AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene010125

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene010125.t1 MTR_5g065440 95.539 269 6 3 1 264 1 268 0.0 524
MS.gene010125.t1 MTR_3g100650 59.107 291 75 7 1 264 1 274 2.27e-96 284
MS.gene010125.t1 MTR_5g032600 52.294 218 74 7 55 264 77 272 2.34e-56 182
MS.gene010125.t1 MTR_4g134580 41.700 247 94 6 55 263 112 346 6.43e-51 171
MS.gene010125.t1 MTR_1g077020 41.509 212 92 5 53 263 6 186 7.43e-48 157
MS.gene010125.t1 MTR_2g076780 40.724 221 97 5 56 263 37 236 9.95e-47 156
MS.gene010125.t1 MTR_7g010300 40.724 221 98 6 53 263 85 282 1.70e-44 153
MS.gene010125.t1 MTR_5g020510 39.819 221 106 6 51 263 94 295 4.66e-44 151
MS.gene010125.t1 MTR_8g069080 42.326 215 103 7 55 263 68 267 1.23e-43 149
MS.gene010125.t1 MTR_6g012280 42.857 210 102 5 56 263 91 284 1.16e-40 143
MS.gene010125.t1 MTR_7g070643 80.263 76 12 1 19 94 48 120 2.17e-35 125
MS.gene010125.t1 MTR_6g080300 86.885 61 8 0 34 94 32 92 1.91e-31 112
MS.gene010125.t1 MTR_8g069380 47.872 94 49 0 171 264 22 115 3.02e-22 89.0
MS.gene010125.t1 MTR_8g051480 54.667 75 33 1 189 263 55 128 1.65e-20 84.7
MS.gene010125.t1 MTR_3g039810 57.534 73 24 2 54 126 18 83 1.94e-20 83.6
MS.gene010125.t1 MTR_6g073013 53.333 60 27 1 201 259 101 160 1.77e-16 75.5
MS.gene010125.t1 MTR_6g073013 56.000 50 21 1 56 104 19 68 1.99e-11 61.6
MS.gene010125.t1 MTR_6g012220 56.604 53 19 1 52 104 17 65 6.50e-13 63.2
MS.gene010125.t1 MTR_2g007810 100.000 29 0 0 66 94 19 47 7.36e-13 63.5
MS.gene010125.t1 MTR_8g467340 54.545 55 23 1 53 105 61 115 1.49e-12 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene010125.t1 AT4G24660 48.120 266 90 7 1 264 1 220 1.31e-66 206
MS.gene010125.t1 AT4G24660 47.727 264 86 8 1 260 1 216 1.23e-63 199
MS.gene010125.t1 AT2G02540 38.868 265 123 7 15 263 43 284 2.05e-58 188
MS.gene010125.t1 AT2G02540 38.868 265 123 7 15 263 43 284 2.05e-58 188
MS.gene010125.t1 AT1G14440 40.654 214 102 4 54 263 88 280 5.07e-52 172
MS.gene010125.t1 AT1G14440 40.654 214 102 4 54 263 88 280 5.07e-52 172
MS.gene010125.t1 AT5G65410 43.439 221 90 3 47 264 66 254 3.27e-50 166
MS.gene010125.t1 AT2G18350 41.981 212 90 4 54 263 80 260 1.82e-47 159
MS.gene010125.t1 AT1G75240 40.693 231 118 2 53 264 73 303 5.94e-47 159
MS.gene010125.t1 AT3G50890 40.566 212 94 3 55 262 59 242 1.38e-43 148
MS.gene010125.t1 AT1G69600 40.376 213 95 5 54 260 29 215 6.21e-38 134
MS.gene010125.t1 AT5G15210 36.530 219 93 5 51 257 51 235 8.26e-37 131
MS.gene010125.t1 AT5G39760 36.667 210 128 2 56 263 56 262 8.04e-36 130
MS.gene010125.t1 AT3G28920 36.916 214 116 4 54 260 50 251 3.28e-35 128
MS.gene010125.t1 AT5G60480 38.164 207 89 7 53 257 34 203 1.05e-30 114
MS.gene010125.t1 AT1G74660 67.647 68 20 1 52 119 35 100 1.56e-24 94.7
MS.gene010125.t1 AT1G74660 70.492 61 18 0 52 112 35 95 1.75e-24 94.4
MS.gene010125.t1 AT3G28917 65.217 69 21 2 53 120 30 96 1.32e-23 92.0
MS.gene010125.t1 AT1G18835 63.793 58 18 1 54 111 24 78 5.48e-19 79.7
MS.gene010125.t1 AT5G42780 36.232 69 44 0 192 260 170 238 5.62e-11 61.6
MS.gene010125.t1 AT5G42780 57.692 52 18 2 56 106 64 112 7.59e-11 61.2

Find 82 sgRNAs with CRISPR-Local

Find 84 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGCACTGGTGTTTGTGTTTC+TGG 0.083748 5.2:-55657234 None:intergenic
AGAGAAATGTTCTTAAAGTT+TGG 0.256503 5.2:+55657931 MS.gene010125:CDS
GCTCTCCCTGCAGCTGCTTC+CGG 0.322915 5.2:+55657687 MS.gene010125:CDS
GGTGGTGGTGGTAGCGGTGG+TGG 0.325308 5.2:+55657768 MS.gene010125:CDS
CCTGCAGCTGCTTCCGGTGG+TGG 0.348678 5.2:+55657693 MS.gene010125:CDS
TTCGGTGGCCACGCTGTTGA+TGG 0.368956 5.2:+55657396 MS.gene010125:CDS
GGAGGTGGTGGTGGTAGCGG+TGG 0.371127 5.2:+55657765 MS.gene010125:CDS
GGAGGAGGTGGTGGTGGTAG+CGG 0.383614 5.2:+55657762 MS.gene010125:CDS
TCTCCTTGCGGTGGAAGTTC+CGG 0.388446 5.2:-55657491 None:intergenic
GTGGAGGTGGTGGCTGTGAC+CGG 0.391995 5.2:-55657542 None:intergenic
TGGTATTGCGGCGGTGGAGG+TGG 0.407593 5.2:-55657555 None:intergenic
CCACCACCGGAAGCAGCTGC+AGG 0.423625 5.2:-55657693 None:intergenic
TGATGGTATTGCGGCGGTGG+AGG 0.428238 5.2:-55657558 None:intergenic
AAGAATCACGCCGTTAGCTT+CGG 0.428386 5.2:+55657378 MS.gene010125:CDS
TTTATCGCTGCCGGTGAAGA+AGG 0.429195 5.2:+55657429 MS.gene010125:CDS
TGGTGATGGTATTGCGGCGG+TGG 0.436665 5.2:-55657561 None:intergenic
GGTGGTGGTAGCGGTGGTGG+TGG 0.439608 5.2:+55657771 MS.gene010125:CDS
AGTAGCGGTGGAGGAGGTGG+TGG 0.442867 5.2:+55657753 MS.gene010125:CDS
TATTGCGGCGGTGGAGGTGG+TGG 0.444382 5.2:-55657552 None:intergenic
AGCAGTAGCGGTGGAGGAGG+TGG 0.444551 5.2:+55657750 MS.gene010125:CDS
CACAATAACAAGAACACTCT+TGG 0.453033 5.2:+55657957 MS.gene010125:CDS
GGAGGAGCACGGTGGTAGTA+AGG 0.453304 5.2:-55657600 None:intergenic
CGTGATTCTTCTGACATTCT+CGG 0.457636 5.2:-55657365 None:intergenic
CCTCCTCCACCGCTACTGCT+AGG 0.470793 5.2:-55657747 None:intergenic
AAACTCACCGTTGGAGTTGA+CGG 0.483943 5.2:+55657297 MS.gene010125:CDS
AGCGGTGGAGGAGGTGGTGG+TGG 0.484419 5.2:+55657756 MS.gene010125:CDS
TGATGAACAAGAAGAGGAGA+TGG 0.485060 5.2:+55657206 MS.gene010125:CDS
GTAGCGGTGGTGGTGGATCA+AGG 0.485672 5.2:+55657778 MS.gene010125:CDS
AAACGGTTAGTTCATGTAAC+CGG 0.491216 5.2:+55657523 MS.gene010125:CDS
GGAACAGAAAGAGAAGTTGC+TGG 0.492529 5.2:+55657827 MS.gene010125:CDS
AACGGTCTGTGATGTGCCAC+CGG 0.497928 5.2:-55657663 None:intergenic
ATGATGATGGTGAAGGTAAC+CGG 0.500422 5.2:-55657631 None:intergenic
CAAGGAGATCGATGGTGAAA+CGG 0.502038 5.2:+55657506 MS.gene010125:CDS
TTCAAGTGTTCCTTCTTCAC+CGG 0.506613 5.2:-55657439 None:intergenic
CGTGCTCCTCCTTCCACAGC+CGG 0.511664 5.2:+55657612 MS.gene010125:CDS
TTCTCTGCTCATTCCACCAC+CGG 0.513977 5.2:-55657706 None:intergenic
AACCCTAGCAGTAGCGGTGG+AGG 0.514729 5.2:+55657744 MS.gene010125:CDS
CTGGCGTTTGCTGAAGAACA+TGG 0.519626 5.2:+55657846 MS.gene010125:CDS
CTCCTCCACCGCTACTGCTA+GGG 0.520409 5.2:-55657746 None:intergenic
ATGGTGAAGGTAACCGGCTG+TGG 0.521317 5.2:-55657625 None:intergenic
CCATCATCATCTTGCAACTC+CGG 0.527038 5.2:+55657644 MS.gene010125:CDS
CTCCCTGCAGCTGCTTCCGG+TGG 0.528838 5.2:+55657690 MS.gene010125:CDS
AATCACGCCGTTAGCTTCGG+TGG 0.536570 5.2:+55657381 MS.gene010125:CDS
GAGTCATAACTCGTTGGCAC+TGG 0.537593 5.2:-55657249 None:intergenic
GTGCCGCTTGTAACTGTCAC+CGG 0.539615 5.2:+55657472 MS.gene010125:CDS
CCTAGCAGTAGCGGTGGAGG+AGG 0.539653 5.2:+55657747 MS.gene010125:CDS
GGAATTTGATGAACAAGAAG+AGG 0.540959 5.2:+55657200 MS.gene010125:CDS
CACCATCGATCTCCTTGCGG+TGG 0.556188 5.2:-55657500 None:intergenic
GCAGCTGCAGGGAGAGCCAA+CGG 0.558422 5.2:-55657681 None:intergenic
TGAAGGTAACCGGCTGTGGA+AGG 0.577589 5.2:-55657621 None:intergenic
CACCACCGGAAGCAGCTGCA+GGG 0.578947 5.2:-55657692 None:intergenic
CGTTTGCTGAAGAACATGGT+TGG 0.579649 5.2:+55657850 MS.gene010125:CDS
TCACGTTCAAAACTCACCGT+TGG 0.581295 5.2:+55657288 MS.gene010125:CDS
AGAATTGATTGCTGTGGTGA+TGG 0.582941 5.2:-55657575 None:intergenic
TTTCCTTCCGTCAACTCCAA+CGG 0.588914 5.2:-55657304 None:intergenic
CCGGAGTTGCAAGATGATGA+TGG 0.603279 5.2:-55657644 None:intergenic
GTTGGAGTTGACGGAAGGAA+AGG 0.610107 5.2:+55657306 MS.gene010125:CDS
TGTTGCGAGTTTATCGCTGC+CGG 0.610223 5.2:+55657420 MS.gene010125:CDS
CCAACGAGTTATGACTCACT+TGG 0.611073 5.2:+55657255 MS.gene010125:CDS
AGGTAACCGGCTGTGGAAGG+AGG 0.612370 5.2:-55657618 None:intergenic
GGTGGCACATCACAGACCGT+TGG 0.612785 5.2:+55657665 MS.gene010125:CDS
ATTCAGAACAAAATTCACTC+AGG 0.624697 5.2:+55657806 MS.gene010125:CDS
TTGCTGTGGTGATGGTATTG+CGG 0.630881 5.2:-55657567 None:intergenic
TCACCGGAACTTCCACCGCA+AGG 0.633282 5.2:+55657488 MS.gene010125:CDS
ATATCAAACCCTAGCAGTAG+CGG 0.637238 5.2:+55657738 MS.gene010125:CDS
TCAAACCCTAGCAGTAGCGG+TGG 0.637366 5.2:+55657741 MS.gene010125:CDS
GGAAGGAAAGGTAACGGCAA+CGG 0.639375 5.2:+55657318 MS.gene010125:CDS
TCACCGTTGGAGTTGACGGA+AGG 0.640977 5.2:+55657301 MS.gene010125:CDS
TTCCACCGCAAGGAGATCGA+TGG 0.642395 5.2:+55657498 MS.gene010125:CDS
CCAAGTGAGTCATAACTCGT+TGG 0.644449 5.2:-55657255 None:intergenic
TCATCATCTTGCAACTCCGG+TGG 0.648426 5.2:+55657647 MS.gene010125:CDS
GTTGACGGAAGGAAAGGTAA+CGG 0.669388 5.2:+55657312 MS.gene010125:CDS
TTTCACCATCGATCTCCTTG+CGG 0.669478 5.2:-55657503 None:intergenic
CGGCTGTGGAAGGAGGAGCA+CGG 0.673027 5.2:-55657611 None:intergenic
TTGCAAGATGATGATGGTGA+AGG 0.675327 5.2:-55657638 None:intergenic
AGCGTGGCCACCGAAGCTAA+CGG 0.680090 5.2:-55657388 None:intergenic
CTGTGGTGATGGTATTGCGG+CGG 0.691893 5.2:-55657564 None:intergenic
AGGAAAGGTAACGGCAACGG+CGG 0.697533 5.2:+55657321 MS.gene010125:CDS
GTTCCGGTGACAGTTACAAG+CGG 0.708583 5.2:-55657475 None:intergenic
CGCAACAACCATCAACAGCG+TGG 0.714369 5.2:-55657404 None:intergenic
AAGGCGAGAATTGATTGCTG+TGG 0.722344 5.2:-55657581 None:intergenic
CTGTGGAAGGAGGAGCACGG+TGG 0.754237 5.2:-55657608 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! AGAGAAATGTTCTTAAAGTT+TGG + chr5.2:55657931-55657950 MS.gene010125:CDS 25.0%
ATTCAGAACAAAATTCACTC+AGG + chr5.2:55657806-55657825 MS.gene010125:CDS 30.0%
CACAATAACAAGAACACTCT+TGG + chr5.2:55657957-55657976 MS.gene010125:CDS 35.0%
GGAATTTGATGAACAAGAAG+AGG + chr5.2:55657200-55657219 MS.gene010125:CDS 35.0%
! AAACGGTTAGTTCATGTAAC+CGG + chr5.2:55657523-55657542 MS.gene010125:CDS 35.0%
AGAATTGATTGCTGTGGTGA+TGG - chr5.2:55657578-55657597 None:intergenic 40.0%
ATATCAAACCCTAGCAGTAG+CGG + chr5.2:55657738-55657757 MS.gene010125:CDS 40.0%
CGTGATTCTTCTGACATTCT+CGG - chr5.2:55657368-55657387 None:intergenic 40.0%
TGATGAACAAGAAGAGGAGA+TGG + chr5.2:55657206-55657225 MS.gene010125:CDS 40.0%
TTCAAGTGTTCCTTCTTCAC+CGG - chr5.2:55657442-55657461 None:intergenic 40.0%
!! ATGATGATGGTGAAGGTAAC+CGG - chr5.2:55657634-55657653 None:intergenic 40.0%
!! TTGCAAGATGATGATGGTGA+AGG - chr5.2:55657641-55657660 None:intergenic 40.0%
AAACTCACCGTTGGAGTTGA+CGG + chr5.2:55657297-55657316 MS.gene010125:CDS 45.0%
AAGGCGAGAATTGATTGCTG+TGG - chr5.2:55657584-55657603 None:intergenic 45.0%
CAAGGAGATCGATGGTGAAA+CGG + chr5.2:55657506-55657525 MS.gene010125:CDS 45.0%
CCAACGAGTTATGACTCACT+TGG + chr5.2:55657255-55657274 MS.gene010125:CDS 45.0%
CCAAGTGAGTCATAACTCGT+TGG - chr5.2:55657258-55657277 None:intergenic 45.0%
CCATCATCATCTTGCAACTC+CGG + chr5.2:55657644-55657663 MS.gene010125:CDS 45.0%
GGAACAGAAAGAGAAGTTGC+TGG + chr5.2:55657827-55657846 MS.gene010125:CDS 45.0%
GTTGACGGAAGGAAAGGTAA+CGG + chr5.2:55657312-55657331 MS.gene010125:CDS 45.0%
TCACGTTCAAAACTCACCGT+TGG + chr5.2:55657288-55657307 MS.gene010125:CDS 45.0%
TTTCACCATCGATCTCCTTG+CGG - chr5.2:55657506-55657525 None:intergenic 45.0%
TTTCCTTCCGTCAACTCCAA+CGG - chr5.2:55657307-55657326 None:intergenic 45.0%
! AAGAATCACGCCGTTAGCTT+CGG + chr5.2:55657378-55657397 MS.gene010125:CDS 45.0%
! CGTTTGCTGAAGAACATGGT+TGG + chr5.2:55657850-55657869 MS.gene010125:CDS 45.0%
!! TTGCTGTGGTGATGGTATTG+CGG - chr5.2:55657570-55657589 None:intergenic 45.0%
CCGGAGTTGCAAGATGATGA+TGG - chr5.2:55657647-55657666 None:intergenic 50.0%
GAGTCATAACTCGTTGGCAC+TGG - chr5.2:55657252-55657271 None:intergenic 50.0%
GTTCCGGTGACAGTTACAAG+CGG - chr5.2:55657478-55657497 None:intergenic 50.0%
GTTGGAGTTGACGGAAGGAA+AGG + chr5.2:55657306-55657325 MS.gene010125:CDS 50.0%
TCATCATCTTGCAACTCCGG+TGG + chr5.2:55657647-55657666 MS.gene010125:CDS 50.0%
TGTTGCGAGTTTATCGCTGC+CGG + chr5.2:55657420-55657439 MS.gene010125:CDS 50.0%
TTCTCTGCTCATTCCACCAC+CGG - chr5.2:55657709-55657728 None:intergenic 50.0%
TTTATCGCTGCCGGTGAAGA+AGG + chr5.2:55657429-55657448 MS.gene010125:CDS 50.0%
! CTGGCGTTTGCTGAAGAACA+TGG + chr5.2:55657846-55657865 MS.gene010125:CDS 50.0%
! GGAAGGAAAGGTAACGGCAA+CGG + chr5.2:55657318-55657337 MS.gene010125:CDS 50.0%
!! GGCACTGGTGTTTGTGTTTC+TGG - chr5.2:55657237-55657256 None:intergenic 50.0%
AACGGTCTGTGATGTGCCAC+CGG - chr5.2:55657666-55657685 None:intergenic 55.0%
ATGGTGAAGGTAACCGGCTG+TGG - chr5.2:55657628-55657647 None:intergenic 55.0%
CGCAACAACCATCAACAGCG+TGG - chr5.2:55657407-55657426 None:intergenic 55.0%
TCAAACCCTAGCAGTAGCGG+TGG + chr5.2:55657741-55657760 MS.gene010125:CDS 55.0%
TCACCGTTGGAGTTGACGGA+AGG + chr5.2:55657301-55657320 MS.gene010125:CDS 55.0%
TCTCCTTGCGGTGGAAGTTC+CGG - chr5.2:55657494-55657513 None:intergenic 55.0%
TGAAGGTAACCGGCTGTGGA+AGG - chr5.2:55657624-55657643 None:intergenic 55.0%
TTCCACCGCAAGGAGATCGA+TGG + chr5.2:55657498-55657517 MS.gene010125:CDS 55.0%
! AATCACGCCGTTAGCTTCGG+TGG + chr5.2:55657381-55657400 MS.gene010125:CDS 55.0%
! AGGAAAGGTAACGGCAACGG+CGG + chr5.2:55657321-55657340 MS.gene010125:CDS 55.0%
! CAACGGCGGTTTTGCTTCGA+CGG + chr5.2:55657335-55657354 MS.gene010125:CDS 55.0%
!! CTGTGGTGATGGTATTGCGG+CGG - chr5.2:55657567-55657586 None:intergenic 55.0%
!! GTGCCGCTTGTAACTGTCAC+CGG + chr5.2:55657472-55657491 MS.gene010125:CDS 55.0%
AACCCTAGCAGTAGCGGTGG+AGG + chr5.2:55657744-55657763 MS.gene010125:CDS 60.0%
AGCGTGGCCACCGAAGCTAA+CGG - chr5.2:55657391-55657410 None:intergenic 60.0%
AGGTAACCGGCTGTGGAAGG+AGG - chr5.2:55657621-55657640 None:intergenic 60.0%
CACCATCGATCTCCTTGCGG+TGG - chr5.2:55657503-55657522 None:intergenic 60.0%
CTCCTCCACCGCTACTGCTA+GGG - chr5.2:55657749-55657768 None:intergenic 60.0%
GGTGGCACATCACAGACCGT+TGG + chr5.2:55657665-55657684 MS.gene010125:CDS 60.0%
TCACCGGAACTTCCACCGCA+AGG + chr5.2:55657488-55657507 MS.gene010125:CDS 60.0%
TGATGGTATTGCGGCGGTGG+AGG - chr5.2:55657561-55657580 None:intergenic 60.0%
TTCGGTGGCCACGCTGTTGA+TGG + chr5.2:55657396-55657415 MS.gene010125:CDS 60.0%
! GCGGTTTTGCTTCGACGGTG+AGG + chr5.2:55657340-55657359 MS.gene010125:CDS 60.0%
! GGAGGAGCACGGTGGTAGTA+AGG - chr5.2:55657603-55657622 None:intergenic 60.0%
!! GTAGCGGTGGTGGTGGATCA+AGG + chr5.2:55657778-55657797 MS.gene010125:CDS 60.0%
!! TGGTGATGGTATTGCGGCGG+TGG - chr5.2:55657564-55657583 None:intergenic 60.0%
AGCAGTAGCGGTGGAGGAGG+TGG + chr5.2:55657750-55657769 MS.gene010125:CDS 65.0%
AGTAGCGGTGGAGGAGGTGG+TGG + chr5.2:55657753-55657772 MS.gene010125:CDS 65.0%
CACCACCGGAAGCAGCTGCA+GGG - chr5.2:55657695-55657714 None:intergenic 65.0%
CCTAGCAGTAGCGGTGGAGG+AGG + chr5.2:55657747-55657766 MS.gene010125:CDS 65.0%
CCTCCTCCACCGCTACTGCT+AGG - chr5.2:55657750-55657769 None:intergenic 65.0%
CGGCTGTGGAAGGAGGAGCA+CGG - chr5.2:55657614-55657633 None:intergenic 65.0%
CGTGCTCCTCCTTCCACAGC+CGG + chr5.2:55657612-55657631 MS.gene010125:CDS 65.0%
GCAGCTGCAGGGAGAGCCAA+CGG - chr5.2:55657684-55657703 None:intergenic 65.0%
GCTCTCCCTGCAGCTGCTTC+CGG + chr5.2:55657687-55657706 MS.gene010125:CDS 65.0%
TATTGCGGCGGTGGAGGTGG+TGG - chr5.2:55657555-55657574 None:intergenic 65.0%
TGGTATTGCGGCGGTGGAGG+TGG - chr5.2:55657558-55657577 None:intergenic 65.0%
! CTGTGGAAGGAGGAGCACGG+TGG - chr5.2:55657611-55657630 None:intergenic 65.0%
! GTGGAGGTGGTGGCTGTGAC+CGG - chr5.2:55657545-55657564 None:intergenic 65.0%
!! GGAGGAGGTGGTGGTGGTAG+CGG + chr5.2:55657762-55657781 MS.gene010125:CDS 65.0%
CCACCACCGGAAGCAGCTGC+AGG - chr5.2:55657696-55657715 None:intergenic 70.0%
CCTGCAGCTGCTTCCGGTGG+TGG + chr5.2:55657693-55657712 MS.gene010125:CDS 70.0%
CTCCCTGCAGCTGCTTCCGG+TGG + chr5.2:55657690-55657709 MS.gene010125:CDS 70.0%
! AGCGGTGGAGGAGGTGGTGG+TGG + chr5.2:55657756-55657775 MS.gene010125:CDS 70.0%
!! GGAGGTGGTGGTGGTAGCGG+TGG + chr5.2:55657765-55657784 MS.gene010125:CDS 70.0%
!! GGTGGTGGTAGCGGTGGTGG+TGG + chr5.2:55657771-55657790 MS.gene010125:CDS 70.0%
!! GGTGGTGGTGGTAGCGGTGG+TGG + chr5.2:55657768-55657787 MS.gene010125:CDS 70.0%


Chromosome Type Strat End Strand Name
chr5.2 gene 55657198 55657992 55657198 ID=MS.gene010125
chr5.2 mRNA 55657198 55657992 55657198 ID=MS.gene010125.t1;Parent=MS.gene010125
chr5.2 exon 55657198 55657992 55657198 ID=MS.gene010125.t1.exon1;Parent=MS.gene010125.t1
chr5.2 CDS 55657198 55657992 55657198 ID=cds.MS.gene010125.t1;Parent=MS.gene010125.t1
Gene Sequence

>MS.gene010125

ATGGAATTTGATGAACAAGAAGAGGAGATGGAGATTCCAGAAACACAAACACCAGTGCCAACGAGTTATGACTCACTTGGTAACTCAGCTTCACGTTCAAAACTCACCGTTGGAGTTGACGGAAGGAAAGGTAACGGCAACGGCGGTTTTGCTTCGACGGTGAGGTACCGAGAATGTCAGAAGAATCACGCCGTTAGCTTCGGTGGCCACGCTGTTGATGGTTGTTGCGAGTTTATCGCTGCCGGTGAAGAAGGAACACTTGAAGCTGTTATTTGTGCCGCTTGTAACTGTCACCGGAACTTCCACCGCAAGGAGATCGATGGTGAAACGGTTAGTTCATGTAACCGGTCACAGCCACCACCTCCACCGCCGCAATACCATCACCACAGCAATCAATTCTCGCCTTACTACCACCGTGCTCCTCCTTCCACAGCCGGTTACCTTCACCATCATCATCTTGCAACTCCGGTGGCACATCACAGACCGTTGGCTCTCCCTGCAGCTGCTTCCGGTGGTGGAATGAGCAGAGAAGATGATGATATATCAAACCCTAGCAGTAGCGGTGGAGGAGGTGGTGGTGGTAGCGGTGGTGGTGGATCAAGGAAGAGATTCAGAACAAAATTCACTCAGGAACAGAAAGAGAAGTTGCTGGCGTTTGCTGAAGAACATGGTTGGAGAATTCAGAAACAAGATGAAGCTGCTATAGAACAGTTTTGTGCTGAGAATTGTATCAAGAGAAATGTTCTTAAAGTTTGGATGCACAATAACAAGAACACTCTTGGTAAGAAACCCTAA
Protein sequence

>MS.gene010125.t1

MEFDEQEEEMEIPETQTPVPTSYDSLGNSASRSKLTVGVDGRKGNGNGGFASTVRYRECQKNHAVSFGGHAVDGCCEFIAAGEEGTLEAVICAACNCHRNFHRKEIDGETVSSCNRSQPPPPPPQYHHHSNQFSPYYHRAPPSTAGYLHHHHLATPVAHHRPLALPAAASGGGMSREDDDISNPSSSGGGGGGGSGGGGSRKRFRTKFTQEQKEKLLAFAEEHGWRIQKQDEAAIEQFCAENCIKRNVLKVWMHNNKNTLGKKP