Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene010009.t1 | XP_024639581.1 | 95.6 | 1673 | 58 | 6 | 1 | 1664 | 1 | 1666 | 0.00E+00 | 3159.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene010009.t1 | Q149N8 | 30.4 | 1237 | 620 | 33 | 411 | 1623 | 658 | 1677 | 1.6e-135 | 486.1 |
MS.gene010009.t1 | Q149N8 | 43.5 | 108 | 56 | 2 | 282 | 389 | 298 | 400 | 1.4e-11 | 74.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene010009.t1 | G7KD91 | 95.6 | 1673 | 58 | 6 | 1 | 1664 | 1 | 1666 | 0.0e+00 | 3159.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene010009.t1 | TR | PHD |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene010009.t1 | MTR_5g067980 | 95.457 | 1673 | 60 | 6 | 1 | 1664 | 1 | 1666 | 0.0 | 3237 |
MS.gene010009.t1 | MTR_1g044120 | 30.743 | 296 | 147 | 11 | 494 | 782 | 590 | 834 | 3.22e-32 | 137 |
MS.gene010009.t1 | MTR_1g044120 | 26.562 | 320 | 181 | 12 | 1321 | 1622 | 870 | 1153 | 1.21e-19 | 96.7 |
MS.gene010009.t1 | MTR_2g084630 | 28.383 | 303 | 167 | 6 | 491 | 789 | 480 | 736 | 3.69e-31 | 134 |
MS.gene010009.t1 | MTR_2g084630 | 29.412 | 289 | 161 | 11 | 1326 | 1608 | 757 | 1008 | 3.08e-24 | 111 |
MS.gene010009.t1 | MTR_2g084630 | 28.383 | 303 | 167 | 6 | 491 | 789 | 474 | 730 | 4.82e-31 | 133 |
MS.gene010009.t1 | MTR_2g084630 | 28.082 | 292 | 170 | 12 | 1326 | 1608 | 751 | 1011 | 7.59e-20 | 97.4 |
MS.gene010009.t1 | MTR_1g115215 | 27.041 | 392 | 205 | 13 | 485 | 838 | 393 | 741 | 1.60e-23 | 109 |
MS.gene010009.t1 | MTR_1g115215 | 32.877 | 146 | 83 | 3 | 1460 | 1594 | 868 | 1009 | 9.93e-17 | 87.0 |
MS.gene010009.t1 | MTR_2g012830 | 26.957 | 345 | 184 | 9 | 476 | 782 | 637 | 951 | 9.95e-23 | 107 |
MS.gene010009.t1 | MTR_2g012830 | 31.210 | 157 | 100 | 4 | 1468 | 1621 | 1150 | 1301 | 8.51e-15 | 80.9 |
MS.gene010009.t1 | MTR_7g089190 | 27.083 | 336 | 188 | 8 | 445 | 780 | 251 | 529 | 1.36e-22 | 105 |
MS.gene010009.t1 | MTR_7g089190 | 26.471 | 272 | 173 | 8 | 1355 | 1622 | 573 | 821 | 9.07e-18 | 90.1 |
MS.gene010009.t1 | MTR_4g049500 | 28.315 | 279 | 169 | 10 | 1352 | 1622 | 679 | 934 | 3.14e-21 | 101 |
MS.gene010009.t1 | MTR_8g094070 | 29.032 | 155 | 105 | 2 | 1468 | 1622 | 759 | 908 | 3.88e-15 | 82.0 |
MS.gene010009.t1 | MTR_8g094070 | 29.032 | 155 | 105 | 2 | 1468 | 1622 | 759 | 908 | 4.50e-15 | 81.6 |
MS.gene010009.t1 | MTR_1g035330 | 32.192 | 146 | 93 | 2 | 1449 | 1594 | 571 | 710 | 5.48e-15 | 81.3 |
MS.gene010009.t1 | MTR_5g020000 | 27.647 | 170 | 116 | 3 | 1449 | 1616 | 507 | 671 | 1.76e-13 | 76.3 |
MS.gene010009.t1 | MTR_4g118720 | 35.088 | 171 | 93 | 7 | 1449 | 1609 | 1325 | 1487 | 2.99e-13 | 76.3 |
MS.gene010009.t1 | MTR_7g090960 | 25.166 | 302 | 165 | 10 | 494 | 784 | 628 | 879 | 7.56e-13 | 74.7 |
MS.gene010009.t1 | MTR_7g090960 | 31.098 | 164 | 103 | 4 | 1460 | 1621 | 1204 | 1359 | 1.10e-12 | 73.9 |
MS.gene010009.t1 | MTR_7g090960 | 25.166 | 302 | 165 | 10 | 494 | 784 | 547 | 798 | 8.53e-13 | 74.3 |
MS.gene010009.t1 | MTR_7g090960 | 31.098 | 164 | 103 | 4 | 1460 | 1621 | 1123 | 1278 | 1.07e-12 | 73.9 |
MS.gene010009.t1 | MTR_3g106210 | 29.091 | 165 | 105 | 5 | 1458 | 1617 | 618 | 775 | 8.56e-13 | 74.3 |
MS.gene010009.t1 | MTR_3g106210 | 29.091 | 165 | 105 | 5 | 1458 | 1617 | 618 | 775 | 8.71e-13 | 74.3 |
MS.gene010009.t1 | MTR_3g106210 | 29.091 | 165 | 105 | 5 | 1458 | 1617 | 618 | 775 | 1.15e-12 | 73.9 |
MS.gene010009.t1 | MTR_3g106210 | 29.091 | 165 | 105 | 5 | 1458 | 1617 | 618 | 775 | 1.15e-12 | 73.9 |
MS.gene010009.t1 | MTR_1g069755 | 27.397 | 219 | 138 | 7 | 1409 | 1621 | 698 | 901 | 1.18e-12 | 73.9 |
MS.gene010009.t1 | MTR_4g035100 | 30.625 | 160 | 104 | 4 | 1468 | 1624 | 1830 | 1985 | 2.74e-12 | 72.8 |
MS.gene010009.t1 | MTR_4g035100 | 30.625 | 160 | 104 | 4 | 1468 | 1624 | 1830 | 1985 | 2.83e-12 | 72.8 |
MS.gene010009.t1 | MTR_1g013190 | 26.627 | 169 | 111 | 5 | 1449 | 1612 | 609 | 769 | 5.78e-12 | 71.6 |
MS.gene010009.t1 | MTR_5g004720 | 32.609 | 138 | 88 | 2 | 1453 | 1589 | 542 | 675 | 6.24e-12 | 71.2 |
MS.gene010009.t1 | MTR_4g078460 | 29.012 | 162 | 105 | 4 | 1449 | 1607 | 808 | 962 | 1.64e-11 | 70.1 |
MS.gene010009.t1 | MTR_4g078495 | 29.012 | 162 | 105 | 4 | 1449 | 1607 | 522 | 676 | 2.11e-11 | 69.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene010009.t1 | AT2G40770 | 57.640 | 1695 | 642 | 28 | 1 | 1661 | 1 | 1653 | 0.0 | 1837 |
MS.gene010009.t1 | AT2G40770 | 57.640 | 1695 | 642 | 28 | 1 | 1661 | 1 | 1653 | 0.0 | 1837 |
MS.gene010009.t1 | AT2G40770 | 57.640 | 1695 | 642 | 28 | 1 | 1661 | 1 | 1653 | 0.0 | 1837 |
MS.gene010009.t1 | AT5G22750 | 27.938 | 519 | 242 | 15 | 284 | 789 | 344 | 743 | 1.31e-42 | 171 |
MS.gene010009.t1 | AT5G22750 | 30.882 | 272 | 150 | 11 | 1340 | 1608 | 779 | 1015 | 1.56e-23 | 109 |
MS.gene010009.t1 | AT5G43530 | 32.000 | 300 | 142 | 10 | 492 | 782 | 739 | 985 | 5.05e-32 | 137 |
MS.gene010009.t1 | AT5G43530 | 29.150 | 247 | 127 | 7 | 1355 | 1591 | 1040 | 1248 | 1.22e-21 | 103 |
MS.gene010009.t1 | AT1G61140 | 25.641 | 468 | 231 | 15 | 349 | 782 | 571 | 955 | 1.31e-28 | 126 |
MS.gene010009.t1 | AT1G61140 | 30.769 | 156 | 102 | 3 | 1468 | 1621 | 1125 | 1276 | 1.53e-15 | 83.6 |
MS.gene010009.t1 | AT1G61140 | 25.641 | 468 | 231 | 15 | 349 | 782 | 413 | 797 | 1.46e-28 | 125 |
MS.gene010009.t1 | AT1G61140 | 30.769 | 156 | 102 | 3 | 1468 | 1621 | 967 | 1118 | 1.61e-15 | 83.2 |
MS.gene010009.t1 | AT1G61140 | 25.641 | 468 | 231 | 15 | 349 | 782 | 578 | 962 | 1.50e-28 | 125 |
MS.gene010009.t1 | AT1G11100 | 29.568 | 301 | 151 | 9 | 493 | 782 | 489 | 739 | 3.23e-25 | 114 |
MS.gene010009.t1 | AT1G11100 | 32.308 | 130 | 78 | 2 | 1468 | 1594 | 930 | 1052 | 2.64e-15 | 82.4 |
MS.gene010009.t1 | AT1G11100 | 29.568 | 301 | 151 | 9 | 493 | 782 | 632 | 882 | 3.33e-25 | 115 |
MS.gene010009.t1 | AT1G11100 | 32.308 | 130 | 78 | 2 | 1468 | 1594 | 1073 | 1195 | 2.56e-15 | 82.8 |
MS.gene010009.t1 | AT1G50410 | 29.394 | 330 | 165 | 12 | 493 | 784 | 342 | 641 | 7.92e-25 | 113 |
MS.gene010009.t1 | AT3G20010 | 26.056 | 426 | 218 | 12 | 349 | 724 | 296 | 674 | 9.75e-25 | 113 |
MS.gene010009.t1 | AT3G20010 | 26.056 | 426 | 218 | 12 | 349 | 724 | 296 | 674 | 9.75e-25 | 113 |
MS.gene010009.t1 | AT3G20010 | 26.056 | 426 | 218 | 12 | 349 | 724 | 296 | 674 | 9.75e-25 | 113 |
MS.gene010009.t1 | AT1G50410 | 29.394 | 330 | 165 | 12 | 493 | 784 | 342 | 641 | 1.21e-24 | 112 |
MS.gene010009.t1 | AT1G50410 | 33.333 | 138 | 85 | 3 | 1460 | 1594 | 817 | 950 | 1.62e-16 | 86.3 |
MS.gene010009.t1 | AT1G50410 | 29.394 | 330 | 165 | 12 | 493 | 784 | 342 | 641 | 1.21e-24 | 112 |
MS.gene010009.t1 | AT1G50410 | 33.333 | 138 | 85 | 3 | 1460 | 1594 | 817 | 950 | 1.62e-16 | 86.3 |
MS.gene010009.t1 | AT1G50410 | 29.394 | 330 | 165 | 12 | 493 | 784 | 342 | 641 | 1.21e-24 | 112 |
MS.gene010009.t1 | AT1G50410 | 33.333 | 138 | 85 | 3 | 1460 | 1594 | 817 | 950 | 1.62e-16 | 86.3 |
MS.gene010009.t1 | AT3G20010 | 23.784 | 555 | 276 | 17 | 223 | 724 | 214 | 674 | 1.33e-24 | 112 |
MS.gene010009.t1 | AT3G20010 | 35.772 | 123 | 75 | 2 | 1468 | 1590 | 894 | 1012 | 3.14e-16 | 85.5 |
MS.gene010009.t1 | AT3G20010 | 23.784 | 555 | 276 | 17 | 223 | 724 | 214 | 674 | 1.33e-24 | 112 |
MS.gene010009.t1 | AT3G20010 | 35.772 | 123 | 75 | 2 | 1468 | 1590 | 894 | 1012 | 3.14e-16 | 85.5 |
MS.gene010009.t1 | AT3G20010 | 23.784 | 555 | 276 | 17 | 223 | 724 | 214 | 674 | 1.33e-24 | 112 |
MS.gene010009.t1 | AT3G20010 | 35.772 | 123 | 75 | 2 | 1468 | 1590 | 894 | 1012 | 3.14e-16 | 85.5 |
MS.gene010009.t1 | AT5G05130 | 26.687 | 326 | 177 | 11 | 491 | 807 | 355 | 627 | 2.04e-24 | 112 |
MS.gene010009.t1 | AT5G05130 | 27.586 | 290 | 163 | 11 | 1325 | 1596 | 593 | 853 | 9.48e-20 | 96.7 |
MS.gene010009.t1 | AT1G11100 | 28.012 | 332 | 160 | 12 | 493 | 782 | 632 | 926 | 5.35e-23 | 107 |
MS.gene010009.t1 | AT1G11100 | 32.308 | 130 | 78 | 2 | 1468 | 1594 | 1117 | 1239 | 2.62e-15 | 82.8 |
MS.gene010009.t1 | AT1G11100 | 28.012 | 332 | 160 | 12 | 493 | 782 | 631 | 925 | 5.87e-23 | 107 |
MS.gene010009.t1 | AT1G11100 | 32.308 | 130 | 78 | 2 | 1468 | 1594 | 1116 | 1238 | 2.68e-15 | 82.4 |
MS.gene010009.t1 | AT1G11100 | 28.012 | 332 | 160 | 12 | 493 | 782 | 489 | 783 | 6.22e-23 | 107 |
MS.gene010009.t1 | AT1G11100 | 32.308 | 130 | 78 | 2 | 1468 | 1594 | 974 | 1096 | 3.07e-15 | 82.4 |
MS.gene010009.t1 | AT3G20010 | 28.571 | 273 | 143 | 8 | 493 | 724 | 122 | 383 | 3.24e-22 | 104 |
MS.gene010009.t1 | AT3G20010 | 34.646 | 127 | 79 | 2 | 1468 | 1594 | 603 | 725 | 2.12e-16 | 85.9 |
MS.gene010009.t1 | AT3G20010 | 28.571 | 273 | 143 | 8 | 493 | 724 | 147 | 408 | 5.41e-22 | 103 |
MS.gene010009.t1 | AT3G20010 | 34.646 | 127 | 79 | 2 | 1468 | 1594 | 628 | 750 | 2.15e-16 | 85.9 |
MS.gene010009.t1 | AT1G05120 | 28.188 | 298 | 175 | 11 | 1337 | 1621 | 560 | 831 | 6.29e-22 | 103 |
MS.gene010009.t1 | AT1G05120 | 28.188 | 298 | 175 | 11 | 1337 | 1621 | 603 | 874 | 8.90e-22 | 103 |
MS.gene010009.t1 | AT3G16600 | 26.174 | 298 | 159 | 7 | 493 | 784 | 114 | 356 | 5.35e-20 | 97.1 |
MS.gene010009.t1 | AT1G02670 | 32.768 | 177 | 112 | 4 | 1448 | 1622 | 492 | 663 | 1.29e-18 | 92.8 |
MS.gene010009.t1 | AT1G02670 | 25.610 | 328 | 164 | 9 | 492 | 788 | 150 | 428 | 6.44e-18 | 90.5 |
MS.gene010009.t1 | AT1G02670 | 32.768 | 177 | 112 | 4 | 1448 | 1622 | 519 | 690 | 1.40e-18 | 92.8 |
MS.gene010009.t1 | AT1G02670 | 25.610 | 328 | 164 | 9 | 492 | 788 | 177 | 455 | 7.60e-18 | 90.1 |
MS.gene010009.t1 | AT1G02670 | 32.768 | 177 | 112 | 4 | 1448 | 1622 | 496 | 667 | 3.02e-18 | 91.7 |
MS.gene010009.t1 | AT1G02670 | 28.481 | 158 | 87 | 4 | 492 | 647 | 177 | 310 | 2.18e-11 | 69.3 |
MS.gene010009.t1 | AT1G02670 | 32.768 | 177 | 112 | 4 | 1448 | 1622 | 507 | 678 | 3.17e-18 | 91.7 |
MS.gene010009.t1 | AT1G02670 | 28.481 | 158 | 87 | 4 | 492 | 647 | 188 | 321 | 1.93e-11 | 69.7 |
MS.gene010009.t1 | AT1G02670 | 25.610 | 328 | 164 | 9 | 492 | 788 | 177 | 455 | 4.39e-18 | 90.5 |
MS.gene010009.t1 | AT1G02670 | 25.610 | 328 | 164 | 9 | 492 | 788 | 150 | 428 | 9.64e-18 | 89.7 |
MS.gene010009.t1 | AT1G02670 | 33.884 | 121 | 76 | 2 | 1448 | 1568 | 492 | 608 | 2.27e-13 | 75.5 |
MS.gene010009.t1 | AT1G02670 | 25.610 | 328 | 164 | 9 | 492 | 788 | 177 | 455 | 1.04e-17 | 89.7 |
MS.gene010009.t1 | AT1G02670 | 33.884 | 121 | 76 | 2 | 1448 | 1568 | 519 | 635 | 2.29e-13 | 75.9 |
MS.gene010009.t1 | AT5G63950 | 27.381 | 168 | 105 | 3 | 1427 | 1589 | 695 | 850 | 4.40e-15 | 81.6 |
MS.gene010009.t1 | AT5G63950 | 27.381 | 168 | 105 | 3 | 1427 | 1589 | 712 | 867 | 4.95e-15 | 81.6 |
MS.gene010009.t1 | AT2G28290 | 30.531 | 226 | 137 | 7 | 1449 | 1664 | 1074 | 1289 | 1.31e-14 | 80.5 |
MS.gene010009.t1 | AT2G28290 | 30.531 | 226 | 137 | 7 | 1449 | 1664 | 1075 | 1290 | 1.31e-14 | 80.5 |
MS.gene010009.t1 | AT2G28290 | 30.531 | 226 | 137 | 7 | 1449 | 1664 | 1074 | 1289 | 1.32e-14 | 80.5 |
MS.gene010009.t1 | AT2G28290 | 30.531 | 226 | 137 | 7 | 1449 | 1664 | 1074 | 1289 | 1.32e-14 | 80.5 |
MS.gene010009.t1 | AT2G28290 | 30.531 | 226 | 137 | 7 | 1449 | 1664 | 1075 | 1290 | 1.32e-14 | 80.5 |
MS.gene010009.t1 | AT2G28290 | 30.531 | 226 | 137 | 7 | 1449 | 1664 | 1074 | 1289 | 1.44e-14 | 80.5 |
MS.gene010009.t1 | AT2G02090 | 33.333 | 135 | 84 | 2 | 1460 | 1594 | 600 | 728 | 2.88e-14 | 79.0 |
MS.gene010009.t1 | AT2G18760 | 27.570 | 214 | 144 | 6 | 1409 | 1621 | 749 | 952 | 5.82e-14 | 78.2 |
MS.gene010009.t1 | AT2G18760 | 27.570 | 214 | 144 | 6 | 1409 | 1621 | 690 | 893 | 6.95e-14 | 77.8 |
MS.gene010009.t1 | AT2G18760 | 27.570 | 214 | 144 | 6 | 1409 | 1621 | 690 | 893 | 6.95e-14 | 77.8 |
MS.gene010009.t1 | AT2G18760 | 27.570 | 214 | 144 | 6 | 1409 | 1621 | 690 | 893 | 6.95e-14 | 77.8 |
MS.gene010009.t1 | AT2G18760 | 27.570 | 214 | 144 | 6 | 1409 | 1621 | 690 | 893 | 6.95e-14 | 77.8 |
MS.gene010009.t1 | AT2G18760 | 27.570 | 214 | 144 | 6 | 1409 | 1621 | 690 | 893 | 6.95e-14 | 77.8 |
MS.gene010009.t1 | AT2G18760 | 27.570 | 214 | 144 | 6 | 1409 | 1621 | 690 | 893 | 6.95e-14 | 77.8 |
MS.gene010009.t1 | AT4G31900 | 28.916 | 166 | 105 | 5 | 1449 | 1609 | 525 | 682 | 2.72e-13 | 75.9 |
MS.gene010009.t1 | AT4G31900 | 28.916 | 166 | 105 | 5 | 1449 | 1609 | 484 | 641 | 2.98e-13 | 75.9 |
MS.gene010009.t1 | AT4G31900 | 28.916 | 166 | 105 | 5 | 1449 | 1609 | 525 | 682 | 3.09e-13 | 75.9 |
MS.gene010009.t1 | AT3G57300 | 25.817 | 306 | 158 | 13 | 494 | 784 | 636 | 887 | 1.58e-12 | 73.6 |
MS.gene010009.t1 | AT3G57300 | 29.448 | 163 | 108 | 3 | 1460 | 1621 | 1218 | 1374 | 1.23e-11 | 70.5 |
MS.gene010009.t1 | AT3G57300 | 25.817 | 306 | 158 | 13 | 494 | 784 | 636 | 887 | 1.58e-12 | 73.6 |
MS.gene010009.t1 | AT3G57300 | 29.448 | 163 | 108 | 3 | 1460 | 1621 | 1218 | 1374 | 1.23e-11 | 70.5 |
MS.gene010009.t1 | AT3G57300 | 25.817 | 306 | 158 | 13 | 494 | 784 | 636 | 887 | 1.71e-12 | 73.6 |
MS.gene010009.t1 | AT2G25170 | 28.161 | 174 | 111 | 6 | 1449 | 1617 | 596 | 760 | 3.47e-12 | 72.4 |
MS.gene010009.t1 | AT2G25170 | 28.161 | 174 | 111 | 6 | 1449 | 1617 | 596 | 760 | 3.47e-12 | 72.4 |
MS.gene010009.t1 | AT2G25170 | 28.161 | 174 | 111 | 6 | 1449 | 1617 | 613 | 777 | 4.12e-12 | 72.0 |
MS.gene010009.t1 | AT2G25170 | 28.161 | 174 | 111 | 6 | 1449 | 1617 | 622 | 786 | 4.17e-12 | 72.0 |
MS.gene010009.t1 | AT3G19210 | 30.769 | 143 | 94 | 2 | 1453 | 1594 | 538 | 676 | 6.49e-12 | 71.2 |
MS.gene010009.t1 | AT2G44980 | 27.551 | 196 | 133 | 4 | 1468 | 1661 | 386 | 574 | 7.67e-12 | 70.9 |
MS.gene010009.t1 | AT3G19210 | 30.769 | 143 | 94 | 2 | 1453 | 1594 | 536 | 674 | 8.41e-12 | 70.9 |
MS.gene010009.t1 | AT3G19210 | 30.769 | 143 | 94 | 2 | 1453 | 1594 | 538 | 676 | 8.71e-12 | 70.9 |
MS.gene010009.t1 | AT3G57300 | 29.448 | 163 | 108 | 3 | 1460 | 1621 | 1251 | 1407 | 1.11e-11 | 70.9 |
MS.gene010009.t1 | AT3G54460 | 31.707 | 123 | 79 | 2 | 1468 | 1590 | 898 | 1015 | 1.78e-11 | 70.1 |
MS.gene010009.t1 | AT5G66750 | 28.800 | 125 | 86 | 1 | 1465 | 1589 | 539 | 660 | 2.12e-11 | 69.3 |
MS.gene010009.t1 | AT3G54460 | 31.707 | 123 | 79 | 2 | 1468 | 1590 | 1195 | 1312 | 2.42e-11 | 69.7 |
MS.gene010009.t1 | AT3G54280 | 28.125 | 160 | 108 | 3 | 1468 | 1624 | 1832 | 1987 | 4.94e-11 | 68.9 |
MS.gene010009.t1 | AT3G54280 | 28.125 | 160 | 108 | 3 | 1468 | 1624 | 1863 | 2018 | 5.32e-11 | 68.6 |
Find 340 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATATCTGAAGTCATTATTTC+TGG | 0.150465 | 5.3:+54243042 | None:intergenic |
CGCTCAATATCTTCATCTTT+TGG | 0.158727 | 5.3:+54234621 | None:intergenic |
ACTTCGTCACCTTATGTATT+TGG | 0.178005 | 5.3:-54242161 | MS.gene010009:CDS |
CTATCTTGGTCTTGCTTATA+AGG | 0.190614 | 5.3:+54236676 | None:intergenic |
ATATTTCTGAAGTTGTTCTT+AGG | 0.207621 | 5.3:-54243512 | MS.gene010009:CDS |
GGAAAAGAAAATAATGATTT+TGG | 0.216645 | 5.3:-54243600 | MS.gene010009:CDS |
TCCAAAGGAAAACAATTATC+TGG | 0.225747 | 5.3:-54236426 | MS.gene010009:CDS |
GGACCTGATGAAAGTGTTTC+TGG | 0.231585 | 5.3:-54243258 | MS.gene010009:CDS |
CCCAATTCTCATTAAGATTT+CGG | 0.237239 | 5.3:-54243428 | MS.gene010009:CDS |
ATGACTTCAGATATTAAGTA+TGG | 0.248020 | 5.3:-54243033 | MS.gene010009:CDS |
TCATCAAACTTTCGCTGAAT+TGG | 0.248477 | 5.3:+54238539 | None:intergenic |
AGGTTTGTATTTGTATTATT+AGG | 0.264508 | 5.3:+54228109 | None:intergenic |
CGAAAGTTTGATGACTTATA+TGG | 0.265767 | 5.3:-54238530 | MS.gene010009:CDS |
GCCTTGTTGTCACAGATAAA+AGG | 0.270900 | 5.3:-54233187 | MS.gene010009:CDS |
TCTATCCTGGAGGTTCTTCT+TGG | 0.271217 | 5.3:-54233773 | MS.gene010009:CDS |
GTACAAATCAAACTACATTT+TGG | 0.272666 | 5.3:-54234943 | MS.gene010009:CDS |
AGCCAATGGCCTCAATCTTT+TGG | 0.273293 | 5.3:-54229007 | MS.gene010009:CDS |
TGAGCTAGATGAATTGTTTC+AGG | 0.275445 | 5.3:-54234541 | MS.gene010009:intron |
TCAATTTCCGGCGCAGTTCT+TGG | 0.276076 | 5.3:+54228139 | None:intergenic |
AGATTTCGGTTGTGCAATAT+TGG | 0.277233 | 5.3:-54243414 | MS.gene010009:CDS |
ACCGAAATCTTAATGAGAAT+TGG | 0.278203 | 5.3:+54243427 | None:intergenic |
AACTATTGCAAGACTCGATT+TGG | 0.279106 | 5.3:-54233740 | MS.gene010009:CDS |
CATCAAACTTTCGCTGAATT+GGG | 0.294506 | 5.3:+54238540 | None:intergenic |
CAGAAAATGGATTAAATGAT+AGG | 0.294703 | 5.3:-54236260 | MS.gene010009:CDS |
TCATGCCACTGGGGCAAAAT+AGG | 0.295882 | 5.3:+54239998 | None:intergenic |
GATAAATCTCTTGATGCTTT+AGG | 0.298707 | 5.3:-54233268 | MS.gene010009:CDS |
CCGAAATCTTAATGAGAATT+GGG | 0.300169 | 5.3:+54243428 | None:intergenic |
GCATCTAGTAGTTCAGAAAA+TGG | 0.301576 | 5.3:-54236273 | MS.gene010009:CDS |
TGTGGTGACATAAGTTTAAC+TGG | 0.302814 | 5.3:-54236321 | MS.gene010009:CDS |
GTAAGAAGAGTTGGGATAAC+TGG | 0.305160 | 5.3:+54238686 | None:intergenic |
CCCCAGGTTGGAAGTAGTTC+TGG | 0.305430 | 5.3:-54236838 | MS.gene010009:CDS |
GTTCTTAGGGATTTAAATAT+AGG | 0.306802 | 5.3:-54243498 | MS.gene010009:CDS |
AAGCATCGTTGGTGCATTAC+AGG | 0.308019 | 5.3:-54238566 | MS.gene010009:CDS |
ATTGCTTGTGCTTCAGCAGC+TGG | 0.314113 | 5.3:+54228946 | None:intergenic |
AGGAAAGTTACGCTACTTAA+AGG | 0.317818 | 5.3:-54233167 | MS.gene010009:intron |
GTCTCAAATATGAAGGACTA+TGG | 0.319685 | 5.3:-54240240 | MS.gene010009:CDS |
CTACTAGATGCAACATTTGA+TGG | 0.320383 | 5.3:+54236285 | None:intergenic |
ACTGAATCTCCTATTGCTTC+TGG | 0.321966 | 5.3:-54240046 | MS.gene010009:CDS |
GCCTCCGCTTGAGTGATTAA+TGG | 0.326934 | 5.3:+54236910 | None:intergenic |
AACTTACTTTGAAGGCTTGA+TGG | 0.328893 | 5.3:+54242903 | None:intergenic |
ATTTGTCTATGCAAGGTCTT+TGG | 0.333858 | 5.3:-54233374 | MS.gene010009:CDS |
ATAATGAAGAATCCAGAAAA+AGG | 0.334602 | 5.3:-54234270 | MS.gene010009:CDS |
AGCTTCCTCACCTTCTATCT+TGG | 0.336622 | 5.3:+54236662 | None:intergenic |
ACCAATCATTTATTCATTAG+TGG | 0.338450 | 5.3:-54228229 | MS.gene010009:CDS |
AAAGCTGCACGCCGTTGATA+TGG | 0.338475 | 5.3:+54242485 | None:intergenic |
GTATGGGTTTAGTAGCTATA+TGG | 0.340059 | 5.3:-54243016 | MS.gene010009:CDS |
TCAAACTTTCAATAACTTCA+TGG | 0.340569 | 5.3:+54237081 | None:intergenic |
CGGTCAACCTCAACAAAATA+AGG | 0.345778 | 5.3:+54243564 | None:intergenic |
TCTAGATGAATATCAGTATA+AGG | 0.345786 | 5.3:+54243348 | None:intergenic |
AATTCTTGGGATTAGGCTTT+CGG | 0.348602 | 5.3:-54243193 | MS.gene010009:CDS |
TGTATGCAGCATTGACGAAT+TGG | 0.349845 | 5.3:+54231373 | None:intergenic |
ACAACATGTTGCAGATGAAT+TGG | 0.349991 | 5.3:-54237201 | MS.gene010009:CDS |
CGGAGGACATTCCTTCCCTT+AGG | 0.356885 | 5.3:-54243173 | MS.gene010009:CDS |
CGTTGATATGGCCTCAGTTC+AGG | 0.357500 | 5.3:+54242497 | None:intergenic |
GAAAGCTTAACTTACTTTGA+AGG | 0.360202 | 5.3:+54242895 | None:intergenic |
TGTTTCTGGTCTTGTTCATT+TGG | 0.367917 | 5.3:-54243244 | MS.gene010009:CDS |
GTATTTGGAGGCATTCTTGC+TGG | 0.371250 | 5.3:-54242146 | MS.gene010009:intron |
ATTGTATGAGGATATTTATC+AGG | 0.375390 | 5.3:-54243454 | MS.gene010009:CDS |
GATATCCATCAGACATGAAT+TGG | 0.377188 | 5.3:+54239253 | None:intergenic |
TGCTCTCATCTTTGCTCACC+GGG | 0.382977 | 5.3:-54240386 | MS.gene010009:CDS |
CATGGAGGGCCATCACAATT+AGG | 0.383319 | 5.3:+54234573 | None:intergenic |
AAGACGAATCTTGTGGATAA+AGG | 0.383988 | 5.3:-54229673 | MS.gene010009:CDS |
AAATCCACCGGCACACATAA+TGG | 0.386291 | 5.3:+54242392 | None:intergenic |
TGCAATATTGGCAATGATCT+TGG | 0.388233 | 5.3:-54243402 | MS.gene010009:CDS |
ACATGCACGGTGTTATTATC+AGG | 0.389376 | 5.3:-54243291 | MS.gene010009:CDS |
GTGATGGTGGCAGGTCTCTC+AGG | 0.393061 | 5.3:+54228089 | None:intergenic |
TTCCCTTAGGGTGAGGGTTG+AGG | 0.393152 | 5.3:-54243160 | MS.gene010009:CDS |
GCAGATGACGGTGGCTATGC+AGG | 0.399782 | 5.3:-54242964 | MS.gene010009:CDS |
CCCAAGAGGAGTGCCTCTCT+TGG | 0.407624 | 5.3:-54237169 | MS.gene010009:CDS |
GTTACATTGAGGGCAATTCT+TGG | 0.408048 | 5.3:-54243207 | MS.gene010009:CDS |
CGGTTTCTCGTTTACACCTA+AGG | 0.408121 | 5.3:-54233303 | MS.gene010009:CDS |
GAATGATGTACTTGATGTAT+TGG | 0.408325 | 5.3:-54229610 | MS.gene010009:CDS |
TGAGGGCAATTCTTGGGATT+AGG | 0.408757 | 5.3:-54243200 | MS.gene010009:CDS |
GCCAAGAGAGGCACTCCTCT+TGG | 0.410093 | 5.3:+54237168 | None:intergenic |
TAATAACACCGTGCATGTTT+CGG | 0.410236 | 5.3:+54243296 | None:intergenic |
TTGTCATAGGTGACTGCTGC+AGG | 0.411199 | 5.3:+54236806 | None:intergenic |
ATTACTGTTGAAGGCTCATA+TGG | 0.411304 | 5.3:-54231320 | MS.gene010009:CDS |
TATATTGAAAGGACTGGATT+TGG | 0.411857 | 5.3:+54238493 | None:intergenic |
AAAAGACTGTGAATCTATTC+AGG | 0.414421 | 5.3:-54229055 | MS.gene010009:CDS |
ATACTGGTGGAGGATTTGTT+TGG | 0.415870 | 5.3:-54238657 | MS.gene010009:CDS |
TTCAAGATCGGCATCTATCC+TGG | 0.415976 | 5.3:-54233786 | MS.gene010009:CDS |
TTAAGATAAAATACCTCATA+AGG | 0.417530 | 5.3:+54238440 | None:intergenic |
TGCTTTGCTAAAGCTTCGCC+AGG | 0.419678 | 5.3:-54236872 | MS.gene010009:CDS |
TGAGTGCATGAAGAGTTATC+TGG | 0.432213 | 5.3:+54232283 | None:intergenic |
TGTGTTGGTTATTCAGCTAA+AGG | 0.432917 | 5.3:-54240178 | MS.gene010009:CDS |
GGCTACTAGCTGATCTAATC+CGG | 0.437833 | 5.3:+54234698 | None:intergenic |
AGTGGCATGACGAAATTATA+CGG | 0.438759 | 5.3:-54239985 | MS.gene010009:intron |
TATTTCTGAAGTTGTTCTTA+GGG | 0.438922 | 5.3:-54243511 | MS.gene010009:CDS |
GCCACTAATGAATAAATGAT+TGG | 0.439005 | 5.3:+54228228 | None:intergenic |
TTGCTCTCATCTTTGCTCAC+CGG | 0.439440 | 5.3:-54240387 | MS.gene010009:CDS |
TTTCAGATATTTGACAGAAC+TGG | 0.439804 | 5.3:+54236218 | None:intergenic |
TTTGTTGAGGTTGACCGGTC+TGG | 0.440014 | 5.3:-54243558 | MS.gene010009:CDS |
TATGAAATTTGTTACATTGA+GGG | 0.440642 | 5.3:-54243217 | MS.gene010009:CDS |
AATTCATGTCTGATGGATAT+CGG | 0.441234 | 5.3:-54239251 | MS.gene010009:CDS |
CATGATTCTGATAGACATAT+AGG | 0.442069 | 5.3:-54239167 | MS.gene010009:CDS |
AAAAGCTACGGAAGAAAGTC+AGG | 0.444657 | 5.3:-54242444 | MS.gene010009:CDS |
TTATGGATTTGAATTGTATG+AGG | 0.444946 | 5.3:-54243466 | MS.gene010009:CDS |
ATCAACGGCGTGCAGCTTTG+TGG | 0.446900 | 5.3:-54242481 | MS.gene010009:CDS |
CCAAGAGAGGCACTCCTCTT+GGG | 0.447016 | 5.3:+54237169 | None:intergenic |
AAAGGATGTGGAATCCTTGT+TGG | 0.448852 | 5.3:-54228170 | MS.gene010009:CDS |
AACATAGCAAGACTATTACT+TGG | 0.449048 | 5.3:-54231472 | MS.gene010009:CDS |
ACTGCCATCAGTCAATTTAG+AGG | 0.451273 | 5.3:-54229093 | MS.gene010009:CDS |
TTACATTGAGGGCAATTCTT+GGG | 0.451756 | 5.3:-54243206 | MS.gene010009:CDS |
CTCTTCTTACCAGAGTATAC+TGG | 0.451983 | 5.3:-54238673 | MS.gene010009:CDS |
TTGTTTGGATGAGGCTCAAA+TGG | 0.452966 | 5.3:-54238642 | MS.gene010009:CDS |
GATCTTGGTCGATGCAAACT+TGG | 0.453725 | 5.3:-54243387 | MS.gene010009:CDS |
CCAGTGACATAAACTTCTCC+TGG | 0.454355 | 5.3:+54233209 | None:intergenic |
GGAGGACATTCCTTCCCTTA+GGG | 0.454544 | 5.3:-54243172 | MS.gene010009:CDS |
AATAAACATGCCGTAGGAGC+TGG | 0.455195 | 5.3:-54243624 | MS.gene010009:CDS |
GTATGCAGCATTGACGAATT+GGG | 0.455309 | 5.3:+54231374 | None:intergenic |
CACTGGGGCAAAATAGGAGC+TGG | 0.455569 | 5.3:+54240004 | None:intergenic |
TGGTAAAAGTGCTCTTCTAC+TGG | 0.456218 | 5.3:+54237134 | None:intergenic |
AAGATTGAAGAATGCATCTC+AGG | 0.459510 | 5.3:-54234860 | MS.gene010009:CDS |
CATTCCTTCCCTTAGGGTGA+GGG | 0.459546 | 5.3:-54243166 | MS.gene010009:CDS |
ACATTCCTTCCCTTAGGGTG+AGG | 0.459624 | 5.3:-54243167 | MS.gene010009:CDS |
TTGAGGCTTCTAGAAAACCT+TGG | 0.460903 | 5.3:-54243101 | MS.gene010009:CDS |
ACTGAAATCAAAACGAGGAT+TGG | 0.466286 | 5.3:-54240149 | MS.gene010009:CDS |
AGTACTTCCTCCATTGTCAT+AGG | 0.466339 | 5.3:+54236793 | None:intergenic |
TGCTACCGCTGCTACTGAAA+TGG | 0.467352 | 5.3:-54238606 | MS.gene010009:CDS |
CTCAAGAATATGTAAATGCT+TGG | 0.467900 | 5.3:+54233694 | None:intergenic |
TTAATCACTCAAGCGGAGGC+AGG | 0.468366 | 5.3:-54236907 | MS.gene010009:CDS |
CACAAGCTGCATGTTGCCTC+TGG | 0.468948 | 5.3:+54237114 | None:intergenic |
ATAAGCAAGACCAAGATAGA+AGG | 0.469263 | 5.3:-54236672 | MS.gene010009:CDS |
GTTTAGTAGCTATATGGAAA+TGG | 0.471798 | 5.3:-54243010 | MS.gene010009:CDS |
ACATCCTTTAGAGTCAAAAC+AGG | 0.472284 | 5.3:+54228184 | None:intergenic |
GTATAATTTCGTCATGCCAC+TGG | 0.472323 | 5.3:+54239987 | None:intergenic |
CATCACCTTCGTCCGGATGA+AGG | 0.475084 | 5.3:-54229565 | MS.gene010009:CDS |
GTAACAGATGAGATGGGATT+GGG | 0.475157 | 5.3:-54240427 | MS.gene010009:intron |
TGTAACAGATGAGATGGGAT+TGG | 0.477612 | 5.3:-54240428 | MS.gene010009:intron |
TCAGTATGCTGTCGACATGT+AGG | 0.477899 | 5.3:+54231440 | None:intergenic |
CAAACTTTCAATAACTTCAT+GGG | 0.482527 | 5.3:+54237082 | None:intergenic |
TATAATTTCGTCATGCCACT+GGG | 0.482982 | 5.3:+54239988 | None:intergenic |
AAATGTAGTTTGATTTGTAC+TGG | 0.484450 | 5.3:+54234946 | None:intergenic |
CTATATGTCTATCAGAATCA+TGG | 0.485844 | 5.3:+54239168 | None:intergenic |
TTTCAATGTAACAGATGAGA+TGG | 0.486557 | 5.3:-54240434 | MS.gene010009:intron |
GAAGCATCCATTACTGTTGA+AGG | 0.487642 | 5.3:-54231329 | MS.gene010009:CDS |
ACTCATACCTAAAACTTATG+AGG | 0.487919 | 5.3:-54232218 | MS.gene010009:CDS |
TATACTCTGGTAAGAAGAGT+TGG | 0.487999 | 5.3:+54238677 | None:intergenic |
GTGGAGGATTTGTTTGGATG+AGG | 0.488874 | 5.3:-54238651 | MS.gene010009:CDS |
TCGTCACCTTATGTATTTGG+AGG | 0.489251 | 5.3:-54242158 | MS.gene010009:CDS |
TTTCTCCAATTCATGTCTGA+TGG | 0.489319 | 5.3:-54239258 | MS.gene010009:CDS |
CCAGGAGAAGTTTATGTCAC+TGG | 0.490857 | 5.3:-54233209 | MS.gene010009:CDS |
ATGCTCATTATGTCTTCTCT+CGG | 0.491082 | 5.3:+54228048 | None:intergenic |
GACGAAGGTGATGTTATTAG+TGG | 0.491914 | 5.3:+54229575 | None:intergenic |
CTGGTGAAAACGTACCTGAA+TGG | 0.492334 | 5.3:+54242338 | None:intergenic |
TAGAAGGTGAGGAAGCTCTC+AGG | 0.493930 | 5.3:-54236656 | MS.gene010009:CDS |
TGTTCGAGGTTCGATCCTGC+TGG | 0.496229 | 5.3:-54242937 | MS.gene010009:CDS |
CTATGCTGTTGATGCACAAA+AGG | 0.496469 | 5.3:-54231402 | MS.gene010009:CDS |
ACATAAGGTGACGAAGTCTC+TGG | 0.497538 | 5.3:+54242167 | None:intergenic |
TGGTGAAAACGTACCTGAAT+GGG | 0.498890 | 5.3:+54242339 | None:intergenic |
TCTTGGTGCTCTTGCCAACA+AGG | 0.499084 | 5.3:+54228156 | None:intergenic |
GTCAAACTCTACGGAAGAGA+AGG | 0.499125 | 5.3:-54232245 | MS.gene010009:CDS |
GTCGATGCAAACTTGGCCAT+TGG | 0.499470 | 5.3:-54243380 | MS.gene010009:CDS |
CCAGATTCTGTCTCTTCGAG+TGG | 0.500153 | 5.3:-54236943 | MS.gene010009:intron |
GCAGCAGTCACCTATGACAA+TGG | 0.500860 | 5.3:-54236803 | MS.gene010009:CDS |
TATACCTGCCTCCCTTCATC+CGG | 0.501191 | 5.3:+54229553 | None:intergenic |
ATCACCTTCGTCCGGATGAA+GGG | 0.503746 | 5.3:-54229564 | MS.gene010009:CDS |
AAAAGTAAACCTCATCGATC+AGG | 0.504080 | 5.3:-54243690 | MS.gene010009:CDS |
TTACTAAGAAACGGTGAATG+AGG | 0.504997 | 5.3:+54228887 | None:intergenic |
GACTCCATTGCAAGCATCGT+TGG | 0.505303 | 5.3:-54238577 | MS.gene010009:CDS |
CTCAGTTCAGGAAGTAACTC+TGG | 0.506825 | 5.3:+54242509 | None:intergenic |
CTGACGTATGAAATTCAAAC+CGG | 0.506999 | 5.3:-54234717 | MS.gene010009:CDS |
AGTGCGACATTTGTGATGCT+TGG | 0.508817 | 5.3:-54240213 | MS.gene010009:CDS |
GGTTTCTCGTTTACACCTAA+GGG | 0.512025 | 5.3:-54233302 | MS.gene010009:CDS |
TCTGTATATATTGAAAGGAC+TGG | 0.516616 | 5.3:+54238487 | None:intergenic |
AGAATGCCTCCAAATACATA+AGG | 0.517395 | 5.3:+54242152 | None:intergenic |
GCTATTGCCGCTGCAAGTGA+TGG | 0.517582 | 5.3:+54228073 | None:intergenic |
GTACCTCAACCCTCACCCTA+AGG | 0.518395 | 5.3:+54243157 | None:intergenic |
GCATTCTGAAGATTTCCGTC+TGG | 0.518593 | 5.3:-54236529 | MS.gene010009:CDS |
GAACAACTTCAGAAATATCA+AGG | 0.519136 | 5.3:+54243517 | None:intergenic |
CGCTTGAGTGATTAATGGAT+CGG | 0.520931 | 5.3:+54236915 | None:intergenic |
ATCCAGAACTACTTCCAACC+TGG | 0.521008 | 5.3:+54236836 | None:intergenic |
GATAGATACTTACTAAGAAA+CGG | 0.522639 | 5.3:+54228878 | None:intergenic |
ATACTCTGGTAAGAAGAGTT+GGG | 0.523512 | 5.3:+54238678 | None:intergenic |
GGTATGTCATCTTCAAGCAT+TGG | 0.524204 | 5.3:+54242530 | None:intergenic |
CCAAAGGAAAACAATTATCT+GGG | 0.524274 | 5.3:-54236425 | MS.gene010009:CDS |
GTTTCAAAGTTCTTACATGC+AGG | 0.524373 | 5.3:-54236124 | MS.gene010009:intron |
CACTTTCAGATGCTGATCCC+CGG | 0.525149 | 5.3:+54240368 | None:intergenic |
AGGGATTTAAATATAGGAGA+AGG | 0.527462 | 5.3:-54243492 | MS.gene010009:CDS |
TTAATCCAACATGGAGCCAA+TGG | 0.529280 | 5.3:-54229021 | MS.gene010009:CDS |
TCATTCTCCATTATGTGTGC+CGG | 0.529644 | 5.3:-54242399 | MS.gene010009:CDS |
AGACCAGAAACACTTTCATC+AGG | 0.532173 | 5.3:+54243255 | None:intergenic |
AGCGAAAGTCTCAAATATGA+AGG | 0.532815 | 5.3:-54240247 | MS.gene010009:CDS |
ATATGAGCCTTCAACAGTAA+TGG | 0.533337 | 5.3:+54231322 | None:intergenic |
AGAAAATGGATTAAATGATA+GGG | 0.533338 | 5.3:-54236259 | MS.gene010009:CDS |
AGAGTGGCACCAGAAGCAAT+AGG | 0.533649 | 5.3:+54240037 | None:intergenic |
GTATGAAATTTGTTACATTG+AGG | 0.534815 | 5.3:-54243218 | MS.gene010009:CDS |
TAGGGAATCTGATGATTTGT+CGG | 0.535874 | 5.3:-54236241 | MS.gene010009:CDS |
CAGTATGCTGTCGACATGTA+GGG | 0.538726 | 5.3:+54231441 | None:intergenic |
TTCCAAAAGATTGAGGCCAT+TGG | 0.538761 | 5.3:+54229005 | None:intergenic |
CCGCTGCAAGTGATGGTGGC+AGG | 0.539321 | 5.3:+54228080 | None:intergenic |
TTCCCCACTCGTCACAGCTA+TGG | 0.541658 | 5.3:+54240105 | None:intergenic |
ACATAGCAAGACTATTACTT+GGG | 0.542447 | 5.3:-54231471 | MS.gene010009:CDS |
TTACCAGAGTATACTGGTGG+AGG | 0.544020 | 5.3:-54238667 | MS.gene010009:CDS |
AAGAGCACCAAGAACTGCGC+CGG | 0.544610 | 5.3:-54228146 | MS.gene010009:CDS |
CTAATAACATCACCTTCGTC+CGG | 0.545285 | 5.3:-54229572 | MS.gene010009:CDS |
TAACTCCAAGAAGAACCTCC+AGG | 0.546173 | 5.3:+54233768 | None:intergenic |
AGAGTTTGTTAAAAGAGCTA+CGG | 0.547423 | 5.3:-54243328 | MS.gene010009:CDS |
TCACCACGCTGAGAAGGATA+AGG | 0.548828 | 5.3:-54234906 | MS.gene010009:CDS |
AGAAATATCAAGGTGTTCAT+CGG | 0.549099 | 5.3:+54243527 | None:intergenic |
AGTAAACCTCATCGATCAGG+TGG | 0.549601 | 5.3:-54243687 | MS.gene010009:CDS |
ATTCTTAATAGAAAAGTCCC+AGG | 0.550308 | 5.3:-54237050 | MS.gene010009:intron |
GATGAAGATATTGAGCGCGT+TGG | 0.550908 | 5.3:-54234615 | MS.gene010009:CDS |
ATCTATTTAGACTTCAAGAT+CGG | 0.551022 | 5.3:-54233798 | MS.gene010009:intron |
TCTCAAATATGAAGGACTAT+GGG | 0.552629 | 5.3:-54240239 | MS.gene010009:CDS |
CGAAATCTTAATGAGAATTG+GGG | 0.552977 | 5.3:+54243429 | None:intergenic |
AAGTGACTCGCATGCATCGA+AGG | 0.554739 | 5.3:+54243125 | None:intergenic |
GCTTTGAACTTGCCATCCAA+AGG | 0.556090 | 5.3:-54236441 | MS.gene010009:CDS |
TGCATGCGAGTCACTTCTTG+AGG | 0.556294 | 5.3:-54243118 | MS.gene010009:CDS |
TGAGGCCATTGGCTCCATGT+TGG | 0.556338 | 5.3:+54229016 | None:intergenic |
CACCATCTGTATATATTGAA+AGG | 0.556938 | 5.3:+54238482 | None:intergenic |
TTCTCCATTATGTGTGCCGG+TGG | 0.558640 | 5.3:-54242396 | MS.gene010009:CDS |
AAAGCTAGGCCATCAGAGAA+TGG | 0.558959 | 5.3:-54232173 | MS.gene010009:CDS |
ATCAGCCGTGTACATCGAAT+CGG | 0.559189 | 5.3:-54228925 | MS.gene010009:CDS |
GAAGGGAGATATGGGAGCTA+CGG | 0.559487 | 5.3:-54237270 | MS.gene010009:CDS |
TATAATTTCATCTGCTGAGG+AGG | 0.560453 | 5.3:-54234383 | MS.gene010009:CDS |
CAAGCATTTACATATTCTTG+AGG | 0.562099 | 5.3:-54233693 | MS.gene010009:intron |
AAATGCTATGTCAAACTCTA+CGG | 0.563543 | 5.3:-54232254 | MS.gene010009:CDS |
TGACTTCAGATATTAAGTAT+GGG | 0.563864 | 5.3:-54243032 | MS.gene010009:CDS |
TAATCACTCAAGCGGAGGCA+GGG | 0.565566 | 5.3:-54236906 | MS.gene010009:CDS |
CACTGCAGTCATACACGCCC+AGG | 0.565725 | 5.3:-54239323 | MS.gene010009:intron |
TAGAGCCATTTCAGTAGCAG+CGG | 0.566170 | 5.3:+54238601 | None:intergenic |
ATCACTTGCAGCGGCAATAG+CGG | 0.566423 | 5.3:-54228071 | MS.gene010009:CDS |
TTCAAAAGAAAAGTTTCGCA+CGG | 0.566440 | 5.3:-54234351 | MS.gene010009:CDS |
ATCAAACTTTCGCTGAATTG+GGG | 0.568899 | 5.3:+54238541 | None:intergenic |
ATTTGTGATGCTTGGCAACA+TGG | 0.570319 | 5.3:-54240205 | MS.gene010009:CDS |
AGAGAGGCACTCCTCTTGGG+AGG | 0.570570 | 5.3:+54237172 | None:intergenic |
CCCACTCGTCACAGCTATGG+TGG | 0.570647 | 5.3:+54240108 | None:intergenic |
GAGCGTGTGGAGTGCATATG+TGG | 0.570869 | 5.3:-54240277 | MS.gene010009:CDS |
CCAATTTGTCAAGAAAAGCT+AGG | 0.571826 | 5.3:-54232187 | MS.gene010009:CDS |
TCGTCCGGATGAAGGGAGGC+AGG | 0.573070 | 5.3:-54229557 | MS.gene010009:intron |
GGTGATGTTATTAGTGGCAA+AGG | 0.573193 | 5.3:+54229581 | None:intergenic |
TCCAGAACTACTTCCAACCT+GGG | 0.575953 | 5.3:+54236837 | None:intergenic |
ACTGGGGCAAAATAGGAGCT+GGG | 0.576187 | 5.3:+54240005 | None:intergenic |
TACTAAGAAACGGTGAATGA+GGG | 0.578198 | 5.3:+54228888 | None:intergenic |
AGTTGATTTGCAGACAGACA+TGG | 0.578769 | 5.3:-54242986 | MS.gene010009:CDS |
GTCCTTTCAATATATACAGA+TGG | 0.579070 | 5.3:-54238484 | MS.gene010009:CDS |
TGCACCAACGATGCTTGCAA+TGG | 0.579375 | 5.3:+54238573 | None:intergenic |
CAAGACCAAGATAGAAGGTG+AGG | 0.579514 | 5.3:-54236667 | MS.gene010009:CDS |
TCAGCAGCTGGATTGAGTAA+TGG | 0.580331 | 5.3:+54228958 | None:intergenic |
GATTCAGTGCCCCAAGTCAA+CGG | 0.580750 | 5.3:-54240334 | MS.gene010009:CDS |
TTGAGGTTGACCGGTCTGGT+TGG | 0.583431 | 5.3:-54243554 | MS.gene010009:CDS |
TGCTCATGATGAAATAAAGA+TGG | 0.586589 | 5.3:-54233326 | MS.gene010009:CDS |
CAATTTAGAGGAATACAGAA+TGG | 0.587353 | 5.3:-54229081 | MS.gene010009:CDS |
GAATGTTGGGCAGAAAGTTG+TGG | 0.588246 | 5.3:-54234248 | MS.gene010009:intron |
AGCATCGTTGGTGCATTACA+GGG | 0.588504 | 5.3:-54238565 | MS.gene010009:CDS |
GCTAGTAGCCTCAAGGAAAG+TGG | 0.588796 | 5.3:-54234685 | MS.gene010009:CDS |
AATCGTCGAGATTAGCTGCT+CGG | 0.589433 | 5.3:-54234829 | MS.gene010009:intron |
TAAGAAGAGTTGGGATAACT+GGG | 0.589439 | 5.3:+54238687 | None:intergenic |
AATTGTCAACCTAATTGTGA+TGG | 0.589620 | 5.3:-54234582 | MS.gene010009:CDS |
GAGTTATCTGGACTTTCCGA+TGG | 0.589972 | 5.3:+54232295 | None:intergenic |
AGCACTTCACCACGCTGAGA+AGG | 0.591423 | 5.3:-54234912 | MS.gene010009:CDS |
ATTGAAACACCATTCTCTGA+TGG | 0.592513 | 5.3:+54232164 | None:intergenic |
TCAAACTCTACGGAAGAGAA+GGG | 0.593397 | 5.3:-54232244 | MS.gene010009:CDS |
TTCAATGTAACAGATGAGAT+GGG | 0.593691 | 5.3:-54240433 | MS.gene010009:intron |
TAAATGCTTGGTCGCTGCTG+AGG | 0.594626 | 5.3:+54233706 | None:intergenic |
AGTTAATACAATGTCCGCAC+TGG | 0.596456 | 5.3:+54239220 | None:intergenic |
TACCTCAACCCTCACCCTAA+GGG | 0.596468 | 5.3:+54243158 | None:intergenic |
AGAGAATGGTGTTTCAATGT+GGG | 0.596936 | 5.3:-54232159 | MS.gene010009:CDS |
TGGCAACATGGAGATTGTGT+TGG | 0.597272 | 5.3:-54240193 | MS.gene010009:CDS |
ACGGCGTGCAGCTTTGTGGA+TGG | 0.597696 | 5.3:-54242477 | MS.gene010009:CDS |
GCCTCCCTTCATCCGGACGA+AGG | 0.598716 | 5.3:+54229560 | None:intergenic |
TTGCAAGACTCGATTTGGAA+AGG | 0.599009 | 5.3:-54233735 | MS.gene010009:CDS |
CCACCATAGCTGTGACGAGT+GGG | 0.600231 | 5.3:-54240108 | MS.gene010009:CDS |
CAGATGACGGTGGCTATGCA+GGG | 0.602369 | 5.3:-54242963 | MS.gene010009:CDS |
TATTCCTCTAAATTGACTGA+TGG | 0.603002 | 5.3:+54229089 | None:intergenic |
CTTTCAATATATACAGATGG+TGG | 0.605039 | 5.3:-54238481 | MS.gene010009:CDS |
CAGAGAATGGTGTTTCAATG+TGG | 0.607195 | 5.3:-54232160 | MS.gene010009:CDS |
TTGATAATGATCAAGTGAAG+AGG | 0.608869 | 5.3:-54236359 | MS.gene010009:CDS |
AAACATGCCGTAGGAGCTGG+AGG | 0.609048 | 5.3:-54243621 | MS.gene010009:CDS |
GTGGTGACATAAGTTTAACT+GGG | 0.609674 | 5.3:-54236320 | MS.gene010009:CDS |
CATCGGACAACCAACCAGAC+CGG | 0.609736 | 5.3:+54243544 | None:intergenic |
TTTGTTCTCAAGAACGAACG+TGG | 0.609869 | 5.3:-54234409 | MS.gene010009:CDS |
CAGTCACAAGACGAATCTTG+TGG | 0.611163 | 5.3:-54229680 | MS.gene010009:CDS |
GAAAGGAATTTGTCTATGCA+AGG | 0.611654 | 5.3:-54233381 | MS.gene010009:CDS |
CGATCCATTAATCACTCAAG+CGG | 0.611996 | 5.3:-54236914 | MS.gene010009:CDS |
CTGAACTGAGGCCATATCAA+CGG | 0.612646 | 5.3:-54242496 | MS.gene010009:CDS |
TTCTTACCAGAGTATACTGG+TGG | 0.614375 | 5.3:-54238670 | MS.gene010009:CDS |
ATCTAATACCACTTTCCTTG+AGG | 0.615046 | 5.3:+54234677 | None:intergenic |
GTATGATGAATGTTATGTCT+TGG | 0.615058 | 5.3:-54243071 | MS.gene010009:CDS |
AATCCTCCACCAGTATACTC+TGG | 0.616662 | 5.3:+54238664 | None:intergenic |
TTTGGATGAGGCTCAAATGG+TGG | 0.616984 | 5.3:-54238639 | MS.gene010009:CDS |
TCTTGGGATTAGGCTTTCGG+AGG | 0.617561 | 5.3:-54243190 | MS.gene010009:CDS |
ATTGCCGCTGCAAGTGATGG+TGG | 0.617570 | 5.3:+54228076 | None:intergenic |
TCCATTAATCACTCAAGCGG+AGG | 0.619058 | 5.3:-54236911 | MS.gene010009:CDS |
CCTGCCACCATCACTTGCAG+CGG | 0.620757 | 5.3:-54228080 | MS.gene010009:CDS |
GCTATGCAGGGAAATGTTCG+AGG | 0.622314 | 5.3:-54242951 | MS.gene010009:CDS |
TCTAGCTCACACAGAACACA+TGG | 0.622488 | 5.3:+54234555 | None:intergenic |
CGGCAAGATTGTGATGAATG+TGG | 0.624114 | 5.3:+54236490 | None:intergenic |
CAGTGACATAAACTTCTCCT+GGG | 0.624621 | 5.3:+54233210 | None:intergenic |
GAGAGGCACTCCTCTTGGGA+GGG | 0.625631 | 5.3:+54237173 | None:intergenic |
TAGATCAGCTAGTAGCCTCA+AGG | 0.625761 | 5.3:-54234692 | MS.gene010009:CDS |
TTTGACCGATTCGATGTACA+CGG | 0.628354 | 5.3:+54228920 | None:intergenic |
AGATATAATTTCATCTGCTG+AGG | 0.630053 | 5.3:-54234386 | MS.gene010009:CDS |
GACAATGGAGGAAGTACTGA+CGG | 0.630688 | 5.3:-54236788 | MS.gene010009:intron |
TGACGAAGTCTCTGGACACA+AGG | 0.632849 | 5.3:+54242175 | None:intergenic |
ACTTTGTAAGGGAATGCGAA+AGG | 0.634733 | 5.3:-54233398 | MS.gene010009:intron |
AGTAATTCGAGATCCTTATG+AGG | 0.635191 | 5.3:-54238453 | MS.gene010009:intron |
GTGATAGTGTAAGCCAAGAG+AGG | 0.636887 | 5.3:+54237156 | None:intergenic |
TATAAGGTAACACTGGCCAA+TGG | 0.639733 | 5.3:+54243364 | None:intergenic |
CAGACAGACATGGCAGATGA+CGG | 0.642499 | 5.3:-54242976 | MS.gene010009:CDS |
ACCTTCGTCCGGATGAAGGG+AGG | 0.642580 | 5.3:-54229561 | MS.gene010009:CDS |
AGTGGTAACAACTAATGGGT+AGG | 0.644264 | 5.3:-54243716 | None:intergenic |
TCAACCCTCACCCTAAGGGA+AGG | 0.646360 | 5.3:+54243162 | None:intergenic |
AGGCATAAAATCAGTAACTG+TGG | 0.649380 | 5.3:-54236339 | MS.gene010009:CDS |
GGCTAGCTCAAACTTTACCC+AGG | 0.650781 | 5.3:-54233227 | MS.gene010009:CDS |
CCAGAACTACTTCCAACCTG+GGG | 0.651744 | 5.3:+54236838 | None:intergenic |
GCTCTCATCTTTGCTCACCG+GGG | 0.651974 | 5.3:-54240385 | MS.gene010009:CDS |
TGTCATAGGTGACTGCTGCA+GGG | 0.653063 | 5.3:+54236807 | None:intergenic |
ATATCAGTATAAGGTAACAC+TGG | 0.653241 | 5.3:+54243357 | None:intergenic |
AGCTGGGCAGACAATGAGAG+TGG | 0.655013 | 5.3:+54240021 | None:intergenic |
ATTGGAATTGCCCTCCCAAG+AGG | 0.655345 | 5.3:-54237183 | MS.gene010009:CDS |
TGACAGTACCGAAACATGCA+CGG | 0.655994 | 5.3:-54243304 | MS.gene010009:CDS |
AGGTGAGAATGAATTATATG+CGG | 0.657815 | 5.3:-54233248 | MS.gene010009:CDS |
AAGGTGAGGAAGCTCTCAGG+AGG | 0.659473 | 5.3:-54236653 | MS.gene010009:CDS |
GAATTGAATAAACATGCCGT+AGG | 0.661956 | 5.3:-54243630 | MS.gene010009:CDS |
TTGAGTGATTAATGGATCGG+AGG | 0.662232 | 5.3:+54236918 | None:intergenic |
TATCGGTGATCTTGCCAGTG+CGG | 0.664641 | 5.3:-54239234 | MS.gene010009:CDS |
GCTGTGCTTCCAAAAGATTG+AGG | 0.665648 | 5.3:+54228998 | None:intergenic |
ACCACCATAGCTGTGACGAG+TGG | 0.669856 | 5.3:-54240109 | MS.gene010009:CDS |
TATTTAACAATGGATCCAGA+CGG | 0.673379 | 5.3:+54236514 | None:intergenic |
CACCATAGCTGTGACGAGTG+GGG | 0.675317 | 5.3:-54240107 | MS.gene010009:CDS |
TGAAGGCTCATATGGAACCA+AGG | 0.678521 | 5.3:-54231312 | MS.gene010009:intron |
GTTAGAAATAGATCAGACGA+TGG | 0.680565 | 5.3:-54234649 | MS.gene010009:CDS |
CTTGTGTCCAGAAAATCCAC+CGG | 0.683194 | 5.3:+54242380 | None:intergenic |
GCAGTCACCTATGACAATGG+AGG | 0.684434 | 5.3:-54236800 | MS.gene010009:CDS |
ATTATCCCACCTGATCGATG+AGG | 0.686590 | 5.3:+54243681 | None:intergenic |
AGCTCACACAGAACACATGG+AGG | 0.689659 | 5.3:+54234558 | None:intergenic |
CAGAGTTACTTCCTGAACTG+AGG | 0.690628 | 5.3:-54242508 | MS.gene010009:CDS |
GCTCACACAGAACACATGGA+GGG | 0.694605 | 5.3:+54234559 | None:intergenic |
TGAATGTGGATATTTAACAA+TGG | 0.700393 | 5.3:+54236504 | None:intergenic |
TCATGATGAAATAAAGATGG+CGG | 0.708492 | 5.3:-54233323 | MS.gene010009:CDS |
GTAAACCTCATCGATCAGGT+GGG | 0.713953 | 5.3:-54243686 | MS.gene010009:CDS |
AATCCTTATCCTTCTCAGCG+TGG | 0.719017 | 5.3:+54234903 | None:intergenic |
ACAGACATGGCAGATGACGG+TGG | 0.722533 | 5.3:-54242973 | MS.gene010009:CDS |
AAGATCGGCATCTATCCTGG+AGG | 0.727756 | 5.3:-54233783 | MS.gene010009:CDS |
CAGAACTACTTCCAACCTGG+GGG | 0.734784 | 5.3:+54236839 | None:intergenic |
AAATCACTGAAATCAAAACG+AGG | 0.750256 | 5.3:-54240154 | MS.gene010009:CDS |
ATAATTTCGTCATGCCACTG+GGG | 0.755274 | 5.3:+54239989 | None:intergenic |
TGGTGACATAAGTTTAACTG+GGG | 0.798157 | 5.3:-54236319 | MS.gene010009:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.3 | gene | 54228039 | 54243724 | 54228039 | ID=MS.gene010009 |
chr5.3 | mRNA | 54228039 | 54243724 | 54228039 | ID=MS.gene010009.t1;Parent=MS.gene010009 |
chr5.3 | exon | 54242910 | 54243724 | 54242910 | ID=MS.gene010009.t1.exon1;Parent=MS.gene010009.t1 |
chr5.3 | CDS | 54242910 | 54243724 | 54242910 | ID=cds.MS.gene010009.t1;Parent=MS.gene010009.t1 |
chr5.3 | exon | 54242353 | 54242559 | 54242353 | ID=MS.gene010009.t1.exon2;Parent=MS.gene010009.t1 |
chr5.3 | CDS | 54242353 | 54242559 | 54242353 | ID=cds.MS.gene010009.t1;Parent=MS.gene010009.t1 |
chr5.3 | exon | 54242147 | 54242208 | 54242147 | ID=MS.gene010009.t1.exon3;Parent=MS.gene010009.t1 |
chr5.3 | CDS | 54242147 | 54242208 | 54242147 | ID=cds.MS.gene010009.t1;Parent=MS.gene010009.t1 |
chr5.3 | exon | 54239986 | 54240442 | 54239986 | ID=MS.gene010009.t1.exon4;Parent=MS.gene010009.t1 |
chr5.3 | CDS | 54239986 | 54240442 | 54239986 | ID=cds.MS.gene010009.t1;Parent=MS.gene010009.t1 |
chr5.3 | exon | 54239137 | 54239337 | 54239137 | ID=MS.gene010009.t1.exon5;Parent=MS.gene010009.t1 |
chr5.3 | CDS | 54239137 | 54239337 | 54239137 | ID=cds.MS.gene010009.t1;Parent=MS.gene010009.t1 |
chr5.3 | exon | 54238454 | 54238712 | 54238454 | ID=MS.gene010009.t1.exon6;Parent=MS.gene010009.t1 |
chr5.3 | CDS | 54238454 | 54238712 | 54238454 | ID=cds.MS.gene010009.t1;Parent=MS.gene010009.t1 |
chr5.3 | exon | 54237051 | 54237291 | 54237051 | ID=MS.gene010009.t1.exon7;Parent=MS.gene010009.t1 |
chr5.3 | CDS | 54237051 | 54237291 | 54237051 | ID=cds.MS.gene010009.t1;Parent=MS.gene010009.t1 |
chr5.3 | exon | 54236789 | 54236961 | 54236789 | ID=MS.gene010009.t1.exon8;Parent=MS.gene010009.t1 |
chr5.3 | CDS | 54236789 | 54236961 | 54236789 | ID=cds.MS.gene010009.t1;Parent=MS.gene010009.t1 |
chr5.3 | exon | 54236125 | 54236700 | 54236125 | ID=MS.gene010009.t1.exon9;Parent=MS.gene010009.t1 |
chr5.3 | CDS | 54236125 | 54236700 | 54236125 | ID=cds.MS.gene010009.t1;Parent=MS.gene010009.t1 |
chr5.3 | exon | 54234830 | 54234990 | 54234830 | ID=MS.gene010009.t1.exon10;Parent=MS.gene010009.t1 |
chr5.3 | CDS | 54234830 | 54234990 | 54234830 | ID=cds.MS.gene010009.t1;Parent=MS.gene010009.t1 |
chr5.3 | exon | 54234542 | 54234758 | 54234542 | ID=MS.gene010009.t1.exon11;Parent=MS.gene010009.t1 |
chr5.3 | CDS | 54234542 | 54234758 | 54234542 | ID=cds.MS.gene010009.t1;Parent=MS.gene010009.t1 |
chr5.3 | exon | 54234249 | 54234449 | 54234249 | ID=MS.gene010009.t1.exon12;Parent=MS.gene010009.t1 |
chr5.3 | CDS | 54234249 | 54234449 | 54234249 | ID=cds.MS.gene010009.t1;Parent=MS.gene010009.t1 |
chr5.3 | exon | 54233694 | 54233810 | 54233694 | ID=MS.gene010009.t1.exon13;Parent=MS.gene010009.t1 |
chr5.3 | CDS | 54233694 | 54233810 | 54233694 | ID=cds.MS.gene010009.t1;Parent=MS.gene010009.t1 |
chr5.3 | exon | 54233168 | 54233410 | 54233168 | ID=MS.gene010009.t1.exon14;Parent=MS.gene010009.t1 |
chr5.3 | CDS | 54233168 | 54233410 | 54233168 | ID=cds.MS.gene010009.t1;Parent=MS.gene010009.t1 |
chr5.3 | exon | 54232140 | 54232344 | 54232140 | ID=MS.gene010009.t1.exon15;Parent=MS.gene010009.t1 |
chr5.3 | CDS | 54232140 | 54232344 | 54232140 | ID=cds.MS.gene010009.t1;Parent=MS.gene010009.t1 |
chr5.3 | exon | 54231313 | 54231524 | 54231313 | ID=MS.gene010009.t1.exon16;Parent=MS.gene010009.t1 |
chr5.3 | CDS | 54231313 | 54231524 | 54231313 | ID=cds.MS.gene010009.t1;Parent=MS.gene010009.t1 |
chr5.3 | exon | 54229558 | 54229709 | 54229558 | ID=MS.gene010009.t1.exon17;Parent=MS.gene010009.t1 |
chr5.3 | CDS | 54229558 | 54229709 | 54229558 | ID=cds.MS.gene010009.t1;Parent=MS.gene010009.t1 |
chr5.3 | exon | 54228891 | 54229125 | 54228891 | ID=MS.gene010009.t1.exon18;Parent=MS.gene010009.t1 |
chr5.3 | CDS | 54228891 | 54229125 | 54228891 | ID=cds.MS.gene010009.t1;Parent=MS.gene010009.t1 |
chr5.3 | exon | 54228039 | 54228299 | 54228039 | ID=MS.gene010009.t1.exon19;Parent=MS.gene010009.t1 |
chr5.3 | CDS | 54228039 | 54228299 | 54228039 | ID=cds.MS.gene010009.t1;Parent=MS.gene010009.t1 |
Gene Sequence |
Protein sequence |