Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene00980.t1 | XP_003594006.1 | 84.7 | 393 | 2 | 1 | 1 | 335 | 1 | 393 | 3.30E-185 | 657.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene00980.t1 | Q8VY21 | 61.6 | 383 | 82 | 4 | 12 | 335 | 30 | 406 | 4.7e-132 | 472.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene00980.t1 | G7ISK0 | 84.7 | 393 | 2 | 1 | 1 | 335 | 1 | 393 | 2.4e-185 | 657.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene00980.t1 | TF | TUB |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene00980.t1 | MTR_2g020280 | 82.952 | 393 | 9 | 2 | 1 | 335 | 1 | 393 | 0.0 | 653 |
| MS.gene00980.t1 | MTR_2g020280 | 90.785 | 293 | 23 | 1 | 43 | 335 | 6 | 294 | 0.0 | 550 |
| MS.gene00980.t1 | MTR_1g088960 | 57.772 | 386 | 98 | 7 | 11 | 335 | 21 | 402 | 6.43e-150 | 427 |
| MS.gene00980.t1 | MTR_2g007930 | 48.031 | 381 | 117 | 8 | 34 | 335 | 49 | 427 | 4.56e-112 | 332 |
| MS.gene00980.t1 | MTR_1g098790 | 58.099 | 284 | 96 | 4 | 75 | 335 | 148 | 431 | 1.64e-110 | 328 |
| MS.gene00980.t1 | MTR_5g020580 | 48.000 | 375 | 118 | 7 | 32 | 335 | 48 | 416 | 9.00e-108 | 321 |
| MS.gene00980.t1 | MTR_1g022370 | 48.611 | 360 | 115 | 7 | 39 | 335 | 70 | 422 | 9.61e-105 | 313 |
| MS.gene00980.t1 | MTR_8g077195 | 59.398 | 266 | 99 | 3 | 77 | 335 | 149 | 412 | 3.04e-102 | 306 |
| MS.gene00980.t1 | MTR_2g076200 | 53.585 | 265 | 92 | 5 | 74 | 335 | 135 | 371 | 1.45e-89 | 273 |
| MS.gene00980.t1 | MTR_2g076210 | 47.566 | 267 | 106 | 8 | 74 | 335 | 130 | 367 | 2.34e-66 | 213 |
| MS.gene00980.t1 | MTR_8g077650 | 37.059 | 340 | 166 | 12 | 1 | 327 | 24 | 328 | 4.54e-52 | 175 |
| MS.gene00980.t1 | MTR_8g077675 | 41.762 | 261 | 134 | 9 | 77 | 328 | 144 | 395 | 4.32e-50 | 172 |
| MS.gene00980.t1 | MTR_8g077620 | 40.304 | 263 | 124 | 9 | 74 | 326 | 145 | 384 | 2.81e-48 | 167 |
| MS.gene00980.t1 | MTR_8g077640 | 28.613 | 346 | 131 | 11 | 39 | 325 | 95 | 383 | 1.88e-27 | 111 |
| MS.gene00980.t1 | MTR_2g105390 | 53.226 | 62 | 22 | 2 | 273 | 334 | 305 | 359 | 7.98e-13 | 68.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene00980.t1 | AT2G47900 | 60.156 | 384 | 87 | 5 | 12 | 335 | 30 | 407 | 7.89e-155 | 440 |
| MS.gene00980.t1 | AT2G47900 | 60.836 | 383 | 85 | 6 | 12 | 335 | 30 | 406 | 2.30e-154 | 439 |
| MS.gene00980.t1 | AT2G47900 | 60.836 | 383 | 85 | 6 | 12 | 335 | 30 | 406 | 2.30e-154 | 439 |
| MS.gene00980.t1 | AT3G06380 | 48.980 | 392 | 126 | 9 | 4 | 335 | 3 | 380 | 1.80e-114 | 337 |
| MS.gene00980.t1 | AT5G18680 | 48.635 | 403 | 120 | 12 | 4 | 335 | 3 | 389 | 2.64e-113 | 334 |
| MS.gene00980.t1 | AT3G06380 | 62.879 | 264 | 88 | 5 | 73 | 335 | 34 | 288 | 8.28e-109 | 319 |
| MS.gene00980.t1 | AT5G18680 | 61.172 | 273 | 79 | 7 | 74 | 335 | 41 | 297 | 2.99e-108 | 318 |
| MS.gene00980.t1 | AT1G25280 | 47.342 | 395 | 112 | 9 | 34 | 335 | 54 | 445 | 8.79e-104 | 311 |
| MS.gene00980.t1 | AT1G43640 | 42.857 | 385 | 132 | 9 | 34 | 335 | 50 | 429 | 7.45e-100 | 301 |
| MS.gene00980.t1 | AT2G18280 | 46.175 | 366 | 122 | 8 | 32 | 335 | 41 | 393 | 1.15e-99 | 300 |
| MS.gene00980.t1 | AT2G18280 | 46.175 | 366 | 122 | 8 | 32 | 335 | 41 | 393 | 1.15e-99 | 300 |
| MS.gene00980.t1 | AT1G76900 | 43.541 | 418 | 122 | 10 | 25 | 335 | 45 | 455 | 4.55e-98 | 297 |
| MS.gene00980.t1 | AT1G76900 | 43.541 | 418 | 122 | 10 | 25 | 335 | 45 | 455 | 4.55e-98 | 297 |
| MS.gene00980.t1 | AT1G76900 | 43.541 | 418 | 122 | 10 | 25 | 335 | 45 | 455 | 4.55e-98 | 297 |
| MS.gene00980.t1 | AT1G43640 | 52.281 | 285 | 107 | 7 | 75 | 335 | 84 | 363 | 4.46e-96 | 289 |
| MS.gene00980.t1 | AT1G25280 | 55.556 | 270 | 83 | 7 | 100 | 335 | 1 | 267 | 1.50e-92 | 277 |
| MS.gene00980.t1 | AT1G25280 | 55.556 | 270 | 83 | 7 | 100 | 335 | 1 | 267 | 1.50e-92 | 277 |
| MS.gene00980.t1 | AT1G53320 | 53.558 | 267 | 95 | 4 | 74 | 335 | 137 | 379 | 9.61e-90 | 273 |
| MS.gene00980.t1 | AT1G47270 | 53.731 | 268 | 97 | 5 | 76 | 335 | 140 | 388 | 5.10e-89 | 272 |
| MS.gene00980.t1 | AT1G47270 | 53.731 | 268 | 97 | 5 | 76 | 335 | 165 | 413 | 7.75e-89 | 272 |
| MS.gene00980.t1 | AT1G47270 | 53.731 | 268 | 97 | 5 | 76 | 335 | 164 | 412 | 7.94e-89 | 272 |
| MS.gene00980.t1 | AT1G61940 | 35.565 | 239 | 92 | 10 | 42 | 279 | 1 | 178 | 7.78e-25 | 101 |
Find 86 sgRNAs with CRISPR-Local
Find 244 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GACAAGATTATTCTGCAATT+TGG | 0.212541 | 2.3:+66782204 | MS.gene00980:CDS |
| ATACCCTATTTCGGCATTTC+AGG | 0.216986 | 2.3:+66782263 | MS.gene00980:CDS |
| AATGCCTGAAATGCCGAAAT+AGG | 0.239475 | 2.3:-66782267 | None:intergenic |
| TGGCGGTTGGCGACAGTTTA+CGG | 0.281341 | 2.3:+66779009 | MS.gene00980:CDS |
| CTCTTATTCACAAGCAATCT+TGG | 0.300510 | 2.3:-66782316 | None:intergenic |
| ATTCTGCAATTTGGAAAAGT+TGG | 0.358632 | 2.3:+66782213 | MS.gene00980:CDS |
| CTGGTGGCTTCCGCAGAAAA+TGG | 0.369954 | 2.3:+66782162 | MS.gene00980:CDS |
| GGATTTCCGATACCCTATTT+CGG | 0.372729 | 2.3:+66782254 | MS.gene00980:CDS |
| AGTAGTGGTGGTGGCGGAGA+AGG | 0.373376 | 2.3:+66778977 | MS.gene00980:CDS |
| TCCTTAAGATCAAATTTCCT+TGG | 0.391394 | 2.3:+66781262 | MS.gene00980:intron |
| AACATAGTTGTTGCTTCCCC+TGG | 0.398674 | 2.3:-66781136 | None:intergenic |
| TAGTTGCCTGTTGGGACCTT+GGG | 0.403395 | 2.3:-66781382 | None:intergenic |
| ACAGTTTACGGCAGAGTTGT+TGG | 0.415866 | 2.3:+66779021 | MS.gene00980:CDS |
| TTCTGCAATTTGGAAAAGTT+GGG | 0.417811 | 2.3:+66782214 | MS.gene00980:CDS |
| TCTCTATCCGGACCTCTTGT+TGG | 0.419329 | 2.3:+66782018 | MS.gene00980:CDS |
| TGATGACGGGAAGTTCCTTC+TGG | 0.420704 | 2.3:+66781047 | MS.gene00980:CDS |
| ATAGTTGCCTGTTGGGACCT+TGG | 0.425411 | 2.3:-66781383 | None:intergenic |
| TTACTAAAAGTCGTTCTACT+AGG | 0.428715 | 2.3:+66781335 | MS.gene00980:CDS |
| AGAATAATCTTGTCGTGTTC+CGG | 0.431735 | 2.3:-66782195 | None:intergenic |
| CCACTGGATAGTTGCCTGTT+GGG | 0.432338 | 2.3:-66781390 | None:intergenic |
| CAGTTTACGGCAGAGTTGTT+GGG | 0.438166 | 2.3:+66779022 | MS.gene00980:CDS |
| ATGCCTGAAATGCCGAAATA+GGG | 0.443678 | 2.3:-66782266 | None:intergenic |
| AAGAACGTTGTTGCGTGTGC+TGG | 0.445764 | 2.3:+66779119 | MS.gene00980:CDS |
| TTGCTCCTGCATGAGGTGGC+TGG | 0.453181 | 2.3:-66781309 | None:intergenic |
| GGCATGAGCAGCTGCAGTGT+TGG | 0.476628 | 2.3:+66782088 | MS.gene00980:CDS |
| TCCGCAGAAAATGGAACAGC+TGG | 0.477339 | 2.3:+66782171 | MS.gene00980:CDS |
| GGGGAAGCAACAACTATGTT+GGG | 0.477342 | 2.3:+66781139 | MS.gene00980:CDS |
| GTTTCACCCAAGGTCCCAAC+AGG | 0.477369 | 2.3:+66781376 | MS.gene00980:CDS |
| TCTTCTCCGAATTGAGGCCT+CGG | 0.497256 | 2.3:+66779076 | MS.gene00980:CDS |
| TGAAGTTCTTCTCCGAATTG+AGG | 0.501294 | 2.3:+66779070 | MS.gene00980:CDS |
| TGGGAAGGATTTGTTTACAA+TGG | 0.502527 | 2.3:+66782233 | MS.gene00980:CDS |
| GACGGCCAGCCACCTCATGC+AGG | 0.508409 | 2.3:+66781304 | MS.gene00980:CDS |
| AGGGGAAGCAACAACTATGT+TGG | 0.508852 | 2.3:+66781138 | MS.gene00980:CDS |
| AGAAAATGGAACAGCTGGAC+CGG | 0.509425 | 2.3:+66782176 | MS.gene00980:CDS |
| TTTATCGCCAACAAGAGGTC+CGG | 0.512577 | 2.3:-66782025 | None:intergenic |
| TAAAAGTCGTTCTACTAGGT+TGG | 0.514151 | 2.3:+66781339 | MS.gene00980:CDS |
| TGCAGCTGCTCATGCCACCT+CGG | 0.519909 | 2.3:-66782081 | None:intergenic |
| AATTAAATGTGCTAGGCTCT+AGG | 0.520129 | 2.3:+66781428 | MS.gene00980:CDS |
| ACAACTATGTTGGGAAATTG+AGG | 0.521031 | 2.3:+66781148 | MS.gene00980:CDS |
| TAGACGCAGATGATATGTCC+AGG | 0.522084 | 2.3:+66781118 | MS.gene00980:CDS |
| GTGGTAGAGAACTCTCTATC+CGG | 0.528357 | 2.3:+66782006 | MS.gene00980:CDS |
| ATGACACAGTGCATTCTCCT+TGG | 0.528561 | 2.3:-66781862 | None:intergenic |
| TAGGTTGGTGAATCTAAAGC+AGG | 0.531070 | 2.3:+66781354 | MS.gene00980:CDS |
| TCATGTCTTCGATTATGTTG+CGG | 0.535725 | 2.3:-66778938 | None:intergenic |
| TTCGATTGAAGAGGATGGAA+TGG | 0.537253 | 2.3:-66781890 | None:intergenic |
| AGATAGTGAACTTTGTTCCA+AGG | 0.538026 | 2.3:-66781279 | None:intergenic |
| TGTCCTCCGAGGCCTCAATT+CGG | 0.540412 | 2.3:-66779082 | None:intergenic |
| ATTCAGCGCTAGGTGATGAC+GGG | 0.542238 | 2.3:+66781034 | MS.gene00980:intron |
| AGAGAAAACTCAGTTTGTGT+AGG | 0.543872 | 2.3:-66781928 | None:intergenic |
| AATTCAGCGCTAGGTGATGA+CGG | 0.546541 | 2.3:+66781033 | MS.gene00980:intron |
| AAGGAGAATGCACTGTGTCA+TGG | 0.546764 | 2.3:+66781864 | MS.gene00980:CDS |
| ATGATATAATCTGTGCATGT+AGG | 0.547626 | 2.3:-66781090 | None:intergenic |
| GCCACTGGATAGTTGCCTGT+TGG | 0.548446 | 2.3:-66781391 | None:intergenic |
| TCATATGAGATGTGAGCCAC+TGG | 0.549162 | 2.3:-66781406 | None:intergenic |
| TGTGTAGGAGCTACGCCACC+TGG | 0.549577 | 2.3:-66781913 | None:intergenic |
| GCAATTTGGAAAAGTTGGGA+AGG | 0.553649 | 2.3:+66782218 | MS.gene00980:CDS |
| ACTTCACGCAGAAGCTCTTG+TGG | 0.562675 | 2.3:-66779053 | None:intergenic |
| CCATCCTCTTCAATCGAACC+AGG | 0.562739 | 2.3:+66781895 | MS.gene00980:CDS |
| CACGCAACAACGTTCTTCCT+CGG | 0.565317 | 2.3:-66779113 | None:intergenic |
| GGCGGAGAAGGAAGAGAAAG+TGG | 0.570148 | 2.3:+66778989 | MS.gene00980:CDS |
| TCATATGAATTAAATGTGCT+AGG | 0.570586 | 2.3:+66781421 | MS.gene00980:CDS |
| CCTGGTTCGATTGAAGAGGA+TGG | 0.573458 | 2.3:-66781895 | None:intergenic |
| TACATTTGCGTGCAGCCAGA+AGG | 0.580300 | 2.3:-66781062 | None:intergenic |
| TGGACGGGTGACAATTGCCT+CGG | 0.581243 | 2.3:+66782125 | MS.gene00980:CDS |
| AAGGAAGAGAAAGTGGCGGT+TGG | 0.582497 | 2.3:+66778996 | MS.gene00980:CDS |
| ATCGCAAAGAGTAGTGGTGG+TGG | 0.589679 | 2.3:+66778968 | MS.gene00980:CDS |
| CGGAGGACACGTGGCCGCCG+AGG | 0.594437 | 2.3:+66779096 | MS.gene00980:CDS |
| GCAAAGAGTAGTGGTGGTGG+CGG | 0.599034 | 2.3:+66778971 | MS.gene00980:CDS |
| CTTGTTGGCGATAAAAGAGA+TGG | 0.602960 | 2.3:+66782033 | MS.gene00980:CDS |
| GAAATGCCGAAATAGGGTAT+CGG | 0.603573 | 2.3:-66782260 | None:intergenic |
| CCGATCAAAATCAAATCGTG+TGG | 0.606213 | 2.3:+66781987 | MS.gene00980:CDS |
| TTGAGGCCTCGGAGGACACG+TGG | 0.607574 | 2.3:+66779087 | MS.gene00980:CDS |
| GCCACCTGGTTCGATTGAAG+AGG | 0.610396 | 2.3:-66781899 | None:intergenic |
| AGACGCAGATGATATGTCCA+GGG | 0.615218 | 2.3:+66781119 | MS.gene00980:CDS |
| ATCAAGATCGCAAAGAGTAG+TGG | 0.616284 | 2.3:+66778962 | MS.gene00980:CDS |
| ACAAAGTTCACTATCTATGA+CGG | 0.627271 | 2.3:+66781286 | MS.gene00980:CDS |
| TCTAAAGCAGGTTTCACCCA+AGG | 0.631576 | 2.3:+66781366 | MS.gene00980:CDS |
| TCTCCGAATTGAGGCCTCGG+AGG | 0.639401 | 2.3:+66779079 | MS.gene00980:CDS |
| AAGATCGCAAAGAGTAGTGG+TGG | 0.644592 | 2.3:+66778965 | MS.gene00980:CDS |
| CGGCGGCCACGTGTCCTCCG+AGG | 0.663112 | 2.3:-66779093 | None:intergenic |
| TCTTGGTATCAAAGCTGCTG+AGG | 0.664183 | 2.3:-66782299 | None:intergenic |
| CCCAACAGGCAACTATCCAG+TGG | 0.669323 | 2.3:+66781390 | MS.gene00980:CDS |
| TCCTCTTCAATCGAACCAGG+TGG | 0.710835 | 2.3:+66781898 | MS.gene00980:CDS |
| GACGCAGATGATATGTCCAG+GGG | 0.717675 | 2.3:+66781120 | MS.gene00980:CDS |
| GCAACAACGTTCTTCCTCGG+CGG | 0.717767 | 2.3:-66779110 | None:intergenic |
| GGAGAAGGAAGAGAAAGTGG+CGG | 0.735942 | 2.3:+66778992 | MS.gene00980:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATGTAATACTAAATTACTA+AGG | - | chr2.3:66780764-66780783 | None:intergenic | 15.0% |
| !! | ATATAATTATGTGGATATAA+TGG | - | chr2.3:66780047-66780066 | None:intergenic | 15.0% |
| !! | ATATAGAACATATAATTATG+TGG | - | chr2.3:66780056-66780075 | None:intergenic | 15.0% |
| !! | GCAAAAATATAAAACAATAA+CGG | - | chr2.3:66781202-66781221 | None:intergenic | 15.0% |
| !! | TTAAAAAAGTGATTTATGTT+TGG | + | chr2.3:66779371-66779390 | MS.gene00980:intron | 15.0% |
| !! | TTAAGGAAGAATAAAAAAAA+AGG | - | chr2.3:66781249-66781268 | None:intergenic | 15.0% |
| !! | AAACAAATAATATGTTTGAG+TGG | - | chr2.3:66780894-66780913 | None:intergenic | 20.0% |
| !! | AACTTAATATCACAATTTAG+CGG | - | chr2.3:66780096-66780115 | None:intergenic | 20.0% |
| !! | ACCAAGATAAACATAAAATT+TGG | - | chr2.3:66779624-66779643 | None:intergenic | 20.0% |
| !! | ATAAAAATAACAGATCCAAT+GGG | - | chr2.3:66779888-66779907 | None:intergenic | 20.0% |
| !! | ATTGTTTAGATATTGTGTAA+AGG | + | chr2.3:66779422-66779441 | MS.gene00980:intron | 20.0% |
| !! | ATTTAGCATGATTAATTGTT+TGG | + | chr2.3:66779526-66779545 | MS.gene00980:intron | 20.0% |
| !! | TACTTAATAGAGTTACATAT+TGG | - | chr2.3:66779808-66779827 | None:intergenic | 20.0% |
| !! | TATAAAAATAACAGATCCAA+TGG | - | chr2.3:66779889-66779908 | None:intergenic | 20.0% |
| !!! | ACCAAATTTTATGTTTATCT+TGG | + | chr2.3:66779620-66779639 | MS.gene00980:intron | 20.0% |
| !!! | ATGTTATTAATGGATAATGT+AGG | + | chr2.3:66779991-66780010 | MS.gene00980:intron | 20.0% |
| !!! | TGTTATTAATGGATAATGTA+GGG | + | chr2.3:66779992-66780011 | MS.gene00980:intron | 20.0% |
| ! | AAAACCTGTTTAACAGAAAT+GGG | - | chr2.3:66779218-66779237 | None:intergenic | 25.0% |
| ! | ATGATGATTGAATATGACTA+TGG | + | chr2.3:66780722-66780741 | MS.gene00980:intron | 25.0% |
| ! | ATGATTAATTGTTTGGATGA+GGG | + | chr2.3:66779533-66779552 | MS.gene00980:intron | 25.0% |
| ! | CATATCAACAACAAAGAATA+TGG | - | chr2.3:66780572-66780591 | None:intergenic | 25.0% |
| ! | CCATATTCTCAAATTATTAC+CGG | + | chr2.3:66780460-66780479 | MS.gene00980:intron | 25.0% |
| ! | GTGAGTATACAATTAATCTT+TGG | + | chr2.3:66780930-66780949 | MS.gene00980:intron | 25.0% |
| ! | TAATTGAATGTAACATGTGT+CGG | - | chr2.3:66780438-66780457 | None:intergenic | 25.0% |
| ! | TACCAAATAACAAAGAAACA+AGG | - | chr2.3:66779580-66779599 | None:intergenic | 25.0% |
| ! | TATGGAAGTAATTGAGAATA+TGG | - | chr2.3:66780536-66780555 | None:intergenic | 25.0% |
| ! | TATGTTCTATATTATCTGAG+AGG | + | chr2.3:66780064-66780083 | MS.gene00980:intron | 25.0% |
| ! | TCATATGAATTAAATGTGCT+AGG | + | chr2.3:66781421-66781440 | MS.gene00980:CDS | 25.0% |
| ! | TGTCGAACAAAATAAAAGTA+TGG | - | chr2.3:66781736-66781755 | None:intergenic | 25.0% |
| !! | AATTTTCCTAACCAAAAAGT+AGG | + | chr2.3:66780593-66780612 | MS.gene00980:intron | 25.0% |
| !! | AGCACAAAATATCTAGAATT+AGG | - | chr2.3:66780024-66780043 | None:intergenic | 25.0% |
| !! | GCTAGGATATAATTATGTTT+TGG | + | chr2.3:66780343-66780362 | MS.gene00980:intron | 25.0% |
| !! | TGGATTTGGTTGTTTATAAT+GGG | + | chr2.3:66779457-66779476 | MS.gene00980:intron | 25.0% |
| !! | TTGGATTTGGTTGTTTATAA+TGG | + | chr2.3:66779456-66779475 | MS.gene00980:intron | 25.0% |
| !! | TTTACCTAACATGTTTCTAT+TGG | + | chr2.3:66780803-66780822 | MS.gene00980:intron | 25.0% |
| !! | TTTCTATTGGCGAATAATTT+TGG | + | chr2.3:66780816-66780835 | MS.gene00980:intron | 25.0% |
| !!! | AATTATGTTTTGGTTGAGTA+CGG | + | chr2.3:66780353-66780372 | MS.gene00980:intron | 25.0% |
| !!! | AGTGTGGAAAATTGTTATTT+TGG | + | chr2.3:66779961-66779980 | MS.gene00980:intron | 25.0% |
| !!! | TACCTTGTTTCTTTGTTATT+TGG | + | chr2.3:66779575-66779594 | MS.gene00980:intron | 25.0% |
| !!! | TGATTTTGTAGCATTGATTT+TGG | + | chr2.3:66779348-66779367 | MS.gene00980:intron | 25.0% |
| !!! | TGGAAAATTGTTATTTTGGT+TGG | + | chr2.3:66779965-66779984 | MS.gene00980:intron | 25.0% |
| !!! | TTTGATTTTGATCGGAAAAA+AGG | - | chr2.3:66781982-66782001 | None:intergenic | 25.0% |
| AAACCTGTTTAACAGAAATG+GGG | - | chr2.3:66779217-66779236 | None:intergenic | 30.0% | |
| AAAGCGATAGAAAATGAGAA+TGG | - | chr2.3:66779249-66779268 | None:intergenic | 30.0% | |
| AATAATATGTTTGAGTGGAC+CGG | - | chr2.3:66780889-66780908 | None:intergenic | 30.0% | |
| ACAAAGTTCACTATCTATGA+CGG | + | chr2.3:66781286-66781305 | MS.gene00980:CDS | 30.0% | |
| ACTATCTATATATTGCAAGC+AGG | + | chr2.3:66781836-66781855 | MS.gene00980:intron | 30.0% | |
| ATGATATAATCTGTGCATGT+AGG | - | chr2.3:66781093-66781112 | None:intergenic | 30.0% | |
| ATTCTGCAATTTGGAAAAGT+TGG | + | chr2.3:66782213-66782232 | MS.gene00980:CDS | 30.0% | |
| ATTTATGTTTGGATGCTTTG+AGG | + | chr2.3:66779382-66779401 | MS.gene00980:intron | 30.0% | |
| CAACTTGTGAAACTTTACAT+GGG | + | chr2.3:66780119-66780138 | MS.gene00980:intron | 30.0% | |
| CATGATTAATTGTTTGGATG+AGG | + | chr2.3:66779532-66779551 | MS.gene00980:intron | 30.0% | |
| CCGGTAATAATTTGAGAATA+TGG | - | chr2.3:66780463-66780482 | None:intergenic | 30.0% | |
| CTATCTATATATTGCAAGCA+GGG | + | chr2.3:66781837-66781856 | MS.gene00980:intron | 30.0% | |
| GAAAACCTGTTTAACAGAAA+TGG | - | chr2.3:66779219-66779238 | None:intergenic | 30.0% | |
| GAATATGGAAAACACAAACA+CGG | - | chr2.3:66780521-66780540 | None:intergenic | 30.0% | |
| GACAAGATTATTCTGCAATT+TGG | + | chr2.3:66782204-66782223 | MS.gene00980:CDS | 30.0% | |
| GTAAATGTAAACATACACAG+AGG | - | chr2.3:66779866-66779885 | None:intergenic | 30.0% | |
| GTATGTTTACATTTACCCAT+TGG | + | chr2.3:66779870-66779889 | MS.gene00980:intron | 30.0% | |
| TAAAAGACATTGAAATGACC+AGG | + | chr2.3:66780162-66780181 | MS.gene00980:intron | 30.0% | |
| TAATAACCAGAAACAAAACC+TGG | - | chr2.3:66780183-66780202 | None:intergenic | 30.0% | |
| TATACTATTCAACACCAAAG+AGG | - | chr2.3:66780662-66780681 | None:intergenic | 30.0% | |
| TATCTATATATTGCAAGCAG+GGG | + | chr2.3:66781838-66781857 | MS.gene00980:intron | 30.0% | |
| TATGCTTGTGTTGAAAAACA+AGG | + | chr2.3:66782056-66782075 | MS.gene00980:CDS | 30.0% | |
| TCAACTTGTGAAACTTTACA+TGG | + | chr2.3:66780118-66780137 | MS.gene00980:intron | 30.0% | |
| TCCAAGGAAATTTGATCTTA+AGG | - | chr2.3:66781266-66781285 | None:intergenic | 30.0% | |
| TCCTTAAGATCAAATTTCCT+TGG | + | chr2.3:66781262-66781281 | MS.gene00980:intron | 30.0% | |
| TCTATATTATCTGAGAGGTT+GGG | + | chr2.3:66780069-66780088 | MS.gene00980:intron | 30.0% | |
| TGAAGGTTTAGATCTCAAAA+AGG | - | chr2.3:66780994-66781013 | None:intergenic | 30.0% | |
| TTACTAAAAGTCGTTCTACT+AGG | + | chr2.3:66781335-66781354 | MS.gene00980:CDS | 30.0% | |
| TTCTATATTATCTGAGAGGT+TGG | + | chr2.3:66780068-66780087 | MS.gene00980:intron | 30.0% | |
| TTCTGCAATTTGGAAAAGTT+GGG | + | chr2.3:66782214-66782233 | MS.gene00980:CDS | 30.0% | |
| TTGATGCATTGAGGTTAATT+GGG | + | chr2.3:66779490-66779509 | MS.gene00980:intron | 30.0% | |
| TTTGATGCATTGAGGTTAAT+TGG | + | chr2.3:66779489-66779508 | MS.gene00980:intron | 30.0% | |
| ! | GGTCATTTCAATGTCTTTTA+AGG | - | chr2.3:66780162-66780181 | None:intergenic | 30.0% |
| ! | TGAGATCTAAACCTTCATTT+TGG | + | chr2.3:66780997-66781016 | MS.gene00980:intron | 30.0% |
| ! | TGGTTGGTCAATGTTATTAA+TGG | + | chr2.3:66779981-66780000 | MS.gene00980:intron | 30.0% |
| !! | AGATTTTGTTTGATGCATTG+AGG | + | chr2.3:66779481-66779500 | MS.gene00980:intron | 30.0% |
| !! | CTTACTTTTATCACAACGAT+CGG | + | chr2.3:66781572-66781591 | MS.gene00980:intron | 30.0% |
| !! | TAATGGATAATGTAGGGTTT+TGG | + | chr2.3:66779998-66780017 | MS.gene00980:intron | 30.0% |
| !! | TACATTGTTTTACAGCACTA+TGG | + | chr2.3:66780778-66780797 | MS.gene00980:intron | 30.0% |
| !! | TGTTGGTGCTTAAATTTTCA+TGG | + | chr2.3:66782105-66782124 | MS.gene00980:CDS | 30.0% |
| !! | TTGGTGTTGAATAGTATACA+TGG | + | chr2.3:66780664-66780683 | MS.gene00980:intron | 30.0% |
| !!! | ATTATGTTTTGGTTGAGTAC+GGG | + | chr2.3:66780354-66780373 | MS.gene00980:intron | 30.0% |
| !!! | ATTTTTGCTGTTTATCAGTG+TGG | + | chr2.3:66781214-66781233 | MS.gene00980:intron | 30.0% |
| AATGCTTTATAAAGCGCAAC+CGG | + | chr2.3:66780867-66780886 | MS.gene00980:intron | 35.0% | |
| AATTAAATGTGCTAGGCTCT+AGG | + | chr2.3:66781428-66781447 | MS.gene00980:CDS | 35.0% | |
| ACAACTATGTTGGGAAATTG+AGG | + | chr2.3:66781148-66781167 | MS.gene00980:CDS | 35.0% | |
| ACACTGACACTTCATATTGA+AGG | + | chr2.3:66780383-66780402 | MS.gene00980:intron | 35.0% | |
| AGAAGCAATGACCAAAATGA+AGG | - | chr2.3:66781011-66781030 | None:intergenic | 35.0% | |
| AGAATAATCTTGTCGTGTTC+CGG | - | chr2.3:66782198-66782217 | None:intergenic | 35.0% | |
| AGAGAAAACTCAGTTTGTGT+AGG | - | chr2.3:66781931-66781950 | None:intergenic | 35.0% | |
| AGATAGTGAACTTTGTTCCA+AGG | - | chr2.3:66781282-66781301 | None:intergenic | 35.0% | |
| ATCTATATATTGCAAGCAGG+GGG | + | chr2.3:66781839-66781858 | MS.gene00980:intron | 35.0% | |
| CACAAACAAGGGAATCTTAA+GGG | - | chr2.3:66780695-66780714 | None:intergenic | 35.0% | |
| CATAACTTTCGCAACTACAA+TGG | - | chr2.3:66779740-66779759 | None:intergenic | 35.0% | |
| CGATCGTTGTGATAAAAGTA+AGG | - | chr2.3:66781574-66781593 | None:intergenic | 35.0% | |
| CGGTAAGCTAAATAGTTTAC+GGG | - | chr2.3:66781784-66781803 | None:intergenic | 35.0% | |
| GATCGGAAAAAAGGAAACAA+GGG | - | chr2.3:66781973-66781992 | None:intergenic | 35.0% | |
| GCGGTAAGCTAAATAGTTTA+CGG | - | chr2.3:66781785-66781804 | None:intergenic | 35.0% | |
| GTGATCATAGCTGAAATTTC+AGG | - | chr2.3:66779191-66779210 | None:intergenic | 35.0% | |
| TAAAAGTCGTTCTACTAGGT+TGG | + | chr2.3:66781339-66781358 | MS.gene00980:CDS | 35.0% | |
| TCAAATACTCCTCTTACTAC+AGG | + | chr2.3:66780239-66780258 | MS.gene00980:intron | 35.0% | |
| TCATGTCTTCGATTATGTTG+CGG | - | chr2.3:66778941-66778960 | None:intergenic | 35.0% | |
| TGATCGGAAAAAAGGAAACA+AGG | - | chr2.3:66781974-66781993 | None:intergenic | 35.0% | |
| TGTAAAGGACCAAAATGTGT+TGG | + | chr2.3:66779437-66779456 | MS.gene00980:intron | 35.0% | |
| TTCGCCAATAGAAACATGTT+AGG | - | chr2.3:66780810-66780829 | None:intergenic | 35.0% | |
| TTCTATCGCTTTCCTCATAT+GGG | + | chr2.3:66779257-66779276 | MS.gene00980:intron | 35.0% | |
| TTTCCCCATTTCTGTTAAAC+AGG | + | chr2.3:66779211-66779230 | MS.gene00980:intron | 35.0% | |
| TTTCTATCGCTTTCCTCATA+TGG | + | chr2.3:66779256-66779275 | MS.gene00980:intron | 35.0% | |
| ! | AAACGTTCTTTTTCTCAGTG+TGG | + | chr2.3:66779945-66779964 | MS.gene00980:intron | 35.0% |
| ! | CAACCAAATCCAACACATTT+TGG | - | chr2.3:66779449-66779468 | None:intergenic | 35.0% |
| ! | GGTGCTTAAATTTTCATGGA+CGG | + | chr2.3:66782109-66782128 | MS.gene00980:CDS | 35.0% |
| ! | GTGCTTAAATTTTCATGGAC+GGG | + | chr2.3:66782110-66782129 | MS.gene00980:CDS | 35.0% |
| ! | TGAGATATCATCTACTGGTT+TGG | + | chr2.3:66780321-66780340 | MS.gene00980:intron | 35.0% |
| ! | TGGGAAGGATTTGTTTACAA+TGG | + | chr2.3:66782233-66782252 | MS.gene00980:CDS | 35.0% |
| !! | CCACACGATTTGATTTTGAT+CGG | - | chr2.3:66781990-66782009 | None:intergenic | 35.0% |
| !! | TGCGCTTTATAAAGCATTGA+AGG | - | chr2.3:66780865-66780884 | None:intergenic | 35.0% |
| !! | TTTTGACTACAACCCATATG+AGG | - | chr2.3:66779272-66779291 | None:intergenic | 35.0% |
| !!! | AAATGACCAGGTTTTGTTTC+TGG | + | chr2.3:66780174-66780193 | MS.gene00980:intron | 35.0% |
| AATGCCTGAAATGCCGAAAT+AGG | - | chr2.3:66782270-66782289 | None:intergenic | 40.0% | |
| ATACCCTATTTCGGCATTTC+AGG | + | chr2.3:66782263-66782282 | MS.gene00980:CDS | 40.0% | |
| ATAGTTTACGGGTAACGCTT+TGG | - | chr2.3:66781773-66781792 | None:intergenic | 40.0% | |
| ATCAAGATCGCAAAGAGTAG+TGG | + | chr2.3:66778962-66778981 | MS.gene00980:CDS | 40.0% | |
| ATGCCTGAAATGCCGAAATA+GGG | - | chr2.3:66782269-66782288 | None:intergenic | 40.0% | |
| CCACAAACAAGGGAATCTTA+AGG | - | chr2.3:66780696-66780715 | None:intergenic | 40.0% | |
| CCGATCAAAATCAAATCGTG+TGG | + | chr2.3:66781987-66782006 | MS.gene00980:CDS | 40.0% | |
| CTCGGTTAAAAACTTTCAGC+TGG | + | chr2.3:66782143-66782162 | MS.gene00980:CDS | 40.0% | |
| CTTGTTGGCGATAAAAGAGA+TGG | + | chr2.3:66782033-66782052 | MS.gene00980:CDS | 40.0% | |
| GAAATGCCGAAATAGGGTAT+CGG | - | chr2.3:66782263-66782282 | None:intergenic | 40.0% | |
| GCAATTTGGAAAAGTTGGGA+AGG | + | chr2.3:66782218-66782237 | MS.gene00980:CDS | 40.0% | |
| GGACCAAAATGTGTTGGATT+TGG | + | chr2.3:66779443-66779462 | MS.gene00980:intron | 40.0% | |
| GGATTTCCGATACCCTATTT+CGG | + | chr2.3:66782254-66782273 | MS.gene00980:CDS | 40.0% | |
| GGTAAAGTCACACAGATGAT+GGG | + | chr2.3:66781593-66781612 | MS.gene00980:intron | 40.0% | |
| GGTTAAAAACTTTCAGCTGG+TGG | + | chr2.3:66782146-66782165 | MS.gene00980:CDS | 40.0% | |
| GTAAACATACACAGAGGAAC+AGG | - | chr2.3:66779860-66779879 | None:intergenic | 40.0% | |
| GTGTGATTCTCTATTAGGCT+TGG | + | chr2.3:66780297-66780316 | MS.gene00980:intron | 40.0% | |
| TCCTAACCAAAAAGTAGGAG+AGG | + | chr2.3:66780598-66780617 | MS.gene00980:intron | 40.0% | |
| TCTGCGTGTGATTCTCTATT+AGG | + | chr2.3:66780292-66780311 | MS.gene00980:intron | 40.0% | |
| TGAAGTTCTTCTCCGAATTG+AGG | + | chr2.3:66779070-66779089 | MS.gene00980:CDS | 40.0% | |
| TGCTTCTTTAATTCAGCGCT+AGG | + | chr2.3:66781024-66781043 | MS.gene00980:intron | 40.0% | |
| TTCGATTGAAGAGGATGGAA+TGG | - | chr2.3:66781893-66781912 | None:intergenic | 40.0% | |
| TTGGCTGAGATATCATCTAC+TGG | + | chr2.3:66780316-66780335 | MS.gene00980:intron | 40.0% | |
| ! | AAGATTCCCTTGTTTGTGGA+AGG | + | chr2.3:66780697-66780716 | MS.gene00980:intron | 40.0% |
| ! | AGATTCCCTTGTTTGTGGAA+GGG | + | chr2.3:66780698-66780717 | MS.gene00980:intron | 40.0% |
| ! | CAGCTGAAAGTTTTTAACCG+AGG | - | chr2.3:66782145-66782164 | None:intergenic | 40.0% |
| ! | CCTTAAGATTCCCTTGTTTG+TGG | + | chr2.3:66780693-66780712 | MS.gene00980:intron | 40.0% |
| ! | GTAAATTTTGCTCCTGCATG+AGG | - | chr2.3:66781319-66781338 | None:intergenic | 40.0% |
| ! | TCTCTTTTATCGCCAACAAG+AGG | - | chr2.3:66782033-66782052 | None:intergenic | 40.0% |
| !! | AACACCAAAGAGGCATCTTA+TGG | - | chr2.3:66780652-66780671 | None:intergenic | 40.0% |
| !! | ACTGTTTTGGGCTAATTGAG+TGG | + | chr2.3:66780623-66780642 | MS.gene00980:intron | 40.0% |
| !! | CAACTACAATGGCATCGATA+AGG | - | chr2.3:66779729-66779748 | None:intergenic | 40.0% |
| !! | CTGTTTTGGGCTAATTGAGT+GGG | + | chr2.3:66780624-66780643 | MS.gene00980:intron | 40.0% |
| !! | TAGGTTGGTGAATCTAAAGC+AGG | + | chr2.3:66781354-66781373 | MS.gene00980:CDS | 40.0% |
| !! | TATCATCTACTGGTTTGGCT+AGG | + | chr2.3:66780326-66780345 | MS.gene00980:intron | 40.0% |
| !!! | ACCTCTCCTACTTTTTGGTT+AGG | - | chr2.3:66780602-66780621 | None:intergenic | 40.0% |
| AAGATCGCAAAGAGTAGTGG+TGG | + | chr2.3:66778965-66778984 | MS.gene00980:CDS | 45.0% | |
| AAGGAGAATGCACTGTGTCA+TGG | + | chr2.3:66781864-66781883 | MS.gene00980:CDS | 45.0% | |
| AATTCAGCGCTAGGTGATGA+CGG | + | chr2.3:66781033-66781052 | MS.gene00980:intron | 45.0% | |
| ACAGTTTACGGCAGAGTTGT+TGG | + | chr2.3:66779021-66779040 | MS.gene00980:CDS | 45.0% | |
| ACCGCGCACTCTTCATATAT+TGG | + | chr2.3:66781800-66781819 | MS.gene00980:intron | 45.0% | |
| AGAAAATGGAACAGCTGGAC+CGG | + | chr2.3:66782176-66782195 | MS.gene00980:CDS | 45.0% | |
| AGACGCAGATGATATGTCCA+GGG | + | chr2.3:66781119-66781138 | MS.gene00980:CDS | 45.0% | |
| AGGGGAAGCAACAACTATGT+TGG | + | chr2.3:66781138-66781157 | MS.gene00980:CDS | 45.0% | |
| ATCATGCCCTTCCACAAACA+AGG | - | chr2.3:66780707-66780726 | None:intergenic | 45.0% | |
| ATGACACAGTGCATTCTCCT+TGG | - | chr2.3:66781865-66781884 | None:intergenic | 45.0% | |
| CAGTTTACGGCAGAGTTGTT+GGG | + | chr2.3:66779022-66779041 | MS.gene00980:CDS | 45.0% | |
| CATTGAAGGAGATTCTCCCT+TGG | - | chr2.3:66780851-66780870 | None:intergenic | 45.0% | |
| CGGTAAAGTCACACAGATGA+TGG | + | chr2.3:66781592-66781611 | MS.gene00980:intron | 45.0% | |
| GGGGAAGCAACAACTATGTT+GGG | + | chr2.3:66781139-66781158 | MS.gene00980:CDS | 45.0% | |
| GTGGTAGAGAACTCTCTATC+CGG | + | chr2.3:66782006-66782025 | MS.gene00980:CDS | 45.0% | |
| TAGACGCAGATGATATGTCC+AGG | + | chr2.3:66781118-66781137 | MS.gene00980:CDS | 45.0% | |
| TCATATGAGATGTGAGCCAC+TGG | - | chr2.3:66781409-66781428 | None:intergenic | 45.0% | |
| TCATGCCCTTCCACAAACAA+GGG | - | chr2.3:66780706-66780725 | None:intergenic | 45.0% | |
| TCTTGGTATCAAAGCTGCTG+AGG | - | chr2.3:66782302-66782321 | None:intergenic | 45.0% | |
| TGTTGAAAAACAAGGCTCCG+AGG | + | chr2.3:66782064-66782083 | MS.gene00980:CDS | 45.0% | |
| TTTATCGCCAACAAGAGGTC+CGG | - | chr2.3:66782028-66782047 | None:intergenic | 45.0% | |
| ! | AACATAGTTGTTGCTTCCCC+TGG | - | chr2.3:66781139-66781158 | None:intergenic | 45.0% |
| ! | AATTTTGCTCCTGCATGAGG+TGG | - | chr2.3:66781316-66781335 | None:intergenic | 45.0% |
| ! | ACCTAACCAACGTTTAGCTC+CGG | + | chr2.3:66780268-66780287 | MS.gene00980:intron | 45.0% |
| ! | AGTAGGAGAGGTCACTGTTT+TGG | + | chr2.3:66780610-66780629 | MS.gene00980:intron | 45.0% |
| ! | CTTCATATTGAAGGTGTGCC+CGG | + | chr2.3:66780392-66780411 | MS.gene00980:intron | 45.0% |
| ! | GCCAATATATGAAGAGTGCG+CGG | - | chr2.3:66781804-66781823 | None:intergenic | 45.0% |
| ! | GTAGGAGAGGTCACTGTTTT+GGG | + | chr2.3:66780611-66780630 | MS.gene00980:intron | 45.0% |
| ! | TCCAGCTGTTCCATTTTCTG+CGG | - | chr2.3:66782175-66782194 | None:intergenic | 45.0% |
| ! | TCTAAAGCAGGTTTCACCCA+AGG | + | chr2.3:66781366-66781385 | MS.gene00980:CDS | 45.0% |
| !! | CAGTGACCTCTCCTACTTTT+TGG | - | chr2.3:66780607-66780626 | None:intergenic | 45.0% |
| !! | TGTCGGTGTCATGTTGTTGT+CGG | - | chr2.3:66780421-66780440 | None:intergenic | 45.0% |
| AAGAACGTTGTTGCGTGTGC+TGG | + | chr2.3:66779119-66779138 | MS.gene00980:CDS | 50.0% | |
| AAGGAAGAGAAAGTGGCGGT+TGG | + | chr2.3:66778996-66779015 | MS.gene00980:CDS | 50.0% | |
| ACTTCACGCAGAAGCTCTTG+TGG | - | chr2.3:66779056-66779075 | None:intergenic | 50.0% | |
| ATAGTTGCCTGTTGGGACCT+TGG | - | chr2.3:66781386-66781405 | None:intergenic | 50.0% | |
| ATCGCAAAGAGTAGTGGTGG+TGG | + | chr2.3:66778968-66778987 | MS.gene00980:CDS | 50.0% | |
| ATTCAGCGCTAGGTGATGAC+GGG | + | chr2.3:66781034-66781053 | MS.gene00980:intron | 50.0% | |
| CACGCAACAACGTTCTTCCT+CGG | - | chr2.3:66779116-66779135 | None:intergenic | 50.0% | |
| CCACTGGATAGTTGCCTGTT+GGG | - | chr2.3:66781393-66781412 | None:intergenic | 50.0% | |
| CCATCCTCTTCAATCGAACC+AGG | + | chr2.3:66781895-66781914 | MS.gene00980:CDS | 50.0% | |
| GACGCAGATGATATGTCCAG+GGG | + | chr2.3:66781120-66781139 | MS.gene00980:CDS | 50.0% | |
| GGAGAAGGAAGAGAAAGTGG+CGG | + | chr2.3:66778992-66779011 | MS.gene00980:CDS | 50.0% | |
| GGCTCCATAAGATGCCTCTT+TGG | + | chr2.3:66780645-66780664 | MS.gene00980:intron | 50.0% | |
| GGTAAGCGTCCTGTAGTAAG+AGG | - | chr2.3:66780251-66780270 | None:intergenic | 50.0% | |
| GTCATGTTGTTGTCGGACAC+CGG | - | chr2.3:66780414-66780433 | None:intergenic | 50.0% | |
| TACATTTGCGTGCAGCCAGA+AGG | - | chr2.3:66781065-66781084 | None:intergenic | 50.0% | |
| TAGAGAATCACACGCAGAGC+CGG | - | chr2.3:66780290-66780309 | None:intergenic | 50.0% | |
| TAGTTGCCTGTTGGGACCTT+GGG | - | chr2.3:66781385-66781404 | None:intergenic | 50.0% | |
| TCATGTTGTTGTCGGACACC+GGG | - | chr2.3:66780413-66780432 | None:intergenic | 50.0% | |
| TCCGCAGAAAATGGAACAGC+TGG | + | chr2.3:66782171-66782190 | MS.gene00980:CDS | 50.0% | |
| TCCTCTTCAATCGAACCAGG+TGG | + | chr2.3:66781898-66781917 | MS.gene00980:CDS | 50.0% | |
| TCTCTATCCGGACCTCTTGT+TGG | + | chr2.3:66782018-66782037 | MS.gene00980:CDS | 50.0% | |
| TCTTCTCCGAATTGAGGCCT+CGG | + | chr2.3:66779076-66779095 | MS.gene00980:CDS | 50.0% | |
| TGAAAAACAAGGCTCCGAGG+TGG | + | chr2.3:66782067-66782086 | MS.gene00980:CDS | 50.0% | |
| ! | CCTGGTTCGATTGAAGAGGA+TGG | - | chr2.3:66781898-66781917 | None:intergenic | 50.0% |
| !! | AATTTTGGCAGCCTGGTCCA+AGG | + | chr2.3:66780831-66780850 | MS.gene00980:intron | 50.0% |
| !! | ATTTTGGCAGCCTGGTCCAA+GGG | + | chr2.3:66780832-66780851 | MS.gene00980:intron | 50.0% |
| !! | GGCGAATAATTTTGGCAGCC+TGG | + | chr2.3:66780824-66780843 | MS.gene00980:intron | 50.0% |
| !! | TGATGACGGGAAGTTCCTTC+TGG | + | chr2.3:66781047-66781066 | MS.gene00980:CDS | 50.0% |
| AGACACTAACACGTCGACGC+CGG | - | chr2.3:66780482-66780501 | None:intergenic | 55.0% | |
| AGGAGATTCTCCCTTGGACC+AGG | - | chr2.3:66780845-66780864 | None:intergenic | 55.0% | |
| ATATTGCAAGCAGGGGGCCA+AGG | + | chr2.3:66781845-66781864 | MS.gene00980:intron | 55.0% | |
| CCCAACAGGCAACTATCCAG+TGG | + | chr2.3:66781390-66781409 | MS.gene00980:CDS | 55.0% | |
| CTGGTGGCTTCCGCAGAAAA+TGG | + | chr2.3:66782162-66782181 | MS.gene00980:CDS | 55.0% | |
| GCAACAACGTTCTTCCTCGG+CGG | - | chr2.3:66779113-66779132 | None:intergenic | 55.0% | |
| GCCACTGGATAGTTGCCTGT+TGG | - | chr2.3:66781394-66781413 | None:intergenic | 55.0% | |
| GGCGGAGAAGGAAGAGAAAG+TGG | + | chr2.3:66778989-66779008 | MS.gene00980:CDS | 55.0% | |
| GTGCTGGAGTGTGTAGGAGT+TGG | + | chr2.3:66779135-66779154 | MS.gene00980:intron | 55.0% | |
| GTTTCACCCAAGGTCCCAAC+AGG | + | chr2.3:66781376-66781395 | MS.gene00980:CDS | 55.0% | |
| TGGACGGGTGACAATTGCCT+CGG | + | chr2.3:66782125-66782144 | MS.gene00980:CDS | 55.0% | |
| TGGCGGTTGGCGACAGTTTA+CGG | + | chr2.3:66779009-66779028 | MS.gene00980:CDS | 55.0% | |
| TGTCCTCCGAGGCCTCAATT+CGG | - | chr2.3:66779085-66779104 | None:intergenic | 55.0% | |
| TTGCGTGTGCTGGAGTGTGT+AGG | + | chr2.3:66779129-66779148 | MS.gene00980:intron | 55.0% | |
| ! | GCCACCTGGTTCGATTGAAG+AGG | - | chr2.3:66781902-66781921 | None:intergenic | 55.0% |
| ! | GCCGGAGCTAAACGTTGGTT+AGG | - | chr2.3:66780272-66780291 | None:intergenic | 55.0% |
| !! | GCAAAGAGTAGTGGTGGTGG+CGG | + | chr2.3:66778971-66778990 | MS.gene00980:CDS | 55.0% |
| GCAGAGCCGGAGCTAAACGT+TGG | - | chr2.3:66780277-66780296 | None:intergenic | 60.0% | |
| GGCATGAGCAGCTGCAGTGT+TGG | + | chr2.3:66782088-66782107 | MS.gene00980:CDS | 60.0% | |
| TCTCCGAATTGAGGCCTCGG+AGG | + | chr2.3:66779079-66779098 | MS.gene00980:CDS | 60.0% | |
| TGCAGCTGCTCATGCCACCT+CGG | - | chr2.3:66782084-66782103 | None:intergenic | 60.0% | |
| TGTGTAGGAGCTACGCCACC+TGG | - | chr2.3:66781916-66781935 | None:intergenic | 60.0% | |
| TTGCTCCTGCATGAGGTGGC+TGG | - | chr2.3:66781312-66781331 | None:intergenic | 60.0% | |
| !! | AGTAGTGGTGGTGGCGGAGA+AGG | + | chr2.3:66778977-66778996 | MS.gene00980:CDS | 60.0% |
| TTGAGGCCTCGGAGGACACG+TGG | + | chr2.3:66779087-66779106 | MS.gene00980:CDS | 65.0% | |
| GACGGCCAGCCACCTCATGC+AGG | + | chr2.3:66781304-66781323 | MS.gene00980:CDS | 70.0% | |
| ! | CGGAGGACACGTGGCCGCCG+AGG | + | chr2.3:66779096-66779115 | MS.gene00980:CDS | 80.0% |
| ! | CGGCGGCCACGTGTCCTCCG+AGG | - | chr2.3:66779096-66779115 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.3 | gene | 66778927 | 66782335 | 66778927 | ID=MS.gene00980 |
| chr2.3 | mRNA | 66778927 | 66782335 | 66778927 | ID=MS.gene00980.t1;Parent=MS.gene00980 |
| chr2.3 | exon | 66778927 | 66779146 | 66778927 | ID=MS.gene00980.t1.exon1;Parent=MS.gene00980.t1 |
| chr2.3 | CDS | 66778927 | 66779146 | 66778927 | ID=cds.MS.gene00980.t1;Parent=MS.gene00980.t1 |
| chr2.3 | exon | 66781040 | 66781169 | 66781040 | ID=MS.gene00980.t1.exon2;Parent=MS.gene00980.t1 |
| chr2.3 | CDS | 66781040 | 66781169 | 66781040 | ID=cds.MS.gene00980.t1;Parent=MS.gene00980.t1 |
| chr2.3 | exon | 66781270 | 66781449 | 66781270 | ID=MS.gene00980.t1.exon3;Parent=MS.gene00980.t1 |
| chr2.3 | CDS | 66781270 | 66781449 | 66781270 | ID=cds.MS.gene00980.t1;Parent=MS.gene00980.t1 |
| chr2.3 | exon | 66781858 | 66782335 | 66781858 | ID=MS.gene00980.t1.exon4;Parent=MS.gene00980.t1 |
| chr2.3 | CDS | 66781858 | 66782335 | 66781858 | ID=cds.MS.gene00980.t1;Parent=MS.gene00980.t1 |
| Gene Sequence |
| Protein sequence |
