AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene010086

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene010086.t1 MTR_5g066490 94.783 230 8 1 11 236 462 691 4.12e-146 438
MS.gene010086.t1 MTR_5g066490 74.227 194 24 2 229 419 746 916 3.46e-88 286
MS.gene010086.t1 MTR_3g100090 55.273 275 73 7 11 236 425 698 2.09e-77 258
MS.gene010086.t1 MTR_3g100090 61.257 191 54 2 229 419 753 923 1.77e-70 239
MS.gene010086.t1 MTR_1g061190 34.199 462 227 12 11 411 372 817 4.28e-65 223
MS.gene010086.t1 MTR_5g030880 73.973 146 27 2 79 219 52 191 1.76e-63 206
MS.gene010086.t1 MTR_7g064210 69.231 143 9 2 81 219 227 338 5.76e-52 179
MS.gene010086.t1 MTR_6g079540 47.222 180 75 2 229 408 510 669 2.69e-45 167
MS.gene010086.t1 MTR_6g079540 47.222 180 75 2 229 408 758 917 2.85e-45 168
MS.gene010086.t1 MTR_1g050690 30.942 446 210 15 11 407 279 675 1.51e-44 164
MS.gene010086.t1 MTR_2g034020 47.429 175 72 2 237 411 572 726 3.64e-44 164
MS.gene010086.t1 MTR_1g016300 46.629 178 75 2 229 406 761 918 3.94e-44 164
MS.gene010086.t1 MTR_2g022940 57.143 154 24 3 73 219 55 173 1.35e-43 153
MS.gene010086.t1 MTR_1g081790 47.222 180 75 2 229 408 787 946 3.44e-43 162
MS.gene010086.t1 MTR_4g122160 50.625 160 59 2 237 396 566 705 9.72e-43 160
MS.gene010086.t1 MTR_8g107000 44.444 180 80 2 229 408 827 986 1.83e-40 154
MS.gene010086.t1 MTR_5g010730 43.085 188 86 3 229 416 521 687 3.78e-40 152
MS.gene010086.t1 MTR_5g010730 43.085 188 86 3 229 416 576 742 8.60e-40 151
MS.gene010086.t1 MTR_1g081790 48.734 158 61 2 229 386 787 924 1.95e-38 148
MS.gene010086.t1 MTR_2g092980 31.058 293 118 6 171 403 537 805 1.39e-32 130
MS.gene010086.t1 MTR_2g092980 31.058 293 118 6 171 403 501 769 1.51e-32 130
MS.gene010086.t1 MTR_2g092980 31.058 293 118 6 171 403 482 750 1.58e-32 130
MS.gene010086.t1 MTR_2g092980 31.058 293 118 6 171 403 518 786 1.66e-32 130
MS.gene010086.t1 MTR_4g132860 36.095 169 85 4 237 405 191 336 1.11e-27 113
MS.gene010086.t1 MTR_5g023150 34.426 183 97 4 230 412 297 456 5.02e-27 112
MS.gene010086.t1 MTR_5g023150 34.426 183 97 4 230 412 394 553 8.63e-27 112
MS.gene010086.t1 MTR_1g113960 35.795 176 90 4 237 412 407 559 2.33e-26 111
MS.gene010086.t1 MTR_4g105770 35.838 173 88 5 237 409 169 318 6.13e-26 108
MS.gene010086.t1 MTR_1g113960 35.754 179 92 4 230 408 400 555 7.49e-26 110
MS.gene010086.t1 MTR_3g078000 35.326 184 96 5 226 409 157 317 2.16e-25 106
MS.gene010086.t1 MTR_3g078110 35.676 185 92 5 234 418 187 344 3.21e-25 106
MS.gene010086.t1 MTR_1g103270 32.093 215 101 5 222 418 176 363 8.89e-25 105
MS.gene010086.t1 MTR_1g026160 35.465 172 88 4 230 401 244 392 1.42e-24 105
MS.gene010086.t1 MTR_4g080030 37.143 175 84 5 229 403 647 795 2.88e-24 105
MS.gene010086.t1 MTR_5g006560 35.714 182 90 4 237 418 217 371 3.65e-24 103
MS.gene010086.t1 MTR_4g088745 32.000 175 96 4 237 411 157 308 4.94e-24 102
MS.gene010086.t1 MTR_3g114900 34.595 185 98 4 230 414 369 530 5.65e-24 104
MS.gene010086.t1 MTR_4g088755 32.000 175 96 4 237 411 152 303 5.66e-24 102
MS.gene010086.t1 MTR_5g006560 35.714 182 90 4 237 418 251 405 1.22e-23 102
MS.gene010086.t1 MTR_8g100085 33.143 175 94 3 230 404 237 388 1.26e-23 102
MS.gene010086.t1 MTR_3g034100 33.714 175 93 4 230 404 186 337 1.64e-23 101
MS.gene010086.t1 MTR_7g072710 29.268 287 112 11 191 407 45 310 1.81e-23 101
MS.gene010086.t1 MTR_4g106980 34.615 182 92 5 237 418 219 373 2.08e-23 101
MS.gene010086.t1 MTR_4g088750 32.000 175 96 4 237 411 313 464 2.56e-23 102
MS.gene010086.t1 MTR_7g072710 35.000 180 85 7 237 407 117 273 4.93e-23 99.4
MS.gene010086.t1 MTR_4g116520 35.227 176 91 7 237 409 1206 1361 6.79e-23 102
MS.gene010086.t1 MTR_6g007603 34.615 182 92 5 237 418 202 356 7.06e-23 99.8
MS.gene010086.t1 MTR_4g128650 36.313 179 85 6 237 409 925 1080 1.04e-22 101
MS.gene010086.t1 MTR_2g461180 34.682 173 90 7 237 406 1241 1393 2.69e-22 100
MS.gene010086.t1 MTR_1g099110 35.882 170 85 5 230 399 365 510 6.89e-22 98.2
MS.gene010086.t1 MTR_1g099110 35.882 170 85 5 230 399 382 527 6.92e-22 98.6
MS.gene010086.t1 MTR_2g013900 30.286 175 99 4 237 411 274 425 4.12e-21 95.5
MS.gene010086.t1 MTR_8g442400 31.795 195 110 6 226 417 1489 1663 1.26e-20 95.1
MS.gene010086.t1 MTR_6g033130 30.374 214 122 8 200 406 1040 1233 7.84e-20 92.8
MS.gene010086.t1 MTR_8g088590 26.996 263 132 7 190 407 193 440 3.16e-19 89.7
MS.gene010086.t1 MTR_1g090020 30.189 212 124 7 199 406 975 1166 1.60e-18 88.6
MS.gene010086.t1 MTR_3g104900 31.937 191 94 5 228 409 277 440 1.87e-18 87.4
MS.gene010086.t1 MTR_6g004440 26.848 257 151 10 176 409 12 254 2.93e-18 85.5
MS.gene010086.t1 MTR_5g072500 25.000 208 119 7 211 403 398 583 3.84e-15 77.8
MS.gene010086.t1 MTR_4g122160 46.237 93 30 2 237 329 566 638 4.14e-15 77.8
MS.gene010086.t1 MTR_3g062570 28.302 212 109 7 229 419 467 656 5.49e-15 77.4
MS.gene010086.t1 MTR_3g062570 28.302 212 109 7 229 419 603 792 8.00e-15 77.0
MS.gene010086.t1 MTR_3g062570 28.302 212 109 7 229 419 718 907 1.90e-14 75.9
MS.gene010086.t1 MTR_3g465590 26.636 214 120 7 202 400 386 577 3.45e-14 74.7
MS.gene010086.t1 MTR_4g069970 37.398 123 57 4 227 348 238 341 3.64e-14 73.9
MS.gene010086.t1 MTR_2g017825 29.480 173 100 4 237 406 254 407 3.68e-14 74.3
MS.gene010086.t1 MTR_2g017825 29.480 173 100 4 237 406 258 411 3.70e-14 74.3
MS.gene010086.t1 MTR_4g069970 37.398 123 57 4 227 348 238 341 8.26e-14 73.2
MS.gene010086.t1 MTR_4g069970 37.398 123 57 4 227 348 238 341 8.37e-14 73.2
MS.gene010086.t1 MTR_2g082430 27.568 185 100 7 237 409 218 380 1.03e-13 72.8
MS.gene010086.t1 MTR_8g070910 38.843 121 55 5 229 348 374 476 1.09e-13 73.2
MS.gene010086.t1 MTR_5g026510 24.138 406 217 14 57 411 216 581 1.40e-13 72.8
MS.gene010086.t1 MTR_4g107620 27.363 201 110 4 227 411 412 592 1.42e-13 72.8
MS.gene010086.t1 MTR_8g028695 35.772 123 59 4 227 348 242 345 1.49e-13 72.4
MS.gene010086.t1 MTR_7g022160 30.198 202 102 9 228 411 829 1009 1.71e-13 73.2
MS.gene010086.t1 MTR_1g026160 36.842 133 60 5 230 361 244 353 2.23e-13 71.2
MS.gene010086.t1 MTR_1g026160 36.842 133 60 5 230 361 242 351 2.31e-13 71.2
MS.gene010086.t1 MTR_3g076970 25.806 279 152 13 174 403 14 286 2.31e-13 71.2
MS.gene010086.t1 MTR_1g026160 36.842 133 60 5 230 361 242 351 2.37e-13 71.6
MS.gene010086.t1 MTR_1g026160 36.842 133 60 5 230 361 244 353 2.48e-13 71.2
MS.gene010086.t1 MTR_1g026160 36.842 133 60 5 230 361 389 498 2.68e-13 72.0
MS.gene010086.t1 MTR_5g091880 30.460 174 101 6 237 406 270 427 2.90e-13 71.6
MS.gene010086.t1 MTR_1g026160 36.842 133 60 5 230 361 389 498 2.97e-13 71.6
MS.gene010086.t1 MTR_2g094910 30.811 185 94 7 234 400 184 352 3.44e-13 71.2
MS.gene010086.t1 MTR_7g115300 29.348 184 88 6 237 400 635 796 7.02e-13 70.9
MS.gene010086.t1 MTR_8g093090 30.201 149 79 4 239 385 2 127 8.24e-13 70.5
MS.gene010086.t1 MTR_7g022050 31.088 193 99 9 228 404 454 628 9.18e-13 70.5
MS.gene010086.t1 MTR_8g093090 30.201 149 79 4 239 385 64 189 1.08e-12 70.1
MS.gene010086.t1 MTR_8g093090 30.201 149 79 4 239 385 164 289 1.14e-12 70.1
MS.gene010086.t1 MTR_8g093090 30.201 149 79 4 239 385 146 271 1.20e-12 70.1
MS.gene010086.t1 MTR_7g114680 30.857 175 88 7 238 410 136 279 1.72e-12 69.7
MS.gene010086.t1 MTR_5g017080 37.607 117 53 4 233 348 271 368 1.76e-12 69.3
MS.gene010086.t1 MTR_2g104790 26.000 200 105 6 237 419 229 402 2.01e-12 68.9
MS.gene010086.t1 MTR_7g114680 30.857 175 88 7 238 410 122 265 2.28e-12 69.3
MS.gene010086.t1 MTR_5g017080 37.931 116 52 4 234 348 272 368 2.53e-12 68.6
MS.gene010086.t1 MTR_5g086330 28.571 203 102 8 234 413 48 230 2.73e-12 67.0
MS.gene010086.t1 MTR_7g078730 35.537 121 58 4 229 348 261 362 4.17e-12 68.2
MS.gene010086.t1 MTR_4g123880 34.959 123 60 4 227 348 277 380 4.37e-12 68.2
MS.gene010086.t1 MTR_8g070880 29.442 197 105 8 229 409 727 905 4.37e-12 68.6
MS.gene010086.t1 MTR_3g116590 34.146 123 61 3 227 348 232 335 4.41e-12 67.8
MS.gene010086.t1 MTR_4g123880 32.520 123 63 2 227 348 277 380 5.58e-12 67.8
MS.gene010086.t1 MTR_3g116590 34.146 123 61 3 227 348 232 335 5.63e-12 67.8
MS.gene010086.t1 MTR_2g014960 38.017 121 56 5 229 348 709 811 6.84e-12 68.2
MS.gene010086.t1 MTR_5g091380 28.646 192 102 8 229 404 283 455 7.27e-12 67.4
MS.gene010086.t1 MTR_3g062590 26.804 194 107 4 229 406 720 894 7.52e-12 67.8
MS.gene010086.t1 MTR_5g014700 27.917 240 128 9 191 414 764 974 8.60e-12 67.8
MS.gene010086.t1 MTR_1g103850 30.286 175 88 6 238 410 136 278 8.66e-12 67.4
MS.gene010086.t1 MTR_2g046130 34.711 121 59 4 229 348 284 385 1.30e-11 66.6
MS.gene010086.t1 MTR_2g028580 29.381 194 104 7 229 407 737 912 1.72e-11 66.6
MS.gene010086.t1 MTR_2g028580 29.381 194 104 7 229 407 725 900 1.99e-11 66.6
MS.gene010086.t1 MTR_1g026160 36.522 115 50 4 230 344 242 333 2.16e-11 65.1
MS.gene010086.t1 MTR_5g047070 26.702 191 101 8 237 407 379 550 2.23e-11 65.9
MS.gene010086.t1 MTR_4g097880 26.891 238 127 8 191 411 761 968 2.24e-11 66.2
MS.gene010086.t1 MTR_5g019700 30.387 181 89 10 237 407 152 305 2.46e-11 65.5
MS.gene010086.t1 MTR_7g021570 24.747 198 118 6 227 407 715 898 3.58e-11 65.9
MS.gene010086.t1 MTR_5g075650 30.000 190 108 8 229 407 714 889 4.44e-11 65.5
MS.gene010086.t1 MTR_5g059880 26.087 184 102 6 224 401 286 441 4.76e-11 64.7
MS.gene010086.t1 MTR_5g047120 26.702 191 101 8 237 407 620 791 7.48e-11 64.7
MS.gene010086.t1 MTR_1g102500 27.807 187 102 6 237 410 770 936 9.01e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene010086.t1 AT4G24480 41.719 477 202 11 11 418 474 943 4.01e-105 332
MS.gene010086.t1 AT4G24480 62.632 190 51 2 229 418 769 938 6.76e-72 243
MS.gene010086.t1 AT4G24480 41.909 241 125 5 11 236 474 714 2.44e-47 174
MS.gene010086.t1 AT4G24480 62.632 190 51 2 229 418 769 938 7.78e-72 243
MS.gene010086.t1 AT4G24480 41.909 241 125 4 11 236 474 714 2.87e-47 174
MS.gene010086.t1 AT3G06640 36.268 284 101 5 185 408 440 703 1.14e-46 171
MS.gene010086.t1 AT3G06640 36.268 284 101 5 185 408 440 703 1.14e-46 171
MS.gene010086.t1 AT5G49470 48.837 172 68 2 237 408 310 461 1.33e-46 167
MS.gene010086.t1 AT3G06640 36.268 284 101 5 185 408 440 703 1.60e-46 171
MS.gene010086.t1 AT5G49470 48.045 179 73 2 230 408 651 809 1.80e-46 171
MS.gene010086.t1 AT5G03730 51.445 173 64 2 237 409 659 811 3.34e-46 170
MS.gene010086.t1 AT5G03730 33.333 237 107 7 11 236 400 596 2.59e-23 103
MS.gene010086.t1 AT5G03730 51.445 173 64 2 237 409 659 811 3.34e-46 170
MS.gene010086.t1 AT5G03730 33.333 237 107 7 11 236 400 596 2.59e-23 103
MS.gene010086.t1 AT5G49470 48.837 172 68 2 237 408 470 621 6.81e-46 168
MS.gene010086.t1 AT5G49470 48.837 172 68 2 237 408 597 748 1.02e-45 169
MS.gene010086.t1 AT5G49470 48.837 172 68 2 237 408 571 722 1.75e-45 167
MS.gene010086.t1 AT5G11850 46.067 178 76 2 229 406 707 864 1.49e-43 163
MS.gene010086.t1 AT1G08720 47.753 178 73 2 229 406 767 924 4.72e-43 161
MS.gene010086.t1 AT1G73660 47.222 180 75 2 229 408 846 1005 6.12e-43 161
MS.gene010086.t1 AT1G18160 46.448 183 72 2 229 408 813 972 7.26e-43 161
MS.gene010086.t1 AT4G23050 44.385 187 84 3 229 415 566 732 1.90e-42 159
MS.gene010086.t1 AT4G23050 44.385 187 84 3 229 415 565 731 2.11e-42 159
MS.gene010086.t1 AT1G67890 45.930 172 72 3 237 408 593 743 3.99e-42 158
MS.gene010086.t1 AT3G06630 44.186 172 76 2 237 408 540 691 4.03e-41 155
MS.gene010086.t1 AT3G06620 43.023 172 78 2 237 408 600 751 2.26e-39 150
MS.gene010086.t1 AT1G08720 48.101 158 62 2 229 386 767 904 1.63e-37 145
MS.gene010086.t1 AT1G67890 48.667 150 56 3 237 386 465 593 1.70e-37 144
MS.gene010086.t1 AT1G67890 48.667 150 56 3 237 386 593 721 2.78e-37 144
MS.gene010086.t1 AT1G67890 48.667 150 56 3 237 386 593 721 2.78e-37 144
MS.gene010086.t1 AT3G06630 47.333 150 59 2 237 386 540 669 2.96e-37 144
MS.gene010086.t1 AT1G18160 47.205 161 59 2 229 386 813 950 1.30e-36 142
MS.gene010086.t1 AT3G58640 29.252 294 123 7 170 403 533 801 7.48e-31 125
MS.gene010086.t1 AT3G58640 29.252 294 123 7 170 403 533 801 7.48e-31 125
MS.gene010086.t1 AT2G42640 31.250 272 145 10 170 404 508 774 4.67e-28 117
MS.gene010086.t1 AT2G42640 31.250 272 145 10 170 404 470 736 4.91e-28 117
MS.gene010086.t1 AT1G62400 37.278 169 83 5 237 405 197 342 3.69e-27 112
MS.gene010086.t1 AT3G06630 46.281 121 45 2 237 357 456 556 6.59e-27 113
MS.gene010086.t1 AT3G06630 46.281 121 45 2 237 357 540 640 1.01e-26 113
MS.gene010086.t1 AT3G06630 46.281 121 45 2 237 357 540 640 1.01e-26 113
MS.gene010086.t1 AT3G06630 46.281 121 45 2 237 357 540 640 1.01e-26 113
MS.gene010086.t1 AT5G49470 47.934 121 43 2 237 357 597 697 1.89e-26 112
MS.gene010086.t1 AT4G35780 34.973 183 96 4 230 412 391 550 2.50e-26 111
MS.gene010086.t1 AT5G49470 47.500 120 43 2 237 356 597 696 6.86e-26 110
MS.gene010086.t1 AT2G31010 39.521 167 75 6 237 403 627 767 3.22e-25 108
MS.gene010086.t1 AT2G31010 39.521 167 75 6 237 403 627 767 3.22e-25 108
MS.gene010086.t1 AT2G17700 34.637 179 94 4 230 408 385 540 1.08e-24 106
MS.gene010086.t1 AT5G50000 35.165 182 91 5 237 418 212 366 1.16e-24 105
MS.gene010086.t1 AT3G01490 35.714 182 90 5 237 418 238 392 3.06e-24 104
MS.gene010086.t1 AT5G58950 31.176 170 94 4 237 406 320 466 6.43e-24 104
MS.gene010086.t1 AT4G38470 32.778 180 98 4 238 417 397 553 9.81e-24 103
MS.gene010086.t1 AT4G14780 33.333 189 99 4 230 418 184 345 2.39e-23 100
MS.gene010086.t1 AT3G22750 34.615 182 92 5 237 418 205 359 2.70e-23 100
MS.gene010086.t1 AT5G01850 35.632 174 81 7 243 406 130 282 3.19e-23 100
MS.gene010086.t1 AT4G38470 33.728 169 89 4 238 406 397 542 3.26e-23 102
MS.gene010086.t1 AT5G01850 35.632 174 81 7 243 406 154 306 5.87e-23 99.8
MS.gene010086.t1 AT4G31170 24.113 282 130 5 186 404 126 386 1.47e-22 99.4
MS.gene010086.t1 AT4G31170 24.113 282 130 5 186 404 126 386 1.47e-22 99.4
MS.gene010086.t1 AT4G31170 24.113 282 130 5 186 404 126 386 1.47e-22 99.4
MS.gene010086.t1 AT4G31170 24.113 282 130 5 186 404 126 386 1.47e-22 99.4
MS.gene010086.t1 AT4G31170 24.113 282 130 5 186 404 126 386 1.47e-22 99.4
MS.gene010086.t1 AT4G31170 24.113 282 130 5 186 404 126 386 1.47e-22 99.4
MS.gene010086.t1 AT4G31170 24.113 282 130 5 186 404 126 386 1.47e-22 99.4
MS.gene010086.t1 AT2G24360 30.857 175 98 3 230 404 234 385 1.96e-22 99.0
MS.gene010086.t1 AT3G46930 33.696 184 97 7 228 409 266 426 4.88e-22 98.6
MS.gene010086.t1 AT3G46920 34.112 214 113 9 199 406 947 1138 5.57e-22 99.4
MS.gene010086.t1 AT3G63260 33.508 191 100 5 228 418 209 372 6.32e-22 97.1
MS.gene010086.t1 AT3G46930 33.696 184 97 7 228 409 301 461 6.45e-22 98.2
MS.gene010086.t1 AT3G46920 34.112 214 113 9 199 406 881 1072 6.91e-22 99.0
MS.gene010086.t1 AT5G57610 32.870 216 111 8 200 406 857 1047 1.58e-21 97.8
MS.gene010086.t1 AT2G35050 30.876 217 121 8 199 409 1049 1242 2.92e-21 97.1
MS.gene010086.t1 AT2G35050 30.876 217 121 8 199 409 1049 1242 2.92e-21 97.1
MS.gene010086.t1 AT1G16270 32.812 192 103 7 219 404 956 1127 7.29e-21 95.9
MS.gene010086.t1 AT1G16270 32.812 192 103 7 219 404 956 1127 7.29e-21 95.9
MS.gene010086.t1 AT1G16270 32.812 192 103 7 219 404 956 1127 7.29e-21 95.9
MS.gene010086.t1 AT1G79570 31.604 212 117 8 199 404 1039 1228 7.36e-21 95.9
MS.gene010086.t1 AT1G79570 31.604 212 117 8 199 404 1039 1228 7.36e-21 95.9
MS.gene010086.t1 AT1G04700 33.523 176 94 6 234 406 877 1032 3.53e-20 94.0
MS.gene010086.t1 AT1G04700 33.523 176 94 6 234 406 877 1032 3.53e-20 94.0
MS.gene010086.t1 AT3G24715 32.370 173 94 6 237 406 950 1102 8.66e-19 89.7
MS.gene010086.t1 AT3G24715 32.370 173 94 6 237 406 950 1102 8.66e-19 89.7
MS.gene010086.t1 AT3G24715 32.370 173 94 6 237 406 950 1102 8.66e-19 89.7
MS.gene010086.t1 AT5G40540 39.423 104 54 4 314 409 93 195 3.83e-16 78.2
MS.gene010086.t1 AT5G40540 39.423 104 54 4 314 409 114 216 4.72e-16 78.6
MS.gene010086.t1 AT2G31800 28.571 175 107 4 237 407 298 458 6.59e-16 79.7
MS.gene010086.t1 AT5G40540 25.373 268 150 9 191 409 26 292 8.29e-16 78.6
MS.gene010086.t1 AT5G58520 27.143 210 116 7 209 403 411 598 1.09e-15 79.7
MS.gene010086.t1 AT3G27560 25.784 287 162 11 172 409 8 292 1.20e-15 78.2
MS.gene010086.t1 AT3G58760 30.814 172 100 6 237 404 269 425 3.99e-15 77.4
MS.gene010086.t1 AT3G58760 30.726 179 105 6 230 404 325 488 6.28e-15 77.0
MS.gene010086.t1 AT3G58760 30.726 179 105 6 230 404 325 488 6.28e-15 77.0
MS.gene010086.t1 AT3G59830 28.571 175 107 4 237 407 299 459 7.62e-15 76.6
MS.gene010086.t1 AT5G66710 31.319 182 90 9 237 409 181 336 7.94e-15 76.3
MS.gene010086.t1 AT5G50180 34.091 176 83 10 237 403 129 280 9.08e-15 75.5
MS.gene010086.t1 AT3G06630 43.011 93 33 2 237 329 540 612 9.52e-15 76.6
MS.gene010086.t1 AT3G46930 33.333 147 73 7 228 372 205 328 7.99e-14 72.8
MS.gene010086.t1 AT3G46930 33.333 147 73 7 228 372 266 389 1.55e-13 72.4
MS.gene010086.t1 AT3G46930 33.333 147 73 7 228 372 301 424 1.62e-13 72.4
MS.gene010086.t1 AT3G46930 33.333 147 73 7 228 372 301 424 1.81e-13 72.4
MS.gene010086.t1 AT5G07140 28.144 167 94 6 237 399 429 573 1.97e-13 72.4
MS.gene010086.t1 AT1G79620 37.190 121 57 5 229 348 736 838 1.99e-13 72.8
MS.gene010086.t1 AT4G34500 36.585 123 58 4 227 348 245 348 2.04e-13 72.0
MS.gene010086.t1 AT1G79620 37.190 121 57 5 229 348 762 864 2.34e-13 72.8
MS.gene010086.t1 AT1G01540 35.772 123 59 4 227 348 252 355 2.45e-13 72.0
MS.gene010086.t1 AT1G31420 25.871 201 113 6 227 411 402 582 3.03e-13 72.0
MS.gene010086.t1 AT1G31420 25.871 201 113 6 227 411 402 582 3.03e-13 72.0
MS.gene010086.t1 AT1G31420 25.871 201 113 6 227 411 401 581 3.08e-13 72.0
MS.gene010086.t1 AT5G62710 27.228 202 111 5 229 414 378 559 3.54e-13 71.6
MS.gene010086.t1 AT1G01540 35.772 123 59 4 227 348 252 355 4.75e-13 70.9
MS.gene010086.t1 AT5G62710 27.228 202 111 5 229 414 412 593 5.05e-13 71.2
MS.gene010086.t1 AT5G28680 28.889 180 94 7 237 400 627 788 7.56e-13 70.9
MS.gene010086.t1 AT5G28680 28.889 180 94 7 237 400 627 788 7.56e-13 70.9
MS.gene010086.t1 AT4G01330 34.959 123 60 4 227 348 260 363 1.26e-12 69.7
MS.gene010086.t1 AT4G01330 34.959 123 60 4 227 348 260 363 1.28e-12 69.7
MS.gene010086.t1 AT4G02630 37.931 116 52 4 234 348 268 364 1.48e-12 69.7
MS.gene010086.t1 AT4G01330 34.959 123 60 4 227 348 260 363 1.97e-12 68.9
MS.gene010086.t1 AT3G53590 29.032 186 109 6 234 409 724 896 2.28e-12 69.7
MS.gene010086.t1 AT1G06840 27.179 195 101 6 229 404 723 895 2.86e-12 69.3
MS.gene010086.t1 AT4G32000 27.273 209 108 7 229 419 229 411 3.03e-12 68.6
MS.gene010086.t1 AT4G32000 27.273 209 108 7 229 419 228 410 3.16e-12 68.2
MS.gene010086.t1 AT5G16900 27.184 206 116 6 227 417 484 670 4.37e-12 68.6
MS.gene010086.t1 AT4G32000 27.273 209 108 7 229 419 271 453 5.07e-12 67.8
MS.gene010086.t1 AT5G16900 27.184 206 116 6 227 417 670 856 5.89e-12 68.2
MS.gene010086.t1 AT5G16900 27.184 206 116 6 227 417 670 856 5.89e-12 68.2
MS.gene010086.t1 AT4G31100 28.351 194 103 6 237 413 552 726 5.91e-12 68.2
MS.gene010086.t1 AT3G19700 33.621 116 60 2 234 348 793 892 6.87e-12 68.2
MS.gene010086.t1 AT3G22420 30.909 165 97 7 238 388 136 297 7.03e-12 67.8
MS.gene010086.t1 AT3G22420 30.909 165 97 7 238 388 136 297 8.30e-12 67.4
MS.gene010086.t1 AT2G04300 27.551 196 108 6 229 409 640 816 8.62e-12 67.8
MS.gene010086.t1 AT2G04300 27.551 196 108 6 229 409 681 857 8.94e-12 67.8
MS.gene010086.t1 AT3G46290 26.500 200 105 6 229 408 583 760 9.24e-12 67.4
MS.gene010086.t1 AT5G18500 34.711 121 59 4 229 348 266 367 1.23e-11 66.6
MS.gene010086.t1 AT5G18500 34.711 121 59 4 229 348 266 367 1.23e-11 66.6
MS.gene010086.t1 AT5G18500 34.711 121 59 4 229 348 266 367 1.23e-11 66.6
MS.gene010086.t1 AT5G18500 34.711 121 59 4 229 348 266 367 1.23e-11 66.6
MS.gene010086.t1 AT5G18500 34.711 121 59 4 229 348 266 367 1.23e-11 66.6
MS.gene010086.t1 AT5G18500 34.711 121 59 4 229 348 266 367 1.23e-11 66.6
MS.gene010086.t1 AT5G65700 27.731 238 123 9 191 410 766 972 1.25e-11 67.4
MS.gene010086.t1 AT5G65700 27.731 238 123 9 191 410 766 972 1.25e-11 67.4
MS.gene010086.t1 AT2G25220 26.316 209 110 6 229 419 196 378 2.13e-11 65.5
MS.gene010086.t1 AT5G59650 28.283 198 106 7 228 409 677 854 2.87e-11 66.2
MS.gene010086.t1 AT5G59650 28.283 198 106 7 228 409 685 862 2.96e-11 65.9
MS.gene010086.t1 AT1G19390 27.179 195 106 6 237 414 558 733 3.33e-11 65.9
MS.gene010086.t1 AT2G25220 26.316 209 110 6 229 419 245 427 3.35e-11 65.1
MS.gene010086.t1 AT2G25220 26.316 209 110 6 229 419 250 432 3.92e-11 65.1
MS.gene010086.t1 AT2G25220 29.193 161 87 4 229 383 196 335 4.36e-11 64.7
MS.gene010086.t1 AT2G25220 29.193 161 87 4 229 383 245 384 6.20e-11 64.3

Find 105 sgRNAs with CRISPR-Local

Find 288 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTTCAAGATTCACATATTT+TGG 0.083444 5.2:+56355535 None:intergenic
AGCAAATCAGTTTCTTTATT+TGG 0.126811 5.2:+56355895 None:intergenic
TTATGCTCAGGTTGTGATTT+TGG 0.154366 5.2:-56354417 MS.gene010086:intron
TGACTTTAGCAGCTTCTTTA+TGG 0.225672 5.2:+56352387 None:intergenic
TCTCATTGTAAGAAATTTCT+TGG 0.257410 5.2:+56355650 None:intergenic
TCTAACAATCAATTGTATTC+AGG 0.269209 5.2:-56356362 MS.gene010086:intron
TTTATTTATGCAGGATCATT+TGG 0.282685 5.2:-56355369 MS.gene010086:intron
CACATATGCTCCATTAATTA+AGG 0.295572 5.2:+56356490 None:intergenic
GGGCCAGATTCCTTAATTAA+TGG 0.308428 5.2:-56356500 MS.gene010086:CDS
AAGTCTGATGTTTACAGTTT+TGG 0.311358 5.2:-56353252 MS.gene010086:CDS
GAAAGTATTTGCCTTAAATC+TGG 0.315219 5.2:+56354389 None:intergenic
TCCATAAGGGATGCTAATAC+TGG 0.334106 5.2:+56352991 None:intergenic
TTGTCATCAAAATCTGTTGC+TGG 0.340847 5.2:-56354366 MS.gene010086:CDS
CCCAGTATTAGCATCCCTTA+TGG 0.343578 5.2:-56352992 MS.gene010086:CDS
CTCAAATGAGAAATTTGAAA+TGG 0.348440 5.2:+56356452 None:intergenic
TCTGGCCCGGTGATATTTCC+TGG 0.351222 5.2:+56356515 None:intergenic
CATCCCTTATGGAATCTTGT+TGG 0.356382 5.2:-56352981 MS.gene010086:CDS
TGTAATAATGCTTCAGAGGC+TGG 0.356384 5.2:+56355709 None:intergenic
CTACTTGTTCCTGCTTTGAC+TGG 0.365162 5.2:+56355593 None:intergenic
ACATCAGACTTCTCGTTTGT+AGG 0.368339 5.2:+56353264 None:intergenic
GCCCCATTGCTCGAGGTTGC+AGG 0.372006 5.2:-56356952 MS.gene010086:CDS
ATCCCTTATGGAATCTTGTT+GGG 0.372592 5.2:-56352980 MS.gene010086:CDS
TGAAGCCTCCGATCGTGCAC+TGG 0.375003 5.2:-56354569 MS.gene010086:CDS
AAGGGAAGTTCAGTGGTAAA+TGG 0.375926 5.2:-56355619 MS.gene010086:CDS
AGTATGTTGTTGACCTTGTT+GGG 0.376604 5.2:-56356541 MS.gene010086:CDS
GCTCCATTAATTAAGGAATC+TGG 0.394991 5.2:+56356497 None:intergenic
TACCTGCAACCTCGAGCAAT+GGG 0.402931 5.2:+56356950 None:intergenic
CAATTATTTGATGCTGCCTT+GGG 0.410417 5.2:-56354034 MS.gene010086:CDS
GCTTCAGTTGATAAAACTCC+TGG 0.412970 5.2:-56355847 MS.gene010086:CDS
GAGACGTTTGGAGGGATAGA+AGG 0.414047 5.2:+56353015 None:intergenic
TTATTTATGCAGGATCATTT+GGG 0.416542 5.2:-56355368 MS.gene010086:intron
GCAAAAGATGGGCGATCAGC+AGG 0.417048 5.2:+56352424 None:intergenic
GCTAATACTGGGGAGACGTT+TGG 0.426630 5.2:+56353003 None:intergenic
TCCATTCCATGGTTGTTGTA+AGG 0.427541 5.2:+56353206 None:intergenic
TTACATGACATTCCGTTTGT+TGG 0.428198 5.2:-56355691 MS.gene010086:CDS
GACTTTATAACCAGGGTGCT+GGG 0.441266 5.2:-56355564 MS.gene010086:CDS
TGGACTGGCTTGAGATATCA+TGG 0.445535 5.2:-56355501 MS.gene010086:CDS
CGACTTTATAACCAGGGTGC+TGG 0.445882 5.2:-56355565 MS.gene010086:CDS
TCAATTATTTGATGCTGCCT+TGG 0.452398 5.2:-56354035 MS.gene010086:CDS
CAGCCCAACAAGATTCCATA+AGG 0.462865 5.2:+56352977 None:intergenic
TCAACTATGCTAGCAAAAGA+TGG 0.467565 5.2:+56352412 None:intergenic
GAGTATGTTGTTGACCTTGT+TGG 0.468190 5.2:-56356542 MS.gene010086:CDS
TACAATGAGATCATTGCAAA+GGG 0.494339 5.2:-56355637 MS.gene010086:CDS
GTTGACCTTGTTGGGGAACC+AGG 0.495325 5.2:-56356533 MS.gene010086:CDS
ACTGAATCTTTACCAACAAA+CGG 0.496994 5.2:+56355679 None:intergenic
CCATAAGGGATGCTAATACT+GGG 0.498752 5.2:+56352992 None:intergenic
ATCAAAGAACGCATTGGTGC+TGG 0.498755 5.2:-56355466 MS.gene010086:intron
ATTGATTGTTAGAAGAACTC+TGG 0.501361 5.2:+56356372 None:intergenic
AATACTGGGGAGACGTTTGG+AGG 0.504363 5.2:+56353006 None:intergenic
CAACCTCGAGCAATGGGGCA+TGG 0.515209 5.2:+56356956 None:intergenic
CATGTGTATGCTCAGGTGGT+TGG 0.515467 5.2:-56353063 MS.gene010086:intron
TTGAGATCCCAGTGCACGAT+CGG 0.517907 5.2:+56354561 None:intergenic
TAAACAAATTTACCTGGGCA+TGG 0.531670 5.2:+56353178 None:intergenic
GTAATAATGCTTCAGAGGCT+GGG 0.531732 5.2:+56355710 None:intergenic
GGACAGTATACCGTGCTGAA+TGG 0.532777 5.2:-56355347 MS.gene010086:CDS
TTACAATGAGATCATTGCAA+AGG 0.535482 5.2:-56355638 MS.gene010086:CDS
ATGGCTCCAGAGTTTCTTCG+TGG 0.536115 5.2:-56353291 MS.gene010086:CDS
GAAGCCTCCGATCGTGCACT+GGG 0.543135 5.2:-56354568 MS.gene010086:CDS
GGTTCTCCACGAAGAAACTC+TGG 0.544195 5.2:+56353285 None:intergenic
AGCCAGTCCATTGCTAGTGA+TGG 0.551807 5.2:+56355514 None:intergenic
AAATGGTATCCAGTCAAAGC+AGG 0.553596 5.2:-56355602 MS.gene010086:CDS
AACTCTGGAGCCATCCACTC+AGG 0.554183 5.2:+56353300 None:intergenic
GTACCTGCAACCTCGAGCAA+TGG 0.556516 5.2:+56356949 None:intergenic
TCTTGAACCATCACTAGCAA+TGG 0.564083 5.2:-56355521 MS.gene010086:CDS
GAGTGCATGCTTACCACCCA+AGG 0.565424 5.2:+56354018 None:intergenic
TGAGAAATTTGAAATGGAGA+AGG 0.565947 5.2:+56356458 None:intergenic
AACCATCACTAGCAATGGAC+TGG 0.566572 5.2:-56355516 MS.gene010086:CDS
CATAAGGGATGCTAATACTG+GGG 0.566860 5.2:+56352993 None:intergenic
CAACTATGCTAGCAAAAGAT+GGG 0.570297 5.2:+56352413 None:intergenic
GGGGAACCAGGAAATATCAC+CGG 0.571192 5.2:-56356521 MS.gene010086:CDS
ATTAATTAAGGAATCTGGCC+CGG 0.574159 5.2:+56356502 None:intergenic
GTATGTTGTTGACCTTGTTG+GGG 0.577494 5.2:-56356540 MS.gene010086:CDS
GAATGGACTTAGCCATGCCC+AGG 0.578828 5.2:-56353190 MS.gene010086:intron
AGCCCAACAAGATTCCATAA+GGG 0.583261 5.2:+56352978 None:intergenic
TATTTCCTGGTTCCCCAACA+AGG 0.583437 5.2:+56356528 None:intergenic
ACCTTACAACAACCATGGAA+TGG 0.583688 5.2:-56353207 MS.gene010086:CDS
TTGCCATGCCCCATTGCTCG+AGG 0.588885 5.2:-56356959 None:intergenic
CGATCGGAGGCTTCAGACAG+TGG 0.593197 5.2:+56354577 None:intergenic
GTCATGTAATAATGCTTCAG+AGG 0.593398 5.2:+56355705 None:intergenic
CTGCGGATCAAAGAACGCAT+TGG 0.597029 5.2:-56355472 MS.gene010086:CDS
TGGTTAAAACTTATAACTTG+AGG 0.597234 5.2:+56356392 None:intergenic
TTATTTGATGCTGCCTTGGG+TGG 0.598906 5.2:-56354031 MS.gene010086:intron
GGGAACCAGGAAATATCACC+GGG 0.603181 5.2:-56356520 MS.gene010086:CDS
TCTCAAATCTCCAAACCTGT+TGG 0.603525 5.2:-56354544 MS.gene010086:CDS
GCATGGCTAAGTCCATTCCA+TGG 0.604826 5.2:+56353195 None:intergenic
CAAAAGATGGGCGATCAGCA+GGG 0.611009 5.2:+56352425 None:intergenic
CTGATCCATGCCATTCAGCA+CGG 0.617741 5.2:+56355337 None:intergenic
GAAAATCGACTTTATAACCA+GGG 0.618993 5.2:-56355571 MS.gene010086:CDS
GATGCTGCATCATCCACGTA+GGG 0.620434 5.2:+56356416 None:intergenic
ACTTTATAACCAGGGTGCTG+GGG 0.624858 5.2:-56355563 MS.gene010086:CDS
AGATCCCAGTGCACGATCGG+AGG 0.624997 5.2:+56354564 None:intergenic
AGAAAATCGACTTTATAACC+AGG 0.631769 5.2:-56355572 MS.gene010086:CDS
CATTGCAAAGGGAAGTTCAG+TGG 0.632388 5.2:-56355626 MS.gene010086:CDS
AGATATCATGGGATGAGCTG+CGG 0.633760 5.2:-56355489 MS.gene010086:CDS
TTGGAATATCCCCAGCACCC+TGG 0.634335 5.2:+56355554 None:intergenic
GTATACCGTGCTGAATGGCA+TGG 0.638505 5.2:-56355342 MS.gene010086:CDS
TCTGCTATTCTGAAATGCGA+CGG 0.639831 5.2:+56353038 None:intergenic
TAGTGACCTTACAACAACCA+TGG 0.641251 5.2:-56353212 MS.gene010086:CDS
AAAATCTCAATCGCCCTACG+TGG 0.662864 5.2:-56356429 MS.gene010086:CDS
ATACTGGGGAGACGTTTGGA+GGG 0.664508 5.2:+56353007 None:intergenic
AGATGCTGCATCATCCACGT+AGG 0.674401 5.2:+56356415 None:intergenic
GGACTGGCTTGAGATATCAT+GGG 0.699073 5.2:-56355500 MS.gene010086:CDS
TCAGTTGATAAAACTCCTGG+AGG 0.706730 5.2:-56355844 MS.gene010086:intron
GAAGCTGCTAAAGTCACCAG+CGG 0.706962 5.2:-56352380 MS.gene010086:CDS
ACCTGCAACCTCGAGCAATG+GGG 0.739916 5.2:+56356951 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATTAAGAAATAAACTTGA+TGG + chr5.2:56352484-56352503 None:intergenic 15.0%
!! GAATTCATAATTTATTAGAA+AGG + chr5.2:56356483-56356502 None:intergenic 15.0%
!! TTCTAATAAATTATGAATTC+TGG - chr5.2:56356483-56356502 MS.gene010086:CDS 15.0%
!!! AAATTTGTTGTATTTAGAAA+AGG + chr5.2:56354477-56354496 None:intergenic 15.0%
!!! ATATATATATATCAGGATTT+TGG - chr5.2:56352650-56352669 MS.gene010086:intron 15.0%
!!! GTTTTTAAAATATTTGTGAA+AGG - chr5.2:56354847-56354866 MS.gene010086:intron 15.0%
!! AAATCTAAATAACGACTAAA+TGG - chr5.2:56355817-56355836 MS.gene010086:intron 20.0%
!! AAGTGTATATATTCTAATGT+AGG - chr5.2:56356453-56356472 MS.gene010086:CDS 20.0%
!! AATTACTAAACAAATTTACC+TGG + chr5.2:56356139-56356158 None:intergenic 20.0%
!! ACATGAATAACTTAAATTGT+AGG - chr5.2:56354662-56354681 MS.gene010086:intron 20.0%
!! ACATTTGTTTAATCAATACT+AGG + chr5.2:56354313-56354332 None:intergenic 20.0%
!! AGTTAATTATGCTTTGTATT+GGG - chr5.2:56354063-56354082 MS.gene010086:CDS 20.0%
!! ATTACTAAACAAATTTACCT+GGG + chr5.2:56356138-56356157 None:intergenic 20.0%
!! ATTTATACCCTACTATAAAT+AGG + chr5.2:56353080-56353099 None:intergenic 20.0%
!! ATTTATTTAATTCCTTTGTC+AGG - chr5.2:56352743-56352762 MS.gene010086:intron 20.0%
!! CAATTAATACTTACATTCAA+TGG + chr5.2:56354407-56354426 None:intergenic 20.0%
!! GGTATATCTATTTATTGTAT+AGG - chr5.2:56354340-56354359 MS.gene010086:intron 20.0%
!! GTTTAGATAAATGTAATGTT+TGG - chr5.2:56356521-56356540 MS.gene010086:CDS 20.0%
!! TATCGAAATTACAAGTAAAA+AGG - chr5.2:56355791-56355810 MS.gene010086:intron 20.0%
!! TGCAAAAATACAGTAAATTT+CGG + chr5.2:56354029-56354048 None:intergenic 20.0%
!! TTTATACCCTACTATAAATA+GGG + chr5.2:56353079-56353098 None:intergenic 20.0%
!! TTTATTTAATTCCTTTGTCA+GGG - chr5.2:56352744-56352763 MS.gene010086:intron 20.0%
!!! AAGTATTAATTGACTCATTA+GGG - chr5.2:56354415-56354434 MS.gene010086:intron 20.0%
!!! ATTTTTCCTAAAGCAAAAAA+AGG + chr5.2:56356735-56356754 None:intergenic 20.0%
!!! CTATTCTATTAATATTTTGC+AGG - chr5.2:56355920-56355939 MS.gene010086:intron 20.0%
!!! CTTCTTTGTTTTTATCATTT+TGG - chr5.2:56354180-56354199 MS.gene010086:intron 20.0%
!!! GATCATGTTTTAAAAAATCA+TGG - chr5.2:56355581-56355600 MS.gene010086:CDS 20.0%
!!! GTATAAATAGTTTTACAAAG+TGG - chr5.2:56353092-56353111 MS.gene010086:intron 20.0%
!!! GTCATATTAAATTCTGTTTT+TGG + chr5.2:56356650-56356669 None:intergenic 20.0%
!!! TAAGTATTAATTGACTCATT+AGG - chr5.2:56354414-56354433 MS.gene010086:intron 20.0%
!!! TCAATTTGTCCAAATTTTTA+TGG - chr5.2:56356408-56356427 MS.gene010086:CDS 20.0%
!!! TTCTTAATTTTATGTTTTCC+TGG - chr5.2:56352494-56352513 MS.gene010086:intron 20.0%
!!! TTTAAAATATTTGTGAAAGG+TGG - chr5.2:56354850-56354869 MS.gene010086:intron 20.0%
!!! TTTTTTTCAAATTTATGCTC+AGG - chr5.2:56354879-56354898 MS.gene010086:intron 20.0%
! AAAGGCTTTCCATAAAAATT+TGG + chr5.2:56356420-56356439 None:intergenic 25.0%
! AAGATAATTAATGAGGGATA+AGG - chr5.2:56355740-56355759 MS.gene010086:intron 25.0%
! AATATTCAGTAATCCCAAAA+TGG + chr5.2:56356609-56356628 None:intergenic 25.0%
! AATGTGCAAGATAATTAATG+AGG - chr5.2:56355733-56355752 MS.gene010086:intron 25.0%
! AGACAAAAATTGGAATGTAA+AGG - chr5.2:56354788-56354807 MS.gene010086:intron 25.0%
! AGATAAATGTAATGTTTGGT+TGG - chr5.2:56356525-56356544 MS.gene010086:CDS 25.0%
! AGATAATTAATGAGGGATAA+GGG - chr5.2:56355741-56355760 MS.gene010086:intron 25.0%
! AGCAAATCAGTTTCTTTATT+TGG + chr5.2:56353416-56353435 None:intergenic 25.0%
! ATAAAACAACTACAGAAATC+AGG + chr5.2:56355227-56355246 None:intergenic 25.0%
! ATGTGCAAGATAATTAATGA+GGG - chr5.2:56355734-56355753 MS.gene010086:intron 25.0%
! ATTTGAACCCTATTTATAGT+AGG - chr5.2:56353069-56353088 MS.gene010086:intron 25.0%
! CTAACTTGAATTGAAAAATG+TGG - chr5.2:56355609-56355628 MS.gene010086:CDS 25.0%
! CTCAAATGAGAAATTTGAAA+TGG + chr5.2:56352859-56352878 None:intergenic 25.0%
! CTCTATGATGTAATATATAC+AGG - chr5.2:56355875-56355894 MS.gene010086:CDS 25.0%
! CTTAAATTGTAGGTGATATA+TGG - chr5.2:56354672-56354691 MS.gene010086:intron 25.0%
! GAGTTAATTATGCTTTGTAT+TGG - chr5.2:56354062-56354081 MS.gene010086:CDS 25.0%
! GATAAATGTAATGTTTGGTT+GGG - chr5.2:56356526-56356545 MS.gene010086:CDS 25.0%
! GCTTCCAAATAAAATTATTC+TGG - chr5.2:56355059-56355078 MS.gene010086:CDS 25.0%
! GTTAATTATGCTTTGTATTG+GGG - chr5.2:56354064-56354083 MS.gene010086:CDS 25.0%
! TAGAATATATACACTTCACA+AGG + chr5.2:56356449-56356468 None:intergenic 25.0%
! TCTAACAATCAATTGTATTC+AGG - chr5.2:56352946-56352965 MS.gene010086:intron 25.0%
! TCTCATTGTAAGAAATTTCT+TGG + chr5.2:56353661-56353680 None:intergenic 25.0%
! TGGTTAAAACTTATAACTTG+AGG + chr5.2:56352919-56352938 None:intergenic 25.0%
! TGTAGTTAATTGCATGAATA+AGG - chr5.2:56354123-56354142 MS.gene010086:intron 25.0%
! TTATTTATGCAGGATCATTT+GGG - chr5.2:56353940-56353959 MS.gene010086:intron 25.0%
! TTTATTGAGAACAACTTCAA+AGG + chr5.2:56355194-56355213 None:intergenic 25.0%
! TTTATTTATGCAGGATCATT+TGG - chr5.2:56353939-56353958 MS.gene010086:intron 25.0%
! TTTGAACCCTATTTATAGTA+GGG - chr5.2:56353070-56353089 MS.gene010086:intron 25.0%
!! ATACTCCATATGAAACTTTT+GGG + chr5.2:56353249-56353268 None:intergenic 25.0%
!! CAATTAATAACTTACTGACT+TGG - chr5.2:56352678-56352697 MS.gene010086:intron 25.0%
!! GAATAGTGACTTTTACTAAA+AGG + chr5.2:56355906-56355925 None:intergenic 25.0%
!! GCTACCAGAATAATTTTATT+TGG + chr5.2:56355066-56355085 None:intergenic 25.0%
!! TGATGCATTTTTGTTCATTT+AGG - chr5.2:56353036-56353055 MS.gene010086:CDS 25.0%
!! TTCTTTGTATTGCTATTAGT+TGG - chr5.2:56356568-56356587 MS.gene010086:intron 25.0%
!! TTTATAATATCTGACTTGAG+AGG - chr5.2:56355850-56355869 MS.gene010086:CDS 25.0%
!! TTTGAAGAGAATTTTACTTG+TGG - chr5.2:56355102-56355121 MS.gene010086:intron 25.0%
!!! ATAATTTTATTTGGAAGCAG+TGG + chr5.2:56355057-56355076 None:intergenic 25.0%
!!! ATATGGTTTTTTCTCATTGT+AGG - chr5.2:56354689-56354708 MS.gene010086:intron 25.0%
!!! ATCAGATGTTTTAAAATTGC+AGG - chr5.2:56354210-56354229 MS.gene010086:intron 25.0%
!!! CATTATTTAGTTGTTTCTCT+TGG - chr5.2:56356678-56356697 MS.gene010086:intron 25.0%
!!! GTGTATGTCTTTTATTTTCT+TGG - chr5.2:56354512-56354531 MS.gene010086:intron 25.0%
!!! GTTTTATTACCATAGAGATT+CGG - chr5.2:56355240-56355259 MS.gene010086:intron 25.0%
!!! TAATAGTAGTTCTAAACAGT+TGG + chr5.2:56352990-56353009 None:intergenic 25.0%
!!! TGCTTTAGGAAAAATTATCA+TGG - chr5.2:56356740-56356759 MS.gene010086:intron 25.0%
!!! TGTTTACTTGCTTTATTTTC+AGG - chr5.2:56356360-56356379 MS.gene010086:intron 25.0%
AATAAAATATCCAGTCGTCA+TGG + chr5.2:56354157-56354176 None:intergenic 30.0%
ACTAAGGAGAGAGATTAAAA+CGG + chr5.2:56355455-56355474 None:intergenic 30.0%
ACTGAATCTTTACCAACAAA+CGG + chr5.2:56353632-56353651 None:intergenic 30.0%
ATCGAAAAAGACAAGCATTA+AGG + chr5.2:56355360-56355379 None:intergenic 30.0%
ATTGATTGTTAGAAGAACTC+TGG + chr5.2:56352939-56352958 None:intergenic 30.0%
CAAAAGTTTCATATGGAGTA+TGG - chr5.2:56353248-56353267 MS.gene010086:CDS 30.0%
CACATATGCTCCATTAATTA+AGG + chr5.2:56352821-56352840 None:intergenic 30.0%
CACTTCACAAGGATTAAAAA+AGG + chr5.2:56356438-56356457 None:intergenic 30.0%
CAGTATCAAAGAGCTTATAT+GGG + chr5.2:56355551-56355570 None:intergenic 30.0%
CTGAGTTATGCTTCAATTAA+GGG - chr5.2:56354365-56354384 MS.gene010086:CDS 30.0%
GAATGAAGTTTACTAGACAA+TGG + chr5.2:56356802-56356821 None:intergenic 30.0%
TACAATGAGATCATTGCAAA+GGG - chr5.2:56353671-56353690 MS.gene010086:intron 30.0%
TCAATTAAGGGTTGTATTTC+TGG - chr5.2:56354377-56354396 MS.gene010086:CDS 30.0%
TCAGTATCAAAGAGCTTATA+TGG + chr5.2:56355552-56355571 None:intergenic 30.0%
TCTGAGTTATGCTTCAATTA+AGG - chr5.2:56354364-56354383 MS.gene010086:CDS 30.0%
TTACAATGAGATCATTGCAA+AGG - chr5.2:56353670-56353689 MS.gene010086:intron 30.0%
TTATCAAACAAGCTCTTTCT+TGG + chr5.2:56355395-56355414 None:intergenic 30.0%
TTGTGAAGATCAAAGATGAT+AGG - chr5.2:56352410-56352429 MS.gene010086:CDS 30.0%
TTTGATCTTCACAAGAATAG+AGG + chr5.2:56352404-56352423 None:intergenic 30.0%
! AAAATGTGGAGATCATCTTT+TGG - chr5.2:56355623-56355642 MS.gene010086:CDS 30.0%
! AAGTCTGATGTTTACAGTTT+TGG - chr5.2:56356056-56356075 MS.gene010086:intron 30.0%
! AGAAAATCGACTTTATAACC+AGG - chr5.2:56353736-56353755 MS.gene010086:intron 30.0%
! ATTTTTCCTTCTACTTGTGA+AGG - chr5.2:56353557-56353576 MS.gene010086:intron 30.0%
! CACAATGGTTTTCTTATGTA+TGG + chr5.2:56355133-56355152 None:intergenic 30.0%
! CATACTCCATATGAAACTTT+TGG + chr5.2:56353250-56353269 None:intergenic 30.0%
! GAAAATCGACTTTATAACCA+GGG - chr5.2:56353737-56353756 MS.gene010086:intron 30.0%
! GAATTTTGTCTACTTCACAA+TGG + chr5.2:56355148-56355167 None:intergenic 30.0%
! GATAAGAGGGAGTATAAAAT+TGG + chr5.2:56355338-56355357 None:intergenic 30.0%
! GGTTCAAGATTCACATATTT+TGG + chr5.2:56353776-56353795 None:intergenic 30.0%
! TACTCCATATGAAACTTTTG+GGG + chr5.2:56353248-56353267 None:intergenic 30.0%
! TGAGAAATTTGAAATGGAGA+AGG + chr5.2:56352853-56352872 None:intergenic 30.0%
! TTTTCTCATTGTAGGCTAAA+GGG - chr5.2:56354697-56354716 MS.gene010086:intron 30.0%
! TTTTTCTCATTGTAGGCTAA+AGG - chr5.2:56354696-56354715 MS.gene010086:intron 30.0%
!! GAAAGTATTTGCCTTAAATC+TGG + chr5.2:56354922-56354941 None:intergenic 30.0%
!! TACTGCTCTTTTATTTATGC+AGG - chr5.2:56353930-56353949 MS.gene010086:intron 30.0%
!!! AATTTTATTTTCAGCCTGAG+TGG - chr5.2:56355994-56356013 MS.gene010086:intron 30.0%
AGACAAGCATTAAGGATAAG+AGG + chr5.2:56355352-56355371 None:intergenic 35.0%
AGACAGAACAGTAAGATCTA+AGG + chr5.2:56353304-56353323 None:intergenic 35.0%
AGAGCTTATATGGGAAATAG+AGG + chr5.2:56355542-56355561 None:intergenic 35.0%
AGTATGTTGTTGACCTTGTT+GGG - chr5.2:56352767-56352786 MS.gene010086:intron 35.0%
AGTGGTGATCAATAGATTAG+TGG + chr5.2:56355705-56355724 None:intergenic 35.0%
ATCCCTTATGGAATCTTGTT+GGG - chr5.2:56356328-56356347 MS.gene010086:intron 35.0%
ATCTATTGATCACCACTACA+TGG - chr5.2:56355708-56355727 MS.gene010086:CDS 35.0%
ATTAATTAAGGAATCTGGCC+CGG + chr5.2:56352809-56352828 None:intergenic 35.0%
ATTGCCCCAAAAGTTTCATA+TGG - chr5.2:56353241-56353260 MS.gene010086:CDS 35.0%
CAACTATGCTAGCAAAAGAT+GGG + chr5.2:56356898-56356917 None:intergenic 35.0%
CAATTATTTGATGCTGCCTT+GGG - chr5.2:56355274-56355293 MS.gene010086:intron 35.0%
CAATTGTATTCAGGTACGTT+GGG - chr5.2:56352955-56352974 MS.gene010086:intron 35.0%
CATGGTTAATGAGAAGTAAC+AGG + chr5.2:56355170-56355189 None:intergenic 35.0%
CTATTAGTTGGTTGATCAGA+TGG - chr5.2:56356580-56356599 MS.gene010086:intron 35.0%
GAACAGTAAGATCTAAGGAT+AGG + chr5.2:56353299-56353318 None:intergenic 35.0%
GACAAGCATTAAGGATAAGA+GGG + chr5.2:56355351-56355370 None:intergenic 35.0%
GAGAGTTACACACTTATTGA+AGG + chr5.2:56355972-56355991 None:intergenic 35.0%
GAGCTTATATGGGAAATAGA+GGG + chr5.2:56355541-56355560 None:intergenic 35.0%
GATTAAACAAATGTTACGCG+AGG - chr5.2:56354319-56354338 MS.gene010086:intron 35.0%
GCTCCATTAATTAAGGAATC+TGG + chr5.2:56352814-56352833 None:intergenic 35.0%
GTCATGTAATAATGCTTCAG+AGG + chr5.2:56353606-56353625 None:intergenic 35.0%
TAAACAAATTTACCTGGGCA+TGG + chr5.2:56356133-56356152 None:intergenic 35.0%
TAATCTTCATGTGTATGCTC+AGG - chr5.2:56356238-56356257 MS.gene010086:intron 35.0%
TACCAACTTCAGATTCTCTA+AGG - chr5.2:56356705-56356724 MS.gene010086:intron 35.0%
TCAACTATGCTAGCAAAAGA+TGG + chr5.2:56356899-56356918 None:intergenic 35.0%
TCAATTATTTGATGCTGCCT+TGG - chr5.2:56355273-56355292 MS.gene010086:intron 35.0%
TCAATTGTATTCAGGTACGT+TGG - chr5.2:56352954-56352973 MS.gene010086:intron 35.0%
TGACTTTAGCAGCTTCTTTA+TGG + chr5.2:56356924-56356943 None:intergenic 35.0%
TGTCAAAAACCGAATCTCTA+TGG + chr5.2:56355252-56355271 None:intergenic 35.0%
TTACATGACATTCCGTTTGT+TGG - chr5.2:56353617-56353636 MS.gene010086:intron 35.0%
TTCAAGCCAAAAGGAATTAC+AGG + chr5.2:56353500-56353519 None:intergenic 35.0%
TTGTCATCAAAATCTGTTGC+TGG - chr5.2:56354942-56354961 MS.gene010086:intron 35.0%
! AAGGAGCATAAATGAAGTGA+TGG - chr5.2:56353897-56353916 MS.gene010086:intron 35.0%
! ACAAGCTCTTTCTTGGTAAT+TGG + chr5.2:56355388-56355407 None:intergenic 35.0%
! ACCTGTTGGTAGACAAAAAT+TGG - chr5.2:56354778-56354797 MS.gene010086:intron 35.0%
! ATTAGGGTGATTAGTTGCTT+TGG - chr5.2:56354431-56354450 MS.gene010086:intron 35.0%
! GTTGCTACTCAATCTTTTAC+AGG - chr5.2:56353371-56353390 MS.gene010086:intron 35.0%
! TCATTTTGTCATGCACTGTT+TGG + chr5.2:56356185-56356204 None:intergenic 35.0%
! TCCAATTTTTGTCTACCAAC+AGG + chr5.2:56354782-56354801 None:intergenic 35.0%
! TGTTTGGTTGGGCTTAATTT+TGG - chr5.2:56356537-56356556 MS.gene010086:CDS 35.0%
! TTAGGGTGATTAGTTGCTTT+GGG - chr5.2:56354432-56354451 MS.gene010086:intron 35.0%
! TTTTCATGACGATCAGTTGA+AGG - chr5.2:56354264-56354283 MS.gene010086:intron 35.0%
! TTTTTGTCTACCAACAGGTT+TGG + chr5.2:56354777-56354796 None:intergenic 35.0%
!! GATCAGATGGATTCCATTTT+GGG - chr5.2:56356593-56356612 MS.gene010086:intron 35.0%
!! TATGCTCAGGTTGTGATTTT+GGG - chr5.2:56354892-56354911 MS.gene010086:intron 35.0%
!! TGATCAGATGGATTCCATTT+TGG - chr5.2:56356592-56356611 MS.gene010086:intron 35.0%
!! TTATGCTCAGGTTGTGATTT+TGG - chr5.2:56354891-56354910 MS.gene010086:intron 35.0%
!!! ATATGAAACTTTTGGGGCAA+TGG + chr5.2:56353242-56353261 None:intergenic 35.0%
!!! CTATTTTGACGACTTCACTA+AGG + chr5.2:56355471-56355490 None:intergenic 35.0%
!!! GTAATTCCTTTTGGCTTGAA+AGG - chr5.2:56353500-56353519 MS.gene010086:intron 35.0%
!!! TTTTGGGTTGTCCAGATTTA+AGG - chr5.2:56354908-56354927 MS.gene010086:intron 35.0%
AAATGGTATCCAGTCAAAGC+AGG - chr5.2:56353706-56353725 MS.gene010086:intron 40.0%
AACAACATACTCCCTGACAA+AGG + chr5.2:56352758-56352777 None:intergenic 40.0%
AACTGTCAAGGTTAGTGCAA+TGG - chr5.2:56352434-56352453 MS.gene010086:intron 40.0%
AAGATGATAGGCAACTGTCA+AGG - chr5.2:56352422-56352441 MS.gene010086:CDS 40.0%
AAGCCAAAAGGAATTACAGG+TGG + chr5.2:56353497-56353516 None:intergenic 40.0%
AAGGGAAGTTCAGTGGTAAA+TGG - chr5.2:56353689-56353708 MS.gene010086:intron 40.0%
ACATCAGACTTCTCGTTTGT+AGG + chr5.2:56356047-56356066 None:intergenic 40.0%
ACCTTACAACAACCATGGAA+TGG - chr5.2:56356101-56356120 MS.gene010086:intron 40.0%
ACTCTTTCTTGTGTGCTTCA+TGG - chr5.2:56355309-56355328 MS.gene010086:intron 40.0%
AGCCCAACAAGATTCCATAA+GGG + chr5.2:56356333-56356352 None:intergenic 40.0%
AGTTGAAGACTATTGAAGCC+AGG + chr5.2:56352515-56352534 None:intergenic 40.0%
AGTTTCATATGGAGTATGGC+TGG - chr5.2:56353252-56353271 MS.gene010086:CDS 40.0%
CATAAGGGATGCTAATACTG+GGG + chr5.2:56356318-56356337 None:intergenic 40.0%
CATCCCTTATGGAATCTTGT+TGG - chr5.2:56356327-56356346 MS.gene010086:intron 40.0%
CCATAAGGGATGCTAATACT+GGG + chr5.2:56356319-56356338 None:intergenic 40.0%
GAAACACCTTCACAAGTAGA+AGG + chr5.2:56353566-56353585 None:intergenic 40.0%
GACCAACTTCAAAATCTGAC+TGG + chr5.2:56353348-56353367 None:intergenic 40.0%
GAGAACAACTTCAAAGGACA+TGG + chr5.2:56355188-56355207 None:intergenic 40.0%
GAGTATGTTGTTGACCTTGT+TGG - chr5.2:56352766-56352785 MS.gene010086:intron 40.0%
GCAATGGAAAATGAAACGTG+AGG + chr5.2:56353226-56353245 None:intergenic 40.0%
GCTCTTTGATACTGACAATG+TGG - chr5.2:56355557-56355576 MS.gene010086:CDS 40.0%
GGGCCAGATTCCTTAATTAA+TGG - chr5.2:56352808-56352827 MS.gene010086:intron 40.0%
GTAATAATGCTTCAGAGGCT+GGG + chr5.2:56353601-56353620 None:intergenic 40.0%
GTATGTTGTTGACCTTGTTG+GGG - chr5.2:56352768-56352787 MS.gene010086:intron 40.0%
GTTTCATATGGAGTATGGCT+GGG - chr5.2:56353253-56353272 MS.gene010086:CDS 40.0%
TAGTGACCTTACAACAACCA+TGG - chr5.2:56356096-56356115 MS.gene010086:intron 40.0%
TCCATAAGGGATGCTAATAC+TGG + chr5.2:56356320-56356339 None:intergenic 40.0%
TCCATTCCATGGTTGTTGTA+AGG + chr5.2:56356105-56356124 None:intergenic 40.0%
TCTCAAATCTCCAAACCTGT+TGG - chr5.2:56354764-56354783 MS.gene010086:intron 40.0%
TCTTGAACCATCACTAGCAA+TGG - chr5.2:56353787-56353806 MS.gene010086:intron 40.0%
TGGCTTCAATAGTCTTCAAC+TGG - chr5.2:56352514-56352533 MS.gene010086:intron 40.0%
TGTAATAATGCTTCAGAGGC+TGG + chr5.2:56353602-56353621 None:intergenic 40.0%
TTGATGCCTTTCAAGCCAAA+AGG + chr5.2:56353509-56353528 None:intergenic 40.0%
! CAACTTCAGATTCTCTAAGG+AGG - chr5.2:56356708-56356727 MS.gene010086:intron 40.0%
! CAGGTTGAACTTTCACTTCA+CGG - chr5.2:56355939-56355958 MS.gene010086:intron 40.0%
! CTCCTTAGAGAATCTGAAGT+TGG + chr5.2:56356710-56356729 None:intergenic 40.0%
! CTTGCACATTTTCCATGTAG+TGG + chr5.2:56355723-56355742 None:intergenic 40.0%
! GAACCACCTGTAATTCCTTT+TGG - chr5.2:56353491-56353510 MS.gene010086:intron 40.0%
! GGCTAATGTTGCTTCTTTCT+TGG - chr5.2:56352455-56352474 MS.gene010086:intron 40.0%
! GTTGAAGGAGTTTTTACGAG+AGG - chr5.2:56354279-56354298 MS.gene010086:intron 40.0%
! TGCACTGTTTGGAACATTCA+AGG + chr5.2:56356174-56356193 None:intergenic 40.0%
! TTATTTTCAGCCTGAGTGGA+TGG - chr5.2:56355998-56356017 MS.gene010086:intron 40.0%
!! GAGATCATCTTTTGGAGAGT+AGG - chr5.2:56355631-56355650 MS.gene010086:CDS 40.0%
!! GCTTCAGTTGATAAAACTCC+TGG - chr5.2:56353461-56353480 MS.gene010086:intron 40.0%
!! TCAGTTGATAAAACTCCTGG+AGG - chr5.2:56353464-56353483 MS.gene010086:intron 40.0%
!! TCTCATGCTTGCAGTTTTGA+AGG - chr5.2:56353878-56353897 MS.gene010086:intron 40.0%
!! TCTGCTATTCTGAAATGCGA+CGG + chr5.2:56356273-56356292 None:intergenic 40.0%
!!! ACAGTTTTGGTGTCATCATG+TGG - chr5.2:56356069-56356088 MS.gene010086:intron 40.0%
!!! CAGTTTTGGTGTCATCATGT+GGG - chr5.2:56356070-56356089 MS.gene010086:intron 40.0%
!!! GACCAGTCAGATTTTGAAGT+TGG - chr5.2:56353343-56353362 MS.gene010086:intron 40.0%
!!! GGAGGACCTTTTTTTGCTTT+AGG - chr5.2:56356726-56356745 MS.gene010086:intron 40.0%
AAAATCTCAATCGCCCTACG+TGG - chr5.2:56352879-56352898 MS.gene010086:intron 45.0%
AACCATCACTAGCAATGGAC+TGG - chr5.2:56353792-56353811 MS.gene010086:intron 45.0%
ACCAGCGGATGCGTTAAAAA+TGG - chr5.2:56356943-56356962 MS.gene010086:intron 45.0%
AGATATCATGGGATGAGCTG+CGG - chr5.2:56353819-56353838 MS.gene010086:intron 45.0%
AGTGAAATGCACGATCCAAG+GGG - chr5.2:56354584-56354603 MS.gene010086:CDS 45.0%
CAGCCCAACAAGATTCCATA+AGG + chr5.2:56356334-56356353 None:intergenic 45.0%
CAGTGAAATGCACGATCCAA+GGG - chr5.2:56354583-56354602 MS.gene010086:CDS 45.0%
CATTGCAAAGGGAAGTTCAG+TGG - chr5.2:56353682-56353701 MS.gene010086:intron 45.0%
CCAGCGGATGCGTTAAAAAT+GGG - chr5.2:56356944-56356963 MS.gene010086:intron 45.0%
CCCAGTATTAGCATCCCTTA+TGG - chr5.2:56356316-56356335 MS.gene010086:intron 45.0%
CTACTTGTTCCTGCTTTGAC+TGG + chr5.2:56353718-56353737 None:intergenic 45.0%
GTTTATTCCGCCTGATTCAC+CGG - chr5.2:56354552-56354571 MS.gene010086:CDS 45.0%
TATTTCCTGGTTCCCCAACA+AGG + chr5.2:56352783-56352802 None:intergenic 45.0%
TCCAAGGGGAAGATTACGAA+TGG - chr5.2:56354598-56354617 MS.gene010086:CDS 45.0%
TCTTCATGTGTATGCTCAGG+TGG - chr5.2:56356241-56356260 MS.gene010086:intron 45.0%
TTATTTGATGCTGCCTTGGG+TGG - chr5.2:56355277-56355296 MS.gene010086:intron 45.0%
! ATCAAAGAACGCATTGGTGC+TGG - chr5.2:56353842-56353861 MS.gene010086:intron 45.0%
! GACTTTATAACCAGGGTGCT+GGG - chr5.2:56353744-56353763 MS.gene010086:intron 45.0%
! TTTCTTGGTGTGTATCGCAG+AGG - chr5.2:56354527-56354546 MS.gene010086:CDS 45.0%
!! ACTTTATAACCAGGGTGCTG+GGG - chr5.2:56353745-56353764 MS.gene010086:intron 45.0%
!! GGACTGGCTTGAGATATCAT+GGG - chr5.2:56353808-56353827 MS.gene010086:intron 45.0%
!! TGGACTGGCTTGAGATATCA+TGG - chr5.2:56353807-56353826 MS.gene010086:intron 45.0%
!! TATATATATATATATATATC+AGG - chr5.2:56352643-56352662 MS.gene010086:intron 5.0%
AATACTGGGGAGACGTTTGG+AGG + chr5.2:56356305-56356324 None:intergenic 50.0%
AGATGCTGCATCATCCACGT+AGG + chr5.2:56352896-56352915 None:intergenic 50.0%
AGCCAGTCCATTGCTAGTGA+TGG + chr5.2:56353797-56353816 None:intergenic 50.0%
ATACTGGGGAGACGTTTGGA+GGG + chr5.2:56356304-56356323 None:intergenic 50.0%
ATGGCTCCAGAGTTTCTTCG+TGG - chr5.2:56356017-56356036 MS.gene010086:intron 50.0%
CAAAAGATGGGCGATCAGCA+GGG + chr5.2:56356886-56356905 None:intergenic 50.0%
CATATGGAGTATGGCTGGGT+AGG - chr5.2:56353257-56353276 MS.gene010086:CDS 50.0%
CATGTGTATGCTCAGGTGGT+TGG - chr5.2:56356245-56356264 MS.gene010086:intron 50.0%
CCAGTGAAATGCACGATCCA+AGG - chr5.2:56354582-56354601 MS.gene010086:CDS 50.0%
CCTTGGATCGTGCATTTCAC+TGG + chr5.2:56354585-56354604 None:intergenic 50.0%
CGACTTTATAACCAGGGTGC+TGG - chr5.2:56353743-56353762 MS.gene010086:intron 50.0%
CTGATCCATGCCATTCAGCA+CGG + chr5.2:56353974-56353993 None:intergenic 50.0%
CTGCGGATCAAAGAACGCAT+TGG - chr5.2:56353836-56353855 MS.gene010086:intron 50.0%
GAAGCTGCTAAAGTCACCAG+CGG - chr5.2:56356928-56356947 MS.gene010086:intron 50.0%
GAGACGTTTGGAGGGATAGA+AGG + chr5.2:56356296-56356315 None:intergenic 50.0%
GATGCTGCATCATCCACGTA+GGG + chr5.2:56352895-56352914 None:intergenic 50.0%
GCATGGCTAAGTCCATTCCA+TGG + chr5.2:56356116-56356135 None:intergenic 50.0%
GCCATTCGTAATCTTCCCCT+TGG + chr5.2:56354602-56354621 None:intergenic 50.0%
GCGGATGCGTTAAAAATGGG+TGG - chr5.2:56356947-56356966 MS.gene010086:intron 50.0%
GCTAATACTGGGGAGACGTT+TGG + chr5.2:56356308-56356327 None:intergenic 50.0%
GGACAGTATACCGTGCTGAA+TGG - chr5.2:56353961-56353980 MS.gene010086:intron 50.0%
GGGAACCAGGAAATATCACC+GGG - chr5.2:56352788-56352807 MS.gene010086:intron 50.0%
GGGGAACCAGGAAATATCAC+CGG - chr5.2:56352787-56352806 MS.gene010086:intron 50.0%
GGTTCTCCACGAAGAAACTC+TGG + chr5.2:56356026-56356045 None:intergenic 50.0%
GTATACCGTGCTGAATGGCA+TGG - chr5.2:56353966-56353985 MS.gene010086:intron 50.0%
TACCTGCAACCTCGAGCAAT+GGG + chr5.2:56352361-56352380 None:intergenic 50.0%
TCGTGCATTTCACTGGATGC+TGG + chr5.2:56354578-56354597 None:intergenic 50.0%
TTGAGATCCCAGTGCACGAT+CGG + chr5.2:56354750-56354769 None:intergenic 50.0%
! ACAGGTGGTTCTATACCTCC+AGG + chr5.2:56353482-56353501 None:intergenic 50.0%
!! CCCATTTTTAACGCATCCGC+TGG + chr5.2:56356947-56356966 None:intergenic 50.0%
ACCTGCAACCTCGAGCAATG+GGG + chr5.2:56352360-56352379 None:intergenic 55.0%
GAGTGCATGCTTACCACCCA+AGG + chr5.2:56355293-56355312 None:intergenic 55.0%
GCAAAAGATGGGCGATCAGC+AGG + chr5.2:56356887-56356906 None:intergenic 55.0%
GCATTTCACTGGATGCTGGC+CGG + chr5.2:56354574-56354593 None:intergenic 55.0%
GGTTTAGCTGCCATGACGAC+TGG - chr5.2:56354144-56354163 MS.gene010086:intron 55.0%
GTACCTGCAACCTCGAGCAA+TGG + chr5.2:56352362-56352381 None:intergenic 55.0%
GTTGACCTTGTTGGGGAACC+AGG - chr5.2:56352775-56352794 MS.gene010086:intron 55.0%
TCTGGCCCGGTGATATTTCC+TGG + chr5.2:56352796-56352815 None:intergenic 55.0%
TTGGAATATCCCCAGCACCC+TGG + chr5.2:56353757-56353776 None:intergenic 55.0%
! GAATGGACTTAGCCATGCCC+AGG - chr5.2:56356118-56356137 MS.gene010086:intron 55.0%
!! AACTCTGGAGCCATCCACTC+AGG + chr5.2:56356011-56356030 None:intergenic 55.0%
AGATCCCAGTGCACGATCGG+AGG + chr5.2:56354747-56354766 None:intergenic 60.0%
ATGCTGGCCGGTGAATCAGG+CGG + chr5.2:56354562-56354581 None:intergenic 60.0%
CGATCGGAGGCTTCAGACAG+TGG + chr5.2:56354734-56354753 None:intergenic 60.0%
GAAGCCTCCGATCGTGCACT+GGG - chr5.2:56354740-56354759 MS.gene010086:intron 60.0%
TGAAGCCTCCGATCGTGCAC+TGG - chr5.2:56354739-56354758 MS.gene010086:intron 60.0%
TGGATGCTGGCCGGTGAATC+AGG + chr5.2:56354565-56354584 None:intergenic 60.0%
GCCCCATTGCTCGAGGTTGC+AGG - chr5.2:56352356-56352375 MS.gene010086:CDS 65.0%


Chromosome Type Strat End Strand Name
chr5.2 gene 56352354 56356976 56352354 ID=MS.gene010086
chr5.2 mRNA 56352354 56356976 56352354 ID=MS.gene010086.t1;Parent=MS.gene010086
chr5.2 exon 56356948 56356976 56356948 ID=MS.gene010086.t1.exon1;Parent=MS.gene010086.t1
chr5.2 CDS 56356948 56356976 56356948 ID=cds.MS.gene010086.t1;Parent=MS.gene010086.t1
chr5.2 exon 56356363 56356565 56356363 ID=MS.gene010086.t1.exon2;Parent=MS.gene010086.t1
chr5.2 CDS 56356363 56356565 56356363 ID=cds.MS.gene010086.t1;Parent=MS.gene010086.t1
chr5.2 exon 56355845 56355937 56355845 ID=MS.gene010086.t1.exon3;Parent=MS.gene010086.t1
chr5.2 CDS 56355845 56355937 56355845 ID=cds.MS.gene010086.t1;Parent=MS.gene010086.t1
chr5.2 exon 56355467 56355739 56355467 ID=MS.gene010086.t1.exon4;Parent=MS.gene010086.t1
chr5.2 CDS 56355467 56355739 56355467 ID=cds.MS.gene010086.t1;Parent=MS.gene010086.t1
chr5.2 exon 56355338 56355378 56355338 ID=MS.gene010086.t1.exon5;Parent=MS.gene010086.t1
chr5.2 CDS 56355338 56355378 56355338 ID=cds.MS.gene010086.t1;Parent=MS.gene010086.t1
chr5.2 exon 56355030 56355098 56355030 ID=MS.gene010086.t1.exon6;Parent=MS.gene010086.t1
chr5.2 CDS 56355030 56355098 56355030 ID=cds.MS.gene010086.t1;Parent=MS.gene010086.t1
chr5.2 exon 56354521 56354619 56354521 ID=MS.gene010086.t1.exon7;Parent=MS.gene010086.t1
chr5.2 CDS 56354521 56354619 56354521 ID=cds.MS.gene010086.t1;Parent=MS.gene010086.t1
chr5.2 exon 56354362 56354429 56354362 ID=MS.gene010086.t1.exon8;Parent=MS.gene010086.t1
chr5.2 CDS 56354362 56354429 56354362 ID=cds.MS.gene010086.t1;Parent=MS.gene010086.t1
chr5.2 exon 56354032 56354092 56354032 ID=MS.gene010086.t1.exon9;Parent=MS.gene010086.t1
chr5.2 CDS 56354032 56354092 56354032 ID=cds.MS.gene010086.t1;Parent=MS.gene010086.t1
chr5.2 exon 56353191 56353322 56353191 ID=MS.gene010086.t1.exon10;Parent=MS.gene010086.t1
chr5.2 CDS 56353191 56353322 56353191 ID=cds.MS.gene010086.t1;Parent=MS.gene010086.t1
chr5.2 exon 56352976 56353070 56352976 ID=MS.gene010086.t1.exon11;Parent=MS.gene010086.t1
chr5.2 CDS 56352976 56353070 56352976 ID=cds.MS.gene010086.t1;Parent=MS.gene010086.t1
chr5.2 exon 56352354 56352450 56352354 ID=MS.gene010086.t1.exon12;Parent=MS.gene010086.t1
chr5.2 CDS 56352354 56352450 56352354 ID=cds.MS.gene010086.t1;Parent=MS.gene010086.t1
Gene Sequence

>MS.gene010086

ATGCCCCATTGCTCGAGGTTGCAGGTACTGTGCGTCAGATCATCAATCCTCTATTCTTGTGAAGATCAAAGATGATAGGCAACTGTCAAGGTTAGTGCAATGGCTAATGTTGCTTCTTTCTTGGATTCCATCAAGTTTATTTCTTAATTTTATGTTTTCCTGGCTTCAATAGTCTTCAACTGGTTTTAGATTGATAATTTATATGAATCATCATTACATCTCTGTTTAGATTGCTTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATCAGGATTTTGGTTTTGCAATTAATAACTTACTGACTTGGTCGACGATTTTTTAAGTTCACTAATGTTTGTCAAGAACTCAAATTTATTTAATTCCTTTGTCAGGGAGTATGTTGTTGACCTTGTTGGGGAACCAGGAAATATCACCGGGCCAGATTCCTTAATTAATGGAGCATATGTGTCTTCAACACCTTCTCCATTTCAAATTTCTCATTTGAGAAAATCTCAATCGCCCTACGTGGATGATGCAGCATCTCCTCAAGTTATAAGTTTTAACCAGAGTTCTTCTAACAATCAATTGTATTCAGGTACGTTGGGCTTTAACTTCCAACTGTTTAGAACTACTATTATTTCAAGTTTAGCATATATGTTGCATTGATGCATTTTTGTTCATTTAGGTGCATATATTATTTGAACCCTATTTATAGTAGGGTATAAATAGTTTTACAAAGTGGTTTCTTCAGTATGAATTGTACTTCATTTCAAATTATGCAAATTCATACAAACATCACTGTGATGTGCATGTGTAAATTGATCTATTTACATCATCAATCAAGTTTTAGCCTCACGTTTCATTTTCCATTGCCCCAAAAGTTTCATATGGAGTATGGCTGGGTAGGAAGTTTAAGAATGATACCTATCCTTAGATCTTACTGTTCTGTCTTAATAAATTTGAATTGAGAGACCAGTCAGATTTTGAAGTTGGTCTTAGTTGCTACTCAATCTTTTACAGGTCGCGTACAGATAGATCAACCAAATAAAGAAACTGATTTGCTCAAAAATAACAATGACTTGATTTATGCTTCAGTTGATAAAACTCCTGGAGGTATAGAACCACCTGTAATTCCTTTTGGCTTGAAAGGCATCAATATCAATGTGCAAAATTTACGCTACTAAATTTTTCCTTCTACTTGTGAAGGTGTTTCTGAAGCTCTTCGCCCAGCCTCTGAAGCATTATTACATGACATTCCGTTTGTTGGTAAAGATTCAGTTGTAGTCCAAGAAATTTCTTACAATGAGATCATTGCAAAGGGAAGTTCAGTGGTAAATGGTATCCAGTCAAAGCAGGAACAAGTAGAAAATCGACTTTATAACCAGGGTGCTGGGGATATTCCAAAATATGTGAATCTTGAACCATCACTAGCAATGGACTGGCTTGAGATATCATGGGATGAGCTGCGGATCAAAGAACGCATTGGTGCTGGTAAATTTTCTGTTTCTCATGCTTGCAGTTTTGAAGGAGCATAAATGAAGTGATGGCTCTAAACGTTACTGCTCTTTTATTTATGCAGGATCATTTGGGACAGTATACCGTGCTGAATGGCATGGATCAGTAAGCGTTATATTAAGCACTTTCTTCTTCATGCCGAAATTTACTGTATTTTTGCATATATAAGTTCATGAGTTAATTATGCTTTGTATTGGGGTCACAGTCTCTAGTTAAGTCTGTTTGATTGTAGACTTGTAGTTAATTGCATGAATAAGGTTTAGCTGCCATGACGACTGGATATTTTATTACTCTTCTTTGTTTTTATCATTTTGGTGTATTTATCAGATGTTTTAAAATTGCAGGATGTTGCTGTCAAAGTTTTATCAGTTCAGAATTTTCATGACGATCAGTTGAAGGAGTTTTTACGAGAGGTTTGTTTTCCTAGTATTGATTAAACAAATGTTACGCGAGGTATATCTATTTATTGTATAGGATCTGAGTTATGCTTCAATTAAGGGTTGTATTTCTGGCATGCCATTGAATGTAAGTATTAATTGACTCATTAGGGTGATTAGTTGCTTTGGGATAGTGCTGTGTACTTGATCCTTTTCTAAATACAACAAATTTCTTTTGTATAAGATAGTGTATGTCTTTTATTTTCTTGGTGTGTATCGCAGAGGTAGTTTATTCCGCCTGATTCACCGGCCAGCATCCAGTGAAATGCACGATCCAAGGGGAAGATTACGAATGGCTCTAGACGTTGTTTGTACATAACATTATTATTCTTTTGTTACATGAATAACTTAAATTGTAGGTGATATATGGTTTTTTCTCATTGTAGGCTAAAGGGATCAATTATCTCCACTGTCTGAAGCCTCCGATCGTGCACTGGGATCTCAAATCTCCAAACCTGTTGGTAGACAAAAATTGGAATGTAAAGGTATATTGAAACTGACAGAGAATTTGAGTTTCTCAATGTTTTTAAAATATTTGTGAAAGGTGGTGATTATTTTTTTCAAATTTATGCTCAGGTTGTGATTTTGGGTTGTCCAGATTTAAGGCAAATACTTTCTTGTCATCAAAATCTGTTGCTGGAACAGTGAGTCTCTTGAACTCTAGCATGTACATAATCGACAATATACAATCTAGTGTTGAAGTTTTCTTTTAATTAAGTCGCAAGTGATCCACTGCTTCCAAATAAAATTATTCTGGTAGCAATTTCAAGTTTGAATTTTGAAGAGAATTTTACTTGTGGAGTTACCATACATAAGAAAACCATTGTGAAGTAGACAAAATTCCTGTTACTTCTCATTAACCATGTCCTTTGAAGTTGTTCTCAATAAAATGATATAATCCTGATTTCTGTAGTTGTTTTATTACCATAGAGATTCGGTTTTTGACAGTCAATTATTTGATGCTGCCTTGGGTGGTAAGCATGCACTCTTTCTTGTGTGCTTCATGGAAGCCAATTTTATACTCCCTCTTATCCTTAATGCTTGTCTTTTTCGATATTTTCCAATTACCAAGAAAGAGCTTGTTTGATAAAAACATTCTATTATGTGCTCATCTTACTCAACTTCTACCGTTTTAATCTCTCTCCTTAGTGAAGTCGTCAAAATAGTATTCTACTCAATTTGATCTCTCTTTTGAAACACACAACGTTTTTCACCCTCTATTTCCCATATAAGCTCTTTGATACTGACAATGTGGAGATCATGTTTTAAAAAATCATGGAAATACTAACTTGAATTGAAAAATGTGGAGATCATCTTTTGGAGAGTAGGCGTAGCATAATAAATTCATCTCTAATATTTTCGATTATCTATTGATCACCACTAATCTATTGATCACCACTACATGGAAAATGTGCAAGATAATTAATGAGGGATAAGGGAAGAGTTAACAAAGTAAAATCTTAAACTATCGAAATTACAAGTAAAAAGGAGAAAATCTAAATAACGACTAAATGGAACAAAGTATTTTATAATATCTGACTTGAGAGGTTCTCTATGATGTAATATATACAGGAAAATCCTTTTAGTAAAAGTCACTATTCTATTAATATTTTGCAGGTTGAACTTTCACTTCACGGCTACTCACCTTCAATAAGTGTGTAACTCTCTTAATTTTATTTTCAGCCTGAGTGGATGGCTCCAGAGTTTCTTCGTGGAGAACCTACAAACGAGAAGTCTGATGTTTACAGTTTTGGTGTCATCATGTGGGAACTAGTGACCTTACAACAACCATGGAATGGACTTAGCCATGCCCAGGTAAATTTGTTTAGTAATTATTTGAGTCTGACCTTGAATGTTCCAAACAGTGCATGACAAAATGAAATTTGCAATGTTTACAAGTGAATTTTGTAAAATAATCTTCATGTGTATGCTCAGGTGGTTGGAGCCGTCGCATTTCAGAATAGCAGACCTTCTATCCCTCCAAACGTCTCCCCAGTATTAGCATCCCTTATGGAATCTTGTTGGGCTGAGTAAGTGTTTACTTGCTTTATTTTCAGGCAGTTTTCAATATGCTCACACATCGTCAATTTGTCCAAATTTTTATGGAAAGCCTTTTTTAATCCTTGTGAAGTGTATATATTCTAATGTAGGATAGCCTTTCTAATAAATTATGAATTCTGGATGAAGCTTTGCGTAGTTTAGATAAATGTAATGTTTGGTTGGGCTTAATTTTGGTTTTGCACTTCTTTGTATTGCTATTAGTTGGTTGATCAGATGGATTCCATTTTGGGATTACTGAATATTGAATTAGCAACAATAAAACCAAAAACAGAATTTAATATGACTGATAACTCATTATTTAGTTGTTTCTCTTGGATCTTACCAACTTCAGATTCTCTAAGGAGGACCTTTTTTTGCTTTAGGAAAAATTATCATGGTTTACATTTATATTTTGTATTGAATGCTTTATGTTTCCATTGTCTAGTAAACTTCATTCTTTCTATACACATTTTGTAGCATAGATTCATTTCTGATGCTTGATAATTTTTTTGCAGTAACCCTGCTGATCGCCCATCTTTTGCTAGCATAGTTGAGACCATAAAGAAGCTGCTAAAGTCACCAGCGGATGCGTTAAAAATGGGTGGAACATAA
Protein sequence

>MS.gene010086.t1

MPHCSRLQVLEYVVDLVGEPGNITGPDSLINGAYVSSTPSPFQISHLRKSQSPYVDDAASPQVISFNQSSSNNQLYSGRVQIDQPNKETDLLKNNNDLIYASVDKTPGALRPASEALLHDIPFVGKDSVVVQEISYNEIIAKGSSVVNGIQSKQEQVENRLYNQGAGDIPKYVNLEPSLAMDWLEISWDELRIKERIGAGSFGTVYRAEWHGSDVAVKVLSVQNFHDDQLKEFLREAKGINYLHCLKPPIVHWDLKSPNLLVDKNWNVKVVILGCPDLRQILSCHQNLLLEHCFITIEIRFLTVNYLMLPWVPEWMAPEFLRGEPTNEKSDVYSFGVIMWELVTLQQPWNGLSHAQVVGAVAFQNSRPSIPPNVSPVLASLMESCWADNPADRPSFASIVETIKKLLKSPADALKMGGT