AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene009957

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene009957.t1 MTR_5g069030 93.770 626 31 4 1 620 1 624 0.0 1189
MS.gene009957.t1 MTR_3g093050 48.799 666 236 16 1 634 1 593 0.0 555
MS.gene009957.t1 MTR_3g093050 47.820 665 271 15 1 634 1 620 0.0 541
MS.gene009957.t1 MTR_3g093040 69.545 220 60 1 16 235 99 311 2.73e-111 337
MS.gene009957.t1 MTR_6g477900 46.957 230 108 3 25 240 6 235 1.96e-58 196
MS.gene009957.t1 MTR_3g064580 62.500 152 56 1 25 175 6 157 4.34e-58 207
MS.gene009957.t1 MTR_2g064090 52.632 190 77 3 25 208 6 188 1.14e-57 198
MS.gene009957.t1 MTR_5g076850 61.589 151 58 0 25 175 6 156 1.11e-56 203
MS.gene009957.t1 MTR_5g014300 54.321 162 64 3 25 179 6 164 2.30e-52 183
MS.gene009957.t1 MTR_3g070030 54.140 157 67 2 24 177 18 172 2.33e-51 181
MS.gene009957.t1 MTR_8g063550 50.955 157 77 0 20 176 1 157 2.35e-51 181
MS.gene009957.t1 MTR_8g023860 54.839 155 61 4 21 172 8 156 7.53e-51 182
MS.gene009957.t1 MTR_0036s0150 55.414 157 67 3 20 175 1 155 9.65e-51 184
MS.gene009957.t1 MTR_8g063550 50.955 157 77 0 20 176 1 157 1.02e-50 182
MS.gene009957.t1 MTR_8g063550 50.955 157 77 0 20 176 1 157 1.38e-50 181
MS.gene009957.t1 MTR_2g086880 53.503 157 64 3 16 172 10 157 3.11e-50 182
MS.gene009957.t1 MTR_2g086880 53.503 157 64 3 16 172 10 157 4.16e-50 184
MS.gene009957.t1 MTR_8g023840 57.616 151 55 4 25 172 11 155 4.76e-50 179
MS.gene009957.t1 MTR_3g096140 38.258 264 136 4 28 278 10 259 4.90e-50 175
MS.gene009957.t1 MTR_4g036030 52.229 157 72 3 21 176 3 157 1.31e-49 176
MS.gene009957.t1 MTR_4g098630 54.717 159 67 3 25 179 6 163 3.02e-49 174
MS.gene009957.t1 MTR_5g012080 51.899 158 73 3 21 176 3 159 3.39e-49 175
MS.gene009957.t1 MTR_3g096140 38.346 266 133 4 28 278 10 259 9.15e-49 174
MS.gene009957.t1 MTR_1g090723 53.691 149 68 1 28 175 11 159 1.58e-48 180
MS.gene009957.t1 MTR_1g090723 54.362 149 66 2 28 175 11 158 2.15e-48 179
MS.gene009957.t1 MTR_1g090723 54.362 149 66 2 28 175 11 158 3.96e-48 179
MS.gene009957.t1 MTR_8g076110 47.826 161 81 2 25 184 6 164 9.70e-48 170
MS.gene009957.t1 MTR_4g108760 53.254 169 68 4 15 175 2 167 1.23e-47 171
MS.gene009957.t1 MTR_4g101680 47.879 165 83 2 21 184 3 165 1.25e-47 171
MS.gene009957.t1 MTR_1g097300 50.286 175 81 1 1 175 1 169 2.97e-47 175
MS.gene009957.t1 MTR_3g435150 43.723 231 108 6 15 229 2 226 3.43e-47 168
MS.gene009957.t1 MTR_3g096920 49.171 181 75 5 25 200 7 175 7.28e-47 167
MS.gene009957.t1 MTR_1g090720 52.830 159 69 1 25 177 42 200 7.65e-47 172
MS.gene009957.t1 MTR_8g093580 47.134 157 83 0 20 176 1 157 8.55e-47 172
MS.gene009957.t1 MTR_8g467490 50.307 163 68 4 28 179 17 177 9.29e-47 170
MS.gene009957.t1 MTR_4g035590 52.258 155 68 3 25 177 8 158 1.13e-46 169
MS.gene009957.t1 MTR_2g062730 51.613 155 71 3 25 177 10 162 1.84e-46 167
MS.gene009957.t1 MTR_5g021710 50.980 153 72 2 25 176 8 158 1.84e-46 168
MS.gene009957.t1 MTR_4g081870 51.572 159 67 3 24 176 8 162 2.53e-46 165
MS.gene009957.t1 MTR_2g079990 50.000 164 77 2 12 175 6 164 3.21e-46 167
MS.gene009957.t1 MTR_6g084430 52.980 151 67 2 25 175 5 151 3.30e-46 166
MS.gene009957.t1 MTR_7g011130 42.995 207 95 4 10 199 8 208 5.49e-46 167
MS.gene009957.t1 MTR_7g011120 44.385 187 91 3 24 199 7 191 1.31e-45 164
MS.gene009957.t1 MTR_6g012670 51.205 166 70 3 24 187 19 175 2.14e-45 164
MS.gene009957.t1 MTR_5g041940 50.307 163 65 3 24 177 2 157 5.16e-45 161
MS.gene009957.t1 MTR_7g085220 42.723 213 83 6 25 215 8 203 7.48e-45 163
MS.gene009957.t1 MTR_5g040420 48.148 162 72 4 28 179 17 176 8.44e-45 164
MS.gene009957.t1 MTR_1g096430 51.316 152 71 2 25 175 7 156 1.10e-44 162
MS.gene009957.t1 MTR_8g094580 50.943 159 67 4 24 176 6 159 1.53e-44 160
MS.gene009957.t1 MTR_8g023930 44.776 201 94 7 25 218 24 214 1.77e-44 166
MS.gene009957.t1 MTR_3g088110 51.266 158 67 4 24 176 6 158 2.20e-44 160
MS.gene009957.t1 MTR_6g032770 48.765 162 67 4 25 177 18 172 2.47e-44 163
MS.gene009957.t1 MTR_2g080010 46.988 166 73 3 25 177 15 178 6.32e-44 161
MS.gene009957.t1 MTR_6g011860 46.552 174 81 3 12 175 2 173 8.01e-44 162
MS.gene009957.t1 MTR_3g109340 54.248 153 65 3 25 175 22 171 8.31e-44 160
MS.gene009957.t1 MTR_4g134460 51.678 149 67 3 28 175 57 201 1.02e-43 162
MS.gene009957.t1 MTR_8g059170 50.920 163 74 3 20 179 9 168 1.16e-43 159
MS.gene009957.t1 MTR_3g109340 53.595 153 65 3 25 175 22 170 2.49e-43 159
MS.gene009957.t1 MTR_2g078700 51.852 162 62 4 25 177 23 177 3.84e-43 159
MS.gene009957.t1 MTR_2g079990 54.286 140 59 2 12 151 6 140 7.00e-43 159
MS.gene009957.t1 MTR_8g024480 44.767 172 85 2 17 178 7 178 7.16e-43 160
MS.gene009957.t1 MTR_2g064470 50.311 161 65 4 24 178 10 161 7.20e-43 157
MS.gene009957.t1 MTR_3g096920 58.594 128 50 2 24 151 6 130 8.44e-43 157
MS.gene009957.t1 MTR_1g008740 53.247 154 66 4 25 175 27 177 1.43e-42 157
MS.gene009957.t1 MTR_1g008740 53.247 154 66 4 25 175 13 163 1.51e-42 157
MS.gene009957.t1 MTR_3g070040 48.824 170 71 4 24 189 7 164 4.12e-42 155
MS.gene009957.t1 MTR_7g085260 50.000 162 63 4 25 175 17 171 6.92e-42 156
MS.gene009957.t1 MTR_4g089135 45.556 180 71 4 25 179 15 192 7.75e-42 155
MS.gene009957.t1 MTR_3g096140 36.471 255 127 5 41 278 2 238 7.76e-42 155
MS.gene009957.t1 MTR_8g023900 47.059 187 84 6 25 200 12 194 9.33e-42 158
MS.gene009957.t1 MTR_8g023900 44.560 193 92 6 27 212 195 379 1.55e-40 154
MS.gene009957.t1 MTR_7g005280 51.282 156 65 4 24 176 14 161 1.58e-41 151
MS.gene009957.t1 MTR_2157s0010 47.273 165 69 5 25 175 8 168 8.69e-41 150
MS.gene009957.t1 MTR_7g100990 38.247 251 132 8 24 260 10 251 1.11e-40 151
MS.gene009957.t1 MTR_3g116070 56.154 130 52 3 25 151 23 150 7.94e-40 149
MS.gene009957.t1 MTR_2g093810 44.693 179 86 6 25 196 14 186 3.44e-39 147
MS.gene009957.t1 MTR_1g069805 48.366 153 71 3 25 175 10 156 4.90e-39 145
MS.gene009957.t1 MTR_5g090970 48.466 163 69 6 25 175 19 178 2.37e-37 141
MS.gene009957.t1 MTR_4g075980 47.020 151 70 3 28 175 18 161 4.94e-37 140
MS.gene009957.t1 MTR_7g097090 47.682 151 71 3 25 173 10 154 6.75e-37 139
MS.gene009957.t1 MTR_2g068880 43.258 178 80 6 16 175 12 186 9.20e-37 140
MS.gene009957.t1 MTR_2g068920 49.275 138 64 3 19 151 14 150 1.64e-36 139
MS.gene009957.t1 MTR_3g098810 43.195 169 82 3 22 180 11 175 3.81e-36 136
MS.gene009957.t1 MTR_5g090970 46.626 163 71 6 25 175 19 177 4.37e-36 138
MS.gene009957.t1 MTR_8g099750 42.162 185 85 5 22 197 11 182 4.60e-36 135
MS.gene009957.t1 MTR_3g098810 47.761 134 62 2 22 151 11 140 2.16e-35 132
MS.gene009957.t1 MTR_8g023880 47.059 170 59 7 25 175 7 164 1.67e-34 132
MS.gene009957.t1 MTR_4g052620 42.038 157 82 5 25 173 5 160 8.68e-31 121
MS.gene009957.t1 MTR_2g086690 41.667 156 83 5 26 173 5 160 3.57e-30 119
MS.gene009957.t1 MTR_8g094580 54.455 101 37 3 82 176 8 105 2.69e-28 113
MS.gene009957.t1 MTR_7g105170 37.576 165 91 6 22 175 1 164 3.81e-28 114
MS.gene009957.t1 MTR_7g070140 48.101 79 39 1 75 151 12 90 1.94e-19 85.5
MS.gene009957.t1 MTR_4g094302 36.434 129 70 3 25 151 11 129 6.00e-19 84.7
MS.gene009957.t1 MTR_4g094302 36.434 129 70 3 25 151 11 129 6.99e-19 85.5
MS.gene009957.t1 MTR_7g083330 36.719 128 77 3 24 150 17 141 5.62e-16 77.0
MS.gene009957.t1 MTR_7g083360 35.433 127 78 3 25 150 10 133 3.29e-14 70.9
MS.gene009957.t1 MTR_8g093790 33.758 157 78 7 24 178 9 141 8.22e-14 70.9
MS.gene009957.t1 MTR_7g070150 42.647 68 36 1 123 190 8 72 7.22e-13 65.1
MS.gene009957.t1 MTR_3g096400 33.133 166 85 8 24 174 6 160 7.73e-13 68.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene009957.t1 AT4G35580 43.070 469 182 18 17 459 1 410 9.99e-98 309
MS.gene009957.t1 AT4G35580 44.079 456 196 17 17 459 1 410 1.03e-97 310
MS.gene009957.t1 AT4G35580 43.070 469 182 18 17 459 1 410 1.05e-97 310
MS.gene009957.t1 AT3G49530 39.530 468 172 16 15 459 3 382 2.34e-91 289
MS.gene009957.t1 AT3G49530 39.530 468 172 16 15 459 3 382 2.48e-91 291
MS.gene009957.t1 AT1G33060 36.953 617 282 20 16 561 15 595 8.07e-91 295
MS.gene009957.t1 AT1G33060 37.459 606 272 20 16 550 15 584 1.11e-90 295
MS.gene009957.t1 AT5G24590 46.243 346 121 11 15 330 3 313 1.30e-90 288
MS.gene009957.t1 AT3G17730 62.252 151 57 0 25 175 6 156 6.90e-61 203
MS.gene009957.t1 AT1G65910 54.054 185 77 1 25 201 6 190 1.52e-58 208
MS.gene009957.t1 AT5G17260 62.500 152 56 1 25 175 6 157 1.60e-57 201
MS.gene009957.t1 AT3G03200 62.500 152 56 1 25 175 6 157 1.90e-56 199
MS.gene009957.t1 AT3G10500 44.889 225 114 3 21 243 5 221 1.38e-53 192
MS.gene009957.t1 AT3G10490 50.820 183 87 2 3 184 7 187 3.41e-53 182
MS.gene009957.t1 AT3G10480 50.549 182 88 1 3 184 7 186 6.21e-53 188
MS.gene009957.t1 AT3G10480 51.351 185 83 3 3 184 7 187 7.10e-53 188
MS.gene009957.t1 AT4G17980 42.510 247 107 6 25 244 6 244 6.30e-52 180
MS.gene009957.t1 AT4G17980 40.000 290 127 8 25 275 6 287 6.93e-52 181
MS.gene009957.t1 AT3G10490 50.820 183 87 2 3 184 7 187 1.14e-51 185
MS.gene009957.t1 AT5G04410 53.548 155 72 0 21 175 5 159 6.95e-51 185
MS.gene009957.t1 AT5G46590 54.140 157 66 3 25 177 6 160 7.57e-51 178
MS.gene009957.t1 AT1G54330 58.278 151 60 1 25 175 6 153 2.67e-50 177
MS.gene009957.t1 AT1G62700 52.229 157 72 3 21 176 3 157 7.13e-50 178
MS.gene009957.t1 AT1G62700 52.229 157 72 3 21 176 3 157 7.13e-50 178
MS.gene009957.t1 AT1G12260 51.592 157 73 3 21 176 3 157 1.86e-49 176
MS.gene009957.t1 AT1G12260 51.592 157 73 3 21 176 3 157 3.30e-49 177
MS.gene009957.t1 AT5G46590 59.375 128 51 1 25 151 6 133 4.45e-49 173
MS.gene009957.t1 AT5G39610 55.844 154 64 2 25 176 20 171 4.93e-49 173
MS.gene009957.t1 AT5G07680 55.063 158 57 3 25 175 3 153 9.05e-49 173
MS.gene009957.t1 AT5G07680 55.063 158 57 3 25 175 17 167 1.11e-48 173
MS.gene009957.t1 AT5G62380 49.091 165 81 2 21 184 3 165 1.53e-48 174
MS.gene009957.t1 AT5G62380 49.091 165 81 2 21 184 3 165 1.53e-48 174
MS.gene009957.t1 AT5G61430 55.556 153 64 2 25 175 16 166 1.86e-48 173
MS.gene009957.t1 AT4G10350 52.597 154 72 1 25 177 9 162 2.07e-48 173
MS.gene009957.t1 AT2G27300 40.664 241 112 6 20 252 9 226 3.26e-48 172
MS.gene009957.t1 AT1G33280 51.534 163 75 2 25 186 8 167 4.08e-48 171
MS.gene009957.t1 AT3G44290 55.172 145 57 2 28 172 17 153 5.14e-48 168
MS.gene009957.t1 AT1G32510 51.829 164 71 2 25 180 6 169 1.30e-47 169
MS.gene009957.t1 AT4G27410 50.000 168 79 2 12 179 4 166 1.80e-47 169
MS.gene009957.t1 AT3G44290 55.172 145 57 2 28 172 17 153 6.85e-47 169
MS.gene009957.t1 AT5G08790 53.459 159 62 4 25 176 7 160 8.52e-47 167
MS.gene009957.t1 AT3G29035 56.291 151 62 3 25 173 24 172 1.08e-46 167
MS.gene009957.t1 AT5G22290 52.000 150 65 2 28 177 24 166 1.67e-46 167
MS.gene009957.t1 AT4G36160 50.327 153 73 2 25 176 10 160 2.56e-46 168
MS.gene009957.t1 AT4G36160 50.327 153 73 2 25 176 10 160 2.56e-46 168
MS.gene009957.t1 AT4G36160 50.327 153 73 2 25 176 14 164 3.01e-46 168
MS.gene009957.t1 AT3G15500 50.303 165 77 2 12 176 4 163 3.42e-46 166
MS.gene009957.t1 AT3G10480 44.811 212 78 4 9 184 12 220 4.23e-46 171
MS.gene009957.t1 AT2G18060 50.327 153 73 2 25 176 9 159 5.35e-46 167
MS.gene009957.t1 AT2G18060 50.327 153 73 2 25 176 9 159 5.35e-46 167
MS.gene009957.t1 AT1G69490 48.521 169 77 3 17 179 1 165 7.38e-46 164
MS.gene009957.t1 AT5G09330 53.289 152 71 0 24 175 5 156 8.89e-46 169
MS.gene009957.t1 AT5G09330 53.289 152 71 0 24 175 5 156 8.89e-46 169
MS.gene009957.t1 AT5G09330 53.289 152 71 0 24 175 5 156 8.89e-46 169
MS.gene009957.t1 AT5G09330 53.289 152 71 0 24 175 5 156 8.89e-46 169
MS.gene009957.t1 AT5G09330 53.289 152 71 0 24 175 5 156 8.89e-46 169
MS.gene009957.t1 AT1G52890 49.697 165 78 2 12 176 4 163 1.59e-45 164
MS.gene009957.t1 AT3G18400 53.289 152 66 3 25 175 5 152 2.14e-45 164
MS.gene009957.t1 AT5G66300 49.673 153 75 2 25 176 12 163 2.35e-45 163
MS.gene009957.t1 AT5G63790 53.459 159 62 5 25 176 50 203 5.21e-45 163
MS.gene009957.t1 AT5G63790 53.459 159 62 5 25 176 60 213 5.49e-45 163
MS.gene009957.t1 AT2G24430 53.548 155 67 3 25 177 16 167 7.57e-45 162
MS.gene009957.t1 AT2G24430 53.548 155 67 3 25 177 16 167 7.57e-45 162
MS.gene009957.t1 AT5G64060 50.331 151 75 0 25 175 6 156 1.30e-44 163
MS.gene009957.t1 AT2G02450 51.007 149 68 3 28 175 54 198 1.33e-44 164
MS.gene009957.t1 AT2G02450 51.007 149 68 3 28 175 54 198 1.42e-44 164
MS.gene009957.t1 AT1G26870 44.920 187 86 4 28 199 19 203 1.43e-44 164
MS.gene009957.t1 AT1G76420 52.941 153 67 3 25 175 22 171 1.53e-44 162
MS.gene009957.t1 AT4G27410 45.902 183 81 2 12 179 4 183 2.18e-44 161
MS.gene009957.t1 AT1G34190 55.405 148 66 0 28 175 19 166 2.32e-44 167
MS.gene009957.t1 AT3G04060 51.534 163 64 4 25 179 20 175 4.21e-44 161
MS.gene009957.t1 AT1G34180 53.378 148 69 0 28 175 19 166 4.69e-44 164
MS.gene009957.t1 AT5G18270 49.153 177 80 4 14 182 5 179 5.62e-44 160
MS.gene009957.t1 AT3G15170 43.119 218 99 7 25 233 20 221 5.74e-44 160
MS.gene009957.t1 AT3G04070 47.126 174 78 5 25 186 10 181 5.92e-44 160
MS.gene009957.t1 AT5G18270 49.153 177 80 4 14 182 5 179 8.66e-44 160
MS.gene009957.t1 AT1G56010 48.795 166 69 4 24 180 18 176 1.22e-43 159
MS.gene009957.t1 AT2G46770 44.571 175 83 3 17 177 8 182 1.83e-43 160
MS.gene009957.t1 AT1G71930 48.684 152 75 2 25 175 9 158 2.47e-43 159
MS.gene009957.t1 AT1G71930 48.684 152 75 2 25 175 9 158 2.47e-43 159
MS.gene009957.t1 AT1G34180 53.378 148 69 0 28 175 19 166 2.66e-43 164
MS.gene009957.t1 AT1G01720 49.689 161 70 4 22 176 4 159 2.80e-43 157
MS.gene009957.t1 AT2G33480 53.247 154 65 3 24 176 14 161 3.17e-43 156
MS.gene009957.t1 AT5G13180 50.323 155 69 3 24 176 13 161 7.61e-43 155
MS.gene009957.t1 AT3G12977 44.920 187 94 5 25 205 18 201 1.12e-42 155
MS.gene009957.t1 AT1G32770 45.506 178 74 4 17 177 8 179 1.25e-42 157
MS.gene009957.t1 AT5G39820 45.665 173 69 5 28 177 23 193 1.32e-42 157
MS.gene009957.t1 AT2G33480 51.634 153 67 2 24 176 14 159 6.17e-42 153
MS.gene009957.t1 AT1G77450 48.101 158 72 4 24 176 9 161 8.18e-42 152
MS.gene009957.t1 AT1G61110 50.000 164 67 4 25 175 16 177 9.52e-42 154
MS.gene009957.t1 AT3G04070 43.158 190 78 5 25 186 10 197 1.51e-41 154
MS.gene009957.t1 AT2G43000 47.097 155 78 3 23 175 15 167 1.57e-41 152
MS.gene009957.t1 AT5G53950 50.888 169 65 5 25 184 17 176 6.05e-41 153
MS.gene009957.t1 AT1G34180 49.375 160 69 1 28 175 19 178 7.93e-41 155
MS.gene009957.t1 AT3G15510 40.887 203 98 4 29 218 21 214 1.05e-40 152
MS.gene009957.t1 AT1G79580 48.077 156 76 3 25 178 17 169 1.86e-40 152
MS.gene009957.t1 AT1G79580 48.077 156 76 3 25 178 17 169 1.86e-40 152
MS.gene009957.t1 AT1G79580 48.077 156 76 3 25 178 17 169 1.86e-40 152
MS.gene009957.t1 AT1G79580 48.077 156 76 3 25 178 17 169 1.86e-40 152
MS.gene009957.t1 AT1G79580 48.077 156 76 3 25 178 17 169 1.86e-40 152
MS.gene009957.t1 AT3G61910 41.573 178 84 3 17 177 3 177 2.28e-40 150
MS.gene009957.t1 AT1G34180 49.375 160 69 1 28 175 19 178 3.89e-40 155
MS.gene009957.t1 AT2G17040 36.154 260 146 6 28 274 9 261 8.08e-39 144
MS.gene009957.t1 AT4G28530 46.591 176 69 5 24 180 9 178 3.76e-38 145
MS.gene009957.t1 AT5G04395 45.714 140 62 2 25 150 28 167 5.99e-37 136
MS.gene009957.t1 AT1G32870 51.634 153 70 2 25 175 10 160 7.67e-37 145
MS.gene009957.t1 AT1G32870 51.634 153 70 2 25 175 10 160 7.74e-37 145
MS.gene009957.t1 AT1G32870 51.634 153 70 2 25 175 46 196 2.24e-36 144
MS.gene009957.t1 AT3G12910 41.837 196 82 9 1 175 1 185 7.67e-36 137
MS.gene009957.t1 AT4G01550 40.884 181 91 5 27 199 6 178 7.75e-36 140
MS.gene009957.t1 AT1G52880 46.626 163 73 4 29 179 21 181 6.79e-35 135
MS.gene009957.t1 AT5G61430 60.204 98 37 1 80 175 6 103 1.76e-33 129
MS.gene009957.t1 AT1G02230 42.045 176 86 8 26 193 4 171 2.27e-32 129
MS.gene009957.t1 AT4G01520 35.676 185 93 6 22 198 1 167 1.26e-30 122
MS.gene009957.t1 AT3G12977 45.736 129 65 2 82 205 20 148 1.37e-30 120
MS.gene009957.t1 AT4G10350 54.167 96 44 0 82 177 20 115 2.36e-30 121
MS.gene009957.t1 AT4G01540 35.955 178 88 6 27 196 6 165 4.23e-29 120
MS.gene009957.t1 AT4G01540 35.556 180 90 6 27 198 6 167 4.76e-29 120
MS.gene009957.t1 AT5G22380 41.139 158 86 5 23 173 3 160 7.00e-29 115
MS.gene009957.t1 AT4G01540 35.556 180 90 6 27 198 6 167 8.15e-29 119
MS.gene009957.t1 AT4G01540 35.955 178 88 6 27 196 6 165 8.69e-29 120
MS.gene009957.t1 AT1G02250 38.660 194 103 9 26 211 4 189 1.21e-28 118
MS.gene009957.t1 AT3G44350 38.650 163 95 4 24 181 4 166 5.19e-28 113
MS.gene009957.t1 AT1G56010 49.138 116 44 3 73 180 1 109 1.33e-27 112
MS.gene009957.t1 AT3G04420 39.062 192 98 6 26 206 4 187 2.50e-27 112
MS.gene009957.t1 AT3G04420 39.062 192 98 6 26 206 4 187 3.82e-27 113
MS.gene009957.t1 AT2G33480 48.077 104 54 0 73 176 1 104 1.01e-26 108
MS.gene009957.t1 AT3G44350 41.667 132 73 3 24 151 4 135 3.54e-26 105
MS.gene009957.t1 AT1G01010 39.264 163 82 4 27 179 5 160 6.52e-26 111
MS.gene009957.t1 AT3G10490 57.471 87 36 1 99 184 1 87 4.10e-24 104
MS.gene009957.t1 AT3G10490 57.471 87 36 1 99 184 1 87 4.10e-24 104
MS.gene009957.t1 AT1G02220 39.073 151 80 4 26 173 4 145 9.43e-23 101
MS.gene009957.t1 AT4G28530 47.273 110 40 2 24 117 9 116 3.33e-21 95.5
MS.gene009957.t1 AT2G43000 46.512 86 45 1 91 175 4 89 1.11e-18 85.1
MS.gene009957.t1 AT2G18060 50.704 71 33 1 106 176 3 71 2.45e-18 86.3
MS.gene009957.t1 AT5G64530 36.719 128 65 4 25 150 3 116 3.73e-18 82.4
MS.gene009957.t1 AT5G64530 30.108 186 92 6 25 194 3 166 1.48e-17 81.6
MS.gene009957.t1 AT5G22290 51.389 72 29 1 106 177 2 67 2.64e-17 82.4
MS.gene009957.t1 AT5G14000 31.783 129 82 2 24 150 14 138 2.18e-14 71.6
MS.gene009957.t1 AT5G50820 33.333 132 74 4 24 151 16 137 6.73e-14 71.2
MS.gene009957.t1 AT3G55210 29.448 163 95 6 25 173 11 167 9.18e-14 72.8
MS.gene009957.t1 AT3G04430 34.559 136 75 5 31 154 6 139 1.00e-13 70.9
MS.gene009957.t1 AT1G25580 27.731 238 139 9 25 248 58 276 1.75e-13 73.6
MS.gene009957.t1 AT5G14000 31.783 129 82 2 24 150 14 138 4.76e-13 68.9
MS.gene009957.t1 AT3G56530 27.152 151 105 3 25 173 52 199 7.27e-13 70.5

Find 175 sgRNAs with CRISPR-Local

Find 273 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAGTATTGCTTGTTAATATT+TGG 0.124257 5.3:+54962597 MS.gene009957:CDS
GCACACTTTCCACCAGAATT+TGG 0.222116 5.3:+54961380 MS.gene009957:CDS
ATATGAACAATCGAGGATTT+TGG 0.229784 5.3:+54962175 MS.gene009957:CDS
AGTATTGCTTGTTAATATTT+GGG 0.242660 5.3:+54962598 MS.gene009957:CDS
TCCACCAGAATTTGGCTATC+AGG 0.273763 5.3:+54961388 MS.gene009957:CDS
TATTTCTTCTGGAGAGTAAT+TGG 0.283362 5.3:-54960950 None:intergenic
ATGGAAACGGTGATGAAGTT+TGG 0.293664 5.3:+54959435 MS.gene009957:CDS
AGGTCAGACTGTATTTCTTC+TGG 0.294408 5.3:-54960961 None:intergenic
TGCCGTTAGGGTTCCGCTTC+CGG 0.296315 5.3:+54959366 MS.gene009957:CDS
GTGGAAAGTGTGCATGGGCT+GGG 0.298461 5.3:-54961370 None:intergenic
TCGATGGCGGCACTGGAATT+AGG 0.299505 5.3:+54962000 MS.gene009957:CDS
CTTCCTTGTGCTTGCATCAC+CGG 0.303512 5.3:-54962065 None:intergenic
GGTGGAAAGTGTGCATGGGC+TGG 0.306967 5.3:-54961371 None:intergenic
TGAATCACTGGGTTCATGTT+TGG 0.314659 5.3:-54962251 None:intergenic
CTACCTTGTGCTTGAATCAC+TGG 0.326312 5.3:-54962263 None:intergenic
CATTTACCACAGTGGTCATT+TGG 0.343804 5.3:-54961944 None:intergenic
TTGAACCGCGCAACAACTAA+TGG 0.350476 5.3:+54960361 MS.gene009957:CDS
TGGACAGTGACACTGGTATA+AGG 0.358495 5.3:+54962195 MS.gene009957:CDS
TTGGCCTGATAGCCAAATTC+TGG 0.370776 5.3:-54961392 None:intergenic
AACAATGAATTAATTCAGTA+TGG 0.382424 5.3:+54961413 MS.gene009957:CDS
AACAAGCGACAAAGGACATA+TGG 0.385126 5.3:-54960853 None:intergenic
AGTAGACCGCATAGCGCTAA+TGG 0.386764 5.3:-54962540 None:intergenic
ATACTGAATTAATTCATTGT+TGG 0.391012 5.3:-54961411 None:intergenic
TTTCAACTCGTGTGTTAATT+GGG 0.393985 5.3:+54961463 MS.gene009957:CDS
TGGAAACGGTGATGAAGTTT+GGG 0.404121 5.3:+54959436 MS.gene009957:CDS
CGAAGGGGACGAGGACTCAT+TGG 0.406168 5.3:+54960479 MS.gene009957:CDS
ATTGCTTCCTCAGAGTTCTC+AGG 0.411769 5.3:-54961045 None:intergenic
CTACGCTGGTCGGGCTCCGA+AGG 0.413682 5.3:+54960462 MS.gene009957:CDS
AAGTCTGGTGCTACCTTGAT+TGG 0.414025 5.3:+54960418 MS.gene009957:CDS
ACTTTCTGTTGGGCAGGGTT+CGG 0.421621 5.3:+54962498 MS.gene009957:CDS
TTCCTTGTGCTTGCATCACC+GGG 0.423967 5.3:-54962064 None:intergenic
TGCATATTCTGCCATTGTAA+TGG 0.426415 5.3:+54962568 MS.gene009957:CDS
CAGCGACTCGGATGTGGAAA+TGG 0.427111 5.3:+54961562 MS.gene009957:CDS
ACTGTTGTCGATGGCGGCAC+TGG 0.435924 5.3:+54961993 MS.gene009957:CDS
TGCATCACCGGGTTCATGTC+TGG 0.438226 5.3:-54962053 None:intergenic
TATCATTAGAAAGAGTCATC+TGG 0.440631 5.3:-54961914 None:intergenic
TTAATTCAGTATGGTACAAA+CGG 0.441461 5.3:+54961422 MS.gene009957:CDS
GGAAGACCAGCTGTTAAACT+TGG 0.444270 5.3:+54961292 MS.gene009957:intron
TCACTGAACAAGCTGCCGTT+AGG 0.444340 5.3:+54959353 MS.gene009957:CDS
GTCGGGCTCCGAAGGGGACG+AGG 0.452151 5.3:+54960470 MS.gene009957:CDS
TTCGGATACTTCCGATCCAT+TGG 0.452190 5.3:-54960328 None:intergenic
TGTTTGTAAATTTGAGCCTT+GGG 0.455207 5.3:+54959475 MS.gene009957:CDS
ATATGAGCAAATGTGGAATT+CGG 0.456375 5.3:+54961968 MS.gene009957:CDS
TACAAAAGATGAGAGTTTGC+AGG 0.457897 5.3:+54962346 MS.gene009957:CDS
TCTGAGGAGACGACGGAAGA+TGG 0.460186 5.3:+54962137 MS.gene009957:CDS
CCTACCTTAAAAGAGCTTGA+TGG 0.460227 5.3:+54960520 MS.gene009957:CDS
GCATCGCTATAGCAATCAGC+TGG 0.462592 5.3:-54961084 None:intergenic
AGTCTTCTTCATTCCAATCA+AGG 0.464930 5.3:-54960431 None:intergenic
AATGGGTATTGGAAGGCAAC+AGG 0.469601 5.3:+54960379 MS.gene009957:CDS
GTCGCAACAAGCGGAGGAGC+TGG 0.476862 5.3:+54959322 MS.gene009957:CDS
ATGTTTGTAAATTTGAGCCT+TGG 0.478978 5.3:+54959474 MS.gene009957:CDS
TACGCTGGTCGGGCTCCGAA+GGG 0.481533 5.3:+54960463 MS.gene009957:CDS
TGAACCGCGCAACAACTAAT+GGG 0.482788 5.3:+54960362 MS.gene009957:CDS
TATTTAAGGATGAAGATCAA+TGG 0.483760 5.3:+54959416 MS.gene009957:CDS
AATACAGTCTGACCTAAGTC+TGG 0.484416 5.3:+54960969 MS.gene009957:CDS
AGATGAGAGTAGACCTGTCC+AGG 0.485145 5.3:-54960550 None:intergenic
CAATGAGTCCTCGTCCCCTT+CGG 0.485305 5.3:-54960478 None:intergenic
ACAGATCTCTCTTGCTGACA+TGG 0.487787 5.3:-54962432 None:intergenic
GACTCTTTCTAATGATAGCA+TGG 0.489796 5.3:+54961920 MS.gene009957:CDS
CACTGAACAAGCTGCCGTTA+GGG 0.490131 5.3:+54959354 MS.gene009957:CDS
GAGCTTGATGGCACCAACCC+TGG 0.490651 5.3:+54960532 MS.gene009957:CDS
ACTCCACAAAATAGTGATGT+AGG 0.490932 5.3:+54961873 MS.gene009957:CDS
GGGAGATGTCTTCTCTGAAT+CGG 0.491871 5.3:-54962411 None:intergenic
GCGCAACAACTAATGGGTAT+TGG 0.492493 5.3:+54960368 MS.gene009957:CDS
TTGTAGATTTATCGATCGTA+AGG 0.496524 5.3:+54960275 MS.gene009957:intron
ACGATTTGAGCTTGAGCCAT+GGG 0.499250 5.3:+54961331 MS.gene009957:CDS
TTTGAGCCTTGGGATTTGCC+TGG 0.499957 5.3:+54959485 MS.gene009957:CDS
AAGACTGATAGACGCCTCAC+TGG 0.500018 5.3:-54961495 None:intergenic
CCTCGTCAGTAGGCCGGAAG+CGG 0.502257 5.3:-54959379 None:intergenic
CGGTTCAATCTGCTCCCATT+CGG 0.502927 5.3:-54960346 None:intergenic
GAAGGGGACGAGGACTCATT+GGG 0.503369 5.3:+54960480 MS.gene009957:CDS
CTGAGGAGACGACGGAAGAT+GGG 0.508026 5.3:+54962138 MS.gene009957:CDS
GCTGTTACTAACCATCATAT+TGG 0.508994 5.3:-54961585 None:intergenic
TGCACCAAGGAGAATACGAT+TGG 0.510811 5.3:+54962088 MS.gene009957:CDS
AAAGATCGAAGGATCAAGTC+TGG 0.512532 5.3:+54960403 MS.gene009957:CDS
AGATGAGAGTTTGCAGGAGA+CGG 0.513317 5.3:+54962352 MS.gene009957:CDS
ACAAGCGACAAAGGACATAT+GGG 0.513337 5.3:-54960852 None:intergenic
TGATGGCACCAACCCTGGAC+AGG 0.515668 5.3:+54960537 MS.gene009957:CDS
GTCGTGCAGCGACTCGGATG+TGG 0.519491 5.3:+54961556 MS.gene009957:CDS
CCGTCGTCTCCTCAGAAACA+AGG 0.519813 5.3:-54962130 None:intergenic
CCTCCCAATCGTATTCTCCT+TGG 0.520034 5.3:-54962092 None:intergenic
CAAGCATTCCCTTGTTTCCG+AGG 0.521043 5.3:+54962319 MS.gene009957:CDS
GTGACACTGGTATAAGGATA+AGG 0.523174 5.3:+54962201 MS.gene009957:CDS
TACCTTGTGCTTGAATCACT+GGG 0.526925 5.3:-54962262 None:intergenic
TAATTCAGTATGGTACAAAC+GGG 0.529323 5.3:+54961423 MS.gene009957:CDS
TTGTAGTCTCCTCGGAAACA+AGG 0.529566 5.3:-54962328 None:intergenic
TGCGCGTTCCCTTGTTTCTG+AGG 0.529631 5.3:+54962121 MS.gene009957:CDS
CACGATTTGAGCTTGAGCCA+TGG 0.532975 5.3:+54961330 MS.gene009957:CDS
ATATGTCCAAGTTTAACAGC+TGG 0.536412 5.3:-54961298 None:intergenic
ACGCTGGTCGGGCTCCGAAG+GGG 0.537215 5.3:+54960464 MS.gene009957:CDS
TGGAAAGTGTGCATGGGCTG+GGG 0.538723 5.3:-54961369 None:intergenic
GCCCCGCGTAGAATACGATT+AGG 0.540078 5.3:+54962287 MS.gene009957:CDS
TTTAGAAGTACCGGCTGCAG+AGG 0.540263 5.3:+54961137 MS.gene009957:CDS
GTCGCTAGTGAGGAAGATAC+AGG 0.541800 5.3:-54960994 None:intergenic
ATCATTAGAAAGAGTCATCT+GGG 0.542441 5.3:-54961913 None:intergenic
GCGGCACTGGAATTAGGATA+AGG 0.543075 5.3:+54962006 MS.gene009957:CDS
GTATTGCTTGTTAATATTTG+GGG 0.547201 5.3:+54962599 MS.gene009957:CDS
CAAGCTCCTCGTCAGTAGGC+CGG 0.550456 5.3:-54959385 None:intergenic
ACATCAGAGTTTAGAAGTAC+CGG 0.554540 5.3:+54961128 MS.gene009957:CDS
TAAATGAATATGAGCAAATG+TGG 0.557259 5.3:+54961961 MS.gene009957:CDS
TTGCTTCCTCAGAGTTCTCA+GGG 0.559559 5.3:-54961044 None:intergenic
CTCTTACCAGGCAAATCCCA+AGG 0.560038 5.3:-54959491 None:intergenic
AAGATACAGGAACCAGACTT+AGG 0.561854 5.3:-54960981 None:intergenic
CTCCTAATCGTATTCTACGC+GGG 0.566860 5.3:-54962289 None:intergenic
AAATGGGTCGTGCAGCGACT+CGG 0.567183 5.3:+54961550 MS.gene009957:CDS
AGTTCTCAGGGATAGCTGCT+AGG 0.567787 5.3:-54961032 None:intergenic
AGGATGAAGATCAATGGAAA+CGG 0.569002 5.3:+54959422 MS.gene009957:CDS
GAGAATAACTTATCATCCCA+TGG 0.570032 5.3:-54961347 None:intergenic
CCGCTTCCGGCCTACTGACG+AGG 0.570829 5.3:+54959379 MS.gene009957:CDS
ACTCTTTCTAATGATAGCAT+GGG 0.570861 5.3:+54961921 MS.gene009957:CDS
AGAGTAGACCTGTCCAGGGT+TGG 0.572395 5.3:-54960545 None:intergenic
TTCATCTTCTGTCGCTAGTG+AGG 0.575075 5.3:-54961004 None:intergenic
GGCCGGAAGCGGAACCCTAA+CGG 0.575633 5.3:-54959368 None:intergenic
TGGATCGGAAGTATCCGAAT+GGG 0.576646 5.3:+54960332 MS.gene009957:CDS
GCTTCTTAAACAAGCGACAA+AGG 0.577150 5.3:-54960861 None:intergenic
CAGATCTCTCTTGCTGACAT+GGG 0.580999 5.3:-54962431 None:intergenic
CATCGCTATAGCAATCAGCT+GGG 0.583887 5.3:-54961083 None:intergenic
CAGCACTCTCAGCAGCAGCA+TGG 0.584530 5.3:-54962388 None:intergenic
TGTGGAAATGGCCAATATGA+TGG 0.586555 5.3:+54961574 MS.gene009957:CDS
CTCCACAAAATAGTGATGTA+GGG 0.587092 5.3:+54961874 MS.gene009957:CDS
TCCTCCGCTTGTTGCGACGA+CGG 0.588388 5.3:-54959317 None:intergenic
GCCCATCTTACCTCTGCAGC+CGG 0.589631 5.3:-54961147 None:intergenic
TCGGATACTGTTGTCGATGG+CGG 0.589834 5.3:+54961987 MS.gene009957:CDS
CACTAGCGACAGAAGATGAA+AGG 0.590698 5.3:+54961007 MS.gene009957:CDS
GCCTGATAGCCAAATTCTGG+TGG 0.593697 5.3:-54961389 None:intergenic
GCACCAAGGAGAATACGATT+GGG 0.595669 5.3:+54962089 MS.gene009957:CDS
AACAACTAATGGGTATTGGA+AGG 0.596221 5.3:+54960372 MS.gene009957:CDS
ATTCTGGTGGAAAGTGTGCA+TGG 0.598446 5.3:-54961376 None:intergenic
TCAACAAGCTCCTCGTCAGT+AGG 0.599213 5.3:-54959389 None:intergenic
AACCCGGTGATGCAAGCACA+AGG 0.605040 5.3:+54962062 MS.gene009957:CDS
GATGAGAGTAGACCTGTCCA+GGG 0.605085 5.3:-54960549 None:intergenic
TTCTGGTGGAAAGTGTGCAT+GGG 0.611417 5.3:-54961375 None:intergenic
TTTATCGATCGTAAGGAACA+AGG 0.615540 5.3:+54960282 MS.gene009957:CDS
AATTCGGATACTGTTGTCGA+TGG 0.617050 5.3:+54961984 MS.gene009957:CDS
TGTAGTCTCCTCGGAAACAA+GGG 0.617655 5.3:-54962327 None:intergenic
CCTTGTTTCTGAGGAGACGA+CGG 0.620782 5.3:+54962130 MS.gene009957:CDS
ATGGCTCAAGCTCAAATCGT+GGG 0.621257 5.3:-54961328 None:intergenic
ATGGATCGGAAGTATCCGAA+TGG 0.622532 5.3:+54960331 MS.gene009957:CDS
CCGCGTAGAATACGATTAGG+AGG 0.622604 5.3:+54962290 MS.gene009957:CDS
AAGTTCAAACTGTGGTGAAG+CGG 0.625096 5.3:+54960900 MS.gene009957:CDS
AATACCCATTAGTTGTTGCG+CGG 0.626523 5.3:-54960366 None:intergenic
GCATCACATGATTATCCAGA+GGG 0.629292 5.3:+54961846 MS.gene009957:CDS
CATGGCTCAAGCTCAAATCG+TGG 0.630025 5.3:-54961329 None:intergenic
GCAACAAGCGGAGGAGCTGG+CGG 0.630298 5.3:+54959325 MS.gene009957:CDS
TTTACCGTCGTCGCAACAAG+CGG 0.632140 5.3:+54959313 MS.gene009957:CDS
CTCATATTCATTTACCACAG+TGG 0.633818 5.3:-54961952 None:intergenic
AGGCAACAGGAAAAGATCGA+AGG 0.636903 5.3:+54960392 MS.gene009957:CDS
TCCTAATCGTATTCTACGCG+GGG 0.637438 5.3:-54962288 None:intergenic
ATCAGCTGGGGTTATAACGT+GGG 0.641971 5.3:-54961070 None:intergenic
CATCAGAATATGAACAATCG+AGG 0.642537 5.3:+54962168 MS.gene009957:CDS
GGAGAGTAATTGGCAGTCGT+AGG 0.642617 5.3:-54960940 None:intergenic
CGACGGTAAACACTCAACTA+CGG 0.643070 5.3:-54959300 None:intergenic
AATCAGCTGGGGTTATAACG+TGG 0.648862 5.3:-54961071 None:intergenic
CCAAGGAGAATACGATTGGG+AGG 0.651383 5.3:+54962092 MS.gene009957:CDS
CGTCGTCTCCTCAGAAACAA+GGG 0.652580 5.3:-54962129 None:intergenic
ACCGTCGTCGCAACAAGCGG+AGG 0.653126 5.3:+54959316 MS.gene009957:CDS
TACTAGCGAGACCATTACAA+TGG 0.671283 5.3:-54962579 None:intergenic
TGAACAACCAGACATGAACC+CGG 0.672019 5.3:+54962046 MS.gene009957:CDS
ACACTGGTATAAGGATAAGG+AGG 0.673680 5.3:+54962204 MS.gene009957:CDS
AGCATCACATGATTATCCAG+AGG 0.675169 5.3:+54961845 MS.gene009957:CDS
AGACCGCATAGCGCTAATGG+AGG 0.680239 5.3:-54962537 None:intergenic
AACCCAGTGATTCAAGCACA+AGG 0.683254 5.3:+54962260 MS.gene009957:CDS
CCTCCTAATCGTATTCTACG+CGG 0.684086 5.3:-54962290 None:intergenic
ACAACTGCAGAATCCAACGT+GGG 0.689452 5.3:+54962467 MS.gene009957:CDS
CATCCTCCATTAGCGCTATG+CGG 0.691292 5.3:+54962534 MS.gene009957:CDS
TTGGGACGAGTTCTCCAGTG+AGG 0.712013 5.3:+54961481 MS.gene009957:CDS
ATCGCTATAGCAATCAGCTG+GGG 0.717192 5.3:-54961082 None:intergenic
AGCTATCCCTGAGAACTCTG+AGG 0.720586 5.3:+54961038 MS.gene009957:CDS
ATTAGGATAAGGTCTAGACA+AGG 0.726784 5.3:+54962017 MS.gene009957:CDS
TACAACTGCAGAATCCAACG+TGG 0.729247 5.3:+54962466 MS.gene009957:CDS
AAGCACAAGGAAGTGCACCA+AGG 0.746045 5.3:+54962075 MS.gene009957:CDS
TAAGGAACAAGGATCCAGAG+TGG 0.758355 5.3:+54960293 MS.gene009957:CDS
CAACTGCAGAATCCAACGTG+GGG 0.763398 5.3:+54962468 MS.gene009957:CDS
AGTCTTGCAAGTTCAAACTG+TGG 0.773510 5.3:+54960892 MS.gene009957:CDS
CATGGGCCAAATGACCACTG+TGG 0.787507 5.3:+54961938 MS.gene009957:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATTTTATTGTATATATGT+CGG + chr5.3:54961754-54961773 MS.gene009957:intron 10.0%
!! AAACATAAAATAAAAAAGAG+AGG - chr5.3:54960576-54960595 None:intergenic 15.0%
!! ATAATTATCTATAATTGCTT+AGG - chr5.3:54960790-54960809 None:intergenic 15.0%
!! ATACAATAAAATTTGTGTTA+AGG - chr5.3:54961748-54961767 None:intergenic 15.0%
!! TCATTCAAATAAAACATTAA+AGG - chr5.3:54961205-54961224 None:intergenic 15.0%
!! TTGATATGTAAATTTATAAG+TGG + chr5.3:54959635-54959654 MS.gene009957:intron 15.0%
!!! ATGAGTTTTTTTTTTTTCTA+TGG + chr5.3:54959711-54959730 MS.gene009957:intron 15.0%
!!! ATTAGTTTTGTTGAAAATTA+GGG + chr5.3:54959845-54959864 MS.gene009957:intron 15.0%
!!! ATTTTCTGGAATTTTAAAAA+TGG - chr5.3:54961534-54961553 None:intergenic 15.0%
!!! ATTTTTAAAATTCCAGAAAA+TGG + chr5.3:54961533-54961552 MS.gene009957:CDS 15.0%
!!! GGAATTTTTTTGATTTTTAA+TGG + chr5.3:54959732-54959751 MS.gene009957:intron 15.0%
!!! TCTCTTTTTTATTTTATGTT+TGG + chr5.3:54960575-54960594 MS.gene009957:intron 15.0%
!!! TTTTTAAAATTCCAGAAAAT+GGG + chr5.3:54961534-54961553 MS.gene009957:CDS 15.0%
!! AACAATGAATTAATTCAGTA+TGG + chr5.3:54961413-54961432 MS.gene009957:CDS 20.0%
!! AATGACCAAACAAAAAAAAA+AGG - chr5.3:54961618-54961637 None:intergenic 20.0%
!! ATACTGAATTAATTCATTGT+TGG - chr5.3:54961414-54961433 None:intergenic 20.0%
!! ATGACCAAACAAAAAAAAAA+GGG - chr5.3:54961617-54961636 None:intergenic 20.0%
!! TAAAAAAAATTTCTCTTACC+AGG - chr5.3:54959506-54959525 None:intergenic 20.0%
!!! AGCTTGTTGATTTTTATTTA+AGG + chr5.3:54959402-54959421 MS.gene009957:CDS 20.0%
!!! AGTATTGCTTGTTAATATTT+GGG + chr5.3:54962598-54962617 MS.gene009957:CDS 20.0%
!!! CATTAGTTTTGTTGAAAATT+AGG + chr5.3:54959844-54959863 MS.gene009957:intron 20.0%
!!! TAGTATTGCTTGTTAATATT+TGG + chr5.3:54962597-54962616 MS.gene009957:CDS 20.0%
!!! TGATTTTTAATGGTTAAATG+TGG + chr5.3:54959742-54959761 MS.gene009957:intron 20.0%
!!! TTGATGATTTTATTGATGAT+GGG + chr5.3:54959779-54959798 MS.gene009957:intron 20.0%
!!! TTGTGAGAATTAATTTTGAA+TGG + chr5.3:54960153-54960172 MS.gene009957:intron 20.0%
!!! TTTGATGATTTTATTGATGA+TGG + chr5.3:54959778-54959797 MS.gene009957:intron 20.0%
!!! TTTTTGTTCTTTTGATGATT+TGG + chr5.3:54959551-54959570 MS.gene009957:intron 20.0%
! ATTAGTCAAGGACAAAATAA+AGG - chr5.3:54960742-54960761 None:intergenic 25.0%
! TAAATGAATATGAGCAAATG+TGG + chr5.3:54961961-54961980 MS.gene009957:CDS 25.0%
! TACTTGATGTTAACTATTTC+AGG + chr5.3:54961271-54961290 MS.gene009957:intron 25.0%
! TAGGGAAAATTAATCTTGAA+TGG + chr5.3:54959863-54959882 MS.gene009957:intron 25.0%
! TATTTAAGGATGAAGATCAA+TGG + chr5.3:54959416-54959435 MS.gene009957:CDS 25.0%
! TCAGATTTAAATTATACCCA+TGG - chr5.3:54961804-54961823 None:intergenic 25.0%
! TGACCAAACAAAAAAAAAAG+GGG - chr5.3:54961616-54961635 None:intergenic 25.0%
! TTAAGAACATTAACAGGAAA+AGG - chr5.3:54961701-54961720 None:intergenic 25.0%
! TTAATTCAGTATGGTACAAA+CGG + chr5.3:54961422-54961441 MS.gene009957:CDS 25.0%
!! AGTTATGTTTTCTAATACCA+TGG + chr5.3:54961784-54961803 MS.gene009957:intron 25.0%
!! ATTAGCTTAAGAACATTAAC+AGG - chr5.3:54961707-54961726 None:intergenic 25.0%
!! GTATTGCTTGTTAATATTTG+GGG + chr5.3:54962599-54962618 MS.gene009957:CDS 25.0%
!! GTTATGTTTTCTAATACCAT+GGG + chr5.3:54961785-54961804 MS.gene009957:intron 25.0%
!!! ACACTAATTTTGGTGAAATT+TGG + chr5.3:54959975-54959994 MS.gene009957:intron 25.0%
!!! ACTAATTTTGGTGAAATTTG+GGG + chr5.3:54959977-54959996 MS.gene009957:intron 25.0%
!!! CACTAATTTTGGTGAAATTT+GGG + chr5.3:54959976-54959995 MS.gene009957:intron 25.0%
!!! CTGGAATTTTAAAAATGGTT+GGG - chr5.3:54961529-54961548 None:intergenic 25.0%
!!! TCATGATTTTTGTTGATGAT+GGG + chr5.3:54960234-54960253 MS.gene009957:intron 25.0%
!!! TCTGGAATTTTAAAAATGGT+TGG - chr5.3:54961530-54961549 None:intergenic 25.0%
!!! TTCATGATTTTGATGATGAT+GGG + chr5.3:54960080-54960099 MS.gene009957:intron 25.0%
!!! TTCATGATTTTTGTTGATGA+TGG + chr5.3:54960233-54960252 MS.gene009957:intron 25.0%
!!! TTTCATGATTTTGATGATGA+TGG + chr5.3:54960079-54960098 MS.gene009957:intron 25.0%
ACTAACAAATTGCATTCTGA+TGG - chr5.3:54961652-54961671 None:intergenic 30.0%
ACTCTTTCTAATGATAGCAT+GGG + chr5.3:54961921-54961940 MS.gene009957:CDS 30.0%
AGTGACTTCAAATCAATAGA+AGG - chr5.3:54961229-54961248 None:intergenic 30.0%
ATATGAGCAAATGTGGAATT+CGG + chr5.3:54961968-54961987 MS.gene009957:CDS 30.0%
ATCATTAGAAAGAGTCATCT+GGG - chr5.3:54961916-54961935 None:intergenic 30.0%
ATGTTTGTAAATTTGAGCCT+TGG + chr5.3:54959474-54959493 MS.gene009957:CDS 30.0%
TAATTCAGTATGGTACAAAC+GGG + chr5.3:54961423-54961442 MS.gene009957:CDS 30.0%
TATCATTAGAAAGAGTCATC+TGG - chr5.3:54961917-54961936 None:intergenic 30.0%
TGTTTGTAAATTTGAGCCTT+GGG + chr5.3:54959475-54959494 MS.gene009957:CDS 30.0%
TTGTAGATTTATCGATCGTA+AGG + chr5.3:54960275-54960294 MS.gene009957:intron 30.0%
TTTCAACTCGTGTGTTAATT+GGG + chr5.3:54961463-54961482 MS.gene009957:CDS 30.0%
! AAGGACAAAATAAAGGTACA+CGG - chr5.3:54960735-54960754 None:intergenic 30.0%
! ATATGAACAATCGAGGATTT+TGG + chr5.3:54962175-54962194 MS.gene009957:CDS 30.0%
! ATGTTTCTAACTTCTCAACA+TGG + chr5.3:54960808-54960827 MS.gene009957:intron 30.0%
! GAATTTTGTTGCAGGTTTAA+CGG + chr5.3:54959811-54959830 MS.gene009957:intron 30.0%
! TATTTCTTCTGGAGAGTAAT+TGG - chr5.3:54960953-54960972 None:intergenic 30.0%
! TGGGGGAAATTAATTTTGTA+TGG + chr5.3:54959995-54960014 MS.gene009957:intron 30.0%
! TTTCATGGTTTTCTTGATGA+TGG + chr5.3:54959922-54959941 MS.gene009957:intron 30.0%
! TTTTCAACTCGTGTGTTAAT+TGG + chr5.3:54961462-54961481 MS.gene009957:CDS 30.0%
! TTTTGAATGGTTAGATCATG+CGG + chr5.3:54960166-54960185 MS.gene009957:intron 30.0%
! TTTTGTATGGTTAGATCATG+TGG + chr5.3:54960008-54960027 MS.gene009957:intron 30.0%
!! CTAATTTTGGTGAAATTTGG+GGG + chr5.3:54959978-54959997 MS.gene009957:intron 30.0%
!! TTCATGGTTTTCTTGATGAT+GGG + chr5.3:54959923-54959942 MS.gene009957:intron 30.0%
!! TTTATTGATGATGGGTTTGT+GGG + chr5.3:54959787-54959806 MS.gene009957:intron 30.0%
!!! CATGATTTTTGTTGATGATG+GGG + chr5.3:54960235-54960254 MS.gene009957:intron 30.0%
!!! GTGGTTTTGAACACTAATTT+TGG + chr5.3:54959965-54959984 MS.gene009957:intron 30.0%
!!! TCATGATTTTGATGATGATG+GGG + chr5.3:54960081-54960100 MS.gene009957:intron 30.0%
!!! TGACCCCTTTTTTTTTTGTT+TGG + chr5.3:54961610-54961629 MS.gene009957:intron 30.0%
!!! TTTTATTGATGATGGGTTTG+TGG + chr5.3:54959786-54959805 MS.gene009957:intron 30.0%
ACTCCACAAAATAGTGATGT+AGG + chr5.3:54961873-54961892 MS.gene009957:CDS 35.0%
AGGATGAAGATCAATGGAAA+CGG + chr5.3:54959422-54959441 MS.gene009957:CDS 35.0%
AGTCTTCTTCATTCCAATCA+AGG - chr5.3:54960434-54960453 None:intergenic 35.0%
ATATGTCCAAGTTTAACAGC+TGG - chr5.3:54961301-54961320 None:intergenic 35.0%
ATTAGGATAAGGTCTAGACA+AGG + chr5.3:54962017-54962036 MS.gene009957:CDS 35.0%
CATCAGAATATGAACAATCG+AGG + chr5.3:54962168-54962187 MS.gene009957:CDS 35.0%
CTCATATTCATTTACCACAG+TGG - chr5.3:54961955-54961974 None:intergenic 35.0%
CTCCACAAAATAGTGATGTA+GGG + chr5.3:54961874-54961893 MS.gene009957:CDS 35.0%
GACTCTTTCTAATGATAGCA+TGG + chr5.3:54961920-54961939 MS.gene009957:CDS 35.0%
GAGAATAACTTATCATCCCA+TGG - chr5.3:54961350-54961369 None:intergenic 35.0%
GCTGTTACTAACCATCATAT+TGG - chr5.3:54961588-54961607 None:intergenic 35.0%
TACAAAAGATGAGAGTTTGC+AGG + chr5.3:54962346-54962365 MS.gene009957:CDS 35.0%
TGCATATTCTGCCATTGTAA+TGG + chr5.3:54962568-54962587 MS.gene009957:CDS 35.0%
TGTGGTTGTGGTATTTGATA+TGG + chr5.3:54960026-54960045 MS.gene009957:intron 35.0%
TTTATCGATCGTAAGGAACA+AGG + chr5.3:54960282-54960301 MS.gene009957:CDS 35.0%
TTTGTCGATCGAAGATTTCA+TGG + chr5.3:54959907-54959926 MS.gene009957:intron 35.0%
! AACCCTACATCACTATTTTG+TGG - chr5.3:54961879-54961898 None:intergenic 35.0%
! ACATCAGAGTTTAGAAGTAC+CGG + chr5.3:54961128-54961147 MS.gene009957:CDS 35.0%
! CAGTAGCTTTACATTAGTCA+AGG - chr5.3:54960754-54960773 None:intergenic 35.0%
! GTTAAGGTGTCAATTAGAGA+AGG - chr5.3:54961732-54961751 None:intergenic 35.0%
! GTTAGTTTCAGAACACATAG+CGG + chr5.3:54961666-54961685 MS.gene009957:intron 35.0%
! TGACTTTGAGTTAATGATGC+TGG + chr5.3:54960628-54960647 MS.gene009957:intron 35.0%
! TTTTCTTCTGTCCAATGGAT+CGG + chr5.3:54960317-54960336 MS.gene009957:CDS 35.0%
!! AACAACTAATGGGTATTGGA+AGG + chr5.3:54960372-54960391 MS.gene009957:CDS 35.0%
!! GTTCTTTTGATGATTTGGAC+TGG + chr5.3:54959556-54959575 MS.gene009957:intron 35.0%
!!! GATTTGGACTGGTTTTGATT+TGG + chr5.3:54959567-54959586 MS.gene009957:intron 35.0%
!!! TCATGGTTTTCTTGATGATG+GGG + chr5.3:54959924-54959943 MS.gene009957:intron 35.0%
AAAGATCGAAGGATCAAGTC+TGG + chr5.3:54960403-54960422 MS.gene009957:CDS 40.0%
AACAAGCGACAAAGGACATA+TGG - chr5.3:54960856-54960875 None:intergenic 40.0%
AAGATACAGGAACCAGACTT+AGG - chr5.3:54960984-54961003 None:intergenic 40.0%
AAGTTCAAACTGTGGTGAAG+CGG + chr5.3:54960900-54960919 MS.gene009957:CDS 40.0%
AATACAGTCTGACCTAAGTC+TGG + chr5.3:54960969-54960988 MS.gene009957:CDS 40.0%
AATACCCATTAGTTGTTGCG+CGG - chr5.3:54960369-54960388 None:intergenic 40.0%
AATTCGGATACTGTTGTCGA+TGG + chr5.3:54961984-54962003 MS.gene009957:CDS 40.0%
ACAAGCGACAAAGGACATAT+GGG - chr5.3:54960855-54960874 None:intergenic 40.0%
ACACTGGTATAAGGATAAGG+AGG + chr5.3:54962204-54962223 MS.gene009957:CDS 40.0%
AGCATCACATGATTATCCAG+AGG + chr5.3:54961845-54961864 MS.gene009957:CDS 40.0%
AGGTCAGACTGTATTTCTTC+TGG - chr5.3:54960964-54960983 None:intergenic 40.0%
AGTCTTGCAAGTTCAAACTG+TGG + chr5.3:54960892-54960911 MS.gene009957:CDS 40.0%
ATGGAAACGGTGATGAAGTT+TGG + chr5.3:54959435-54959454 MS.gene009957:CDS 40.0%
ATGGTTAGATCATGCGGTTA+TGG + chr5.3:54960172-54960191 MS.gene009957:intron 40.0%
ATGGTTAGATCATGTGGTTG+TGG + chr5.3:54960014-54960033 MS.gene009957:intron 40.0%
CATTTACCACAGTGGTCATT+TGG - chr5.3:54961947-54961966 None:intergenic 40.0%
CCTACCTTAAAAGAGCTTGA+TGG + chr5.3:54960520-54960539 MS.gene009957:CDS 40.0%
GAAAAACTTTCTGTTGGGCA+GGG + chr5.3:54962493-54962512 MS.gene009957:CDS 40.0%
GCATCACATGATTATCCAGA+GGG + chr5.3:54961846-54961865 MS.gene009957:CDS 40.0%
GCTTCTTAAACAAGCGACAA+AGG - chr5.3:54960864-54960883 None:intergenic 40.0%
GGGTCGAAAAACTTTCTGTT+GGG + chr5.3:54962488-54962507 MS.gene009957:CDS 40.0%
GTGACACTGGTATAAGGATA+AGG + chr5.3:54962201-54962220 MS.gene009957:CDS 40.0%
TACCTTGTGCTTGAATCACT+GGG - chr5.3:54962265-54962284 None:intergenic 40.0%
TACTAGCGAGACCATTACAA+TGG - chr5.3:54962582-54962601 None:intergenic 40.0%
TGAATCACTGGGTTCATGTT+TGG - chr5.3:54962254-54962273 None:intergenic 40.0%
TGGAAACGGTGATGAAGTTT+GGG + chr5.3:54959436-54959455 MS.gene009957:CDS 40.0%
TGTGGAAATGGCCAATATGA+TGG + chr5.3:54961574-54961593 MS.gene009957:CDS 40.0%
! AATAAAGGTACACGGAGTTG+TGG - chr5.3:54960727-54960746 None:intergenic 40.0%
! CTCATCTTTTGTAGTCTCCT+CGG - chr5.3:54962339-54962358 None:intergenic 40.0%
! GTGGTTTTTCTTCTGTCCAA+TGG + chr5.3:54960312-54960331 MS.gene009957:CDS 40.0%
! TTGTGGGTGAATTTTGTTGC+AGG + chr5.3:54959803-54959822 MS.gene009957:intron 40.0%
! TTTTGTTGCAGGTTTAACGG+TGG + chr5.3:54959814-54959833 MS.gene009957:intron 40.0%
!! TTTGATGATGATGGGGTTTG+TGG + chr5.3:54960088-54960107 MS.gene009957:intron 40.0%
!!! AAGACTCTTGTTTTCTACGC+TGG + chr5.3:54960448-54960467 MS.gene009957:CDS 40.0%
!!! CCATCAAGCTCTTTTAAGGT+AGG - chr5.3:54960523-54960542 None:intergenic 40.0%
AACCCAGTGATTCAAGCACA+AGG + chr5.3:54962260-54962279 MS.gene009957:CDS 45.0%
AATCAGCTGGGGTTATAACG+TGG - chr5.3:54961074-54961093 None:intergenic 45.0%
ACAACTGCAGAATCCAACGT+GGG + chr5.3:54962467-54962486 MS.gene009957:CDS 45.0%
ACAGATCTCTCTTGCTGACA+TGG - chr5.3:54962435-54962454 None:intergenic 45.0%
ACGATTTGAGCTTGAGCCAT+GGG + chr5.3:54961331-54961350 MS.gene009957:CDS 45.0%
AGATGAGAGTTTGCAGGAGA+CGG + chr5.3:54962352-54962371 MS.gene009957:CDS 45.0%
AGGCAACAGGAAAAGATCGA+AGG + chr5.3:54960392-54960411 MS.gene009957:CDS 45.0%
ATCAGCTGGGGTTATAACGT+GGG - chr5.3:54961073-54961092 None:intergenic 45.0%
ATCGCTATAGCAATCAGCTG+GGG - chr5.3:54961085-54961104 None:intergenic 45.0%
ATGGCTCAAGCTCAAATCGT+GGG - chr5.3:54961331-54961350 None:intergenic 45.0%
ATTGCTTCCTCAGAGTTCTC+AGG - chr5.3:54961048-54961067 None:intergenic 45.0%
CACTAGCGACAGAAGATGAA+AGG + chr5.3:54961007-54961026 MS.gene009957:CDS 45.0%
CAGATCTCTCTTGCTGACAT+GGG - chr5.3:54962434-54962453 None:intergenic 45.0%
CATCGCTATAGCAATCAGCT+GGG - chr5.3:54961086-54961105 None:intergenic 45.0%
CCTCCTAATCGTATTCTACG+CGG - chr5.3:54962293-54962312 None:intergenic 45.0%
CGAAAAACTTTCTGTTGGGC+AGG + chr5.3:54962492-54962511 MS.gene009957:CDS 45.0%
CGACGGTAAACACTCAACTA+CGG - chr5.3:54959303-54959322 None:intergenic 45.0%
CTACCTTGTGCTTGAATCAC+TGG - chr5.3:54962266-54962285 None:intergenic 45.0%
CTCCTAATCGTATTCTACGC+GGG - chr5.3:54962292-54962311 None:intergenic 45.0%
GACAAAGGACATATGGGTTC+TGG - chr5.3:54960849-54960868 None:intergenic 45.0%
GCACACTTTCCACCAGAATT+TGG + chr5.3:54961380-54961399 MS.gene009957:CDS 45.0%
GCACCAAGGAGAATACGATT+GGG + chr5.3:54962089-54962108 MS.gene009957:CDS 45.0%
GGAAGACCAGCTGTTAAACT+TGG + chr5.3:54961292-54961311 MS.gene009957:intron 45.0%
GGACAGAAGAAAAACCACTC+TGG - chr5.3:54960310-54960329 None:intergenic 45.0%
GGGAGATGTCTTCTCTGAAT+CGG - chr5.3:54962414-54962433 None:intergenic 45.0%
GGGGTCGAAAAACTTTCTGT+TGG + chr5.3:54962487-54962506 MS.gene009957:CDS 45.0%
TAAGGAACAAGGATCCAGAG+TGG + chr5.3:54960293-54960312 MS.gene009957:CDS 45.0%
TACAACTGCAGAATCCAACG+TGG + chr5.3:54962466-54962485 MS.gene009957:CDS 45.0%
TCCACCAGAATTTGGCTATC+AGG + chr5.3:54961388-54961407 MS.gene009957:CDS 45.0%
TCCTAATCGTATTCTACGCG+GGG - chr5.3:54962291-54962310 None:intergenic 45.0%
TGAACAACCAGACATGAACC+CGG + chr5.3:54962046-54962065 MS.gene009957:CDS 45.0%
TGAACCGCGCAACAACTAAT+GGG + chr5.3:54960362-54960381 MS.gene009957:CDS 45.0%
TGCACCAAGGAGAATACGAT+TGG + chr5.3:54962088-54962107 MS.gene009957:CDS 45.0%
TGGACAGTGACACTGGTATA+AGG + chr5.3:54962195-54962214 MS.gene009957:CDS 45.0%
TGTAGTCTCCTCGGAAACAA+GGG - chr5.3:54962330-54962349 None:intergenic 45.0%
TTCATCTTCTGTCGCTAGTG+AGG - chr5.3:54961007-54961026 None:intergenic 45.0%
TTCGGATACTTCCGATCCAT+TGG - chr5.3:54960331-54960350 None:intergenic 45.0%
TTGAACCGCGCAACAACTAA+TGG + chr5.3:54960361-54960380 MS.gene009957:CDS 45.0%
TTGCTTCCTCAGAGTTCTCA+GGG - chr5.3:54961047-54961066 None:intergenic 45.0%
TTGGCCTGATAGCCAAATTC+TGG - chr5.3:54961395-54961414 None:intergenic 45.0%
TTGTAGTCTCCTCGGAAACA+AGG - chr5.3:54962331-54962350 None:intergenic 45.0%
! AGGATTTTGGACAGTGACAC+TGG + chr5.3:54962188-54962207 MS.gene009957:CDS 45.0%
! ATTCTGGTGGAAAGTGTGCA+TGG - chr5.3:54961379-54961398 None:intergenic 45.0%
! GCGCAACAACTAATGGGTAT+TGG + chr5.3:54960368-54960387 MS.gene009957:CDS 45.0%
! TTCTGGTGGAAAGTGTGCAT+GGG - chr5.3:54961378-54961397 None:intergenic 45.0%
!! AAAGTTTTTCGACCCCACGT+TGG - chr5.3:54962483-54962502 None:intergenic 45.0%
!! AAGTCTGGTGCTACCTTGAT+TGG + chr5.3:54960418-54960437 MS.gene009957:CDS 45.0%
!! AATGGGTATTGGAAGGCAAC+AGG + chr5.3:54960379-54960398 MS.gene009957:CDS 45.0%
!! ATGGATCGGAAGTATCCGAA+TGG + chr5.3:54960331-54960350 MS.gene009957:CDS 45.0%
!! GCTTGTTGTAGGTTTATCGG+TGG + chr5.3:54959946-54959965 MS.gene009957:intron 45.0%
!! GGGGCTTGTTGTAGGTTTAT+CGG + chr5.3:54959943-54959962 MS.gene009957:intron 45.0%
!! GGTGCCATCAAGCTCTTTTA+AGG - chr5.3:54960527-54960546 None:intergenic 45.0%
!! TGGATCGGAAGTATCCGAAT+GGG + chr5.3:54960332-54960351 MS.gene009957:CDS 45.0%
!! TTGATGATGGGGCTTGTTGT+AGG + chr5.3:54959935-54959954 MS.gene009957:intron 45.0%
!!! CTCTTGTTTTCTACGCTGGT+CGG + chr5.3:54960452-54960471 MS.gene009957:CDS 45.0%
!!! TCTTGTTTTCTACGCTGGTC+GGG + chr5.3:54960453-54960472 MS.gene009957:CDS 45.0%
AAGACTGATAGACGCCTCAC+TGG - chr5.3:54961498-54961517 None:intergenic 50.0%
ACTTTCTGTTGGGCAGGGTT+CGG + chr5.3:54962498-54962517 MS.gene009957:CDS 50.0%
AGATGAGAGTAGACCTGTCC+AGG - chr5.3:54960553-54960572 None:intergenic 50.0%
AGCTATCCCTGAGAACTCTG+AGG + chr5.3:54961038-54961057 MS.gene009957:CDS 50.0%
AGTAGACCGCATAGCGCTAA+TGG - chr5.3:54962543-54962562 None:intergenic 50.0%
AGTTCTCAGGGATAGCTGCT+AGG - chr5.3:54961035-54961054 None:intergenic 50.0%
CAACTGCAGAATCCAACGTG+GGG + chr5.3:54962468-54962487 MS.gene009957:CDS 50.0%
CACGATTTGAGCTTGAGCCA+TGG + chr5.3:54961330-54961349 MS.gene009957:CDS 50.0%
CACTGAACAAGCTGCCGTTA+GGG + chr5.3:54959354-54959373 MS.gene009957:CDS 50.0%
CATCCTCCATTAGCGCTATG+CGG + chr5.3:54962534-54962553 MS.gene009957:CDS 50.0%
CATGGCTCAAGCTCAAATCG+TGG - chr5.3:54961332-54961351 None:intergenic 50.0%
CCAAGGAGAATACGATTGGG+AGG + chr5.3:54962092-54962111 MS.gene009957:CDS 50.0%
CCGCGTAGAATACGATTAGG+AGG + chr5.3:54962290-54962309 MS.gene009957:CDS 50.0%
CCTCCCAATCGTATTCTCCT+TGG - chr5.3:54962095-54962114 None:intergenic 50.0%
CGGTTCAATCTGCTCCCATT+CGG - chr5.3:54960349-54960368 None:intergenic 50.0%
CGTCGTCTCCTCAGAAACAA+GGG - chr5.3:54962132-54962151 None:intergenic 50.0%
CTCTTACCAGGCAAATCCCA+AGG - chr5.3:54959494-54959513 None:intergenic 50.0%
CTTCCTTGTGCTTGCATCAC+CGG - chr5.3:54962068-54962087 None:intergenic 50.0%
GATGAGAGTAGACCTGTCCA+GGG - chr5.3:54960552-54960571 None:intergenic 50.0%
GCATCGCTATAGCAATCAGC+TGG - chr5.3:54961087-54961106 None:intergenic 50.0%
GCCTGATAGCCAAATTCTGG+TGG - chr5.3:54961392-54961411 None:intergenic 50.0%
GGAGAGTAATTGGCAGTCGT+AGG - chr5.3:54960943-54960962 None:intergenic 50.0%
GTCGCTAGTGAGGAAGATAC+AGG - chr5.3:54960997-54961016 None:intergenic 50.0%
TCAACAAGCTCCTCGTCAGT+AGG - chr5.3:54959392-54959411 None:intergenic 50.0%
TCACTGAACAAGCTGCCGTT+AGG + chr5.3:54959353-54959372 MS.gene009957:CDS 50.0%
TCGGATACTGTTGTCGATGG+CGG + chr5.3:54961987-54962006 MS.gene009957:CDS 50.0%
TTCCTTGTGCTTGCATCACC+GGG - chr5.3:54962067-54962086 None:intergenic 50.0%
TTTACCGTCGTCGCAACAAG+CGG + chr5.3:54959313-54959332 MS.gene009957:CDS 50.0%
TTTGAGCCTTGGGATTTGCC+TGG + chr5.3:54959485-54959504 MS.gene009957:CDS 50.0%
! AAGCACAAGGAAGTGCACCA+AGG + chr5.3:54962075-54962094 MS.gene009957:CDS 50.0%
! CAAGCATTCCCTTGTTTCCG+AGG + chr5.3:54962319-54962338 MS.gene009957:CDS 50.0%
! GCGGCACTGGAATTAGGATA+AGG + chr5.3:54962006-54962025 MS.gene009957:CDS 50.0%
! TTTTGTGGAGTCACTCCCTC+TGG - chr5.3:54961864-54961883 None:intergenic 50.0%
!! CCTTGTTTCTGAGGAGACGA+CGG + chr5.3:54962130-54962149 MS.gene009957:CDS 50.0%
!! TTTAGAAGTACCGGCTGCAG+AGG + chr5.3:54961137-54961156 MS.gene009957:CDS 50.0%
AAATGGGTCGTGCAGCGACT+CGG + chr5.3:54961550-54961569 MS.gene009957:CDS 55.0%
AACCCGGTGATGCAAGCACA+AGG + chr5.3:54962062-54962081 MS.gene009957:CDS 55.0%
ACCGGCTGCAGAGGTAAGAT+GGG + chr5.3:54961146-54961165 MS.gene009957:intron 55.0%
AGACCGCATAGCGCTAATGG+AGG - chr5.3:54962540-54962559 None:intergenic 55.0%
AGAGTAGACCTGTCCAGGGT+TGG - chr5.3:54960548-54960567 None:intergenic 55.0%
CAATGAGTCCTCGTCCCCTT+CGG - chr5.3:54960481-54960500 None:intergenic 55.0%
CATGGGCCAAATGACCACTG+TGG + chr5.3:54961938-54961957 MS.gene009957:CDS 55.0%
CCGTCGTCTCCTCAGAAACA+AGG - chr5.3:54962133-54962152 None:intergenic 55.0%
CTGAGGAGACGACGGAAGAT+GGG + chr5.3:54962138-54962157 MS.gene009957:CDS 55.0%
GAAGGGGACGAGGACTCATT+GGG + chr5.3:54960480-54960499 MS.gene009957:CDS 55.0%
GCCCCGCGTAGAATACGATT+AGG + chr5.3:54962287-54962306 MS.gene009957:CDS 55.0%
TCTGAGGAGACGACGGAAGA+TGG + chr5.3:54962137-54962156 MS.gene009957:CDS 55.0%
TGCATCACCGGGTTCATGTC+TGG - chr5.3:54962056-54962075 None:intergenic 55.0%
TTGGGACGAGTTCTCCAGTG+AGG + chr5.3:54961481-54961500 MS.gene009957:CDS 55.0%
! CAGCGACTCGGATGTGGAAA+TGG + chr5.3:54961562-54961581 MS.gene009957:CDS 55.0%
! GTGGAAAGTGTGCATGGGCT+GGG - chr5.3:54961373-54961392 None:intergenic 55.0%
! TACCGGCTGCAGAGGTAAGA+TGG + chr5.3:54961145-54961164 MS.gene009957:intron 55.0%
! TCGATGGCGGCACTGGAATT+AGG + chr5.3:54962000-54962019 MS.gene009957:CDS 55.0%
! TCGCTGCACGACCCATTTTC+TGG - chr5.3:54961548-54961567 None:intergenic 55.0%
! TGGAAAGTGTGCATGGGCTG+GGG - chr5.3:54961372-54961391 None:intergenic 55.0%
!! TGCGCGTTCCCTTGTTTCTG+AGG + chr5.3:54962121-54962140 MS.gene009957:CDS 55.0%
CAAGCTCCTCGTCAGTAGGC+CGG - chr5.3:54959388-54959407 None:intergenic 60.0%
CAGCACTCTCAGCAGCAGCA+TGG - chr5.3:54962391-54962410 None:intergenic 60.0%
CGAAGGGGACGAGGACTCAT+TGG + chr5.3:54960479-54960498 MS.gene009957:CDS 60.0%
GCCCATCTTACCTCTGCAGC+CGG - chr5.3:54961150-54961169 None:intergenic 60.0%
TGATGGCACCAACCCTGGAC+AGG + chr5.3:54960537-54960556 MS.gene009957:CDS 60.0%
TGCCGTTAGGGTTCCGCTTC+CGG + chr5.3:54959366-54959385 MS.gene009957:CDS 60.0%
! ACTGTTGTCGATGGCGGCAC+TGG + chr5.3:54961993-54962012 MS.gene009957:CDS 60.0%
! GAGCTTGATGGCACCAACCC+TGG + chr5.3:54960532-54960551 MS.gene009957:CDS 60.0%
! GGTGGAAAGTGTGCATGGGC+TGG - chr5.3:54961374-54961393 None:intergenic 60.0%
! TCCTCCGCTTGTTGCGACGA+CGG - chr5.3:54959320-54959339 None:intergenic 60.0%
ACCGTCGTCGCAACAAGCGG+AGG + chr5.3:54959316-54959335 MS.gene009957:CDS 65.0%
CCTCGTCAGTAGGCCGGAAG+CGG - chr5.3:54959382-54959401 None:intergenic 65.0%
GCAACAAGCGGAGGAGCTGG+CGG + chr5.3:54959325-54959344 MS.gene009957:CDS 65.0%
GGCCGGAAGCGGAACCCTAA+CGG - chr5.3:54959371-54959390 None:intergenic 65.0%
GTCGCAACAAGCGGAGGAGC+TGG + chr5.3:54959322-54959341 MS.gene009957:CDS 65.0%
TACGCTGGTCGGGCTCCGAA+GGG + chr5.3:54960463-54960482 MS.gene009957:CDS 65.0%
! GTCGTGCAGCGACTCGGATG+TGG + chr5.3:54961556-54961575 MS.gene009957:CDS 65.0%
ACGCTGGTCGGGCTCCGAAG+GGG + chr5.3:54960464-54960483 MS.gene009957:CDS 70.0%
CCGCTTCCGGCCTACTGACG+AGG + chr5.3:54959379-54959398 MS.gene009957:CDS 70.0%
CTACGCTGGTCGGGCTCCGA+AGG + chr5.3:54960462-54960481 MS.gene009957:CDS 70.0%
GTCGGGCTCCGAAGGGGACG+AGG + chr5.3:54960470-54960489 MS.gene009957:CDS 75.0%


Chromosome Type Strat End Strand Name
chr5.3 gene 54959293 54962649 54959293 ID=MS.gene009957
chr5.3 mRNA 54959293 54962649 54959293 ID=MS.gene009957.t1;Parent=MS.gene009957
chr5.3 exon 54959293 54959506 54959293 ID=MS.gene009957.t1.exon1;Parent=MS.gene009957.t1
chr5.3 CDS 54959293 54959506 54959293 ID=cds.MS.gene009957.t1;Parent=MS.gene009957.t1
chr5.3 exon 54960281 54960558 54960281 ID=MS.gene009957.t1.exon2;Parent=MS.gene009957.t1
chr5.3 CDS 54960281 54960558 54960281 ID=cds.MS.gene009957.t1;Parent=MS.gene009957.t1
chr5.3 exon 54960850 54961158 54960850 ID=MS.gene009957.t1.exon3;Parent=MS.gene009957.t1
chr5.3 CDS 54960850 54961158 54960850 ID=cds.MS.gene009957.t1;Parent=MS.gene009957.t1
chr5.3 exon 54961293 54961595 54961293 ID=MS.gene009957.t1.exon4;Parent=MS.gene009957.t1
chr5.3 CDS 54961293 54961595 54961293 ID=cds.MS.gene009957.t1;Parent=MS.gene009957.t1
chr5.3 exon 54961837 54962649 54961837 ID=MS.gene009957.t1.exon5;Parent=MS.gene009957.t1
chr5.3 CDS 54961837 54962649 54961837 ID=cds.MS.gene009957.t1;Parent=MS.gene009957.t1
Gene Sequence

>MS.gene009957

ATGGGTGCCGTAGTTGAGTGTTTACCGTCGTCGCAACAAGCGGAGGAGCTGGCGGTTCTGTCACTGAACAAGCTGCCGTTAGGGTTCCGCTTCCGGCCTACTGACGAGGAGCTTGTTGATTTTTATTTAAGGATGAAGATCAATGGAAACGGTGATGAAGTTTGGGTTATTCGTGAAGTTGATGTTTGTAAATTTGAGCCTTGGGATTTGCCTGGTAAGAGAAATTTTTTTTATCTTTAATTGTTTCTTGAATTTAGTTTTTTGTTCTTTTGATGATTTGGACTGGTTTTGATTTGGATAAGTGATTGTTGTTGACTACATTTTGATTGTGATCGTTTGTGTTTGATATGTAAATTTATAAGTGGCTGTTATTTTATTTTGTTTTGTTTTACTGTTTCTGTGTAATTTTGCATGTTGAATGAGTTTTTTTTTTTTCTATGGAATTTTTTTGATTTTTAATGGTTAAATGTGGTTATGATATTTGATTTGATGATTTTATTGATGATGGGTTTGTGGGTGAATTTTGTTGCAGGTTTAACGGTGGTAATGAACATTAGTTTTGTTGAAAATTAGGGAAAATTAATCTTGAATGGTTACGATATGATGATTTTGTTTTTGTCGATCGAAGATTTCATGGTTTTCTTGATGATGGGGCTTGTTGTAGGTTTATCGGTGGTTTTGAACACTAATTTTGGTGAAATTTGGGGGAAATTAATTTTGTATGGTTAGATCATGTGGTTGTGGTATTTGATATGGTGATTTTGTTATGTTATTGTTGACTGAAAATTTCATGATTTTGATGATGATGGGGTTTGTGGTGTTTTTGTTGTAGATTTATCAAAGCTACTGAACAATAATTTTTGTGAGAATTAATTTTGAATGGTTAGATCATGCGGTTATGGCATTTGATATGATGATTTTGTTTTTGTTAAGTAAAAATTTCATGATTTTTGTTGATGATGGGGTTTATGTTTTTTTCTTTTTGTAGATTTATCGATCGTAAGGAACAAGGATCCAGAGTGGTTTTTCTTCTGTCCAATGGATCGGAAGTATCCGAATGGGAGCAGATTGAACCGCGCAACAACTAATGGGTATTGGAAGGCAACAGGAAAAGATCGAAGGATCAAGTCTGGTGCTACCTTGATTGGAATGAAGAAGACTCTTGTTTTCTACGCTGGTCGGGCTCCGAAGGGGACGAGGACTCATTGGGTTATGCATGAATATAGACCTACCTTAAAAGAGCTTGATGGCACCAACCCTGGACAGGTCTACTCTCATCTCCTCTCTTTTTTATTTTATGTTTGGTTTTAATGACTGATTTGAAGTATTTGTTGCTGACTTTGAGTTAATGATGCTGGTTGTTGTAACTTGATTCTAATTCTATATGTTCATTGTGTTGCATAATTTTTTCAATGCACTTCATTACATCTACCACAACTCCGTGTACCTTTATTTTGTCCTTGACTAATGTAAAGCTACTGTGATTTATGACTGCCTAAGCAATTATAGATAATTATGTTTCTAACTTCTCAACATGGTTGATTTGACTTATGCCAGAACCCATATGTCCTTTGTCGCTTGTTTAAGAAGCAAGATGAGAGTCTTGCAAGTTCAAACTGTGGTGAAGCGGAGCAGACTACTTCAACTCCTACGACTGCCAATTACTCTCCAGAAGAAATACAGTCTGACCTAAGTCTGGTTCCTGTATCTTCCTCACTAGCGACAGAAGATGAAAGGCACCTAGCAGCTATCCCTGAGAACTCTGAGGAAGCAATGTCCCACGTTATAACCCCAGCTGATTGCTATAGCGATGCATGTAATGCTTCTGATGCACAACATCAGAGTTTAGAAGTACCGGCTGCAGAGGTAAGATGGGCTAACTGTAACTGAGTTTAATCTTTTATTTGTTCCTTTAATGTTTTATTTGAATGATCCTTCTATTGATTTGAAGTCACTGAATTTGTTGATTTCGTAACTATACTTGATGTTAACTATTTCAGGAAGACCAGCTGTTAAACTTGGACATATTTGATAGCCCACGATTTGAGCTTGAGCCATGGGATGATAAGTTATTCTCCCCAGCCCATGCACACTTTCCACCAGAATTTGGCTATCAGGCCAACAATGAATTAATTCAGTATGGTACAAACGGGACAGATGTTTCAGACTTTTTCAACTCGTGTGTTAATTGGGACGAGTTCTCCAGTGAGGCGTCTATCAGTCTTGATCTGAGCCCAACCATTTTTAAAATTCCAGAAAATGGGTCGTGCAGCGACTCGGATGTGGAAATGGCCAATATGATGGTTAGTAACAGCTCTGACCCCTTTTTTTTTTGTTTGGTCATTCTAGATTTCTGCCATCAGAATGCAATTTGTTAGTTTCAGAACACATAGCGGCAGTTCTAACCTTTTCCTGTTAATGTTCTTAAGCTAATTGCCTTCTCTAATTGACACCTTAACACAAATTTTATTGTATATATGTCGGCATATTTAGTTATGTTTTCTAATACCATGGGTATAATTTAAATCTGATTGTATGCTGCAGAATCTGCTAGCATCACATGATTATCCAGAGGGAGTGACTCCACAAAATAGTGATGTAGGGTTGTTTCAGAACAATTCCCAGATGACTCTTTCTAATGATAGCATGGGCCAAATGACCACTGTGGTAAATGAATATGAGCAAATGTGGAATTCGGATACTGTTGTCGATGGCGGCACTGGAATTAGGATAAGGTCTAGACAAGGACAAAGTGAACAACCAGACATGAACCCGGTGATGCAAGCACAAGGAAGTGCACCAAGGAGAATACGATTGGGAGGATTTGTTGCGCGTTCCCTTGTTTCTGAGGAGACGACGGAAGATGGGAGTTGTGCATCAGAATATGAACAATCGAGGATTTTGGACAGTGACACTGGTATAAGGATAAGGAGGACTCGACAAAGAAGAAATGAAGAGCCAAACATGAACCCAGTGATTCAAGCACAAGGTAGTGCCCCGCGTAGAATACGATTAGGAGGATTTGTCAAGCATTCCCTTGTTTCCGAGGAGACTACAAAAGATGAGAGTTTGCAGGAGACGGAAGCTTCAGAAAACCATGCTGCTGCTGAGAGTGCTGCCGATTCAGAGAAGACATCTCCCATGTCAGCAAGAGAGATCTGTGAGCAACATGTTACAACTGCAGAATCCAACGTGGGGTCGAAAAACTTTCTGTTGGGCAGGGTTCGGTGCACTTCAAAGACATCCTCCATTAGCGCTATGCGGTCTACTGTTCTTGCATATTCTGCCATTGTAATGGTCTCGCTAGTATTGCTTGTTAATATTTGGGGATATCTTAGATTTAGAAATGCTTACTAG
Protein sequence

>MS.gene009957.t1

MGAVVECLPSSQQAEELAVLSLNKLPLGFRFRPTDEELVDFYLRMKINGNGDEVWVIREVDVCKFEPWDLPDLSIVRNKDPEWFFFCPMDRKYPNGSRLNRATTNGYWKATGKDRRIKSGATLIGMKKTLVFYAGRAPKGTRTHWVMHEYRPTLKELDGTNPGQNPYVLCRLFKKQDESLASSNCGEAEQTTSTPTTANYSPEEIQSDLSLVPVSSSLATEDERHLAAIPENSEEAMSHVITPADCYSDACNASDAQHQSLEVPAAEEDQLLNLDIFDSPRFELEPWDDKLFSPAHAHFPPEFGYQANNELIQYGTNGTDVSDFFNSCVNWDEFSSEASISLDLSPTIFKIPENGSCSDSDVEMANMMNLLASHDYPEGVTPQNSDVGLFQNNSQMTLSNDSMGQMTTVVNEYEQMWNSDTVVDGGTGIRIRSRQGQSEQPDMNPVMQAQGSAPRRIRLGGFVARSLVSEETTEDGSCASEYEQSRILDSDTGIRIRRTRQRRNEEPNMNPVIQAQGSAPRRIRLGGFVKHSLVSEETTKDESLQETEASENHAAAESAADSEKTSPMSAREICEQHVTTAESNVGSKNFLLGRVRCTSKTSSISAMRSTVLAYSAIVMVSLVLLVNIWGYLRFRNAY