906844 None:intergenic
AATTGGATGAACAATTCTGA+GGG 0.562917 5.3:-58906107 MS.gene009725:CDS
AAAGCACCAGTTGTTGGAGA+TGG 0.564393 5.3:+58906149 None:intergenic
CAAACCAACAACACCAACAA+TGG 0.565174 5.3:-58905313 MS.gene009725:CDS
TGACAAAGGCAAAGAAGGAG+GGG 0.573076 5.3:+58906845 None:intergenic
TCCTGGATGATGGTTACAGA+TGG 0.575655 5.3:-58904413 MS.gene009725:CDS
TTAAGCCGAAGATCAGATGA+TGG 0.580885 5.3:-58905238 MS.gene009725:CDS
GCTTCCACTTCCACGAGCAG+CGG 0.581893 5.3:+58903652 None:intergenic
AGATGATAATAACAATTCAA+GGG 0.581933 5.3:-58906892 MS.gene009725:CDS
AGTAAGAAGAAGGAGAAACA+GGG 0.582152 5.3:+58906817 None:intergenic
TTGAGCAGAGTTCTCACCAA+AGG 0.582395 5.3:-58904877 MS.gene009725:CDS
ATCATCTTCTAATGCTCTCG+TGG 0.586135 5.3:-58905023 MS.gene009725:CDS
AATTCTTCAATATCAATTGG+AGG 0.586744 5.3:-58904911 MS.gene009725:CDS
AATGGTGATTGTCCTTGAGG+TGG 0.587100 5.3:+58903536 None:intergenic
AAATCCAAACAATGGAGCAA+TGG 0.589039 5.3:-58903594 MS.gene009725:CDS
GACATTGATATCCTGGATGA+TGG 0.594877 5.3:-58904423 MS.gene009725:CDS
TAAGAAGAAGGAGAAACAGG+GGG 0.597289 5.3:+58906819 None:intergenic
ATATGGACAGAAAGTTGTCA+AGG 0.598161 5.3:-58904385 MS.gene009725:CDS
AACTGCAACAGCAACAGCAA+TGG 0.601468 5.3:-58905447 MS.gene009725:intron
TGTGGCCTCTGACTCTGAAG+AGG 0.602459 5.3:+58903563 None:intergenic
AGGAACCTGAGGCTAAAAGA+TGG 0.604909 5.3:-58904817 MS.gene009725:intron
GCATAACAGGAGAATCAAGA+AGG 0.606162 5.3:+58906763 None:intergenic
AACCCTTCAAATCCAAACAA+TGG 0.610392 5.3:-58903602 MS.gene009725:CDS
TGATGATTGAAAAGTAGTTG+TGG 0.610705 5.3:+58906013 None:intergenic
TGGATGATGGTTACAGATGG+AGG 0.611243 5.3:-58904410 MS.gene009725:CDS
GCTGTGATCACAACTTATGA+GGG 0.613415 5.3:-58903695 MS.gene009725:CDS
GAGAATCAAGAAGGTCAGCA+GGG 0.615872 5.3:+58906772 None:intergenic
CACCAAAGGAGTCGATCTGG+TGG 0.618731 5.3:-58904863 MS.gene009725:CDS
TCAAGGGCAATCCAAATCCA+AGG 0.619628 5.3:-58904368 MS.gene009725:intron
TAAGGCCTCTTCAGAGTCAG+AGG 0.620807 5.3:-58903568 MS.gene009725:CDS
TTGAATGGTGATTGTCCTTG+AGG 0.624194 5.3:+58903533 None:intergenic
TCATCTGAAGAAGCAGCAGA+AGG 0.624295 5.3:+58906909 None:intergenic
AAGGAAATTATGGATTCTCG+AGG 0.628224 5.3:-58903490 MS.gene009725:CDS
TATGGACAGAAAGTTGTCAA+GGG 0.628544 5.3:-58904384 MS.gene009725:CDS
TGGTGATGAATTTGATGTAG+AGG 0.633958 5.3:-58904837 MS.gene009725:CDS
AGGCCACAACAACCACCTCA+AGG 0.634387 5.3:-58903548 MS.gene009725:CDS
ATGCTAAGCCTCAATGCACA+AGG 0.636500 5.3:-58905057 MS.gene009725:CDS
GATGATAATAACAATTCAAG+GGG 0.636553 5.3:-58906891 MS.gene009725:CDS
GTAAGAAGAAGGAGAAACAG+GGG 0.638139 5.3:+58906818 None:intergenic
CACAGCCCTTAAATCATGTG+AGG 0.655326 5.3:+58903712 None:intergenic
GACAAAGGCAAAGAAGGAGG+GGG 0.657084 5.3:+58906846 None:intergenic
TTCAACCTTCAAATGCTGCA+GGG 0.658791 5.3:-58903515 MS.gene009725:CDS
GATCAGTCATATGCATCACA+TGG 0.661879 5.3:-58904968 MS.gene009725:CDS
ATTTGATGTAGAGGAACCTG+AGG 0.695973 5.3:-58904828 MS.gene009725:CDS
CACACCCAAACTGTCCTGTG+AGG 0.709529 5.3:-58903751 MS.gene009725:CDS
ATTGGATGAACAATTCTGAG+GGG 0.734397 5.3:-58906106 MS.gene009725:CDS
TCAGCAGGGCTTAAACCAGG+AGG 0.737654 5.3:+58906786 None:intergenic
TTCCACTTCCACGAGCAGCG+GGG 0.744388 5.3:+58903654 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GGAATATTTTTTATTTTTTT+TGG - chr5.3:58904024-58904043 MS.gene009725:intron 10.0%
!!! TAATTTTACATAACATTTTT+AGG - chr5.3:58905770-58905789 MS.gene009725:intron 10.0%
!!! TTTATGTAATTTTTATTTCA+CGG - chr5.3:58905741-58905760 MS.gene009725:intron 10.0%
!! GAGATTATAAAAATCAAATT+TGG - chr5.3:58904482-58904501 MS.gene009725:CDS 15.0%
!!! TTTATGTTATTTTTTGACAT+GGG - chr5.3:58903663-58903682 MS.gene009725:CDS 15.0%
!! AAAACATGGAATCATATTTA+TGG + chr5.3:58905543-58905562 None:intergenic 20.0%
!! AAAATGAAAGAAACTAACAT+TGG + chr5.3:58903575-58903594 None:intergenic 20.0%
!! AGAGATTAAAAACATTGAAT+TGG - chr5.3:58904447-58904466 MS.gene009725:CDS 20.0%
!! AGATGATAATAACAATTCAA+GGG - chr5.3:58903411-58903430 MS.gene009725:CDS 20.0%
!! AGATTGAATATAAATGATCA+TGG - chr5.3:58904003-58904022 MS.gene009725:intron 20.0%
!! AGTAATAACCAAATTAGAAA+AGG + chr5.3:58906233-58906252 None:intergenic 20.0%
!! GCAATAAATGCTTAAAAAAT+TGG + chr5.3:58904348-58904367 None:intergenic 20.0%
!! TTAAGAACTTCAATAAAACA+TGG + chr5.3:58905557-58905576 None:intergenic 20.0%
!! TTATGTTGTTACTGAATTTA+TGG - chr5.3:58904081-58904100 MS.gene009725:intron 20.0%
!! TTTCATCATCTATGTTTAAT+GGG - chr5.3:58903697-58903716 MS.gene009725:CDS 20.0%
!! TTTCTAATTTGGTTATTACT+TGG - chr5.3:58906233-58906252 MS.gene009725:intron 20.0%
!!! AACATTTTTAGGAAAAATGA+AGG - chr5.3:58905781-58905800 MS.gene009725:intron 20.0%
!!! ACATATGTCTTTTATCTTAT+TGG - chr5.3:58904782-58904801 MS.gene009725:intron 20.0%
!!! CACATTATTTTTGTTCAATT+TGG + chr5.3:58904720-58904739 None:intergenic 20.0%
!!! CTTTATGTTATTTTTTGACA+TGG - chr5.3:58903662-58903681 MS.gene009725:CDS 20.0%
!!! TTTTCATCATCTATGTTTAA+TGG - chr5.3:58903696-58903715 MS.gene009725:CDS 20.0%
!!! TTTTTTTGACATATGTTCAA+TGG - chr5.3:58903935-58903954 MS.gene009725:intron 20.0%
! AAAAATGAAGGTGAAAATGA+GGG - chr5.3:58905793-58905812 MS.gene009725:intron 25.0%
! AAATATTACCTAGTCAAATG+TGG - chr5.3:58906084-58906103 MS.gene009725:CDS 25.0%
! AATTCTTCAATATCAATTGG+AGG - chr5.3:58905392-58905411 MS.gene009725:CDS 25.0%
! AGTTACTGAGATAGTTTATA+AGG - chr5.3:58905211-58905230 MS.gene009725:CDS 25.0%
! ATATTTGTAAACTGCTATCA+TGG + chr5.3:58906070-58906089 None:intergenic 25.0%
! ATGAATTATTATAGTGGTTG+TGG - chr5.3:58905676-58905695 MS.gene009725:intron 25.0%
! ATTGATATTGAAGAATTCTC+AGG + chr5.3:58905389-58905408 None:intergenic 25.0%
! CAGATGATAATAACAATTCA+AGG - chr5.3:58903410-58903429 MS.gene009725:CDS 25.0%
! GAGAATTCTTCAATATCAAT+TGG - chr5.3:58905389-58905408 MS.gene009725:CDS 25.0%
! GATGATAATAACAATTCAAG+GGG - chr5.3:58903412-58903431 MS.gene009725:CDS 25.0%
! GTTACTGAGATAGTTTATAA+GGG - chr5.3:58905212-58905231 MS.gene009725:CDS 25.0%
! TAGTCAACTCTTGTAAAAAA+AGG + chr5.3:58903901-58903920 None:intergenic 25.0%
! TATTTGTAAACTGCTATCAT+GGG + chr5.3:58906069-58906088 None:intergenic 25.0%
! TTAAGCATTTATTGCATGTT+TGG - chr5.3:58904353-58904372 MS.gene009725:intron 25.0%
! TTGCTCATGAATTATTATAG+TGG - chr5.3:58905670-58905689 MS.gene009725:intron 25.0%
! TTTATGTTGAAGTAAAATGC+AGG - chr5.3:58905615-58905634 MS.gene009725:intron 25.0%
!! ACTGCAATTTAAAACTACTA+TGG - chr5.3:58905699-58905718 MS.gene009725:intron 25.0%
!! ATTTCATTGATTGGATTAAC+AGG + chr5.3:58905311-58905330 None:intergenic 25.0%
!! GTGATTAATTTATGACTTGT+AGG - chr5.3:58906513-58906532 MS.gene009725:intron 25.0%
!! TGCATTTTACTTCAACATAA+AGG + chr5.3:58905616-58905635 None:intergenic 25.0%
!! TTAATTTGAGTATCCAATGA+TGG - chr5.3:58906032-58906051 MS.gene009725:CDS 25.0%
!!! AAGATTGTTTGTTTTGTGTT+TGG - chr5.3:58903809-58903828 MS.gene009725:intron 25.0%
!!! CATTATTGCTTGTTTCTTTT+TGG - chr5.3:58906168-58906187 MS.gene009725:intron 25.0%
!!! TGAAGTTTGAACATGTTTTT+TGG - chr5.3:58903736-58903755 MS.gene009725:CDS 25.0%
!!! TTTGTTTCTCTATCTGTTTT+AGG - chr5.3:58906137-58906156 MS.gene009725:CDS 25.0%
AAAGTTGAGAGATCAATTGA+GGG - chr5.3:58905185-58905204 MS.gene009725:CDS 30.0%
AAGTGAGAAATTTCTTACCT+TGG + chr5.3:58905955-58905974 None:intergenic 30.0%
AAGTTCTTAAATTGCTGATG+CGG - chr5.3:58905567-58905586 MS.gene009725:intron 30.0%
AATTGGATGAACAATTCTGA+GGG - chr5.3:58904196-58904215 MS.gene009725:intron 30.0%
ATATGGACAAAAGCAAGTTA+AGG - chr5.3:58905103-58905122 MS.gene009725:CDS 30.0%
GAAAAATGAAGGTGAAAATG+AGG - chr5.3:58905792-58905811 MS.gene009725:intron 30.0%
GAAATTTCTTACCTTGGATT+TGG + chr5.3:58905949-58905968 None:intergenic 30.0%
GATCATTGAACAAGATCAAA+CGG + chr5.3:58904648-58904667 None:intergenic 30.0%
GCTAAGAAAAGTTTGAACAA+GGG - chr5.3:58903855-58903874 MS.gene009725:intron 30.0%
GGTTATTACTTGGTCAAATT+TGG - chr5.3:58906243-58906262 MS.gene009725:intron 30.0%
TAACCAAATTAGAAAAGGCA+AGG + chr5.3:58906228-58906247 None:intergenic 30.0%
TATGGACAAAAGCAAGTTAA+GGG - chr5.3:58905104-58905123 MS.gene009725:CDS 30.0%
TCAAGAAACATGTCATCTTT+AGG + chr5.3:58906929-58906948 None:intergenic 30.0%
TGATCATGGATTTCATTGAT+TGG + chr5.3:58905320-58905339 None:intergenic 30.0%
TGATGATTGAAAAGTAGTTG+TGG + chr5.3:58904293-58904312 None:intergenic 30.0%
TGCTAAGAAAAGTTTGAACA+AGG - chr5.3:58903854-58903873 MS.gene009725:intron 30.0%
TTAGAAAAGGCAAGGAAAAT+TGG + chr5.3:58906220-58906239 None:intergenic 30.0%
! ACTTTTCAATCATCAACTGT+TGG - chr5.3:58904298-58904317 MS.gene009725:intron 30.0%
! ACTTTTTACCACATTTGACT+AGG + chr5.3:58906095-58906114 None:intergenic 30.0%
! GTTTGGATTTTCTGTATGTT+AGG - chr5.3:58904370-58904389 MS.gene009725:CDS 30.0%
! TTTCCTTGCCTTTTCTAATT+TGG - chr5.3:58906222-58906241 MS.gene009725:intron 30.0%
!! CTTTTTGGAAACTCTACTAT+AGG - chr5.3:58906183-58906202 MS.gene009725:intron 30.0%
AAATCCAAACAATGGAGCAA+TGG - chr5.3:58906709-58906728 MS.gene009725:intron 35.0%
AACAAGTGACATTGATATCC+TGG - chr5.3:58905873-58905892 MS.gene009725:intron 35.0%
AACCCTTCAAATCCAAACAA+TGG - chr5.3:58906701-58906720 MS.gene009725:intron 35.0%
AAGGAAATTATGGATTCTCG+AGG - chr5.3:58906813-58906832 MS.gene009725:CDS 35.0%
AAGTAAGAAGAAGGAGAAAC+AGG + chr5.3:58903490-58903509 None:intergenic 35.0%
AGTAAGAAGAAGGAGAAACA+GGG + chr5.3:58903489-58903508 None:intergenic 35.0%
ATATGGACAGAAAGTTGTCA+AGG - chr5.3:58905918-58905937 MS.gene009725:intron 35.0%
ATTGGATGAACAATTCTGAG+GGG - chr5.3:58904197-58904216 MS.gene009725:intron 35.0%
CAACAACAAATGGCTGAAAA+TGG - chr5.3:58906878-58906897 MS.gene009725:CDS 35.0%
CAATTGGATGAACAATTCTG+AGG - chr5.3:58904195-58904214 MS.gene009725:intron 35.0%
CTCCATTGTTTGGATTTGAA+GGG + chr5.3:58906706-58906725 None:intergenic 35.0%
CTCTCAACTTTCTTCTTAGT+AGG + chr5.3:58905176-58905195 None:intergenic 35.0%
CTGCTCAAAGTAGTTACAAT+TGG - chr5.3:58904179-58904198 MS.gene009725:intron 35.0%
GAAAGTTGAGAGATCAATTG+AGG - chr5.3:58905184-58905203 MS.gene009725:CDS 35.0%
GGAATAGCAAAGTAAGAAGA+AGG + chr5.3:58903499-58903518 None:intergenic 35.0%
GGATACAATTGGCGAAAATA+TGG - chr5.3:58905086-58905105 MS.gene009725:CDS 35.0%
GTCTGATTGAAATCCATTGT+TGG + chr5.3:58905006-58905025 None:intergenic 35.0%
GTGCATTTGTAGTAACTTCT+CGG + chr5.3:58905140-58905159 None:intergenic 35.0%
TATGGACAGAAAGTTGTCAA+GGG - chr5.3:58905919-58905938 MS.gene009725:intron 35.0%
TCATATGCATCACATGGTAA+TGG - chr5.3:58905341-58905360 MS.gene009725:CDS 35.0%
TCGAGAATCCATAATTTCCT+TGG + chr5.3:58906814-58906833 None:intergenic 35.0%
TCTTCTTAGTAGGACAGTTA+GGG + chr5.3:58905166-58905185 None:intergenic 35.0%
TGTATCCATCATCTGATCTT+CGG + chr5.3:58905073-58905092 None:intergenic 35.0%
TTCTTCTTAGTAGGACAGTT+AGG + chr5.3:58905167-58905186 None:intergenic 35.0%
TTGGAAGAGTTAAGCATAAC+AGG + chr5.3:58903556-58903575 None:intergenic 35.0%
TTTCAATCATCAACTGTTGG+TGG - chr5.3:58904301-58904320 MS.gene009725:intron 35.0%
TTTGGATTTGAAGGGTTGTT+TGG + chr5.3:58906698-58906717 None:intergenic 35.0%
! ATTTACCATCTTTTAGCCTC+AGG + chr5.3:58905494-58905513 None:intergenic 35.0%
! CTTTTCAAACCCAACAACAA+GGG - chr5.3:58904248-58904267 MS.gene009725:intron 35.0%
! TCTTTTCAAACCCAACAACA+AGG - chr5.3:58904247-58904266 MS.gene009725:intron 35.0%
! TGGTGATGAATTTGATGTAG+AGG - chr5.3:58905466-58905485 MS.gene009725:intron 35.0%
!! AAATCCATTGTTGGTGTTGT+TGG + chr5.3:58904997-58905016 None:intergenic 35.0%
!! ATCACATGGTAATGGACAAA+TGG - chr5.3:58905349-58905368 MS.gene009725:CDS 35.0%
!! GATCAGATGATGGATACAAT+TGG - chr5.3:58905075-58905094 MS.gene009725:CDS 35.0%
AACGTGCCTCACATGATTTA+AGG - chr5.3:58906585-58906604 MS.gene009725:intron 40.0%
AAGGCAAGGAAAATTGGTAC+AGG + chr5.3:58906214-58906233 None:intergenic 40.0%
AAGTAAAATGCAGGCTGATG+CGG - chr5.3:58905624-58905643 MS.gene009725:intron 40.0%
ACGTGCCTCACATGATTTAA+GGG - chr5.3:58906586-58906605 MS.gene009725:intron 40.0%
ATCATCTGATCTTCGGCTTA+AGG + chr5.3:58905066-58905085 None:intergenic 40.0%
ATCATCTTCTAATGCTCTCG+TGG - chr5.3:58905280-58905299 MS.gene009725:CDS 40.0%
ATGTTATGTCCGTTCTGTGT+CGG - chr5.3:58906455-58906474 MS.gene009725:intron 40.0%
ATTCAACCTTCAAATGCTGC+AGG - chr5.3:58906787-58906806 MS.gene009725:CDS 40.0%
ATTTGATGTAGAGGAACCTG+AGG - chr5.3:58905475-58905494 MS.gene009725:intron 40.0%
CAAACCAACAACACCAACAA+TGG - chr5.3:58904990-58905009 MS.gene009725:CDS 40.0%
CATATCTGTCAGTGTCATGT+CGG + chr5.3:58906365-58906384 None:intergenic 40.0%
CGCAGTCAGTACATTAATGA+CGG - chr5.3:58904536-58904555 MS.gene009725:intron 40.0%
CTCGAGGTTTGAGAATCAAA+TGG - chr5.3:58906829-58906848 MS.gene009725:CDS 40.0%
GACATTGATATCCTGGATGA+TGG - chr5.3:58905880-58905899 MS.gene009725:intron 40.0%
GATCAGTCATATGCATCACA+TGG - chr5.3:58905335-58905354 MS.gene009725:CDS 40.0%
GCATAACAGGAGAATCAAGA+AGG + chr5.3:58903543-58903562 None:intergenic 40.0%
GCTCCATTGTTTGGATTTGA+AGG + chr5.3:58906707-58906726 None:intergenic 40.0%
GCTGTGATCACAACTTATGA+GGG - chr5.3:58906608-58906627 MS.gene009725:intron 40.0%
GGTTACAGATGGAGGAAATA+TGG - chr5.3:58905901-58905920 MS.gene009725:intron 40.0%
GTAAGAAGAAGGAGAAACAG+GGG + chr5.3:58903488-58903507 None:intergenic 40.0%
GTGATGCATATGACTGATCA+TGG + chr5.3:58905334-58905353 None:intergenic 40.0%
GTTGTCTGAACTACAACTCT+AGG + chr5.3:58905856-58905875 None:intergenic 40.0%
GTTTGAACACTAGCAATCTC+AGG + chr5.3:58904975-58904994 None:intergenic 40.0%
TAAGAAGAAGGAGAAACAGG+GGG + chr5.3:58903487-58903506 None:intergenic 40.0%
TGCAGCATTTGAAGGTTGAA+TGG + chr5.3:58906788-58906807 None:intergenic 40.0%
TTAAGCCGAAGATCAGATGA+TGG - chr5.3:58905065-58905084 MS.gene009725:CDS 40.0%
TTCAACCTTCAAATGCTGCA+GGG - chr5.3:58906788-58906807 MS.gene009725:CDS 40.0%
TTGAATGGTGATTGTCCTTG+AGG + chr5.3:58906773-58906792 None:intergenic 40.0%
TTTGAAGGGTTGTTTGGCAT+TGG + chr5.3:58906692-58906711 None:intergenic 40.0%
! ATTTTGCCATCTCCAACAAC+TGG - chr5.3:58904148-58904167 MS.gene009725:intron 40.0%
! GTCCATTAGTCTAGATTGGA+CGG - chr5.3:58904558-58904577 MS.gene009725:intron 40.0%
!! TATAAAGCACCGACACAGAA+CGG + chr5.3:58906467-58906486 None:intergenic 40.0%
!! TCTTACTTTGCTATTCCTCC+TGG - chr5.3:58903502-58903521 MS.gene009725:CDS 40.0%
!!! TGGTTTTTCCTCTAGAGCTA+AGG - chr5.3:58906898-58906917 MS.gene009725:CDS 40.0%
AAACTGCTATCATGGGAGTG+AGG + chr5.3:58906062-58906081 None:intergenic 45.0%
AACTGCAACAGCAACAGCAA+TGG - chr5.3:58904856-58904875 MS.gene009725:CDS 45.0%
AATGGTGATTGTCCTTGAGG+TGG + chr5.3:58906770-58906789 None:intergenic 45.0%
ACAATGGAGCAATGGCCATA+AGG - chr5.3:58906717-58906736 MS.gene009725:intron 45.0%
AGGAACCTGAGGCTAAAAGA+TGG - chr5.3:58905486-58905505 MS.gene009725:intron 45.0%
ATGCTAAGCCTCAATGCACA+AGG - chr5.3:58905246-58905265 MS.gene009725:CDS 45.0%
ATGGCCATTGCTCCATTGTT+TGG + chr5.3:58906716-58906735 None:intergenic 45.0%
CACAGCCCTTAAATCATGTG+AGG + chr5.3:58906594-58906613 None:intergenic 45.0%
CGACATCACAACTGCAATTG+TGG + chr5.3:58905650-58905669 None:intergenic 45.0%
CGACATGACACTGACAGATA+TGG - chr5.3:58906363-58906382 MS.gene009725:intron 45.0%
CTTCGGCTTAAGGTTTGAGT+TGG + chr5.3:58905056-58905075 None:intergenic 45.0%
GACACAGAACGGACATAACA+TGG + chr5.3:58906456-58906475 None:intergenic 45.0%
GACCGTCCAATCTAGACTAA+TGG + chr5.3:58904563-58904582 None:intergenic 45.0%
GAGAATCAAGAAGGTCAGCA+GGG + chr5.3:58903534-58903553 None:intergenic 45.0%
GAGTTTCTCCTTGTGCATTG+AGG + chr5.3:58905257-58905276 None:intergenic 45.0%
GGAGTGAGGAAATCCATCAT+TGG + chr5.3:58906048-58906067 None:intergenic 45.0%
GGCTGTGATCACAACTTATG+AGG - chr5.3:58906607-58906626 MS.gene009725:intron 45.0%
GGGGAATCAGCAAATGAGAA+AGG - chr5.3:58904216-58904235 MS.gene009725:intron 45.0%
GTGACAAAGGCAAAGAAGGA+GGG + chr5.3:58903462-58903481 None:intergenic 45.0%
TCAAGGGCAATCCAAATCCA+AGG - chr5.3:58905935-58905954 MS.gene009725:intron 45.0%
TCATCTGAAGAAGCAGCAGA+AGG + chr5.3:58903397-58903416 None:intergenic 45.0%
TCCATCTGTAACCATCATCC+AGG + chr5.3:58905894-58905913 None:intergenic 45.0%
TCTCTCACAGTTCTACTTGC+AGG + chr5.3:58905832-58905851 None:intergenic 45.0%
TGACAAAGGCAAAGAAGGAG+GGG + chr5.3:58903461-58903480 None:intergenic 45.0%
TGCTGCTGCTGATACATGTA+AGG + chr5.3:58906857-58906876 None:intergenic 45.0%
TTGAGCAGAGTTCTCACCAA+AGG - chr5.3:58905426-58905445 MS.gene009725:CDS 45.0%
! AAAGCACCAGTTGTTGGAGA+TGG + chr5.3:58904157-58904176 None:intergenic 45.0%
! GACGGTCCATTAGTCTAGAT+TGG - chr5.3:58904554-58904573 MS.gene009725:intron 45.0%
! GCATTGGTCTGTTCACAGAA+TGG + chr5.3:58906676-58906695 None:intergenic 45.0%
! TCCTGGATGATGGTTACAGA+TGG - chr5.3:58905890-58905909 MS.gene009725:intron 45.0%
! TGGATGATGGTTACAGATGG+AGG - chr5.3:58905893-58905912 MS.gene009725:intron 45.0%
!! AAGGTTTGAGTTGGTTGCTG+TGG + chr5.3:58905047-58905066 None:intergenic 45.0%
!! AGGTTCTTCCTTAGCTCTAG+AGG + chr5.3:58906909-58906928 None:intergenic 45.0%
!! GGGGGTGTAGACTTGAATTT+TGG + chr5.3:58903442-58903461 None:intergenic 45.0%
CTGCAGGGCCAAGGAAATTA+TGG - chr5.3:58906803-58906822 MS.gene009725:CDS 50.0%
GACAAAGGCAAAGAAGGAGG+GGG + chr5.3:58903460-58903479 None:intergenic 50.0%
GCAGCAGCAGCAACAACAAA+TGG - chr5.3:58906868-58906887 MS.gene009725:CDS 50.0%
GCTTCCTCACAGGACAGTTT+GGG + chr5.3:58906559-58906578 None:intergenic 50.0%
GGAGAATCAAGAAGGTCAGC+AGG + chr5.3:58903535-58903554 None:intergenic 50.0%
GGAGGTGACAAAGGCAAAGA+AGG + chr5.3:58903466-58903485 None:intergenic 50.0%
GGTGACAAAGGCAAAGAAGG+AGG + chr5.3:58903463-58903482 None:intergenic 50.0%
TAAGGCCTCTTCAGAGTCAG+AGG - chr5.3:58906735-58906754 MS.gene009725:intron 50.0%
TCTCACCAAAGGAGTCGATC+TGG - chr5.3:58905437-58905456 MS.gene009725:CDS 50.0%
TGCTTCCTCACAGGACAGTT+TGG + chr5.3:58906560-58906579 None:intergenic 50.0%
TGTCCTTGAGGTGGTTGTTG+TGG + chr5.3:58906761-58906780 None:intergenic 50.0%
TTGCTGTGGTTGCTGGTAAC+TGG + chr5.3:58905033-58905052 None:intergenic 50.0%
! CTGACTCTGAAGAGGCCTTA+TGG + chr5.3:58906735-58906754 None:intergenic 50.0%
!! GCAGCAAAAGCACCAGTTGT+TGG + chr5.3:58904163-58904182 None:intergenic 50.0%
AGGCCACAACAACCACCTCA+AGG - chr5.3:58906755-58906774 MS.gene009725:CDS 55.0%
AGGTCAGCAGGGCTTAAACC+AGG + chr5.3:58903523-58903542 None:intergenic 55.0%
CACACCCAAACTGTCCTGTG+AGG - chr5.3:58906552-58906571 MS.gene009725:intron 55.0%
CACCAAAGGAGTCGATCTGG+TGG - chr5.3:58905440-58905459 MS.gene009725:intron 55.0%
CGTTCGACATGCTTCCTCAC+AGG + chr5.3:58906569-58906588 None:intergenic 55.0%
CTTCAAATGCTGCAGGGCCA+AGG - chr5.3:58906794-58906813 MS.gene009725:CDS 55.0%
CTTGGCCCTGCAGCATTTGA+AGG + chr5.3:58906796-58906815 None:intergenic 55.0%
GAAACAGGGGGAGGTGACAA+AGG + chr5.3:58903475-58903494 None:intergenic 55.0%
GAAGAAGGAGAAACAGGGGG+AGG + chr5.3:58903484-58903503 None:intergenic 55.0%
GTGGATGCAGTAACAGCAGC+AGG + chr5.3:58904274-58904293 None:intergenic 55.0%
TCAGCAGGGCTTAAACCAGG+AGG + chr5.3:58903520-58903539 None:intergenic 55.0%
! CACCACCAGATCGACTCCTT+TGG + chr5.3:58905445-58905464 None:intergenic 55.0%
! GAGTTGGTTGCTGTGGTTGC+TGG + chr5.3:58905040-58905059 None:intergenic 55.0%
! TGTGGCCTCTGACTCTGAAG+AGG + chr5.3:58906743-58906762 None:intergenic 55.0%
!! AGCAGCAGGCCCTTGTTGTT+GGG + chr5.3:58904260-58904279 None:intergenic 55.0%
CTTCCACTTCCACGAGCAGC+GGG + chr5.3:58906653-58906672 None:intergenic 60.0%
GCTTCCACTTCCACGAGCAG+CGG + chr5.3:58906654-58906673 None:intergenic 60.0%
TTCCACTTCCACGAGCAGCG+GGG + chr5.3:58906652-58906671 None:intergenic 60.0%
! AGGAGTCGATCTGGTGGTGC+TGG - chr5.3:58905446-58905465 MS.gene009725:intron 60.0%
! CAGCAGCAGGCCCTTGTTGT+TGG + chr5.3:58904261-58904280 None:intergenic 60.0%
CACGAGCAGCGGGGACATCA+TGG + chr5.3:58906643-58906662 None:intergenic 65.0%
CATGATGTCCCCGCTGCTCG+TGG - chr5.3:58906641-58906660 MS.gene009725:intron 65.0%
GTCCCCGCTGCTCGTGGAAG+TGG - chr5.3:58906647-58906666 MS.gene009725:intron 70.0%


Chromosome Type Strat End Strand Name
chr5.3 gene 58903361 58906964 58903361 ID=MS.gene009725
chr5.3 mRNA 58903361 58906964 58903361 ID=MS.gene009725.t1;Parent=MS.gene009725
chr5.3 exon 58906749 58906964 58906749 ID=MS.gene009725.t1.exon1;Parent=MS.gene009725.t1
chr5.3 CDS 58906749 58906964 58906749 ID=cds.MS.gene009725.t1;Parent=MS.gene009725.t1
chr5.3 exon 58905992 58906177 58905992 ID=MS.gene009725.t1.exon2;Parent=MS.gene009725.t1
chr5.3 CDS 58905992 58906177 58905992 ID=cds.MS.gene009725.t1;Parent=MS.gene009725.t1
chr5.3 exon 58904818 58905458 58904818 ID=MS.gene009725.t1.exon3;Parent=MS.gene009725.t1
chr5.3 CDS 58904818 58905458 58904818 ID=cds.MS.gene009725.t1;Parent=MS.gene009725.t1
chr5.3 exon 58904369 58904533 58904369 ID=MS.gene009725.t1.exon4;Parent=MS.gene009725.t1
chr5.3 CDS 58904369 58904533 58904369 ID=cds.MS.gene009725.t1;Parent=MS.gene009725.t1
chr5.3 exon 58903361 58903790 58903361 ID=MS.gene009725.t1.exon5;Parent=MS.gene009725.t1
chr5.3 CDS 58903361 58903790 58903361 ID=cds.MS.gene009725.t1;Parent=MS.gene009725.t1
Gene Sequence

>MS.gene009725

ATGTCAACAACTTTCTCTGATCTTTTAGCTTCTCCTTCTGCTGCTTCTTCAGATGATAATAACAATTCAAGGGGTGTGCCAAAATTCAAGTCTACACCCCCTCCTTCTTTGCCTTTGTCACCTCCCCCTGTTTCTCCTTCTTCTTACTTTGCTATTCCTCCTGGTTTAAGCCCTGCTGACCTTCTTGATTCTCCTGTTATGCTTAACTCTTCCAATGTTAGTTTCTTTCATTTTCTTCACTTTTTTGTTTGATATTTTTTTTCAGTGTTTTTTTTTTGTTTTGAGAGAGTAAAGTTTTGAACTTTATGTTATTTTTTGACATGGGTTGTCTTTGTTTTTCATCATCTATGTTTAATGGGTTTGATGATAAACAAGTGAAGTTTGAACATGTTTTTTGGTTTTTGTTTTTGTTTTTTGACAGAAAACATGTTTTTTTTTTGTTGTTGTTAAGATTGTTTGTTTTGTGTTTGGTTTTGTTGACTATGATTTTTTATGCTAAGAAAAGTTTGAACAAGGGAAAGTTTAGACTTTTTTTTTCCTTTTTTTACAAGAGTTGACTAAATAATTAATTTGATTTTTTTGACATATGTTCAATGGTTTTGATGTTGAAGAAGAGCTTTTCATTTATTTTTAATCAATTGAAGATTGAATATAAATGATCATGGAATATTTTTTATTTTTTTTGGTTTGTGATTTTTGTTTCTTTGACTATATTTATATTTATGTTGTTACTGAATTTATGGACATGTGTCATTTTGTTTATGTTTGTTTGTTTGTTTTGATGCAGATTTTGCCATCTCCAACAACTGGTGCTTTTGCTGCTCAAAGTAGTTACAATTGGATGAACAATTCTGAGGGGAATCAGCAAATGAGAAAGGAAAATTTCTCTTTTCAAACCCAACAACAAGGGCCTGCTGCTGTTACTGCATCCACAACTACTTTTCAATCATCAACTGTTGGTGGAGTTCAACAAGTATGTTGTAACCAATTTTTTAAGCATTTATTGCATGTTTGGATTTTCTGTATGTTAGGCTGAGTTACTGTATGTGATTATGATTTTAACAAAAGCTAAGCTATACTTTAGATAGAGATTAAAAACATTGAATTGGATTTGCACTTTAGAGATTATAAAAATCAAATTTGGATTTTTTGCACTTACGAATGTCAAGCATTCACGCAGTCAGTACATTAATGACGGTCCATTAGTCTAGATTGGACGGTCTAGATTTTAAGTTTAGAATTTTACGATTTAAAAATTTAATCAAAATGTGTTTTCTTTTTGAACCGTTTGATCTTGTTCAATGATCGTTTATGTGTTGATTATGTGAATGCGTGAAGTTTGCGACTAGAACTAATCCAAATTGAACAAAAATAATGTGATATTAAATGTCATTTCATACATGTAAATTCTCTATGCAAAAACATATGTCTTTTATCTTATTGGTTTTTGAATTGAAAAAGTGATTTTCTCTAAAAATGTTCAACTTTTTCATGTAACTGCAACAGCAACAGCAATGGAGTTATCAAGAGAACACAAATCAGAATGCTTTTTCTTCTGAAAAGAATATGATACAAACTGAAAACAACAACTCTTCAATGCAGAGTTTTTCACCTGAGATTGCTAGTGTTCAAACCAACAACACCAACAATGGATTTCAATCAGACTACTCCAGTTACCAGCAACCACAGCAACCAACTCAAACCTTAAGCCGAAGATCAGATGATGGATACAATTGGCGAAAATATGGACAAAAGCAAGTTAAGGGAAGTGAAAATCCGAGAAGTTACTACAAATGCACTTACCCTAACTGTCCTACTAAGAAGAAAGTTGAGAGATCAATTGAGGGACAAGTTACTGAGATAGTTTATAAGGGTACTCATAATCATGCTAAGCCTCAATGCACAAGGAGAAACTCGTCATCATCTTCTAATGCTCTCGTGGTTGTTCCTGTTAATCCAATCAATGAAATCCATGATCAGTCATATGCATCACATGGTAATGGACAAATGGATTCTGCTGCTACTCCTGAGAATTCTTCAATATCAATTGGAGGTGATGATGATTTTGAGCAGAGTTCTCACCAAAGGAGTCGATCTGGTGGTGCTGGTGATGAATTTGATGTAGAGGAACCTGAGGCTAAAAGATGGTAAATTTTTTATTTTATTTTAACACTTAGCACCATAAATATGATTCCATGTTTTATTGAAGTTCTTAAATTGCTGATGCGGTCGCAATTATATTATGTCACGAGCCTTTATGTTGAAGTAAAATGCAGGCTGATGCGGCCACAATTGCAGTTGTGATGTCGTTGCTCATGAATTATTATAGTGGTTGTGGACTGCAATTTAAAACTACTATGGTCTTGTCTTGATATATTCATTTATGTAATTTTTATTTCACGGCTAATTTAATTTTACATAACATTTTTAGGAAAAATGAAGGTGAAAATGAGGGTATATCAGCACAACCTGCAAGTAGAACTGTGAGAGAACCTAGAGTTGTAGTTCAGACAACAAGTGACATTGATATCCTGGATGATGGTTACAGATGGAGGAAATATGGACAGAAAGTTGTCAAGGGCAATCCAAATCCAAGGTAAGAAATTTCTCACTTTATGTTTACTTCTTGAAATTTATACTGTTTTGAAGATCTTATAGAAAGTACTATTAGTTAATTTGAGTATCCAATGATGGATTTCCTCACTCCCATGATAGCAGTTTACAAATATTACCTAGTCAAATGTGGTAAAAAGTTACAACTGTGTAATGAATTGTATTTGTTTCTCTATCTGTTTTAGGTACTTTAGCATTATTGCTTGTTTCTTTTTGGAAACTCTACTATAGGCTAAACCTGTACCAATTTTCCTTGCCTTTTCTAATTTGGTTATTACTTGGTCAAATTTGGCAACTATAATATTCTCAAATTTGCATGCTTCTAGAAAAAGAATAGTAGTTCTAGACTATATATCACATACACTTCAAATTGAACATGTGTGTGACGCCGACATGACACTGACAGATATGGTTACATATAGTTATTTCATTTTCTCAAATTATTATCAACGTTGACTTGTCAGTGTCTGTGTTAGTGTCCATGTTATGTCCGTTCTGTGTCGGTGCTTTATATGTTCTAGATTGTGTTATTTAATTTTGTGATTAATTTATGACTTGTAGGAGTTACTACAAATGCACACACCCAAACTGTCCTGTGAGGAAGCATGTCGAACGTGCCTCACATGATTTAAGGGCTGTGATCACAACTTATGAGGGAAAACATAACCATGATGTCCCCGCTGCTCGTGGAAGTGGAAGCCATTCTGTGAACAGACCAATGCCAAACAACCCTTCAAATCCAAACAATGGAGCAATGGCCATAAGGCCTCTTCAGAGTCAGAGGCCACAACAACCACCTCAAGGACAATCACCATTCAACCTTCAAATGCTGCAGGGCCAAGGAAATTATGGATTCTCGAGGTTTGAGAATCAAATGGTGCCTTACATGTATCAGCAGCAGCAGCAACAACAAATGGCTGAAAATGGTTTTTCCTCTAGAGCTAAGGAAGAACCTAAAGATGACATGTTTCTTGAATCTTTGCTGTGCTGA
Protein sequence

>MS.gene009725.t1

MSTTFSDLLASPSAASSDDNNNSRGVPKFKSTPPPSLPLSPPPVSPSSYFAIPPGLSPADLLDSPVMLNSSNILPSPTTGAFAAQSSYNWMNNSEGNQQMRKENFSFQTQQQGPAAVTASTTTFQSSTVGGVQQQQQWSYQENTNQNAFSSEKNMIQTENNNSSMQSFSPEIASVQTNNTNNGFQSDYSSYQQPQQPTQTLSRRSDDGYNWRKYGQKQVKGSENPRSYYKCTYPNCPTKKKVERSIEGQVTEIVYKGTHNHAKPQCTRRNSSSSSNALVVVPVNPINEIHDQSYASHGNGQMDSAATPENSSISIGGDDDFEQSSHQRSRSGGAGDEFDVEEPEAKRWKNEGENEGISAQPASRTVREPRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTHPNCPVRKHVERASHDLRAVITTYEGKHNHDVPAARGSGSHSVNRPMPNNPSNPNNGAMAIRPLQSQRPQQPPQGQSPFNLQMLQGQGNYGFSRFENQMVPYMYQQQQQQQMAENGFSSRAKEEPKDDMFLESLLC